Tan0020855 (gene) Snake gourd v1

Overview


Name	Tan0020855
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Heavy metal transport/detoxification superfamily protein
Location	LG08: 1621906 .. 1624522 (+)
RNA-Seq Expression	Tan0020855
Synteny	Tan0020855

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCTTCTCAGTTCTCACACTCCCAAACAATATAAATCTCGCTTTTTGTTAAGGACAGAAATCAGAGAAGAGAGAGAGAGAGCTTTGGGAATGGGAAAACGGGTGGGAATTGGGAAAGTTCTAGAGTGTTTCTTAAATACAAGAGCTTCGAGTTCGTGTTTGTGCATGGAAATTGAAGACAAATTTGATCAGAAAGAGCCATTAATACCCAAACAAACTACATCTCAGCTTCTCAGATTGAAGGATGTGGTTTCTCATCAAAACCATACGCTCGCTCTTCAGTTAAAGCCCAAGGTCAGATTAATTCCGCATTCCCCCTTTTTTTGTGTATTAATTCTATTTATATTAAAATTTAAAATTATTAGATTATTGTTGATATAATTAAATTAATTACCATAACCTATTAGGTTAAAATTTTGGAATGATTGGGGATATAATATGCTATCGTTTGCCTTCCCTCTCTTCTCTGCTTCTCATCTTCTGTCTTCTCACTTTTGTCATGACATCGACAACTTCTTACTCCTCTTTTCAACCACAACCTACAAATTCGTATTTTTTCTTGTTGTTGTCAGAGTAAAAGGTTATGTGTTCGAACTCTTATGAAATTGCTTCCTCCTTCAATTAATATTGATTCTACTTGTTTGTCTTTTATTCAAATTTCTAAGTCAACAAGTGAGAGAGAGTGTTAGACCAGTGTTGATAAAATTAAATTTATCCTAACTTATTGAATTAACCTTTTGGGTTGAATGATGTTTTAACAAAAACTTTATTTTGATTACTATTTGTTTTTTTTTTTAAGTTTCTATATTTTTCTTAGATGCTTATTTTAGAGAATTAAGTCTATTTTAGTTTGGAGAGTTGAAATTTATTTCCTTTTAGTTCATAAATTTTCAAAAAGGAATTACTTGAGTTCTTATCTAGTATTCTATCTTTTATTCTGCTCAACAAATTGATAACATGGTTTCAAATCTGAATGTGTATTGAATACAAGTTGACGTAGACATTTACTAAAGTCATATTTGTTGGTTGAAGTTGGGTGTTTAAATGAGATATTGATGACATGATAATGACACGAATCAAATGTAATTTTTTAAAAAATATTAATACTAAAATGGACACATTTTGAAAGTTTAAAATCAAAATGGAGAATATATGAAAGTTTATGAATCTACCGTGCAATTAATTTTAAAACTAACGAAACCAGTTGGGTGGTCTAAAATTAATTATTTAAGAAGAAGAAAAAATTACAATCGTGTTTGATTAACATGTTATTTATTTGAATCTTTTGATTACTACACATTTTTCAAATCATATCCAAATTTCACTTTAAAAAAAATAGAAAAACCCTTTATAGCACCTTTTTTTTTTTAATTAAATAAATAAAGTGCCGCACACACATGTGTATATTTATTTATTTCTTTTTGGGCTACTTTTGAGTTTTGTGAATGACTCAAAAAAATGTCAGGTGGTGGTGCTGAGGGTGTCCATGCATTGTAATGGCTGTGCCAGAAAGGTTGAGAAGCACATCTCCAAGATGGAAGGTAAATTTTTTGACCTATTAATAACTTCTTTTTTTTAAAAAAAAACATTTTTTGTTTAATGTGTAAAATTATGACTGGTTACATTATTGTTTTTGGCTCAGTTAATGATTGTAAAATAACATTGGTTTAAACTCTGTTGTACCATACATTTTGTTTTCATACCATTTTGATTCACATTTCTATTTTAATCTTCAAATATTAGGCCAGCATATGATTAAAATATTATGTTGGTCTCTATGCTTTAAATCATTTTATTTTAATTCGTGTAGTTTCAAATATCTAAATCTAATTTATATACTTTTATTAAATATTAAAATTAGTCCTAGATCTAATTTATATACTTTTATTAAATATTAAAATTAGTCCTAGTTTAATGTTAATTTTTATTCAATTTAATAAAATAATAATGATAATAATTTTCTTTGAAGAAAAACTCCAATAAACTGTATACTGAAAAGCCTAATATAACAATTTTTTAAAGTCAATTATAAACTAATAATATGCATTGATTTTAATTTACTTAGAAGTAGATTAAATTTAGACATTTAAAAACACAAAGACTATAATTTTTAAAAAAATCAAAATATAGGAACAAAATGATATTTAACACTAAAAAGACCGTTTTATTTTTGTAATCAATTGTGCAATAAGTATCTTTGAAACCACATGCCACAAGCTATACGTTGGAGATGAAAAAAAATATTTATGGTTAAATAATTAATAAATAATGAGGTTTAAAATAGTTTTTTATACAATAATATTGAAGGATTAAGACACGAGAATAATTAAAATTGAGAAAATAAAATATAATATTTGAAAGTTTATAAACTTCCAAAATAGATTTTAAATCAATAATATATTATAATAAATATCCAATCAACACTTTTTTTTTACTGTTTTCAGGCGTGGATTCATATGAGGTAGATTTGGAAAGGAAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTTCTGCAATGCGTTTCTAAAGTGAAAAGTGCAGAGATTTGGGAGCCACAAGACTGAACATAATTATTTTTCCAGATCCAATTACAAACTCAATAATTCAG

