Tan0021005 (gene) Snake gourd v1

Overview


Name	Tan0021005
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Reverse transcriptase domain-containing protein
Location	LG08: 9035014 .. 9037831 (+)
RNA-Seq Expression	Tan0021005
Synteny	Tan0021005

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATCGTTAGAAGGTTGGTAGTGGACATCAAATCAGCATCAGGGAGGATCCATGGTTGTTGGCGGAAGGATGGGATAAACCCCTCTGGGTGGATCCAAACTTGATAGACCTGAATGTGTGCAATTTGCTTTGAGACGATGGATTTTGGGACAAAGATAAGATATATGAGCATTTTAATCAGGACGATGCAAATCACATTCTCTCAATCCCGCGAACTGGAGATCTGACCACTGACGAAATTGTTTGGAAGTTCACCACGAAAGGGGTCTTTTCGGTCAAGAGTGGCTACCATTTAGGTATGAGCGTTAGAGCTCATAATGAAGCTTCAAGTTCGAACAACTCCTTAACAAGACAAATGTGGAAGTCAATATGGAGTACGCCTATTCCAAACAAGATCAAGATTTGTTACTGGAAGATCATTCACGACATTCTCCCGACTCGAGCTAATTTTTTATGGAAGGGCATCATCATGAACCCAGTCTGTCCATTCTGTCTAAAAAAGACGGAGATGAGCAATCATCTCTTTTGAGGTTGCAAGGTATCTGCTAAATTTTGGGATCTTTTTTTTACCTGCTACCTCTGTTTTGTTTTATGATTGCAGGGATGTTTGGAGCGCAGTGGATGAAGGGAAAACGAGTCCCGCAGCGGAAGCGATTGTGAATCGCGCGCTCTTGATTTAGTTACAACGATTTAATTCATGAACGTAAACAACTAGATTAAGCATAAAACAGAATGGACAACAAGAAATATTACCTTTGAAGAACCTTTCTTCAAGTGCTTCTCTCTCCCACGATCACGATCTCAGTTACTGGAACACGAACGGACGAAGACACGACCATTGGATCTTCTCCGTTGTTCTTTAGGTGAGGGAGGAATGTGGGTTCCCTTTATGAGAGGTGAGGTATTTTGTGAGAGAGATGTGTGTTTTGGAACCCTTCCAATAGCACAACAAAAGCTTGAAAAAAATATCACCTAGTTGCATCTCATGCAACCATATATATAGGGAAATAGGATGGAAATGACCATCCTACCCCTCCTTTAATCTCTCTTTAGTATATAGTTTATATGTGAATCTAATTCACATTAAAATTATATATTATATTAATTATATCGTATATAATTGATATAACACCTCAGGTATGAAATTGAACACTTCAATTTCATTCCTAACTTTATACCCTCAATATTACCATGTTGAGCCAACGGAGGGACCTAATGGACCTATAGTTCATGAGCTCCAATGATATGAGATTAACTGATCAAACTCTTTGATCTAGTTAATCAATATTCATTAACTACAAGTCACTCCACTATAGACTTGTAGCTGCACTCTCCTCACTGTAGATAATATTGTGTCCACTGATATAGTCATTACCCATGAGTCGACCCTTCACAGGTTGTTCGTAATCACGGCTGGGTCAAATTACCGTTTTACCCCTGTGATTATCTCTTTGCTCCTTAAGCACCATTGATCCTCTAATGAACAACAAGTCTAAGGTCATACCTTAGACTCATACCCTCATAGAGGGCGGGGCCCCGTTGTTCAAGACCCGGAGTCAGTTCTTAAGCGAACAACCTATCTAATTCCTTAGTGTAGGAATGAGTGAGTTCCATCTTGCACAATTAAGTTCCCAGCTACCTACGAGGTTCTGTCCCTGAGAAGGTAGGCTTATTGAGTCGGCTACAAGCCACTCTCACCCATACTAGTCTAAGGACAAACCCCATGCGGGGAGTTCTTAACTTGCTTAGATCGAGTCAAGTCACTAATGACCATCTATAAATTACTAGTCTTATCCTCATTAACGATTACATTGGTTAGACTAATAATTTGCGATCTGGTCTTGTATGAACTCTTCATACAGGATGCCCCCACTCTCATGTCAACTACATGAATGAGTTGGATTACCTCATTTGTACTAATTACAAAGTGGGTTGCATCCACGGTGTTACCAGAATGAGGTTTCCAACCTTATTCTTATACCATAAACCATTTAGGTTATATTCTTGAACACAATCTAAATAGTGTCCACTACACTGATGTTCAAGATATATGTTATAACCTTGGAGGTTCGTTTATTGGATTTATAAATCAAGATTGTAATTCTATCAAAACAAATAACCTTTTATTTAATTGATCAAAATTACACAAGTTTAGGGCATAAATCCCAACAGTGGATTATTTCTGTTAGATGCTGGATAGGCATAACCGTATGGACCAAGCGTTGTTCATGATAATTCTTTAGAAGATTTGGTCATGTCGGAATGTTTTGTTACATAAACAAGATAGTCTTGACTGGGAAAGGGTGTTCCTTAACACACAACTCCAATTTCAGGAGTTCACTCAGTCTGAGGCAACTAGGATCCAAGTTCCCAACCATATGACAACAACGATGGAAGCTTGGGAGTCGCCGGATGAGGGTTGGTGGAAATTAAATATTGATGCATCCTGATGCTCAACTACCAATCACGGGGGCGTAGGTTGAATCTTACGGGATTGGACAGGGAGGATAGTGCGTGCAGGGCATCACCATATCACAGACAGTTGACCAATCACCATTTTGGAACTTTATGGTATTCTCAAGAGTTTGGATTTCATTCAGGAGTACAATATACCTCTCTTGGTGGAATCTGACTCTTGAGAGGCTATACGACTTATCAACGGTGTTGACAATAATCGAACAGAGACAAGAGACTTTGCGAGGAAGATCAGGCAACGAGCAACTTCTTGGGCCATCATTTCTTTTCGCCACAATAGTCGGGAGACAAATATGGGCGCTCACAAACTCGCACAACGAGAAAAACACCTTCAGGTAG

