
Tan0020792 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAATAAAAGAGAGAGAGAAAGAGAGATGGATGAATATGAAGAAAACCCATCATTCTTGGAAGGTATAGGAAACCCATCCACCATGGGAAAAAGTGATGCATGGGAATAAGTGATACCTATGCCCATGCTTACAAACCTTGTTCCAAACAAGGAGATTTAAAACCCTTACCCATTCCCATCCACAAAACCTTGCACCAAACGGCCCCATCTCTTCTCCATTCCAATGCTCCAAGTCTCCAACTCCATTCTCAATTCTGTCATTCACCCTTTCGATTCCCAGTCTCATCTACATTCATTCACCCGTAGCATCTTCTTGCGAGAAGGAGAGGAGAGACCAGAAGTTCAGCGCCGACTCCGGCTCTGGCGTCGATCGTGCGAGGTGCGGCAACCGTGCTTTCATTCACCCTTTCAGTTTCTACAGCACTGCCTCCGGCTCCGGCGAAACAATCGACGTCTTCTTCAGCAGTCAGCGACCTCCAGTCCCTCGACCTCCGACTCCGACTTCTCCAGCCTCAGATCTGACGTCTCCAGCCCCAGATCCGGATCCGACATCTCTTGATTTGTTCCTCTGCTTTGGATTCCTCTGCCTCCTTTAGTTTCTGCTTGGTAATTTTTCTCTATTTTCTTCTGCTTCCCTTTAGTTACATGAATCAAATGACAAATGAGGGGAGTTAAACATGAAAACAAATTCTCAGATCAAACATAGCATGACTAACTTTGATTTAGGCTAAACAACAAATTCTGTAATAGAAATCAACTATTTAGAATGTAGTAATAATATATTAATTTTTTTTTTAAAAATATATCATTTAAAAATTAAACAAATGGTGAAAATTCTCCGGGGAATCCCTGCCCCGTCCCCGCGAAAATAAATGGTGAATTTTGCGGGGACGGGGATTGGTATGGGTGACGGGGACGGGGAAGGCTTCCACGTCCCCGCCCCGCCCCGTGGACACCTCTACATGCAGTCTTATGGGTTGCAACATGTAATTAGGAAATTCAATTTATTCTCATTTTATGTGAACTTTAATCTCAGAAATTCTTGTTTACAGTGTCAGGTTATCATCCACCCTCGTAGACGGAGATGCTTACTACCAATTCTGGTGCCATGCTACCTCTACTACCCCCAGGTACGAGCAACTAATCTCCAAATTGTTTTACTGATTTGATGTAAGAGGAAGTGAATGGATTTAATTATAATAAAAAAGGATGAGTACAAGAGAAGGAAAGCAGGATAAGGCATTTTCCCTGCCTCAGAAAGGAACTTGTAAAAAGCCAATATCTAATTTGATTCGAGAAGTAAGGCAATGCCAGACTTCCTACTAGTCACTCCAGCATGAGGTGCTGTATTGTATACAGTTCAAGAAATTGTCAAAAGTTTTAAAGATACCTTGAAGGATTCTATTGTTCTTTTCAATCTAAAATGAACCATATAATAGCTTTTGAAGGTTTTCCTAGTAGAACTCTACCTTTTTCAGCCACCAGCCCACAAAAACTTCTGAAATCAGGAGCTCACATCCTCCAAGAAGTTCCAAGAATCCTAAATTTGACATGGTGAAAATTTCGGCTTTTAGTTGCACAAAAGATATATCATATATGAGCTATTTCTCTCATTGCCAATTGATTTTGAAATGGAACCCCATCTAATTTAATATGTTATTAGGGCCCATATAACCCAAACGGGTATTCGGTCCAAAAATTGAAATTGGGATCCGATCTAAGAATGGTAAACCCAAAGGGGCACCATCTTGAGGGGGCATGTTGAGGATCTCACATTGAAAAAGTGGAGAGAAACCTCACAACTAAGATATATGAGTTACTCCTCCCATTATATATTTGTTTTAAAATGGAACCCATATAATCTAATAGGTAGAGAAAGAGATGGTTTATATTGGGAAAAGTTGTCTTTTTGTGGTTCCCTTCCTTCCTAATCAGTTGGTAACAGAGGCTGGGGTTTTTGTTGGTTAGGTAGACCAGGGAAGAGTTGCAAGAATATGCCCCGAAATTATCAAATTCCAAATGCAAAGACATGTTATATATGCTTCATACTAATAAGTAATAACTATCATTTGTTATTGGGAACAAATAATTTAGCTGGTATATATCTACTCAAGCAATCTGATTCTTGAGATAACATTTCTGTGCTCAGTGTGTTTATATGAAAGATTTTTTTTCCTTGTAAGTAATAGATAACTATTGTAGAAATAATTGCATCTGGTGCTTGAAGCTAGCTCTTGTCTCACATGGAAACATGTATGTGGTACAACCAAGTGACAGCTTTTCATGGTTTTGAGTTCTCAATATTTGGTCAACTGATGCGAGGTAGAAATTTTATTGATGGGCCATAACATCTTGATAATTTTTTGAAATGTATATTTATTTACACTCGGTTGATTGGAGCAGTCAAATTTTCACTAATGGCTGCTAATTTTGATAATTAAGATTTGTCAAATGCCTCTATCTTTGTAATAATATAATATATGTACTTGTCTTGTGGCCTTATGTTATCCCTAAATACTTCATGAGTTTCAATATATTGCTTCTCAGGCTGAAAAATGTAACTAATTAGCTTACGTTTTAAATTTGAAGACCACTATATTTACATTGGTTTCTTGTTCAGTTAAAAAGTGGCTTCTTGTTTAAATTATTATTCTATTACCATCAATTTGAGATCTTTTTTATTATTTAATTGTAATATTGTCTTTGTAAAATAGTGGGACAGCATTGGGGAAGAATGAAGGTCCTAGACTTCCATCTTAGAAGGGATAGTTTCCGAGTTCAAATTCCTAATGAGAGGAGACGACCAGTGACTGGTAATGCAGGACCACCTTTTCTCAAACCAATTCCAGCTACTGGGACGAGGGGAGGTGTTCTACGTTCTAGTAGAAAGAACAACGCTTTCATATGTTTTGCTGCTTTGGTAAGTTGGTTCCTATTCTATTTGTTTATTTCTTTTAATGCTTGCTTGTTTTCTTTTGTTATTTAGTTGGTAATAACTTTTTCGATTAGAAACATTATCTTAGGATCATGAAATGTACAAAAACCTTAAGCGAAGATGCCAAGGGAGATTATCAAAAGGCTTCCCCATTTGTTGAAATGAGTTGGGGGATTTGGCTGGAAAGGAATCATGGAATTTTTAGAGGGTGGGAGATATGTGGAGGAGTTGTGATAGGTTATTAGGTTTAATGCCTTAGTTTGGGCGTCGATGCTAAGGTCTTTTGTAATTATAAAATAGGCTTTATTCTTGTGGATTAGTGCTCCATGTACTTCCTTGTGCTCTATTTTCTTTGTGGCCCTCGTATATTCTTTCATATTTCTTGATTAATACTTGGTTTCTTGTAAAAAAGAAACAAAAATGTTGAAATTAGAAATAGTTGAAGCTACATTTTTCATTCTCAAATACCTAATCAATTAGTATTTGTTGGACAAGCGTTTGAAGTCATGTATAATAGACTCGATGGTGGATGAGTTTTTGTTAAATAATCAATAGTAAAGAATAAAATAGGTTTCTAGGCATCGTTAGAGACTCAAAACAGAATATTTGAAAGAGGGATGAAGTGAAAACATTATCAAATGGTGCTGTTTCTCTGCAGAATGCTAGATGTGCCGCGGAGCAGACCCAGACCGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCTGGTAACAAGCACTTGCAGATTTTATGAGTAATAGTAACTTCTATCATCAATCTTCCCAGCAGTAAGTCAAGTTGCATGTGCATATATTAGTCCACGCAACCAGAACGCCAGTCTGTTACTCCTTGAAAATAACTCGCATCACTACATTCTTACCGATTTATCTCTCCCTCACATGCACGCACACATGGCATTGTCGTAGGCTATCATAATTTCAGCTTTTGCTAAGCCATATTTTAAAACCTTACATTGTATTACCTAATACTAAAATTGCAGGCAAGGAGAAGTCACCGCAACTGGATGATGGTGATTCTGGATTCCCACCTCGTGATGATGGTGATGGCGGCGGTGGAGGTGGCGGCGGCGGAGGCAACTGGTCTGGTGGTTTCTTTTTCTTTGGCTTCCTTGCTTTCCTAGGCTTCTTAAAAGATAAAGAAAGCGAAGGGCCTTATCAGAATGATCGGAGAAGATAAACATACTGTGATCAAATATATAATGTAGATTCTATAGATACAATCTCAAAATTAACTTTTGTTTTTAGTCATGTTAATCTCCATTAAATTCATTTCACCCAGTAGTTTGCTTTTAATTCAGTAATCCCTATGGACTGGAGTAAGAGCATAAAGTTTTCTGAGATCTTATTTGAAATTTCAGTAGTCAAAGATATAAATGGTGGAGATGAAAGCTAATGAGTTCCTTGTTGATAGAAACAATGGTTGCTGATTTTAGGGTATTTGTAGTCCTTGACCTTTAAGCCAGAGGCTGAGGGGTTCTGTTCAAATGTTAGTTCTGAGGGACTCCTAGCTGTGAAGCCTATCCCATTTCCTTAGTTGTGCTAAATGGAAATCTGGTATAATTTAATAAAATATTTCAAGTTTATTAACTAATAAACTATTTTAATATAATATATTAGGAGTTGTTTGGGCTGAGTAGATTATAATAATATGAGTTCTAATAATTTGTGGGTTATTATAATCTGTGGAATCAAGTAATATTATTTAAAATACATAGTAGTATAGTCTGAGATTATAATAGCCTGTGTGTGATGTAGAGTATTCCAAGTTTGTAATAGATCCTTATTGATTGTACTAAAATAATTTGTAAATTTTCTTTGATCATGCCAGAAATAGAAAAGGCCATCTTTTATTGTTTTTTTTTTTAGGTGTAACAACACTTATTCAATAATTTTGTATTAGTCAACCTTGTATTTTTGTTGCTAAATAATTGTTGTATAAAGTATAATGTATTAAGGCGTC