
Tan0020374 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTTTTATTATCCTCAAAAACTTAACAACCACAATGTCCTCTCAAAAACTAAAAGAGAGGAAATCCTAGCAACCACTCTTTCATCTCCCTTTTAGCACCTCAGTCCTGCCACCGCCACCGTCGCCTCTCTCCTGTTCAGTGCTGCCGGCGCCGCCTATCACTCATTCGATCAGGAACACTGTTTCGATCTCTCTCCCCATCAACGCTGAAAGAAAGCAGCTTCTTAGTGCCAGGGCTCTGATATCTGTAGGATCCTCATCTGAATAATGGGTTTGCACCTCATCTGAAAATTCTTTTGGATTCTCAATTTTTGCCTTTTTTGGTTTTTTCATTCTTTGGATTGCTGCAACTTTTACTTTTTTTTTTTCTTTGATGATTTGAGGAATCTGTTATGTTAGGTTGTTTTGTGCTTGCTTGGATTATTCTACTTGAGAATTTTGTGTGCTGGGAAGTCTTTCTCATATGGGTTCATGTTCAGCCGGTAGTTAAAGTTTAATTTAGTGTAACTTTTGATCGTTCGTGGAATGGGTGTCAAGTAAAGCATTTGATAGACTCTTAGTGGTCGATAGTTGTCAATACAGGAGAACAGGATGATCAGAGCTTAGAATTCATTTTTCTGAACATTTGGCCTGTTTGTAACCATTTTATTTTTGGTTTTCTATTTTTGAAAATTATGTTTGTTTCCTTACAATTTATTGGTGAGTTTTTTGTCTTCCTTCAAAACACATTTGAATTCTAAGCCAAATTTCTAAAACAAAATCAAGTTTTTAAAAACTATTTTTCTAGGCCCCGTTGATAACCATTTTTGTTTTTAAAAATATGTTTGTTTTCTCCTTATTTCTCTACCATGGGTTTCATGTTTCTTAAGAAAACATTTGCAATATTAGACAAATTTAAAAAAAAAACAATTTTTTTGAAATTTACTTCTTCTTTTTTTTTTTTTTTAATTTTCAAAACTTGTCATGTTTTCAAAAAACATAGGAGGTAAAAAGTAGATAACAAAACAAGGAAACCCATAGGTAGAAGCAGTTTTATAGGCTTAATTTTCAAAAACCAAAAATGAAAAACTAATAGTTATAAAATGAGACCTTTGTTTTTTTTGGCATAAAAAACAATTTCATTGATAAATGAAATAAAGGCAAGAATGCCACACACTTTAGTGTGAATTACAAAAATAGTTTCCAATTGGAAAGAAAATAAGACGAGGTATAATGACTAAATGGTTGAACCGACTTGCACCAATGGAAAACACTAATTAAGACATTATCCATAAAATGAGAAAAAAGTATGAGAGACCCCCCTAAAGCTTCGACCGATACTCCAGAGAAAATTACGAACCAAAGAACCATTGAAAGGGTGACCAACAAGATGGATGAGAGAAATACAGAGATATTATTTGGAAGAGTTAAAGCCCATCCAAACTCTGCTAATACTTGCATCCAAAACTGGTAACCAAAGCGACAACGCACAAAAAGATGTTCAGCCGACTCGGAACTTGCTCCACACATAACACACCAAGATGGGACCTTAGTTTTAAAATTTTTCTTGGTTTGATAAACATTTTTAAAAATAGGTGATAAAGCATGAATACATAAGTAGAAGTTGAGTTTATAAGCTTAATTTAAAAAAAAAAAGCAAAAAATCAACAAAATTTTTATCGAACTAGGCTTTTGGGACTATGTAGTTATGCATTTCTATAGAATTCTTTTTCACCTTTGCAACTTGACGTCAGGAATAACTGTGTTGAATGTGACAACTTGGTAGGTCATGGCAGAATCAAACTCACCTGGTTCGTTTCAACCTCCTCCAGTTCCCCCACTTCCTATGGTTATCGATGGGGCAGATCATGATGTAGCGCTTGCCTCTTGTGAGTTCTTTACTCGTCGAGAAGTACTCCAGCGTCGGTCCCGGAGAGTGAAGCAACTTTGTAGAATCTATAGGGCACTTTACTGGGCTTTAATGGACGATCTCAAGCGCAAGTACCGGGAGTATTGTTGGACATATGGCAAGAGTCCATTTAAGGAGGATGAGAAGGAGGCCGAGGGCATTGGTGATTATCCGGAGGGTATTGGGGAGAATGGAAAGCTAGGATCAGGTTCTGTGACAGTTGATGAGATTAGAAAGTGTGAGGTCACAGGTTGCAAGGCAAAGGCGATGGCATTGACAGAATACTGTCATGCTCATATCCTCTCGGATAAAAGGCAGAGGCTCTACAAGGGTTGTACCTTTGCAATCAAGAGGTTTGCATTCTATATGACTGATTTCTTTCTGCTGCATAGTAGTACTATTAATTTTCTACTTAATAAGCAATAGCAATAAATAGAGAGTGATTATCTATTATTGATATCAGTATGAAGATTTATGATCTTGCTCTGCTATGCATTTTACTGACAGTTTATTCATAAATTAATTTTCTTGATTTGTTTTTTCTTTGGACTGTCTTAGATACAATTTTGTTAGAGAGTCGATCCTAAGGATAAAGGCATAAAGGATTTTCTATTACTCAAAATCCTCCCAAATTCCTAGTGTAGAATATAGCACCATTTCCCACCCTCTTAAGAATTTACCAAATGAAAACCAAGTGGTGAGAAATCAAGCAAAGATATTATTACAATACTTATGGGAAATTATTAATACCCGTCTCGTTTAGTTGGATTTGGATTGGAGTTTTTTCTTAGTTAATTTTAGACTCCTTTTTGGTGCTTTTTTTTTTGGTATGTTTGTGTATATTCTTTCATTTCTTCGATGAAAGGAAGTTTCATATATATAGGAAATTATATTGTTCCCAAGGCCTTTAGGCTGTTGTGTGTCCCAATCCCAAATTATGATAGCAAGGTAAGTGAGCTGAATCTAATTAATAAAATGGCAGTCTCCTCTAGGATATATCTTTAAGAAACTCTCTAATATTTTTAGTGATCCATGTCATTCACTCGGTATGAGTCCTACAAAGTAAGAGGCTAGTTTAGGCTCCATTGATGACTATTTGGTTTTTGGTTTTTGAAAATTGTACTTGTTTTCTCATCATTTCTTTACAATGATTTTCCTCTCAAGAAAACACTTGAATTCTTAGCTAAATTTTCAAAACAAAAATAAATTTTTGGAAACTATTTTTTTTAGTTTTCAAAACCCGACATGGTTTTTTAAAACACAGGTAAAAGTAAAAGGTAGATAAGAAAACCTGAAAAACCATAGGTGAAAGTAGTATTTATAGACTTAATTTCTAAAAACAAAATGGTTATCAAATGGGACCTTAGGTGTTTTATTTGAGTATTTTTAAGAACATTTTTACCATTGAAAAGTAGGTAACATGGTTGAGCTGAATTAGACGGTCACACCATTTTATTGAATTGATCTGAAGTTGTGATGTCCACACTCTTTGATTGGCCTTTTGCATTTGCAACCTTTTTTGGAATTAGGAGCAATGTACATCGACATTTAGGATTATAGGTAGGTAGGCATAGATGTCTTGAGTTGAGGAAACTATAATTTGGTGCTTGACTTGTCGATTTATTATCATTAGTTTTGATTGGATCAACCTTCTATTGCAACAATATGATGTTCTTTTTCATTTTTGATTAAAAAGAAATTTCTTTCATTTACAGTATGCAGTCAGGACCCCTTCTATGTTCAAAGCCTGTTTTAAGATCTACTGTTCCCTGCTATTGCCCTGGTCATCTACAAAAAGGCGAAAAATGCTTAGCTAGAGATTTAAGAAAAGCAGGTCTTAACGTCTCCTCTACTAGCAAGCTTCGTCCTAATTTCCATGTATTGTTAGCTGAATACATAAACCAGATACAACTTAAGAGGAGGGCGGCGAGAAAGGCAATTGCTGTTAAAACTGAGAGTAACTGAGAAAGTGAAGATTAATTAGGCCCTCAGTTTGAATAAGAATACGTAGTTTGCGGTCGGTCGGTATGTGCAGGGTGTATTCAATCCAACCTCCCAATAGAAGAATTTGTTGATAAAATCAATTTCGTGTATGTTATGATCGCTTCTTTCTTCTCTTTGCACATTTGTCGAGTATTATTCGAACAAAAGGTGGATGTGATGTGCATTTGATTGCCGAATGTAGGGATGTACATTCCTTTGTTTTTGAGAAGGATGTTTTAGTTTTAGCCTCCTTTCCTAACTTGCAGTAGAGTAACGTTGTTGGGGATACCTAATATTAGTTATACTTATAATGGTAAAAGAAAGTTATCTAATTGTGCTATTTGATGACGG