Tan0020629 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCAGCAACCTCCTTCTCCATAGCGTCGCTCCGAGTCCATTCACTGAACTCAATCCAACTTTCAAATGGCAAAATTCCTCTCCGCTCTTATTCATCTCGAGAAGGCACGAACGACTTCGTTGCTTCGCCAAGAAGAAAATCGGCTTCATGGATCAAATTCGTGACTACATTGAAGGTGCGCTTCAAATTCAGCACAAACAAATTCGAGAGTGGAAAATCTTATTTTCAATGATTTTGTTAATTTTGTGATATTGTTTTGAGTTACTCTGACTGTTATCTTAATTTGTTTTCGCTTTCTTGTTTGATTTTAGGCGGTCCGAAGTTAAGGAAATGGTATGGGGCGCCTGACCTTGTTTCTAGAGATGATTCTGTCCTTAAAGACGAGGATGAATATGCTGGTAATGTACAGGAGCAAATTGTTTTGTACGTCTTCTGATTTTCTGTCTTCTTAGATTGAGTGTGTTTCATTAGTACAGAGGAAGATACAATCAGGGATGCGGTTTTAGTGACTGATGGGGATACTGAAATGGGTCAGGTGTGTTTTTGCGTTGTTTCATCGTTCGATTTTGTATAGCAATTATGACGAGCGTGGTAATTTTTCCTTTTAACTCGATTGGTATGTAAATGAAGACATGAACAATGTGATTTATGGCTAGCCTGATCTTAGTCAGAATATCAAGTAGAAAGAATCTTTCGTTTTGTTATGCACTGCCTGGTTCTTGCCTCTTCAATCTGTCATGTGTATCGTGTAATGATGATTAATTTTCATTGTGATCAACTACTGTAGTAGTATCCAACAAAGTGACATTCATACCTCATGCAGATGGTTATATTGTCGTTGATTGTGAAAAAAAGCAGAGTCAAGGCACTGGTGAAGGACAAACAAGCTGCCCTTGAAGCTTTTGGATTATACGTTGAGGTGGGCGGATTCAGATTTTAGAACGCTACATGCAGAATCCCGATAGTATGCTACATTTGCTATTATTTCTGTCCTCCGCGTTTTTTGAATTTAAAGGAACTGTTGGTTCTGTGGTTCTTATTTCATTTGCAAAGCCAGTAGCCGGTGACATAAGAGATGAGAAATCATTGAAGAAAGCTCTAAGAGAAGTTCGCACTATCATATGCCCAAAAGTATGCACATTAAATTCCAATCTGCTATTCCCTTTTCCCTAACTTACCCCCATCTCTTATTTTAAAATGCTCGAGGCAACATGATATATTGTTTTTGTATCTACTCTTGTTTTCATTAATTTTAGATGCACCTTTAGACTCTGGATTTATGCTCATCCTTAAAAAAAAAATGCCAGAAAGAATAATGTAGAAGGGAATAATAGTTATAGTAAGCTTGAAATAATCCTGGTGTTGGACATGTGGATAACTCATAAGATATATGGAGTAACGTGGGTCATCTTACATTGCTGGACCAGTTTCTTCCTGGCTTTTCCACTAGAAGCAAATAGACGATTGAATCTAAGTTCAAATTTTATCTCACGTGTTAACGAATATGAATAAAAAATTAAACAAACCACAACTTAACACCTCAAGTTTTTGAGTTTTGAGGTAGTTTAATATAGTATTAGAGTAGGAGGTCTTGTATTCAATTGTTTGTAACATCATTTCCTCCCATTGATAATCACTTATTGGTTTTTGTGTTAATTTTCAAGCCCACCAGTGATAGTGAGTGTTAAGAATATGAATAAAAGATCAAATATTCTGTAGCTTATCAAGCTAGGCTTTTTGTATGCAGTGTTGGTTTATCAAGAAGTTATGAGCCAGCATGTATTTGAACTCCTTTTAAGTTTCAACTTTCGTGTTACTATATTGATCTTTTACATCGAGTCTTATTAAAGGGAACCACGATGGTTATCCACTCATCAGGCTTGTTAATAATTGTATCACCAGGAAGGTTTCTTATCCAATGCTGGAAGCCTGAAAGGAGTGCAGCATATAGTTCTCTTATCGCAGGTATACTTCCCTCACCTTCCCCCAGTCTTTTTGACATGCATACGTATGTTGAAAACAAACAAATATCATGTAAAAACAGGAACAAAGCTCATTCCTTCGATCTATATTCATTGTCGCGACTTAATAAGGTTGCAGTTATCCAATTATAGAAGTGCTAGTGGTGTCCAAGCTCTTCTTAAAGGCAATGCTATAAAACTGGCTGAGCAAGACGAAGCAGTTCTAGTAGCCTCAGGAATTCCTTATACCATCATACGAGCTGGCTTGTTGCAAGATACACCTGGTGGAAATCAAGGATTCAGCTTTGAAGAGGTTCTTCTTCTGTCTTAAATGTTCCTCTATTAACAGCTGACTGATATAGTAAATAACTTTTGCTAATCCAAACATGACTGGTTTTTTTAAGGGAAACTTGATATTGAGAATTGAGATGAGACACTTTATTATATTTTTGCATCTAATGAATCATTGTATTGCGTATACGGTCTATTATTCAGGGTTGTGCAGCTACGGGAACGCTCAGCAAGGAGGATGCCTCCTTCATTTGTGTCGAAGCTACTGGTGCAGTTCCTAAAGGAGGGTTCTCGTTTGAGGTTGGTGTACTTAATGTTTATGCCGAGCGTCAAGGATTGGTTTTTTTTTATAAATATCATTTAACTTTTGAAAATTGGAGGTAGGGGATCCAGTTGTTGCGAGATAGAATGGAGTAAGTGTAAGATTGAGATGACTTTTGCAAGGATGAAAAATAATCTTTAGTCCAATAAAAGCACTTTTCAAAGTTTTTAATGTAAATAATAAAGGGTTTAGAGGAGGAATAAGTTCCAAGTCGTGGTGGACACTTGCTTAGGATTGAATATCTTACGAGTGACCTTTGCTACCAAATGTAGTTGGATTAAGCAGTTGCCCTATAAGAATAGTTGAGGCGTACACAACCTAGCCAAGAAACTCATGGACATCAATAAAAAAATATGCATGATGAGAAGTATTTTTCATTTAAAAATACTCTTTTTAGAATTCATCTCAAACTCACTCACATTGAAATAGAAATCTAAACGGGTCAGGTAAGATATTGACCTAAGACCACATCGAATGGTTCAAACTATTTCTTTTCTCACTTCATCTCTCCCACTTCATTGTAATCTCAAATTTTGTGTTTCTTGTATGTCACAACAGGTAGCCAAAGGAAATGAACAAGTTTCAGATTGGAAGGGGTGCTTGGCAAGATTACTGGAGAAAACAGAGCAGCCTCAATGA ATGGTCAGCAACCTCCTTCTCCATAGCGTCGCTCCGAGTCCATTCACTGAACTCAATCCAACTTTCAAATGGCAAAATTCCTCTCCGCTCTTATTCATCTCGAGAAGGCACGAACGACTTCGTTGCTTCGCCAAGAAGAAAATCGGCTTCATGGATCAAATTCGTGACTACATTGAAGGCGGTCCGAAGTTAAGGAAATGGTATGGGGCGCCTGACCTTGTTTCTAGAGATGATTCTGTCCTTAAAGACGAGGATGAATATGCTGAGGAAGATACAATCAGGGATGCGGTTTTAGTGACTGATGGGGATACTGAAATGGGTCAGATGGTTATATTGTCGTTGATTGTGAAAAAAAGCAGAGTCAAGGCACTGGTGAAGGACAAACAAGCTGCCCTTGAAGCTTTTGGATTATACGTTGAGCCAGTAGCCGGTGACATAAGAGATGAGAAATCATTGAAGAAAGCTCTAAGAGAAGTTCGCACTATCATATGCCCAAAAGAAGGTTTCTTATCCAATGCTGGAAGCCTGAAAGGAGTGCAGCATATAGTTCTCTTATCGCAGTTATCCAATTATAGAAGTGCTAGTGGTGTCCAAGCTCTTCTTAAAGGCAATGCTATAAAACTGGCTGAGCAAGACGAAGCAGTTCTAGTAGCCTCAGGAATTCCTTATACCATCATACGAGCTGGCTTGTTGCAAGATACACCTGGTGGAAATCAAGGATTCAGCTTTGAAGAGGGTTGTGCAGCTACGGGAACGCTCAGCAAGGAGGATGCCTCCTTCATTTGTGTCGAAGCTACTGGTGCAGTTCCTAAAGGAGGGTTCTCGTTTGAGGTAGCCAAAGGAAATGAACAAGTTTCAGATTGGAAGGGGTGCTTGGCAAGATTACTGGAGAAAACAGAGCAGCCTCAATGA ATGGTCAGCAACCTCCTTCTCCATAGCGTCGCTCCGAGTCCATTCACTGAACTCAATCCAACTTTCAAATGGCAAAATTCCTCTCCGCTCTTATTCATCTCGAGAAGGCACGAACGACTTCGTTGCTTCGCCAAGAAGAAAATCGGCTTCATGGATCAAATTCGTGACTACATTGAAGGCGGTCCGAAGTTAAGGAAATGGTATGGGGCGCCTGACCTTGTTTCTAGAGATGATTCTGTCCTTAAAGACGAGGATGAATATGCTGAGGAAGATACAATCAGGGATGCGGTTTTAGTGACTGATGGGGATACTGAAATGGGTCAGATGGTTATATTGTCGTTGATTGTGAAAAAAAGCAGAGTCAAGGCACTGGTGAAGGACAAACAAGCTGCCCTTGAAGCTTTTGGATTATACGTTGAGCCAGTAGCCGGTGACATAAGAGATGAGAAATCATTGAAGAAAGCTCTAAGAGAAGTTCGCACTATCATATGCCCAAAAGAAGGTTTCTTATCCAATGCTGGAAGCCTGAAAGGAGTGCAGCATATAGTTCTCTTATCGCAGTTATCCAATTATAGAAGTGCTAGTGGTGTCCAAGCTCTTCTTAAAGGCAATGCTATAAAACTGGCTGAGCAAGACGAAGCAGTTCTAGTAGCCTCAGGAATTCCTTATACCATCATACGAGCTGGCTTGTTGCAAGATACACCTGGTGGAAATCAAGGATTCAGCTTTGAAGAGGGTTGTGCAGCTACGGGAACGCTCAGCAAGGAGGATGCCTCCTTCATTTGTGTCGAAGCTACTGGTGCAGTTCCTAAAGGAGGGTTCTCGTTTGAGGTAGCCAAAGGAAATGAACAAGTTTCAGATTGGAAGGGGTGCTTGGCAAGATTACTGGAGAAAACAGAGCAGCCTCAATGA