mRNA sequence

CTTTCTTCTCAGTTCTCACACTCCCAAACAATATAAATCTCGCTTTTTGTTAAGGACAGAAATCAGAGAAGAGAGAGAGAGAGCTTTGGGAATGGGAAAACGGGTGGGAATTGGGAAAGTTCTAGAGTGTTTCTTAAATACAAGAGCTTCGAGTTCGTGTTTGTGCATGGAAATTGAAGACAAATTTGATCAGAAAGAGCCATTAATACCCAAACAAACTACATCTCAGCTTCTCAGATTGAAGGATGTGGTTTCTCATCAAAACCATACGCTCGCTCTTCAGTTAAAGCCCAAGGTGGTGGTGCTGAGGGTGTCCATGCATTGTAATGGCTGTGCCAGAAAGGTTGAGAAGCACATCTCCAAGATGGAAGGCGTGGATTCATATGAGGTAGATTTGGAAAGGAAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTTCTGCAATGCGTTTCTAAAGTGAAAAGTGCAGAGATTTGGGAGCCACAAGACTGAACATAATTATTTTTCCAGATCCAATTACAAACTCAATAATTCAG

Coding sequence (CDS)

ATGGGAAAACGGGTGGGAATTGGGAAAGTTCTAGAGTGTTTCTTAAATACAAGAGCTTCGAGTTCGTGTTTGTGCATGGAAATTGAAGACAAATTTGATCAGAAAGAGCCATTAATACCCAAACAAACTACATCTCAGCTTCTCAGATTGAAGGATGTGGTTTCTCATCAAAACCATACGCTCGCTCTTCAGTTAAAGCCCAAGGTGGTGGTGCTGAGGGTGTCCATGCATTGTAATGGCTGTGCCAGAAAGGTTGAGAAGCACATCTCCAAGATGGAAGGCGTGGATTCATATGAGGTAGATTTGGAAAGGAAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTTCTGCAATGCGTTTCTAAAGTGAAAAGTGCAGAGATTTGGGAGCCACAAGACTGA

Protein sequence

MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKSAEIWEPQD

Homology

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BLAST of Tan0020855 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.9e-16
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0


Query: 68  KVVVLRVSMHCN--GCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKV 127
           +VVVLRVS+HC+  GC  KV+KH+SKM+GV S+ +D   K V VTGD+ P EVL C+SKV
Sbjct: 168 QVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLGCLSKV 227

Query: 128 KSAEIWEP 134
           K+A+ W P
Sbjct: 228 KNAQFWTP 235

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BLAST of Tan0020855 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.9e-16
Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 68  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKS 127
           +VVVLRVS+HC GCA KV+KH+SK++GV SY +D   K V VTGDV P  VL  +SKVK+
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 128 AEIW 132
           A+ W
Sbjct: 310 AQFW 313