ATTAATAAAAGAGAGAGAGAAAGAGAGATGGATGAATATGAAGAAAACCCATCATTCTTGGAAGGTATAGGAAACCCATCCACCATGGGAAAAAGTGATGCATGGGAATAAGTGATACCTATGCCCATGCTTACAAACCTTGTTCCAAACAAGGAGATTTAAAACCCTTACCCATTCCCATCCACAAAACCTTGCACCAAACGGCCCCATCTCTTCTCCATTCCAATGCTCCAAGTCTCCAACTCCATTCTCAATTCTGTCATTCACCCTTTCGATTCCCAGTCTCATCTACATTCATTCACCCGTAGCATCTTCTTGCGAGAAGGAGAGGAGAGACCAGAAGTTCAGCGCCGACTCCGGCTCTGGCGTCGATCGTGCGAGGTGCGGCAACCGTGCTTTCATTCACCCTTTCAGTTTCTACAGCACTGCCTCCGGCTCCGGCGAAACAATCGACGTCTTCTTCAGCAGTCAGCGACCTCCAGTCCCTCGACCTCCGACTCCGACTTCTCCAGCCTCAGATCTGACGTCTCCAGCCCCAGATCCGGATCCGACATCTCTTGATTTGTTCCTCTGCTTTGGATTCCTCTGCCTCCTTTAGTTTCTGCTTGTGTCAGGTTATCATCCACCCTCGTAGACGGAGATGCTTACTACCAATTCTGGTGCCATGCTACCTCTACTACCCCCAGTGGGACAGCATTGGGGAAGAATGAAGGTCCTAGACTTCCATCTTAGAAGGGATAGTTTCCGAGTTCAAATTCCTAATGAGAGGAGACGACCAGTGACTGGTAATGCAGGACCACCTTTTCTCAAACCAATTCCAGCTACTGGGACGAGGGGAGGTGTTCTACGTTCTAGTAGAAAGAACAACGCTTTCATATGTTTTGCTGCTTTGAATGCTAGATGTGCCGCGGAGCAGACCCAGACCGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCTGGCAAGGAGAAGTCACCGCAACTGGATGATGGTGATTCTGGATTCCCACCTCGTGATGATGGTGATGGCGGCGGTGGAGGTGGCGGCGGCGGAGGCAACTGGTCTGGTGGTTTCTTTTTCTTTGGCTTCCTTGCTTTCCTAGGCTTCTTAAAAGATAAAGAAAGCGAAGGGCCTTATCAGAATGATCGGAGAAGATAAACATACTGTGATCAAATATATAATGTAGATTCTATAGATACAATCTCAAAATTAACTTTTGTTTTTAGTCATGTTAATCTCCATTAAATTCATTTCACCCAGTAGTTTGCTTTTAATTCAGTAATCCCTATGGACTGGAGTAAGAGCATAAAGTTTTCTGAGATCTTATTTGAAATTTCAGTAGTCAAAGATATAAATGGTGGAGATGAAAGCTAATGAGTTCCTTGTTGATAGAAACAATGGTTGCTGATTTTAGGGTATTTGTAGTCCTTGACCTTTAAGCCAGAGGCTGAGGGGTTCTGTTCAAATGTTAGTTCTGAGGGACTCCTAGCTGTGAAGCCTATCCCATTTCCTTAGTTGTGCTAAATGGAAATCTGGTATAATTTAATAAAATATTTCAAGTTTATTAACTAATAAACTATTTTAATATAATATATTAGGAGTTGTTTGGGCTGAGTAGATTATAATAATATGAGTTCTAATAATTTGTGGGTTATTATAATCTGTGGAATCAAGTAATATTATTTAAAATACATAGTAGTATAGTCTGAGATTATAATAGCCTGTGTGTGATGTAGAGTATTCCAAGTTTGTAATAGATCCTTATTGATTGTACTAAAATAATTTGTAAATTTTCTTTGATCATGCCAGAAATAGAAAAGGCCATCTTTTATTGTTTTTTTTTTTAGGTGTAACAACACTTATTCAATAATTTTGTATTAGTCAACCTTGTATTTTTGTTGCTAAATAATTGTTGTATAAAGTATAATGTATTAAGGCGTC ATGCTTACTACCAATTCTGGTGCCATGCTACCTCTACTACCCCCAGTGGGACAGCATTGGGGAAGAATGAAGGTCCTAGACTTCCATCTTAGAAGGGATAGTTTCCGAGTTCAAATTCCTAATGAGAGGAGACGACCAGTGACTGGTAATGCAGGACCACCTTTTCTCAAACCAATTCCAGCTACTGGGACGAGGGGAGGTGTTCTACGTTCTAGTAGAAAGAACAACGCTTTCATATGTTTTGCTGCTTTGAATGCTAGATGTGCCGCGGAGCAGACCCAGACCGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCTGGCAAGGAGAAGTCACCGCAACTGGATGATGGTGATTCTGGATTCCCACCTCGTGATGATGGTGATGGCGGCGGTGGAGGTGGCGGCGGCGGAGGCAACTGGTCTGGTGGTTTCTTTTTCTTTGGCTTCCTTGCTTTCCTAGGCTTCTTAAAAGATAAAGAAAGCGAAGGGCCTTATCAGAATGATCGGAGAAGATAA MLTTNSGAMLPLLPPVGQHWGRMKVLDFHLRRDSFRVQIPNERRRPVTGNAGPPFLKPIPATGTRGGVLRSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR Homology
BLAST of Tan0020792 vs. ExPASy Swiss-Prot