MVSNLLLHSVAPSPFTELNPTFKWQNSSPLLFISRRHERLRCFAKKKIGFMDQIRDYIEGGPKLRKWYGAPDLVSRDDSVLKDEDEYAEEDTIRDAVLVTDGDTEMGQMVILSLIVKKSRVKALVKDKQAALEAFGLYVEPVAGDIRDEKSLKKALREVRTIICPKEGFLSNAGSLKGVQHIVLLSQLSNYRSASGVQALLKGNAIKLAEQDEAVLVASGIPYTIIRAGLLQDTPGGNQGFSFEEGCAATGTLSKEDASFICVEATGAVPKGGFSFEVAKGNEQVSDWKGCLARLLEKTEQPQ Homology
BLAST of Tan0020629 vs. ExPASy Swiss-Prot
Match: O80934 (Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g37660 PE=1 SV=2) HSP 1 Score: 50.4 bits (119), Expect = 4.0e-05 Identity = 56/210 (26.67%), Postives = 84/210 (40.00%), Query Frame = 0
BLAST of Tan0020629 vs. ExPASy Swiss-Prot
Match: Q8W4D6 (Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF173 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 9.0e-05 Identity = 30/86 (34.88%), Postives = 45/86 (52.33%), Query Frame = 0
BLAST of Tan0020629 vs. ExPASy Swiss-Prot
Match: Q94EG6 (Uncharacterized protein At5g02240 OS=Arabidopsis thaliana OX=3702 GN=At5g02240 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 9.0e-05 Identity = 55/210 (26.19%), Postives = 80/210 (38.10%), Query Frame = 0
BLAST of Tan0020629 vs. NCBI nr
Match: KAG6593546.1 (hypothetical protein SDJN03_13022, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025888.1 hypothetical protein SDJN02_12386 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 552.0 bits (1421), Expect = 3.2e-153 Identity = 282/303 (93.07%), Postives = 289/303 (95.38%), Query Frame = 0
BLAST of Tan0020629 vs. NCBI nr
Match: XP_023000597.1 (uncharacterized protein At2g37660, chloroplastic [Cucurbita maxima]) HSP 1 Score: 548.1 bits (1411), Expect = 4.7e-152 Identity = 280/303 (92.41%), Postives = 288/303 (95.05%), Query Frame = 0
BLAST of Tan0020629 vs. NCBI nr
Match: XP_023514159.1 (uncharacterized protein At2g37660, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 544.7 bits (1402), Expect = 5.2e-151 Identity = 277/303 (91.42%), Postives = 287/303 (94.72%), Query Frame = 0
BLAST of Tan0020629 vs. NCBI nr
Match: XP_022964487.1 (uncharacterized protein LOC111464497 [Cucurbita moschata]) HSP 1 Score: 543.5 bits (1399), Expect = 1.2e-150 Identity = 277/303 (91.42%), Postives = 288/303 (95.05%), Query Frame = 0
BLAST of Tan0020629 vs. NCBI nr
Match: XP_022148368.1 (uncharacterized protein At5g02240 [Momordica charantia]) HSP 1 Score: 535.4 bits (1378), Expect = 3.1e-148 Identity = 268/303 (88.45%), Postives = 287/303 (94.72%), Query Frame = 0
BLAST of Tan0020629 vs. ExPASy TrEMBL
Match: A0A6J1KE28 (uncharacterized protein At2g37660, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111494837 PE=4 SV=1) HSP 1 Score: 548.1 bits (1411), Expect = 2.3e-152 Identity = 280/303 (92.41%), Postives = 288/303 (95.05%), Query Frame = 0
BLAST of Tan0020629 vs. ExPASy TrEMBL
Match: A0A6J1HHY2 (uncharacterized protein LOC111464497 OS=Cucurbita moschata OX=3662 GN=LOC111464497 PE=4 SV=1) HSP 1 Score: 543.5 bits (1399), Expect = 5.6e-151 Identity = 277/303 (91.42%), Postives = 288/303 (95.05%), Query Frame = 0
BLAST of Tan0020629 vs. ExPASy TrEMBL
Match: A0A6J1D3X2 (uncharacterized protein At5g02240 OS=Momordica charantia OX=3673 GN=LOC111017032 PE=4 SV=1) HSP 1 Score: 535.4 bits (1378), Expect = 1.5e-148 Identity = 268/303 (88.45%), Postives = 287/303 (94.72%), Query Frame = 0
BLAST of Tan0020629 vs. ExPASy TrEMBL
Match: A0A5A7UWE4 (NAD(P)-bd_dom domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001200 PE=4 SV=1) HSP 1 Score: 507.3 bits (1305), Expect = 4.4e-140 Identity = 256/303 (84.49%), Postives = 276/303 (91.09%), Query Frame = 0
BLAST of Tan0020629 vs. ExPASy TrEMBL
Match: A0A1S3CGP5 (uncharacterized protein At2g37660, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500698 PE=4 SV=1) HSP 1 Score: 505.8 bits (1301), Expect = 1.3e-139 Identity = 255/303 (84.16%), Postives = 275/303 (90.76%), Query Frame = 0
BLAST of Tan0020629 vs. TAIR 10
Match: AT1G72640.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 305.1 bits (780), Expect = 6.4e-83 Identity = 154/264 (58.33%), Postives = 195/264 (73.86%), Query Frame = 0
BLAST of Tan0020629 vs. TAIR 10
Match: AT1G72640.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 302.4 bits (773), Expect = 4.2e-82 Identity = 155/265 (58.49%), Postives = 196/265 (73.96%), Query Frame = 0
BLAST of Tan0020629 vs. TAIR 10
Match: AT2G37660.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06 Identity = 56/210 (26.67%), Postives = 84/210 (40.00%), Query Frame = 0
BLAST of Tan0020629 vs. TAIR 10
Match: AT1G16720.1 (high chlorophyll fluorescence phenotype 173 ) HSP 1 Score: 49.3 bits (116), Expect = 6.4e-06 Identity = 30/86 (34.88%), Postives = 45/86 (52.33%), Query Frame = 0
BLAST of Tan0020629 vs. TAIR 10
Match: AT5G02240.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 49.3 bits (116), Expect = 6.4e-06 Identity = 55/210 (26.19%), Postives = 80/210 (38.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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