Tan0020462 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAATCGTGCTGGTTTCTCCAGCCTCGACGTGTCCTCCATTGCCGTGGCTACAAAGACACGAACTTCGCTAAAGTGAGCGCGTGAGTGCGAGAAATTACCGCTCATTCCCAAGCGGAAACCGCCTCGCCTCGCACTTGCAGTCTCCCACTCTCTTCTCCTCCAATATCAGAGCTTCTCAAACCAGGATTTTCAAAGCCCCCAATACTCCTCTTTTCTTCTAATGGATTTGCAGCCGAACGAATTCGATCGCCTACTTTTCTTCGAGCACGCTCGCAAAAATGCCGAAGCTACTTACGCCCAGAATCCCCTCGATGCCGATGTGAGTTTTCCCCTTCTTTTCGCCTCTTAATTTGCTCATCGGATTGTTTAGTTGATTTTGTGGTTGTTTTTTTTTTGTTATTTTTGTTGGGTTTGTGGAGGATTAAGTGAGGTTCGTTTCTGTGTATAAGGGTTTGGTTAAATTTGTATAAATTGTTATGAAATATAGGGTTGGTTTCAATTGTGTTTGAATTTTGAGTTTGAATTTGCTTTTTAGTTGTTTTTAGAAATCTTTTTGTGGTCGTCATTTATCCATAGTAGCACAATTATCTTCTCTACACAGGGTGACTTGCTGCTATTACTTGATATTTTATAGCCATGACCTCATTTCTTGTTAGTTGATCGCGAGTTAAGGCCCTAATTTTTGCTTTTTCATTGTTAGAGGGAGTGAAAATAAAGAGAAGTAATGGCTCCCTGTATTTTTTTTTCCTCCCCCAAACCTAAATATCCAAGTTACCATTTGGCTGACAGCTTAGGATTCCGTTTAAATTTAATGGGGAGCTAAAGCTTAAGGGTTAAAATGAAATGCTTGAAACAATAGGGACATAACTGCAAATAATCCTGTAGTTTCTTATATAATGTGGTCTTTTTTCTTTAATGGGTGTGATCTAAAGTTTACGGCCAAAGCGTAGCTCAATGAGGTTGGAGGTTCAAATCTCCATACCCCATTTATTATACTAAAAAATGGGTGTGATGTAAAGTTTATGACTGTTGAGCTGTATTTGATAATCAAACATGGATGGGCTGTTATGTAGAATTTGACGAGATGGGCAGGAGCTTTGTTAGAGCTATCTCAGTTTCAGAGCGTTCCAGAGTCGAAGAAGATGATTCTAGGTATCTTTTTATTCTACGAAGTCAGATGATTAAGCATGGGAATTGAGAATATTTTTGCTTGACTTTAATTTGTGGCTGACCTGGAGTTTTTCTTGATTCATTTTCTACCTATGCATTTTCAATGCAGCTCTTTCTTCTAATTTAATGATTTTGGTGAAAGCCATTGAGTATATTGTGGATTAATTTGTAATGAGGGTTGAGACAGATTCAATAGCAAAGCTGGAGGAGGCATTGTTGATTAACCCCAAGAAGCATGATGCTCTTTGGTGCCTAGGAAATGCTTATACTACCCATGCCTTTATGAATCCAAACCAGGATGAGGCAAAGGATTATTTTGATAAGGCCTCAATATACTTTCAGCAAGCCGTGGATGAGGTACTAAGCCCAAAAAACCTTTGAACGAGCTTATAAATATGCATTTCTTGATGGCTTTTCTATTTTAACGTGGTGATTGCATTCAGGATCCTGGAAATGAACTTTATCAAAAATCTTTGGATGTGACTGCTAAGGTACTTCGACATTCTTTGGTGCAATTTGAATATCTTTCTATTTTCAAGAATACTAAGCTCCTTTCAGTGGCTTTGAAATGAGAGAATCTGTTTGTTTCATTTATGCTTTGATAAAAAGTTATCTACTAATCTATGTTTATAACCACATTAAAGATAGGACAATACTTCCTTGTTGACGGCCACCATTCAATTTTTGACCGCTGGGAGAGAGGGGGAGAGAGAGGAGATACTTTCCTTTTTCTTAATAAAAAGTAAACATGTGTGACAAAATTAGCCGTGGTTGCCACCCAGTCATAAGAGAAGTATTTTCCATTAGAGATCTTGAAATGAAGACAGAACCAAGATTGGTGGAACAAACATGTTTGATTGTTTTCATATAGTAAACTAGAACTTGACTATTTACTTAGTATTTTGTTTCTATCTTTTGTTATGCTCATGGCCTATTCTAATTTCGTGGATCGTGCCTTTTAGGCCCCGGAATTGTATGCAGAGATCCATAAGCATGGGCTTGTTCAACAGACAACTGGAACAACCGAACCGTCTACTTCATCTAGTACTAAGGTATTTTTTATTGCTTAAGGACGATAGCATATCAGGTTACTTTTTGGTTTTCATCTTCTATAGACAGGATTAAGGAGGGGTTTTCCATTGCTATGTTCTACAACTGCATGCTTTATATATTTTCTCTCTGTTTCCTATAAAATACATTTCCTTGACTTGTTAAAAAAAGGTACCTTCATCTTGCTATATTTTCCATGCTTCCAAGTTGGTAGCATCATTTTCGAGAAGTTATTTACAATTCGAAAACAAAATTAGAATTATACATGATAACAATTTAGTGAATCTTTAGACTCCAGACTCTACTGTAAGGTTTCCTTTACAATATATTGGAAATCATAAGATGTTCTTGCTCTAGCTCTAAGGCGATACAAAACCTCCCAGCCAATTCAAGAGGGCTAGTAATCTCTCCTTCCTCTCACCAAGACGATTCTCACAAAAAGCATATAAAAATGAAAATAAACAGGACTCCATGCTAGATACTACTAACAAACCAAAATGTTCCCTCATTCCCTACAGGTCAGTGGTTCTTCCCCCCTTCAACAAACGCTCATTCCCACAAACCTGACCCTCAACTAACTGGTTGAGTCTGAATTGCCTTTCGTGCCTCTTCTCTGAACACTACAATTGGTGGCCTAACATGTAGATCTTCATTTAGACTTGGGCATGTTAGTGTTGCTTATTTGTTTGGAGCACCTCTAGAATAAGTACTTTTGGGCAAAGTAGGGATTACAAACACTGTAGTAAAAAAAAAATACTTAATAGCATAGTATTTTGATGTTGGGTTCTATACTCTTAAAAGTGTTTTTAGTGCTTCGGTCAATCAGGTAGGCAAAATTCAAAAGCACTCTACAAGTTCTTTCTGAAAAAACACGTTTACTATTTTTTTCTTTTCTTTTCCAGGGTAACACTTATTTTAACCTGAAACGTGATATTATGTGTAGGAAGTAGTTTTGAGCCTGTCAAAAGCTCTCGCAAACAAGCATAGCTTTAATTTAATTATATCGTAGTCTTGGATTGGAGTTCTTTCCTGTAGTTAGTGTAGGAACTCCTTTCGGAAACTAATTTTTTTTTGTATGCTCTTGTACATTCTTTCATTTTGCTCAATAAAGTCTCAGCTTCTAGCCAAAAAGAACAAATCATAATCAGTTTACAAGCTAGCTCTTAACTTCATGCTCTTTCCTTTTATCTAGACATCAAAGAAAAAGAAGAGCAGTGATCTGAAGTATGACATATTTGGATGGATAATACTTGCTGTTGGCATAGTTGCATGGGTTGGGTTTGCGAAATCTCACGTCCCGTCCCCACCGCCGCCCCGATAAGTCATCGTGTTAGAAGCAGTCCGAAGGCATTTATCAGATTTAGAGCTGATATTTGTAGAGATGAGAATTATATATCGATCATCCGTTGTTCTTTTTTTTCTCTCTCCTTGTTACTGTTATTTTTATCAATTTCATTGTCATTTGAGTCGTTTTTGTTTCTGCTTTTTTTGCGGTATGACTGATAAATAAGTTGGGATTGAATACTGTCTAGAGGGGGTTGGTTGGGAATCCTTCTGCTGATTGTTTCTTAACTATTTGGTGGGTTTGTAGGGTAGAAAGGAATTGGAATGGGTCATTTTAGGCTCGTTTGATAATGTTCTCATTTCATGTTTCTTGTTTCCGTTTTTCATTTTTCAAGAAGTAAGCTTGTTTCATAAACGTTTTTATTTTTTGTTCCTAAATTTTTAGAAATGTTTCTAAAAATGGAATAAATTTTGAGGAATTATACTTCGC GAGAATCGTGCTGGTTTCTCCAGCCTCGACGTGTCCTCCATTGCCGTGGCTACAAAGACACGAACTTCGCTAAAGTGAGCGCGTGAGTGCGAGAAATTACCGCTCATTCCCAAGCGGAAACCGCCTCGCCTCGCACTTGCAGTCTCCCACTCTCTTCTCCTCCAATATCAGAGCTTCTCAAACCAGGATTTTCAAAGCCCCCAATACTCCTCTTTTCTTCTAATGGATTTGCAGCCGAACGAATTCGATCGCCTACTTTTCTTCGAGCACGCTCGCAAAAATGCCGAAGCTACTTACGCCCAGAATCCCCTCGATGCCGATAATTTGACGAGATGGGCAGGAGCTTTGTTAGAGCTATCTCAGTTTCAGAGCGTTCCAGAGTCGAAGAAGATGATTCTAGATTCAATAGCAAAGCTGGAGGAGGCATTGTTGATTAACCCCAAGAAGCATGATGCTCTTTGGTGCCTAGGAAATGCTTATACTACCCATGCCTTTATGAATCCAAACCAGGATGAGGCAAAGGATTATTTTGATAAGGCCTCAATATACTTTCAGCAAGCCGTGGATGAGGATCCTGGAAATGAACTTTATCAAAAATCTTTGGATGTGACTGCTAAGGCCCCGGAATTGTATGCAGAGATCCATAAGCATGGGCTTGTTCAACAGACAACTGGAACAACCGAACCGTCTACTTCATCTAGTACTAAGACATCAAAGAAAAAGAAGAGCAGTGATCTGAAGTATGACATATTTGGATGGATAATACTTGCTGTTGGCATAGTTGCATGGGTTGGGTTTGCGAAATCTCACGTCCCGTCCCCACCGCCGCCCCGATAAGTCATCGTGTTAGAAGCAGTCCGAAGGCATTTATCAGATTTAGAGCTGATATTTGTAGAGATGAGAATTATATATCGATCATCCGTTGTTCTTTTTTTTCTCTCTCCTTGTTACTGTTATTTTTATCAATTTCATTGTCATTTGAGTCGTTTTTGTTTCTGCTTTTTTTGCGGTATGACTGATAAATAAGTTGGGATTGAATACTGTCTAGAGGGGGTTGGTTGGGAATCCTTCTGCTGATTGTTTCTTAACTATTTGGTGGGTTTGTAGGGTAGAAAGGAATTGGAATGGGTCATTTTAGGCTCGTTTGATAATGTTCTCATTTCATGTTTCTTGTTTCCGTTTTTCATTTTTCAAGAAGTAAGCTTGTTTCATAAACGTTTTTATTTTTTGTTCCTAAATTTTTAGAAATGTTTCTAAAAATGGAATAAATTTTGAGGAATTATACTTCGC ATGGATTTGCAGCCGAACGAATTCGATCGCCTACTTTTCTTCGAGCACGCTCGCAAAAATGCCGAAGCTACTTACGCCCAGAATCCCCTCGATGCCGATAATTTGACGAGATGGGCAGGAGCTTTGTTAGAGCTATCTCAGTTTCAGAGCGTTCCAGAGTCGAAGAAGATGATTCTAGATTCAATAGCAAAGCTGGAGGAGGCATTGTTGATTAACCCCAAGAAGCATGATGCTCTTTGGTGCCTAGGAAATGCTTATACTACCCATGCCTTTATGAATCCAAACCAGGATGAGGCAAAGGATTATTTTGATAAGGCCTCAATATACTTTCAGCAAGCCGTGGATGAGGATCCTGGAAATGAACTTTATCAAAAATCTTTGGATGTGACTGCTAAGGCCCCGGAATTGTATGCAGAGATCCATAAGCATGGGCTTGTTCAACAGACAACTGGAACAACCGAACCGTCTACTTCATCTAGTACTAAGACATCAAAGAAAAAGAAGAGCAGTGATCTGAAGTATGACATATTTGGATGGATAATACTTGCTGTTGGCATAGTTGCATGGGTTGGGTTTGCGAAATCTCACGTCCCGTCCCCACCGCCGCCCCGATAA MDLQPNEFDRLLFFEHARKNAEATYAQNPLDADNLTRWAGALLELSQFQSVPESKKMILDSIAKLEEALLINPKKHDALWCLGNAYTTHAFMNPNQDEAKDYFDKASIYFQQAVDEDPGNELYQKSLDVTAKAPELYAEIHKHGLVQQTTGTTEPSTSSSTKTSKKKKSSDLKYDIFGWIILAVGIVAWVGFAKSHVPSPPPPR Homology
BLAST of Tan0020462 vs. ExPASy Swiss-Prot
Match: P92792 (Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum OX=4113 GN=TOM20 PE=1 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 1.5e-83 Identity = 152/203 (74.88%), Postives = 178/203 (87.68%), Query Frame = 0
BLAST of Tan0020462 vs. ExPASy Swiss-Prot
Match: P82874 (Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis thaliana OX=3702 GN=TOM20-3 PE=1 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 9.8e-64 Identity = 117/196 (59.69%), Postives = 148/196 (75.51%), Query Frame = 0
BLAST of Tan0020462 vs. ExPASy Swiss-Prot
Match: P82873 (Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis thaliana OX=3702 GN=TOM20-2 PE=1 SV=2) HSP 1 Score: 232.3 bits (591), Expect = 5.0e-60 Identity = 114/208 (54.81%), Postives = 150/208 (72.12%), Query Frame = 0