mRNA sequence

ATGGCTATCGTTGGTAGTGGACATCAAATCAGCATCAGGGAGGATCCATGGTTGTTGGCGGAAGGATGGGATAAACCCCTCTGGGTGGATCCAAACTTGATAGACCTGAATGACGATGCAAATCACATTCTCTCAATCCCGCGAACTGGAGATCTGACCACTGACGAAATTGTTTGGAAGTTCACCACGAAAGGGGTCTTTTCGGTCAAGAGTGGCTACCATTTAGGTATGAGCGTTAGAGCTCATAATGAAGCTTCAAGTTCGAACAACTCCTTAACAAGACAAATGTGGAAGTCAATATGGAGTACGCCTATTCCAAACAAGATCAAGATTTGTTACTGGAAGATCATTCACGACATTCTCCCGACTCGAGCTAATTTTTTATGGAAGGGCATCATCATGAACCCAAAGATTTGGTCATGTCGGAATGTTTTGTTACATAAACAAGATAGTCTTGACTGGGAAAGGGTGTTCCTTAACACACAACTCCAATTTCAGGAGTTCACTCAGTCTGAGGCAACTAGGATCCAAGTTCCCAACCATATGACAACAACGATGGAAGCTTGGGAGTCGCCGGATGAGGGTTGGAGTACAATATACCTCTCTTGGTGGAATCTGACTCTTGAGAGGCTATACGACTTATCAACGGTGTTGACAATAATCGAACAGAGACAAGAGACTTTGCGAGGAAGATCAGGCAACGAGCAACTTCTTGGGCCATCATTTCTTTTCGCCACAATAGTCGGGAGACAAATATGGGCGCTCACAAACTCGCACAACGAGAAAAACACCTTCAGGTAG