AGTTTTTATTATCCTCAAAAACTTAACAACCACAATGTCCTCTCAAAAACTAAAAGAGAGGAAATCCTAGCAACCACTCTTTCATCTCCCTTTTAGCACCTCAGTCCTGCCACCGCCACCGTCGCCTCTCTCCTGTTCAGTGCTGCCGGCGCCGCCTATCACTCATTCGATCAGGAACACTGTTTCGATCTCTCTCCCCATCAACGCTGAAAGAAAGCAGCTTCTTAGTGCCAGGGCTCTGATATCTGTAGGATCCTCATCTGAATAATGGGTCATGGCAGAATCAAACTCACCTGGTTCGTTTCAACCTCCTCCAGTTCCCCCACTTCCTATGGTTATCGATGGGGCAGATCATGATGTAGCGCTTGCCTCTTGTGAGTTCTTTACTCGTCGAGAAGTACTCCAGCGTCGGTCCCGGAGAGTGAAGCAACTTTGTAGAATCTATAGGGCACTTTACTGGGCTTTAATGGACGATCTCAAGCGCAAGTACCGGGAGTATTGTTGGACATATGGCAAGAGTCCATTTAAGGAGGATGAGAAGGAGGCCGAGGGCATTGGTGATTATCCGGAGGGTATTGGGGAGAATGGAAAGCTAGGATCAGGTTCTGTGACAGTTGATGAGATTAGAAAGTGTGAGGTCACAGGTTGCAAGGCAAAGGCGATGGCATTGACAGAATACTGTCATGCTCATATCCTCTCGGATAAAAGGCAGAGGCTCTACAAGGGTTGTACCTTTGCAATCAAGAGTATGCAGTCAGGACCCCTTCTATGTTCAAAGCCTGTTTTAAGATCTACTGTTCCCTGCTATTGCCCTGGTCATCTACAAAAAGGCGAAAAATGCTTAGCTAGAGATTTAAGAAAAGCAGGTCTTAACGTCTCCTCTACTAGCAAGCTTCGTCCTAATTTCCATGTATTGTTAGCTGAATACATAAACCAGATACAACTTAAGAGGAGGGCGGCGAGAAAGGCAATTGCTGTTAAAACTGAGAGTAACTGAGAAAGTGAAGATTAATTAGGCCCTCAGTTTGAATAAGAATACGTAGTTTGCGGTCGGTCGGTATGTGCAGGGTGTATTCAATCCAACCTCCCAATAGAAGAATTTGTTGATAAAATCAATTTCGTGTATGTTATGATCGCTTCTTTCTTCTCTTTGCACATTTGTCGAGTATTATTCGAACAAAAGGTGGATGTGATGTGCATTTGATTGCCGAATGTAGGGATGTACATTCCTTTGTTTTTGAGAAGGATGTTTTAGTTTTAGCCTCCTTTCCTAACTTGCAGTAGAGTAACGTTGTTGGGGATACCTAATATTAGTTATACTTATAATGGTAAAAGAAAGTTATCTAATTGTGCTATTTGATGACGG ATGGCAGAATCAAACTCACCTGGTTCGTTTCAACCTCCTCCAGTTCCCCCACTTCCTATGGTTATCGATGGGGCAGATCATGATGTAGCGCTTGCCTCTTGTGAGTTCTTTACTCGTCGAGAAGTACTCCAGCGTCGGTCCCGGAGAGTGAAGCAACTTTGTAGAATCTATAGGGCACTTTACTGGGCTTTAATGGACGATCTCAAGCGCAAGTACCGGGAGTATTGTTGGACATATGGCAAGAGTCCATTTAAGGAGGATGAGAAGGAGGCCGAGGGCATTGGTGATTATCCGGAGGGTATTGGGGAGAATGGAAAGCTAGGATCAGGTTCTGTGACAGTTGATGAGATTAGAAAGTGTGAGGTCACAGGTTGCAAGGCAAAGGCGATGGCATTGACAGAATACTGTCATGCTCATATCCTCTCGGATAAAAGGCAGAGGCTCTACAAGGGTTGTACCTTTGCAATCAAGAGTATGCAGTCAGGACCCCTTCTATGTTCAAAGCCTGTTTTAAGATCTACTGTTCCCTGCTATTGCCCTGGTCATCTACAAAAAGGCGAAAAATGCTTAGCTAGAGATTTAAGAAAAGCAGGTCTTAACGTCTCCTCTACTAGCAAGCTTCGTCCTAATTTCCATGTATTGTTAGCTGAATACATAAACCAGATACAACTTAAGAGGAGGGCGGCGAGAAAGGCAATTGCTGTTAAAACTGAGAGTAACTGA MAESNSPGSFQPPPVPPLPMVIDGADHDVALASCEFFTRREVLQRRSRRVKQLCRIYRALYWALMDDLKRKYREYCWTYGKSPFKEDEKEAEGIGDYPEGIGENGKLGSGSVTVDEIRKCEVTGCKAKAMALTEYCHAHILSDKRQRLYKGCTFAIKSMQSGPLLCSKPVLRSTVPCYCPGHLQKGEKCLARDLRKAGLNVSSTSKLRPNFHVLLAEYINQIQLKRRAARKAIAVKTESN Homology
BLAST of Tan0020374 vs. ExPASy Swiss-Prot
Match: Q54J07 (INO80 complex subunit D OS=Dictyostelium discoideum OX=44689 GN=DDB_G0288447 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.4e-08 Identity = 45/183 (24.59%), Postives = 72/183 (39.34%), Query Frame = 0
BLAST of Tan0020374 vs. NCBI nr
Match: XP_022953677.1 (INO80 complex subunit D-like [Cucurbita moschata] >XP_022991632.1 INO80 complex subunit D-like [Cucurbita maxima] >XP_023548640.1 INO80 complex subunit D-like [Cucurbita pepo subsp. pepo] >KAG7014493.1 INO80 complex subunit D, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 438.7 bits (1127), Expect = 3.2e-119 Identity = 214/241 (88.80%), Postives = 228/241 (94.61%), Query Frame = 0
BLAST of Tan0020374 vs. NCBI nr
Match: KAG6575969.1 (INO80 complex subunit D, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 438.7 bits (1127), Expect = 3.2e-119 Identity = 214/241 (88.80%), Postives = 228/241 (94.61%), Query Frame = 0
BLAST of Tan0020374 vs. NCBI nr
Match: XP_022150569.1 (INO80 complex subunit D-like isoform X1 [Momordica charantia] >XP_022150579.1 INO80 complex subunit D-like isoform X1 [Momordica charantia] >XP_022150584.1 INO80 complex subunit D-like isoform X1 [Momordica charantia]) HSP 1 Score: 415.6 bits (1067), Expect = 2.9e-112 Identity = 201/241 (83.40%), Postives = 217/241 (90.04%), Query Frame = 0
BLAST of Tan0020374 vs. NCBI nr
Match: XP_038896100.1 (INO80 complex subunit D-like isoform X2 [Benincasa hispida] >XP_038896101.1 INO80 complex subunit D-like isoform X2 [Benincasa hispida]) HSP 1 Score: 413.7 bits (1062), Expect = 1.1e-111 Identity = 203/241 (84.23%), Postives = 221/241 (91.70%), Query Frame = 0
BLAST of Tan0020374 vs. NCBI nr
Match: XP_038896099.1 (uncharacterized protein LOC120084404 isoform X1 [Benincasa hispida]) HSP 1 Score: 413.7 bits (1062), Expect = 1.1e-111 Identity = 203/241 (84.23%), Postives = 221/241 (91.70%), Query Frame = 0
BLAST of Tan0020374 vs. ExPASy TrEMBL
Match: A0A6J1JMD6 (KAT8 regulatory NSL complex subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111488191 PE=4 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 1.5e-119 Identity = 214/241 (88.80%), Postives = 228/241 (94.61%), Query Frame = 0