Match: Q0E3V2 (Protein YELLOW LEAF 1, choloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=YL1 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.7e-08 Identity = 44/99 (44.44%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of Tan0020792 vs. ExPASy Swiss-Prot
Match: F1SZ44 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RF2 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.9e-08 Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of Tan0020792 vs. ExPASy Swiss-Prot
Match: F1SZ42 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RF2 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 8.4e-08 Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of Tan0020792 vs. ExPASy Swiss-Prot
Match: F1SZ41 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=RF2 PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 8.4e-08 Identity = 41/83 (49.40%), Postives = 51/83 (61.45%), Query Frame = 0
BLAST of Tan0020792 vs. NCBI nr
Match: XP_023540533.1 (uncharacterized protein LOC111800870 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 304.7 bits (779), Expect = 5.1e-79 Identity = 151/172 (87.79%), Postives = 160/172 (93.02%), Query Frame = 0
BLAST of Tan0020792 vs. NCBI nr
Match: XP_023005574.1 (uncharacterized protein LOC111498519 isoform X1 [Cucurbita maxima] >XP_023005575.1 uncharacterized protein LOC111498519 isoform X1 [Cucurbita maxima] >XP_023005577.1 uncharacterized protein LOC111498519 isoform X2 [Cucurbita maxima]) HSP 1 Score: 302.4 bits (773), Expect = 2.5e-78 Identity = 151/172 (87.79%), Postives = 159/172 (92.44%), Query Frame = 0
BLAST of Tan0020792 vs. NCBI nr
Match: KAG6596785.1 (Protein YELLOW LEAF 1, choloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 297.4 bits (760), Expect = 8.2e-77 Identity = 149/172 (86.63%), Postives = 157/172 (91.28%), Query Frame = 0
BLAST of Tan0020792 vs. NCBI nr
Match: XP_022949842.1 (uncharacterized protein LOC111453117 [Cucurbita moschata] >XP_022949851.1 uncharacterized protein LOC111453117 [Cucurbita moschata]) HSP 1 Score: 294.7 bits (753), Expect = 5.3e-76 Identity = 148/172 (86.05%), Postives = 156/172 (90.70%), Query Frame = 0
BLAST of Tan0020792 vs. NCBI nr
Match: XP_022965198.1 (uncharacterized protein LOC111465127 [Cucurbita maxima] >XP_022965199.1 uncharacterized protein LOC111465127 [Cucurbita maxima]) HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75 Identity = 149/173 (86.13%), Postives = 158/173 (91.33%), Query Frame = 0
BLAST of Tan0020792 vs. ExPASy TrEMBL