Coding sequence (CDS)

ATGGCTATCGTTGGTAGTGGACATCAAATCAGCATCAGGGAGGATCCATGGTTGTTGGCGGAAGGATGGGATAAACCCCTCTGGGTGGATCCAAACTTGATAGACCTGAATGACGATGCAAATCACATTCTCTCAATCCCGCGAACTGGAGATCTGACCACTGACGAAATTGTTTGGAAGTTCACCACGAAAGGGGTCTTTTCGGTCAAGAGTGGCTACCATTTAGGTATGAGCGTTAGAGCTCATAATGAAGCTTCAAGTTCGAACAACTCCTTAACAAGACAAATGTGGAAGTCAATATGGAGTACGCCTATTCCAAACAAGATCAAGATTTGTTACTGGAAGATCATTCACGACATTCTCCCGACTCGAGCTAATTTTTTATGGAAGGGCATCATCATGAACCCAAAGATTTGGTCATGTCGGAATGTTTTGTTACATAAACAAGATAGTCTTGACTGGGAAAGGGTGTTCCTTAACACACAACTCCAATTTCAGGAGTTCACTCAGTCTGAGGCAACTAGGATCCAAGTTCCCAACCATATGACAACAACGATGGAAGCTTGGGAGTCGCCGGATGAGGGTTGGAGTACAATATACCTCTCTTGGTGGAATCTGACTCTTGAGAGGCTATACGACTTATCAACGGTGTTGACAATAATCGAACAGAGACAAGAGACTTTGCGAGGAAGATCAGGCAACGAGCAACTTCTTGGGCCATCATTTCTTTTCGCCACAATAGTCGGGAGACAAATATGGGCGCTCACAAACTCGCACAACGAGAAAAACACCTTCAGGTAG

Protein sequence

MAIVGSGHQISIREDPWLLAEGWDKPLWVDPNLIDLNDDANHILSIPRTGDLTTDEIVWKFTTKGVFSVKSGYHLGMSVRAHNEASSSNNSLTRQMWKSIWSTPIPNKIKICYWKIIHDILPTRANFLWKGIIMNPKIWSCRNVLLHKQDSLDWERVFLNTQLQFQEFTQSEATRIQVPNHMTTTMEAWESPDEGWSTIYLSWWNLTLERLYDLSTVLTIIEQRQETLRGRSGNEQLLGPSFLFATIVGRQIWALTNSHNEKNTFR

Homology

[Close]

BLAST of Tan0021005 vs. NCBI nr
Match: KAF4394198.1 (hypothetical protein F8388_005832 [Cannabis sativa])

HSP 1 Score: 92.4 bits (228), Expect = 6.2e-15
Identity = 66/224 (29.46%), Postives = 97/224 (43.30%), Query Frame = 0


Query: 4   VGSGHQISIREDPWLLAEGWDKPLWV------------------DPNLIDL-----NDDA 63
           VG G  ISI  D W+   G+ K  ++                  + NL  L     +D+ 
Sbjct: 26  VGDGTTISIFNDAWI--PGYGKLHYLRHNSDVYTTVANLLTPTKEWNLTSLQNTFPSDNC 85

Query: 64  NHILSIPRTGDLTTDEIVWKFTTKGVFSVKSGYHLGMSVRAHNEASSSNNSLTRQMWKSI 123
             IL+IP T   T D   W FT  G ++V SGYH   +   HN+ +SSN++ ++  WK +
Sbjct: 86  QAILTIPLTNIGTPDSYFWSFTPHGTYTVSSGYHQAHTQLHHNDPASSNSTASQDWWKQM 145