BLAST of Tan0020462 vs. ExPASy Swiss-Prot
Match: P82805 (Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis thaliana OX=3702 GN=TOM20-4 PE=1 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 5.2e-57 Identity = 117/198 (59.09%), Postives = 150/198 (75.76%), Query Frame = 0
BLAST of Tan0020462 vs. ExPASy Swiss-Prot
Match: A2WYG9 (Probable mitochondrial import receptor subunit TOM20 OS=Oryza sativa subsp. indica OX=39946 GN=TOM20 PE=2 SV=2) HSP 1 Score: 214.9 bits (546), Expect = 8.3e-55 Identity = 107/196 (54.59%), Postives = 145/196 (73.98%), Query Frame = 0
BLAST of Tan0020462 vs. NCBI nr
Match: KAG6581098.1 (Mitochondrial import receptor subunit TOM20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102 Identity = 185/203 (91.13%), Postives = 193/203 (95.07%), Query Frame = 0
BLAST of Tan0020462 vs. NCBI nr
Match: XP_022935684.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita moschata] >XP_023526202.1 mitochondrial import receptor subunit TOM20-like [Cucurbita pepo subsp. pepo] >KAG7017828.1 Mitochondrial import receptor subunit TOM20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102 Identity = 185/203 (91.13%), Postives = 193/203 (95.07%), Query Frame = 0
BLAST of Tan0020462 vs. NCBI nr
Match: XP_022984139.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita maxima]) HSP 1 Score: 382.1 bits (980), Expect = 3.0e-102 Identity = 184/203 (90.64%), Postives = 193/203 (95.07%), Query Frame = 0
BLAST of Tan0020462 vs. NCBI nr
Match: XP_022989712.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita maxima]) HSP 1 Score: 377.1 bits (967), Expect = 9.6e-101 Identity = 182/204 (89.22%), Postives = 193/204 (94.61%), Query Frame = 0
BLAST of Tan0020462 vs. NCBI nr
Match: XP_023529318.1 (mitochondrial import receptor subunit TOM20-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 376.7 bits (966), Expect = 1.3e-100 Identity = 182/204 (89.22%), Postives = 192/204 (94.12%), Query Frame = 0
BLAST of Tan0020462 vs. ExPASy TrEMBL
Match: A0A6J1F645 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita moschata OX=3662 GN=LOC111442468 PE=3 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 6.5e-103 Identity = 185/203 (91.13%), Postives = 193/203 (95.07%), Query Frame = 0
BLAST of Tan0020462 vs. ExPASy TrEMBL
Match: A0A6J1J9L2 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita maxima OX=3661 GN=LOC111482523 PE=3 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.5e-102 Identity = 184/203 (90.64%), Postives = 193/203 (95.07%), Query Frame = 0
BLAST of Tan0020462 vs. ExPASy TrEMBL
Match: A0A6J1JGL3 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita maxima OX=3661 GN=LOC111486712 PE=3 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 4.7e-101 Identity = 182/204 (89.22%), Postives = 193/204 (94.61%), Query Frame = 0
BLAST of Tan0020462 vs. ExPASy TrEMBL
Match: A0A6J1ERZ1 (mitochondrial import receptor subunit TOM20-like OS=Cucurbita moschata OX=3662 GN=LOC111435326 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.6e-99 Identity = 180/204 (88.24%), Postives = 191/204 (93.63%), Query Frame = 0
BLAST of Tan0020462 vs. ExPASy TrEMBL
Match: A0A6J1DQV5 (mitochondrial import receptor subunit TOM20 OS=Momordica charantia OX=3673 GN=LOC111023409 PE=3 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.9e-94 Identity = 173/204 (84.80%), Postives = 186/204 (91.18%), Query Frame = 0
BLAST of Tan0020462 vs. TAIR 10
Match: AT3G27080.1 (translocase of outer membrane 20 kDa subunit 3 ) HSP 1 Score: 244.6 bits (623), Expect = 7.0e-65 Identity = 117/196 (59.69%), Postives = 148/196 (75.51%), Query Frame = 0
BLAST of Tan0020462 vs. TAIR 10
Match: AT1G27390.1 (translocase outer membrane 20-2 ) HSP 1 Score: 232.3 bits (591), Expect = 3.6e-61 Identity = 114/208 (54.81%), Postives = 150/208 (72.12%), Query Frame = 0
BLAST of Tan0020462 vs. TAIR 10
Match: AT5G40930.1 (translocase of outer membrane 20-4 ) HSP 1 Score: 222.2 bits (565), Expect = 3.7e-58 Identity = 117/198 (59.09%), Postives = 150/198 (75.76%), Query Frame = 0
BLAST of Tan0020462 vs. TAIR 10
Match: AT3G27070.1 (translocase outer membrane 20-1 ) HSP 1 Score: 191.4 bits (485), Expect = 7.0e-49 Identity = 98/186 (52.69%), Postives = 130/186 (69.89%), Query Frame = 0
BLAST of Tan0020462 vs. TAIR 10
Match: AT3G27070.2 (translocase outer membrane 20-1 ) HSP 1 Score: 126.7 bits (317), Expect = 2.1e-29 Identity = 63/134 (47.01%), Postives = 91/134 (67.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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