Match: A0A6J1KZM4 (uncharacterized protein LOC111498519 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498519 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78 Identity = 151/172 (87.79%), Postives = 159/172 (92.44%), Query Frame = 0
BLAST of Tan0020792 vs. ExPASy TrEMBL
Match: A0A6J1GD79 (uncharacterized protein LOC111453117 OS=Cucurbita moschata OX=3662 GN=LOC111453117 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.6e-76 Identity = 148/172 (86.05%), Postives = 156/172 (90.70%), Query Frame = 0
BLAST of Tan0020792 vs. ExPASy TrEMBL
Match: A0A6J1HQC3 (uncharacterized protein LOC111465127 OS=Cucurbita maxima OX=3661 GN=LOC111465127 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 7.5e-76 Identity = 149/173 (86.13%), Postives = 158/173 (91.33%), Query Frame = 0
BLAST of Tan0020792 vs. ExPASy TrEMBL
Match: A0A6J1F258 (uncharacterized protein LOC111438781 OS=Cucurbita moschata OX=3662 GN=LOC111438781 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 4.8e-75 Identity = 148/173 (85.55%), Postives = 158/173 (91.33%), Query Frame = 0
BLAST of Tan0020792 vs. ExPASy TrEMBL
Match: A0A1S4DXD8 (uncharacterized protein LOC103490999 OS=Cucumis melo OX=3656 GN=LOC103490999 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.8e-74 Identity = 145/172 (84.30%), Postives = 153/172 (88.95%), Query Frame = 0
BLAST of Tan0020792 vs. TAIR 10
Match: AT1G56200.1 (embryo defective 1303 ) HSP 1 Score: 141.4 bits (355), Expect = 7.0e-34 Identity = 78/119 (65.55%), Postives = 89/119 (74.79%), Query Frame = 0
BLAST of Tan0020792 vs. TAIR 10
Match: AT1G56200.2 (embryo defective 1303 ) HSP 1 Score: 141.4 bits (355), Expect = 7.0e-34 Identity = 78/119 (65.55%), Postives = 89/119 (74.79%), Query Frame = 0
BLAST of Tan0020792 vs. TAIR 10
Match: AT1G30475.1 (BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 148 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 14; Metazoa - 63; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25 Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of Tan0020792 vs. TAIR 10
Match: AT1G30475.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 142 Blast hits to 142 proteins in 33 species: Archae - 0; Bacteria - 14; Metazoa - 57; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25 Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of Tan0020792 vs. TAIR 10
Match: AT1G30475.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 142 Blast hits to 142 proteins in 33 species: Archae - 0; Bacteria - 14; Metazoa - 57; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25 Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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