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BLAST of Tan0020855 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.6e-15
Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 68  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKS 127
           +VVVL+VS+HC GC  KV KH+++M+GV S+ +D   K V VTGD+ P E+L  +SKVK+
Sbjct: 181 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKN 240

Query: 128 AEIW 132
           A+ W
Sbjct: 241 AQFW 244

[Close]

BLAST of Tan0020855 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 4.6e-09
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 68  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKV-K 127
           + VVLRV+M C GC   V++ + KMEGV+S++VD++ + V V G+V P  VLQ V+K  K
Sbjct: 3   QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGK 62

Query: 128 SAEIWEPQ 135
               WE +
Sbjct: 63  KTAFWEAE 70

[Close]

BLAST of Tan0020855 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.8e-09
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 0


Query: 56  HQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFP 115
           H N  L + L   +V L V M C GC +KV + ISK++GVD+ E+D++R+ V VTG V  
Sbjct: 6   HGNSRLPIAL--SIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDR 65

Query: 116 FEVLQCVSKV-KSAEIW 132
            EVL+ V +  ++AE W
Sbjct: 66  EEVLKMVKRTGRTAEYW 80

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BLAST of Tan0020855 vs. NCBI nr
Match: XP_031736582.1 (uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetical protein Csa_019330 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 3.0e-42
Identity = 97/143 (67.83%), Postives = 116/143 (81.12%), Query Frame = 0


Query: 1   MGKRV-GIGKVLECFLNTR-ASSSC--LCMEIED--KFDQKEPLIPKQTTS---QLLRLK 60
           MGK V  IGKV  CF+NT  +S+SC    +EIED   FDQK+PL+PKQTTS    LL  K
Sbjct: 1   MGKLVMSIGKVFSCFINTTDSSTSCNLYRLEIEDSNNFDQKQPLMPKQTTSTTHDLLGFK 60

Query: 61  DVVSHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTG 120
           DV++HQN TL LQ  PKVVV+RVSMHCNGCAR+VEKHISK++GV+S++VD+ER+ VVVTG
Sbjct: 61  DVITHQNETLPLQFNPKVVVVRVSMHCNGCARRVEKHISKIQGVESWKVDMERETVVVTG 120

Query: 121 DVFPFEVLQCVSKVKSAEIWEPQ 135
           DVFPFEV+QC+SKVKS EI EPQ
Sbjct: 121 DVFPFEVMQCISKVKSVEILEPQ 143

[Close]

BLAST of Tan0020855 vs. NCBI nr
Match: XP_022946348.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 175.6 bits (444), Expect = 2.8e-40
Identity = 90/135 (66.67%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 1   MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHT 60
           MGK VGIGKV  CF+N+ ASSS  C +IE  F+ K+PL+P Q  S LLRL DV+SH N  
Sbjct: 1   MGKAVGIGKVFSCFMNSGASSS--CFQIEATFEPKQPLMPNQPNSHLLRLNDVISHTNQ- 60

Query: 61  LALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQ 120
              Q  PKVV LRVSMHCNGCAR+VEK+I K+EGVDSY+VD ERK VVVTGDV  FEV+Q
Sbjct: 61  ---QANPKVVELRVSMHCNGCARRVEKNIGKIEGVDSYKVDFERKTVVVTGDVSSFEVIQ 120

Query: 121 CVSKVKSAEIWEPQD 136
           CVSKV+S EI EPQ+
Sbjct: 121 CVSKVRSVEILEPQE 129

[Close]

BLAST of Tan0020855 vs. NCBI nr
Match: KAG7030420.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 175.6 bits (444), Expect = 2.8e-40
Identity = 90/135 (66.67%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 1   MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHT 60
           MGK VGIGKV  CF+N+ ASSS  C +IE  F+ K+PL+P Q  S LLRL DV+SH N  
Sbjct: 1   MGKAVGIGKVFSCFMNSGASSS--CFQIEATFEPKQPLMPNQPNSHLLRLNDVISHTNQ- 60

Query: 61  LALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQ 120
              Q  PKVV LRVSMHCNGCAR+VEK+I K+EGVDSY+VD ERK VVVTGDV  FEV+Q
Sbjct: 61  ---QTNPKVVELRVSMHCNGCARRVEKNIGKIEGVDSYKVDFERKTVVVTGDVSSFEVIQ 120