Query: 124 WSTPIPNKIKICYWKIIHDILPTRANFLWKGIIMNPK----------------------- 182
           W+ P+P K+K   W+  HDILPT  N   + I+ +                         
Sbjct: 146 WTLPLPPKLKHFLWRTCHDILPTSHNLFKRKILPSSSCCRCLYHDETLEHAPFRCPAVQG 205

[Close]

BLAST of Tan0021005 vs. NCBI nr
Match: KAF4404563.1 (hypothetical protein G4B88_005949 [Cannabis sativa])

HSP 1 Score: 92.4 bits (228), Expect = 6.2e-15
Identity = 66/224 (29.46%), Postives = 97/224 (43.30%), Query Frame = 0


Query: 4   VGSGHQISIREDPWLLAEGWDKPLWV------------------DPNLIDL-----NDDA 63
           VG G  ISI  D W+   G+ K  ++                  + NL  L     +D+ 
Sbjct: 156 VGDGTTISIFNDAWI--PGYGKLHYLRHNSDVYTTVANLLTPTKEWNLTSLQNTFPSDNC 215

Query: 64  NHILSIPRTGDLTTDEIVWKFTTKGVFSVKSGYHLGMSVRAHNEASSSNNSLTRQMWKSI 123
             IL+IP T   T D   W FT  G ++V SGYH   +   HN+ +SSN++ ++  WK +
Sbjct: 216 QAILTIPLTNIGTPDSYFWSFTPHGTYTVSSGYHQAHTQLHHNDPASSNSTASQDWWKQM 275

Query: 124 WSTPIPNKIKICYWKIIHDILPTRANFLWKGIIMNPK----------------------- 182
           W+ P+P K+K   W+  HDILPT  N   + I+ +                         
Sbjct: 276 WTLPLPPKLKHFLWRTCHDILPTSHNLFKRKILPSSSCCRCLYHDETLEHAPFRCPAVQG 335

[Close]

BLAST of Tan0021005 vs. NCBI nr
Match: XP_023899813.1 (uncharacterized protein LOC112011695 [Quercus suber])

HSP 1 Score: 91.3 bits (225), Expect = 1.4e-14
Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 40  ANHILSIPRTGDLTTDEIVWKFTTKGVFSVKSGYHLGMSVRAH-NEASSSNNSLTRQMWK 99
           A+ I SIP +  L TD+++W  T  G F+V+S YHL M+  +  +  SSSNNS  +  W 
Sbjct: 810 ADIIKSIPISSRLPTDKLIWTETRNGQFTVRSAYHLAMNRSSSISGGSSSNNSTLKCFWN 869

Query: 100 SIWSTPIPNKIKICYWKIIHDILPTRANFLWKGIIMNPKIWSCR 143
            IWS P+P+KI+   W++ HD LPT++N L + +I      SCR
Sbjct: 870 KIWSIPVPHKIRHFAWRVCHDALPTKSNLLRRKVIQEDLCKSCR 913

[Close]

BLAST of Tan0021005 vs. NCBI nr
Match: PNY15111.1 (ribonuclease H [Trifolium pratense])

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-14
Identity = 49/155 (31.61%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 4    VGSGHQISIREDPWL--------------LAEGWDKPLWVDPNLIDLN----------DD 63
            +G+G  + IRED WL              L  G      +DP+    N          D+
Sbjct: 901  IGNGESVKIREDRWLPNQVGFKVWSRGEELENGALVSALIDPDTKQWNRQLVVQTFYPDE 960

Query: 64   ANHILSIPRTGDLTTDEIVWKFTTKGVFSVKSGYHLGMSVRAHN--EASSSNNSLTRQMW 123
            A  ILSIP +  L  D+I+W +   G +SV+S +HL   ++ HN  + ++S+      +W
Sbjct: 961  AKQILSIPISQRLPADKIIWHYERDGEYSVRSAHHL---LKQHNSRDVAASSGQQMNNLW 1020

Query: 124  KSIWSTPIPNKIKICYWKIIHDILPTRANFLWKGI 133
            + IW  P+PN+++   W++  +ILPTRAN + KG+
Sbjct: 1021 REIWKAPVPNRVRNFLWRLGKNILPTRANLVRKGV 1052

[Close]

BLAST of Tan0021005 vs. NCBI nr
Match: VVA38592.1 (PREDICTED: reverse mRNAase, partial [Prunus dulcis])

HSP 1 Score: 89.4 bits (220), Expect = 5.2e-14
Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 32  NLIDLNDDANHILSIPRTGDLTTDEIVWKFTTKGVFSVKSGYHLGMSVRAHNE-ASSSNN 91
           N + L  D   I+ IP +     D IVW +   G+F+VKS Y + + V + +E  SSS+N
Sbjct: 595 NNLFLPVDVVDIVRIPLSIRAPPDRIVWNYDKHGLFTVKSAYRVALRVTSGDEDESSSSN 654

Query: 92  SLTRQMWKSIWSTPIPNKIKICYWKIIHDILPTRANFLWKGIIMNPKIWSCRNV 145
           S T  +W+ IW+  +P K+KI  W++ HDILPT+AN + KG+ M      C ++
Sbjct: 655 SDTSMLWRHIWNANVPTKLKIFAWRVAHDILPTKANLIKKGVDMQDMCMFCGDI 708

[Close]

BLAST of Tan0021005 vs. ExPASy TrEMBL
Match: A0A2N9J7E4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61034 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.6e-16
Identity = 62/193 (32.12%), Postives = 89/193 (46.11%), Query Frame = 0


Query: 4    VGSGHQISIREDPWLLAEGWDKPLWVDPNLIDLNDDANHILSIPRTGDLTTDEIVWKFTT 63
            VG+G++I I+   WLL EG  + L     LIDL  DA  IL IP +  +  D+I W    
Sbjct: 1292 VGNGNRIPIKGSNWLLDEGHRRVL---SPLIDLPTDARTILKIPLSERVQEDKIFWFDNR 1351

Query: 64   KGVFSVKSGYHLGMSVRAHNEASSSNNSLTRQMWKSIWSTPIPNKIKICYWKIIHDILPT 123
             G +SV+SGY L +      +A SS       +WK IW   +P KIK   W+  HD LPT
Sbjct: 1352 DGKYSVRSGYKLLLKDARAFQAESSRQWDPDPLWKRIWGARVPAKIKSFLWRACHDSLPT 1411

Query: 124  RANFLWKGIIMNP--------------KIWSCRNVLLHKQDSLDWERVFLNTQLQFQEF- 180
             +    + ++ NP               +W+ RN   H   S  + +++   Q+  QE+ 
Sbjct: 1412 NSGLFQRKVLPNPLCGLCLSQQKLTCWLLWNKRNHDRHHPPSDQYSQIWTRAQIVLQEYL 1471

[Close]

BLAST of Tan0021005 vs. ExPASy TrEMBL
Match: A0A2N9IJM4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52367 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-15
Identity = 74/236 (31.36%), Postives = 106/236 (44.92%), Query Frame = 0


Query: 4   VGSGHQISIREDPWLLAEGWDKPLWVDP-----------NLID---------------LN 63
           VGSG +I I ED WL     + P  V P           NLI+               L 
Sbjct: 647 VGSGKRIRIWEDSWLPIR--EHPSIVSPRPPHTSLTHVSNLIEEHSNTWKEGIIKSSFLP 706

Query: 64  DDANHILSIPRTGDLTTDEIVWKFTTKGVFSVKSGYHLGMSVRAHNEASSSNNSLTRQMW 123
           ++A  IL IP +     D  VW  T  G++SV+SGYH+ +S  + +   SS+ S   Q+W
Sbjct: 707 NEAEAILGIPLSSMHPKDTAVWSGTKNGIYSVRSGYHVLLSEGSRDCPGSSDISFETQVW 766

Query: 124 KSIWSTPIPNKIKICYWKIIHDILPTRANFLWKGIIMNPKIWSCRNV---LLH-----KQ 183
            +IWS  IP K++   W+  H+ LPTR N  ++ +I +P+  +C  V   +LH     KQ
Sbjct: 767 NAIWSLKIPAKVRHFLWRACHEALPTRTNLHFRHVIPDPRCANCNEVNETVLHALWQCKQ 826

Query: 184 -----DSLDWERVFLNTQ-LQFQE-FTQSEAT--RIQVPNHMTTTMEAWESPDEGW 197
                 ++ W    L  Q L F E F    AT    ++    TTT   W   +  W
Sbjct: 827 IREIWIAVPWSSSMLQNQYLNFMELFHHCHATLPATELQLFATTTWLIWHQRNRQW 880

[Close]

BLAST of Tan0021005 vs. ExPASy TrEMBL
Match: A0A2N9ED81 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS466 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-15
Identity = 74/236 (31.36%), Postives = 106/236 (44.92%), Query Frame = 0


Query: 4   VGSGHQISIREDPWLLAEGWDKPLWVDP-----------NLID---------------LN 63
           VGSG +I I ED WL     + P  V P           NLI+               L 
Sbjct: 282 VGSGKRIRIWEDSWLPIR--EHPSIVSPRPPHTSLTHVSNLIEEHSNTWKEGIIKSSFLP 341

Query: 64  DDANHILSIPRTGDLTTDEIVWKFTTKGVFSVKSGYHLGMSVRAHNEASSSNNSLTRQMW 123
           ++A  IL IP +     D  VW  T  G++SV+SGYH+ +S  + +   SS+ S   Q+W
Sbjct: 342 NEAEAILGIPLSSMHPKDTAVWSGTKNGIYSVRSGYHVLLSEGSRDCPGSSDISFETQVW 401

Query: 124 KSIWSTPIPNKIKICYWKIIHDILPTRANFLWKGIIMNPKIWSCRNV---LLH-----KQ 183
            +IWS  IP K++   W+  H+ LPTR N  ++ +I +P+  +C  V   +LH     KQ
Sbjct: 402 NAIWSLKIPAKVRHFLWRACHEALPTRTNLHFRHVIPDPRCANCNEVNETVLHALWQCKQ 461

Query: 184 -----DSLDWERVFLNTQ-LQFQE-FTQSEAT--RIQVPNHMTTTMEAWESPDEGW 197
                 ++ W    L  Q L F E F    AT    ++    TTT   W   +  W
Sbjct: 462 IREIWIAVPWSSSMLQNQYLNFMELFHHCHATLPATELQLFATTTWLIWHQRNRQW 515

[Close]

BLAST of Tan0021005 vs. ExPASy TrEMBL
Match: A0A7J6IAE7 (zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_005949 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.0e-15
Identity = 66/224 (29.46%), Postives = 97/224 (43.30%), Query Frame = 0


Query: 4   VGSGHQISIREDPWLLAEGWDKPLWV------------------DPNLIDL-----NDDA 63
           VG G  ISI  D W+   G+ K  ++                  + NL  L     +D+ 
Sbjct: 156 VGDGTTISIFNDAWI--PGYGKLHYLRHNSDVYTTVANLLTPTKEWNLTSLQNTFPSDNC 215

Query: 64  NHILSIPRTGDLTTDEIVWKFTTKGVFSVKSGYHLGMSVRAHNEASSSNNSLTRQMWKSI 123
             IL+IP T   T D   W FT  G ++V SGYH   +   HN+ +SSN++ ++  WK +
Sbjct: 216 QAILTIPLTNIGTPDSYFWSFTPHGTYTVSSGYHQAHTQLHHNDPASSNSTASQDWWKQM 275

Query: 124 WSTPIPNKIKICYWKIIHDILPTRANFLWKGIIMNPK----------------------- 182
           W+ P+P K+K   W+  HDILPT  N   + I+ +                         
Sbjct: 276 WTLPLPPKLKHFLWRTCHDILPTSHNLFKRKILPSSSCCRCLYHDETLEHAPFRCPAVQG 335