BLAST of Tan0020374 vs. ExPASy TrEMBL
Match: A0A6J1GNX0 (KAT8 regulatory NSL complex subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111456134 PE=4 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 1.5e-119 Identity = 214/241 (88.80%), Postives = 228/241 (94.61%), Query Frame = 0
BLAST of Tan0020374 vs. ExPASy TrEMBL
Match: A0A6J1DAF9 (KAT8 regulatory NSL complex subunit 2 OS=Momordica charantia OX=3673 GN=LOC111018675 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.4e-112 Identity = 201/241 (83.40%), Postives = 217/241 (90.04%), Query Frame = 0
BLAST of Tan0020374 vs. ExPASy TrEMBL
Match: A0A0A0K4I2 (KAT8 regulatory NSL complex subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_7G337070 PE=4 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 5.0e-110 Identity = 198/241 (82.16%), Postives = 218/241 (90.46%), Query Frame = 0
BLAST of Tan0020374 vs. ExPASy TrEMBL
Match: A0A1S3BH19 (KAT8 regulatory NSL complex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103489752 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.5e-110 Identity = 198/241 (82.16%), Postives = 218/241 (90.46%), Query Frame = 0
BLAST of Tan0020374 vs. TAIR 10
Match: AT2G31600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 182.6 bits (462), Expect = 3.8e-46 Identity = 103/229 (44.98%), Postives = 137/229 (59.83%), Query Frame = 0
BLAST of Tan0020374 vs. TAIR 10
Match: AT1G05860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31600.1); Has 101 Blast hits to 100 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). ) HSP 1 Score: 180.6 bits (457), Expect = 1.5e-45 Identity = 101/228 (44.30%), Postives = 135/228 (59.21%), Query Frame = 0
BLAST of Tan0020374 vs. TAIR 10
Match: AT3G53860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31600.1); Has 70 Blast hits to 70 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 172.9 bits (437), Expect = 3.0e-43 Identity = 95/211 (45.02%), Postives = 130/211 (61.61%), Query Frame = 0
BLAST of Tan0020374 vs. TAIR 10
Match: AT2G31600.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 110.2 bits (274), Expect = 2.4e-24 Identity = 65/149 (43.62%), Postives = 85/149 (57.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|