Query: 121 CVSKVKSAEIWEPQD 136
           CVSKV+S EI EPQ+
Sbjct: 121 CVSKVRSVEILEPQE 129

[Close]

BLAST of Tan0020855 vs. NCBI nr
Match: XP_022999545.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 173.3 bits (438), Expect = 1.4e-39
Identity = 89/135 (65.93%), Postives = 103/135 (76.30%), Query Frame = 0


Query: 1   MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHT 60
           MGK VGIGKV  CF+N+RASSS  C EIE  F+ K+PL+P Q  S LLR  DV+SH N  
Sbjct: 1   MGKAVGIGKVFSCFMNSRASSS--CFEIEGTFEPKQPLMPNQPNSHLLRFNDVISHTNQ- 60

Query: 61  LALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQ 120
              Q  PKVV LRVSMHCNGCAR+VEK+I K+EGVDS++VD ERK VVVTGDV  FEV+Q
Sbjct: 61  ---QTNPKVVELRVSMHCNGCARRVEKNIGKIEGVDSFKVDFERKTVVVTGDVSSFEVIQ 120

Query: 121 CVSKVKSAEIWEPQD 136
           CVSKV+S EI E Q+
Sbjct: 121 CVSKVRSVEILEHQE 129

[Close]

BLAST of Tan0020855 vs. NCBI nr
Match: XP_008458177.1 (PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 copper-binding family protein [Cucumis melo var. makuwa])

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-38
Identity = 94/146 (64.38%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 1   MGKRV-GIGKVLECFLNTRASSSCLC----MEIED--KFDQKEPLIPKQTTS---QLLRL 60
           MGK V  IGKV  CF+NT  SSS  C     EIED   FDQK+PL+ KQTTS    LL  
Sbjct: 1   MGKLVLSIGKVFSCFINTTDSSSTSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGF 60

Query: 61  KDVVSHQNHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVV 120
           KDV++HQN TL  LQ  PKVV++RVSMHCNGCAR+VEK ISK++GV+S++VD+ER+ VVV
Sbjct: 61  KDVITHQNKTLRPLQFNPKVVMVRVSMHCNGCARRVEKLISKIQGVESWKVDMERERVVV 120

Query: 121 TGDVFPFEVLQCVSKVKSAEIWEPQD 136
           TGDVFPFEV++C+SKVKS EI E QD
Sbjct: 121 TGDVFPFEVMECISKVKSVEILESQD 146

[Close]

BLAST of Tan0020855 vs. ExPASy TrEMBL
Match: A0A6J1G3J1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450448 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.4e-40
Identity = 90/135 (66.67%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 1   MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHT 60
           MGK VGIGKV  CF+N+ ASSS  C +IE  F+ K+PL+P Q  S LLRL DV+SH N  
Sbjct: 1   MGKAVGIGKVFSCFMNSGASSS--CFQIEATFEPKQPLMPNQPNSHLLRLNDVISHTNQ- 60

Query: 61  LALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQ 120
              Q  PKVV LRVSMHCNGCAR+VEK+I K+EGVDSY+VD ERK VVVTGDV  FEV+Q
Sbjct: 61  ---QANPKVVELRVSMHCNGCARRVEKNIGKIEGVDSYKVDFERKTVVVTGDVSSFEVIQ 120

Query: 121 CVSKVKSAEIWEPQD 136
           CVSKV+S EI EPQ+
Sbjct: 121 CVSKVRSVEILEPQE 129

[Close]

BLAST of Tan0020855 vs. ExPASy TrEMBL
Match: A0A6J1KFP0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493873 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 6.8e-40
Identity = 89/135 (65.93%), Postives = 103/135 (76.30%), Query Frame = 0


Query: 1   MGKRVGIGKVLECFLNTRASSSCLCMEIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQNHT 60
           MGK VGIGKV  CF+N+RASSS  C EIE  F+ K+PL+P Q  S LLR  DV+SH N  
Sbjct: 1   MGKAVGIGKVFSCFMNSRASSS--CFEIEGTFEPKQPLMPNQPNSHLLRFNDVISHTNQ- 60

Query: 61  LALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQ 120
              Q  PKVV LRVSMHCNGCAR+VEK+I K+EGVDS++VD ERK VVVTGDV  FEV+Q
Sbjct: 61  ---QTNPKVVELRVSMHCNGCARRVEKNIGKIEGVDSFKVDFERKTVVVTGDVSSFEVIQ 120