[Close]

BLAST of Tan0021005 vs. ExPASy TrEMBL
Match: A0A7J6HHM0 (zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_005832 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.0e-15
Identity = 66/224 (29.46%), Postives = 97/224 (43.30%), Query Frame = 0


Query: 4   VGSGHQISIREDPWLLAEGWDKPLWV------------------DPNLIDL-----NDDA 63
           VG G  ISI  D W+   G+ K  ++                  + NL  L     +D+ 
Sbjct: 26  VGDGTTISIFNDAWI--PGYGKLHYLRHNSDVYTTVANLLTPTKEWNLTSLQNTFPSDNC 85

Query: 64  NHILSIPRTGDLTTDEIVWKFTTKGVFSVKSGYHLGMSVRAHNEASSSNNSLTRQMWKSI 123
             IL+IP T   T D   W FT  G ++V SGYH   +   HN+ +SSN++ ++  WK +
Sbjct: 86  QAILTIPLTNIGTPDSYFWSFTPHGTYTVSSGYHQAHTQLHHNDPASSNSTASQDWWKQM 145

Query: 124 WSTPIPNKIKICYWKIIHDILPTRANFLWKGIIMNPK----------------------- 182
           W+ P+P K+K   W+  HDILPT  N   + I+ +                         
Sbjct: 146 WTLPLPPKLKHFLWRTCHDILPTSHNLFKRKILPSSSCCRCLYHDETLEHAPFRCPAVQG 205

[Close]

BLAST of Tan0021005 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 7.3e-06
Identity = 33/121 (27.27%), Postives = 53/121 (43.80%), Query Frame = 0


Query: 28  WVDPNLIDLNDDANH--ILSIPRTGDLTTDEIVWKFTTKGVFSVKSGYHL-----GMSVR 87
           W D  +    D ++H  I  I        D+I+W + T G ++V+SGY L       ++ 
Sbjct: 88  WDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIP 147

Query: 88  AHNEASSSNNSLTRQMWKSIWSTPIPNKIKICYWKIIHDILPTRANFLWKGIIMNPKIWS 142
           A N    S +  TR     IW+ PI  K+K   W+ +   L T      +G+ ++P    
Sbjct: 148 AINPPHGSIDLKTR-----IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPR 203

The following BLAST results are available for this feature:

BLAST of Tan0021005 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0021005 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF4394198.1	6.2e-15	29.46	hypothetical protein F8388_005832 [Cannabis sativa]	[more]
KAF4404563.1	6.2e-15	29.46	hypothetical protein G4B88_005949 [Cannabis sativa]	[more]
XP_023899813.1	1.4e-14	42.31	uncharacterized protein LOC112011695 [Quercus suber]	[more]
PNY15111.1	2.3e-14	31.61	ribonuclease H [Trifolium pratense]	[more]
VVA38592.1	5.2e-14	38.60	PREDICTED: reverse mRNAase, partial [Prunus dulcis]	[more]

BLAST of Tan0021005 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9J7E4	4.6e-16	32.12	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61034 PE=4 SV=1	[more]
A0A2N9IJM4	2.3e-15	31.36	RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52367 ...	[more]
A0A2N9ED81	2.3e-15	31.36	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS466 PE=4 SV=1	[more]
A0A7J6IAE7	3.0e-15	29.46	zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_005949 PE=4...	[more]
A0A7J6HHM0	3.0e-15	29.46	zf-RVT domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_005832 PE=4...	[more]

BLAST of Tan0021005 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09510.1	7.3e-06	27.27	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 67..143 e-value: 3.7E-7 score: 30.7
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 37..148
None	No IPR available	PANTHER	PTHR46736:SF6	SUBFAMILY NOT NAMED	coord: 37..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0021005.1	Tan0021005.1	mRNA