Query: 121 CVSKVKSAEIWEPQD 136
           CVSKV+S EI E Q+
Sbjct: 121 CVSKVRSVEILEHQE 129

[Close]

BLAST of Tan0020855 vs. ExPASy TrEMBL
Match: A0A5A7V1Y2 (Copper-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001300 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.7e-39
Identity = 94/146 (64.38%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 1   MGKRV-GIGKVLECFLNTRASSSCLC----MEIED--KFDQKEPLIPKQTTS---QLLRL 60
           MGK V  IGKV  CF+NT  SSS  C     EIED   FDQK+PL+ KQTTS    LL  
Sbjct: 1   MGKLVLSIGKVFSCFINTTDSSSTSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGF 60

Query: 61  KDVVSHQNHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVV 120
           KDV++HQN TL  LQ  PKVV++RVSMHCNGCAR+VEK ISK++GV+S++VD+ER+ VVV
Sbjct: 61  KDVITHQNKTLRPLQFNPKVVMVRVSMHCNGCARRVEKLISKIQGVESWKVDMERERVVV 120

Query: 121 TGDVFPFEVLQCVSKVKSAEIWEPQD 136
           TGDVFPFEV++C+SKVKS EI E QD
Sbjct: 121 TGDVFPFEVMECISKVKSVEILESQD 146

[Close]

BLAST of Tan0020855 vs. ExPASy TrEMBL
Match: A0A1S3C8H9 (uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.7e-39
Identity = 94/146 (64.38%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 1   MGKRV-GIGKVLECFLNTRASSSCLC----MEIED--KFDQKEPLIPKQTTS---QLLRL 60
           MGK V  IGKV  CF+NT  SSS  C     EIED   FDQK+PL+ KQTTS    LL  
Sbjct: 1   MGKLVLSIGKVFSCFINTTDSSSTSCCLYRFEIEDSNNFDQKQPLMAKQTTSTTHDLLGF 60

Query: 61  KDVVSHQNHTL-ALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVV 120
           KDV++HQN TL  LQ  PKVV++RVSMHCNGCAR+VEK ISK++GV+S++VD+ER+ VVV
Sbjct: 61  KDVITHQNKTLRPLQFNPKVVMVRVSMHCNGCARRVEKLISKIQGVESWKVDMERERVVV 120

Query: 121 TGDVFPFEVLQCVSKVKSAEIWEPQD 136
           TGDVFPFEV++C+SKVKS EI E QD
Sbjct: 121 TGDVFPFEVMECISKVKSVEILESQD 146

[Close]

BLAST of Tan0020855 vs. ExPASy TrEMBL
Match: A0A7N2L0N3 (HMA domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.3e-38
Identity = 94/134 (70.15%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 1   MGKRVGIGKVLECFLNTRASSSCLCM---EIEDKFDQKEPLIPKQTTSQLLRLKDVVSHQ 60
           MGK +  GKVL+CF  T  SSSC CM   E +D+F+ K PLI     SQLLRLKDVVS  
Sbjct: 1   MGK-LSFGKVLDCFCLTSCSSSCFCMNSAETQDEFESK-PLIASD-KSQLLRLKDVVS-G 60

Query: 61  NHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFE 120
           N TLA QLKPK+V+LRVSMHCNGCARKVEKHISKMEGV SY+VDLE KMVVV GD+ PFE
Sbjct: 61  NQTLAFQLKPKMVMLRVSMHCNGCARKVEKHISKMEGVTSYKVDLETKMVVVIGDILPFE 120

Query: 121 VLQCVSKVKSAEIW 132
           VL+ VSKVK+AE+W
Sbjct: 121 VLESVSKVKNAELW 130

[Close]

BLAST of Tan0020855 vs. TAIR 10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 6.3e-30
Identity = 67/137 (48.91%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 1   MGKRVGIGKVLECFLNTRASSSCLCMEI---EDKFDQKEPLIPKQT--TSQLLRLKDVV- 60
           MGK   IG+V +C        SC C+     E++  +KEPLI   T  + +++RLKDVV 
Sbjct: 1   MGKLQKIGRVWDCLFLPTNQCSCFCLNTLGDEEEEFEKEPLIDSSTEKSGKVMRLKDVVA 60

Query: 61  SHQNHTLALQLKPKVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVF 120
           +    TLA  LKPK+V L+VSMHC GCA+KVEKHISK++GV  Y+V+LE K VVV G++ 
Sbjct: 61  ADHRQTLAFHLKPKIVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNIL 120

Query: 121 PFEVLQCVSKVKSAEIW 132
           P +VL+ + KVK+A++W
Sbjct: 121 PVDVLESICKVKNAQLW 137

[Close]

BLAST of Tan0020855 vs. TAIR 10
Match: AT3G53530.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.1e-17
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0


Query: 68  KVVVLRVSMHCN--GCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKV 127
           +VVVLRVS+HC+  GC  KV+KH+SKM+GV S+ +D   K V VTGD+ P EVL C+SKV
Sbjct: 168 QVVVLRVSLHCHCRGCQGKVKKHLSKMQGVTSFNIDFASKKVTVTGDITPLEVLGCLSKV 227

Query: 128 KSAEIWEP 134
           K+A+ W P
Sbjct: 228 KNAQFWTP 235

[Close]

BLAST of Tan0020855 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 2.7e-17
Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 68  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKS 127
           +VVVLRVS+HC GCA KV+KH+SK++GV SY +D   K V VTGDV P  VL  +SKVK+
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 128 AEIW 132
           A+ W
Sbjct: 310 AQFW 313

[Close]

BLAST of Tan0020855 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 2.7e-17
Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 68  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKS 127
           +VVVLRVS+HC GCA KV+KH+SK++GV SY +D   K V VTGDV P  VL  +SKVK+
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKN 309

Query: 128 AEIW 132
           A+ W
Sbjct: 310 AQFW 313

[Close]

BLAST of Tan0020855 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 82.0 bits (201), Expect = 4.0e-16
Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 68  KVVVLRVSMHCNGCARKVEKHISKMEGVDSYEVDLERKMVVVTGDVFPFEVLQCVSKVKS 127
           +VVVL+VS+HC GC  KV KH+++M+GV S+ +D   K V VTGD+ P E+L  +SKVK+
Sbjct: 181 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSFNIDFAAKKVTVTGDITPLEILDSISKVKN 240

Query: 128 AEIW 132
           A+ W
Sbjct: 241 AQFW 244

The following BLAST results are available for this feature:

BLAST of Tan0020855 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXH8	2.9e-16	58.82	Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q8LDS4	3.9e-16	60.94	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q58FZ0	5.6e-15	53.13	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q94BT9	4.6e-09	45.59	Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2	[more]
B3H6D0	7.8e-09	44.16	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]

BLAST of Tan0020855 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736582.1	3.0e-42	67.83	uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetica...	[more]
XP_022946348.1	2.8e-40	66.67	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata]	[more]
KAG7030420.1	2.8e-40	66.67	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_022999545.1	1.4e-39	65.93	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima]	[more]
XP_008458177.1	1.2e-38	64.38	PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 cop...	[more]

BLAST of Tan0020855 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3J1	1.4e-40	66.67	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita moschata ...	[more]
A0A6J1KFP0	6.8e-40	65.93	protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita maxima OX...	[more]
A0A5A7V1Y2	5.7e-39	64.38	Copper-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3C8H9	5.7e-39	64.38	uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=...	[more]
A0A7N2L0N3	1.3e-38	70.15	HMA domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Tan0020855 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24450.1	6.3e-30	48.91	Heavy metal transport/detoxification superfamily protein	[more]
AT3G53530.1	2.1e-17	58.82	Chloroplast-targeted copper chaperone protein	[more]
AT5G02600.2	2.7e-17	60.94	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.1	2.7e-17	60.94	Heavy metal transport/detoxification superfamily protein	[more]
AT2G37390.1	4.0e-16	53.13	Chloroplast-targeted copper chaperone protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 66..129 e-value: 5.6E-18 score: 66.9
None	No IPR available	PANTHER	PTHR46119:SF11	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 5..132
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 71..118 e-value: 6.1E-14 score: 52.2
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 68..125 score: 11.833786
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 71..113 e-value: 3.22371E-12 score: 55.6897
IPR044526	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3	PANTHER	PTHR46119	OS08G0405700 PROTEIN	coord: 5..132
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 67..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020855.1	Tan0020855.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding