Tan0020278 (gene) Snake gourd v1

Overview


Name	Tan0020278
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	embryo-specific protein ATS3B-like
Location	LG01: 2928113 .. 2929909 (-)
RNA-Seq Expression	Tan0020278
Synteny	Tan0020278

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAAGCAAAATGTTATTTAAACCTTGAAATAAGTAGCTCGCGTACGATTCACCTGTCTCTGTATTCTTCCGTATTCTTCTTCTTCTTCAAAAGCTCCTCAACGCGAAAGCCAAAGACAGAAAAAAAAAAAAATGAAGAGAGTACTCTGTTTTCTGCTCAACACGGCCCTTCTTTTCGCTCTCTTAGAAGCCACCCAATTGCTGCCCCAACCCGTTGAATCCTTCAATCTAACCTATATTCAGGTATCGCCGTTCATTTCGGTTATTTCCATTTCCATATCCATTTCTGCTGATTTTCAATCTTTTTATACCTGTATCTGAGAACGATTCGTGTTTTTCTTTTGCCCTGTCGTTTGGGATTTTCTGATGTATAGCAAGTCGGGAGTTGTTCTTATTCAGTTGTTATATCGACGAGCTGTTCGTCGCCTACATACACAAGGGATCAGATCAGTCTTTCTTTCGGCGATGCTTATGGAAACCAGGTTTCCTTCGTTTATATGTTGATTTTCCCATTGATTTTCTCGGAATAGAAAGCCCCTGGTTTCTTTTTCATGATCCAATCAATTTCAGATATTCGAAATAGTTAATGAAACAAATCATCGTTGAGTTTTGCATCTGAATTTCGGAAAGTTATTTGTCATGTGATCTTGTATATAAACGCATATTAATATCTTTAGGTTAAAGTAATTCATTGATATGGCATATTATCCTTGATCTTTTGGATACAAAATGAATTAGAAATCGAATCGGGTTTCTATTTCTCGATTGTGATGGGATGAGCCTGTTGACTTATATGTGTCATAATTTCAAATCAGCTTTGTATCTAGTCATATATTAATTTCTTTCAAAAATCCATATGAGACCAAGTTCACAATGTTAAAATACTGTTCATTCTAGGAATTTGAAAGAACACACTGTTATAATTCAAAAACAATACAAGTTATCTTTACTTTCAGATAAGTTATGTTACATTTAATCATTTAATAAGCCTGTTTTGTATAATGAGTGATGAGATTTGACTTGTATACCTACCAGATTTATGTGCCAAGACTTGATGATCCATCCAGAAGGATATTTGAAAGATGTTCTTCTGATTCATTTGGCATAAATGGACCTTGTGCTTACCAAATATGCTATGTCTATCTTTATCGCTCTGGACCGGATGCCTGGATCCCAACAACAGTGAAAATCTCTGGTTATAATTCTAAACCCATCACGTTTAACTACAACACTGCGATACCGAATGACGTATGGTTCGGGTTTAACTTGTGTGGACATGCTTCGTTTTCAAACCGTATTTCAAGTTGCCCATGGTTCTTATACGCCATTGCAGTGTCTATTCTTGTCCTCCTATTGTAATTTTATGTTATGTCCAAGATGCTATTCATGTTCTATTCTTAATTAGAATGCATTTTGATGTAGCACTTTTAGTATAGAGAACATGGATAACTTACTAGAAAGCAAGCATCGATCAGAAGTGTACTTCTGTAGATTTAGTGATATTATACACAGGCAGAGGCAGTTCTTGGTGATTTTGAATCTTGACTTGGGATAGGCATTTTGAGTTCTTATTATGGAACTGGGAAATAGAGAAATTTTCGGGTTTTGTTTCTAGGTATGTTGGTCTTTGATTCATGTCACTTTATCCTATAGAACTTTATTATATCAATGGATCATGGGCCAAGTCTCTAATGTGTTGGAGATTGGGGAATGAGTTTGTTCTTCAACTGGTTGATTGAAACTTTAGGTGAATAAATATCCTTAATTACATCACTGTTGTTTAGAGTGAACTCAC

mRNA sequence

ATTTTAAGCAAAATGTTATTTAAACCTTGAAATAAGTAGCTCGCGTACGATTCACCTGTCTCTGTATTCTTCCGTATTCTTCTTCTTCTTCAAAAGCTCCTCAACGCGAAAGCCAAAGACAGAAAAAAAAAAAAATGAAGAGAGTACTCTGTTTTCTGCTCAACACGGCCCTTCTTTTCGCTCTCTTAGAAGCCACCCAATTGCTGCCCCAACCCGTTGAATCCTTCAATCTAACCTATATTCAGCAAGTCGGGAGTTGTTCTTATTCAGTTGTTATATCGACGAGCTGTTCGTCGCCTACATACACAAGGGATCAGATCAGTCTTTCTTTCGGCGATGCTTATGGAAACCAGATTTATGTGCCAAGACTTGATGATCCATCCAGAAGGATATTTGAAAGATGTTCTTCTGATTCATTTGGCATAAATGGACCTTGTGCTTACCAAATATGCTATGTCTATCTTTATCGCTCTGGACCGGATGCCTGGATCCCAACAACAGTGAAAATCTCTGGTTATAATTCTAAACCCATCACGTTTAACTACAACACTGCGATACCGAATGACGTATGGTTCGGGTTTAACTTGTGTGGACATGCTTCGTTTTCAAACCGTATTTCAAGTTGCCCATGGTTCTTATACGCCATTGCAGTGTCTATTCTTGTCCTCCTATTGTAATTTTATGTTATGTCCAAGATGCTATTCATGTTCTATTCTTAATTAGAATGCATTTTGATGTAGCACTTTTAGTATAGAGAACATGGATAACTTACTAGAAAGCAAGCATCGATCAGAAGTGTACTTCTGTAGATTTAGTGATATTATACACAGGCAGAGGCAGTTCTTGGTGATTTTGAATCTTGACTTGGGATAGGCATTTTGAGTTCTTATTATGGAACTGGGAAATAGAGAAATTTTCGGGTTTTGTTTCTAGGTATGTTGGTCTTTGATTCATGTCACTTTATCCTATAGAACTTTATTATATCAATGGATCATGGGCCAAGTCTCTAATGTGTTGGAGATTGGGGAATGAGTTTGTTCTTCAACTGGTTGATTGAAACTTTAGGTGAATAAATATCCTTAATTACATCACTGTTGTTTAGAGTGAACTCAC

Coding sequence (CDS)

ATGAAGAGAGTACTCTGTTTTCTGCTCAACACGGCCCTTCTTTTCGCTCTCTTAGAAGCCACCCAATTGCTGCCCCAACCCGTTGAATCCTTCAATCTAACCTATATTCAGCAAGTCGGGAGTTGTTCTTATTCAGTTGTTATATCGACGAGCTGTTCGTCGCCTACATACACAAGGGATCAGATCAGTCTTTCTTTCGGCGATGCTTATGGAAACCAGATTTATGTGCCAAGACTTGATGATCCATCCAGAAGGATATTTGAAAGATGTTCTTCTGATTCATTTGGCATAAATGGACCTTGTGCTTACCAAATATGCTATGTCTATCTTTATCGCTCTGGACCGGATGCCTGGATCCCAACAACAGTGAAAATCTCTGGTTATAATTCTAAACCCATCACGTTTAACTACAACACTGCGATACCGAATGACGTATGGTTCGGGTTTAACTTGTGTGGACATGCTTCGTTTTCAAACCGTATTTCAAGTTGCCCATGGTTCTTATACGCCATTGCAGTGTCTATTCTTGTCCTCCTATTGTAA

Protein sequence

MKRVLCFLLNTALLFALLEATQLLPQPVESFNLTYIQQVGSCSYSVVISTSCSSPTYTRDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAWIPTTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGHASFSNRISSCPWFLYAIAVSILVLLL

Homology

[Close]

BLAST of Tan0020278 vs. ExPASy Swiss-Prot
Match: Q6NPM5 (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.4e-52
Identity = 92/136 (67.65%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 25  PQPVESFNLTYIQQVG-SCSYSVVISTSCSSPTYTRDQISLSFGDAYGNQIYVPRLDDPS 84
           P   ESFN++ IQ++G +C+Y+V+ISTSCSS  YTRDQIS++FGD YGNQIY PRLDDPS
Sbjct: 30  PHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPS 89

Query: 85  RRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAWIPTTVKISGYNSKPITFNYNTAIPN 144
            + FE+CSSD+F INGPC YQICYVYLYRSGPD WIP TVKI  + SK +TF YNT +P 
Sbjct: 90  TKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPE 149

Query: 145 DVWFGFNLCGHASFSN 160
            VW+GFN C  AS SN
Sbjct: 150 SVWYGFNYCNSASDSN 165

[Close]

BLAST of Tan0020278 vs. ExPASy Swiss-Prot
Match: Q681K2 (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-40
Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 0


Query: 25  PQPVESF-NLTYIQQVGSCSYSVVISTSCSSPTYTRDQISLSFGDAYGNQIYVPRLDDPS 84
           P P++SF     ++   +CSY+V+I TSCSS +YTRD+IS+SFGD YGN++YV RLDDPS
Sbjct: 30  PLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDPS 89

Query: 85  RRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAWIPTTVKISGYNSKPITFNYNTAIPN 144
            R FE+CSSD++ I+GPC   +CY+YL R G D W P  VKI G + + +TF YN  +PN
Sbjct: 90  SRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPN 149

Query: 145 DVWFGFNLC---GHASFSNRISS 164
            VW+GFN+C   G+   S  IS+
Sbjct: 150 SVWYGFNVCNGIGNTKSSQPIST 172

[Close]

BLAST of Tan0020278 vs. ExPASy Swiss-Prot
Match: Q9LYP6 (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.7e-24
Identity = 54/128 (42.19%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 30  SFNLTYIQ-QVGSCSYSVVISTSCSSPTYTRDQISLSFGDAYGNQIYVPRLDDPSRRI-- 89
           +F+L+ IQ Q G+C Y+VV+ TSC SP  TRDQIS+ FGDA GN++Y P+L    R    
Sbjct: 21  AFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGG 80

Query: 90  FERCSSDSFGINGPCAYQ-ICYVYLYRSGPDAWIPTTVKISGYNSKPITFNYNTAIPN-D 149
             +CS+++F + G C    IC +Y+ R+GPD W+P +++I    SK + F+++ ++P  +
Sbjct: 81  LGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLN 140

Query: 150 VWFGFNLC 153
            W+G N C
Sbjct: 141 TWYGHNNC 148

[Close]

BLAST of Tan0020278 vs. NCBI nr
Match: XP_022923164.1 (embryo-specific protein ATS3B-like [Cucurbita moschata])

HSP 1 Score: 325.1 bits (832), Expect = 3.8e-85
Identity = 155/180 (86.11%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MKRVLCFLLNTALLFALLEATQLLPQPVESFNLTYIQQVGSCSYSVVISTSCSSPTYTRD 60
           MKRVLCFLL +ALL ALLEAT+LLP+  ESFNLTYIQQ+GSCSYSVVISTSCSSPTYTRD
Sbjct: 1   MKRVLCFLLTSALLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRD 60

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAWIP 120
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCSSD+F ++GPCAYQICYVYLYR+GPDAWIP
Sbjct: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQICYVYLYRTGPDAWIP 120

Query: 121 TTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGHASFSNRISSCPWFLYAIAVSILVLLL 180
           TTVKISG NS+P+TFNYNTAIPNDVWFGFNLCGHAS SNRISSC WFLY   VSIL+L L
Sbjct: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLYVSFVSILLLFL 180

[Close]

BLAST of Tan0020278 vs. NCBI nr
Match: XP_022984446.1 (embryo-specific protein ATS3B-like [Cucurbita maxima])

HSP 1 Score: 323.9 bits (829), Expect = 8.5e-85
Identity = 154/180 (85.56%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MKRVLCFLLNTALLFALLEATQLLPQPVESFNLTYIQQVGSCSYSVVISTSCSSPTYTRD 60
           MKRVLCFLL +A L ALLEAT+LLP+  ESFNLTYIQQ+GSCSYSVVISTSCSSPTYTRD
Sbjct: 1   MKRVLCFLLTSAFLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRD 60

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAWIP 120
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCSSD+F ++GPCAYQ+CYVYLYRSGPDAWIP
Sbjct: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIP 120

Query: 121 TTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGHASFSNRISSCPWFLYAIAVSILVLLL 180
           TTVKISG NS+P+TFNYNTAIPNDVWFGFNLCGHAS SNRISSC WFLY   VSIL+L L
Sbjct: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLYVSFVSILLLFL 180

[Close]

BLAST of Tan0020278 vs. NCBI nr
Match: XP_038877434.1 (embryo-specific protein ATS3B-like [Benincasa hispida])

HSP 1 Score: 323.9 bits (829), Expect = 8.5e-85
Identity = 158/180 (87.78%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MKRVLCFLLNTALLFALLEATQLLPQPVESFNLTYIQQVGSCSYSVVISTSCSSPTYTRD 60
           MK VLCFLL +A+LFA LEAT+LLPQ  ESFNLTYIQQ+GSCSYSVVISTSCSSPT+TRD
Sbjct: 1   MKGVLCFLLTSAILFAPLEATELLPQTAESFNLTYIQQLGSCSYSVVISTSCSSPTFTRD 60

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAWIP 120
           QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSD+FGINGPCAYQICYVYLYRSGPDAWIP
Sbjct: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDTFGINGPCAYQICYVYLYRSGPDAWIP 120

Query: 121 TTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGHASFSNRISSCPWFLYAIAVSILVLLL 180
           TTVKISG NS+P+TFNYNTAIPNDVWFGFNLCGH S SNR SSC  FLY I VSIL+LLL
Sbjct: 121 TTVKISGGNSRPVTFNYNTAIPNDVWFGFNLCGHPSSSNRCSSCVRFLYVILVSILLLLL 180

[Close]

BLAST of Tan0020278 vs. NCBI nr
Match: XP_023552620.1 (embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 5.5e-84
Identity = 153/180 (85.00%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MKRVLCFLLNTALLFALLEATQLLPQPVESFNLTYIQQVGSCSYSVVISTSCSSPTYTRD 60
           MKRVLCFLL +A L ALLEAT+LLP+  ESFNLTYIQQ+ SCSYSVVISTSCSSPTYTRD
Sbjct: 1   MKRVLCFLLTSAFLLALLEATELLPESAESFNLTYIQQLASCSYSVVISTSCSSPTYTRD 60

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAWIP 120
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCSSD+F ++GPCAYQICYVYLYRSGPDAWIP
Sbjct: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQICYVYLYRSGPDAWIP 120

Query: 121 TTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGHASFSNRISSCPWFLYAIAVSILVLLL 180
           TTVKISG NS+P+TFNYNTAIPNDVWFGFNLCGH+S SNRISSC WFLY   VSIL+L L
Sbjct: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHSSSSNRISSCIWFLYVSFVSILLLFL 180

[Close]

BLAST of Tan0020278 vs. NCBI nr
Match: XP_022140983.1 (embryo-specific protein ATS3B-like isoform X2 [Momordica charantia])

HSP 1 Score: 319.3 bits (817), Expect = 2.1e-83
Identity = 155/182 (85.16%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 1   MKRVLCFLLNTALLFALLEATQLLPQPVES--FNLTYIQQVGSCSYSVVISTSCSSPTYT 60
           MKR+LCFLL++  LFAL EATQLLPQP ES  FNLTYIQQ GSCSYSVVISTSCSSP+YT
Sbjct: 1   MKRLLCFLLSSVFLFALSEATQLLPQPAESFNFNLTYIQQAGSCSYSVVISTSCSSPSYT 60

Query: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAW 120
           RD ISLSFGDAYGNQIYVPR+DDPSRR FERCS+D+F INGPCAYQICYVYLYRSGPDAW
Sbjct: 61  RDHISLSFGDAYGNQIYVPRIDDPSRRTFERCSTDTFHINGPCAYQICYVYLYRSGPDAW 120

Query: 121 IPTTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGHASFSNRISSCPWFLYAIAVSILVL 180
           IPTTVKISG NS+PITFNYNTAIPNDVWFGFNLCGHAS SNR+SSC WF+Y I V IL L
Sbjct: 121 IPTTVKISGDNSRPITFNYNTAIPNDVWFGFNLCGHASSSNRLSSCMWFIYVIGVWILAL 180

[Close]

BLAST of Tan0020278 vs. ExPASy TrEMBL
Match: A0A6J1E5K7 (embryo-specific protein ATS3B-like OS=Cucurbita moschata OX=3662 GN=LOC111430911 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.9e-85
Identity = 155/180 (86.11%), Postives = 168/180 (93.33%), Query Frame = 0


Query: 1   MKRVLCFLLNTALLFALLEATQLLPQPVESFNLTYIQQVGSCSYSVVISTSCSSPTYTRD 60
           MKRVLCFLL +ALL ALLEAT+LLP+  ESFNLTYIQQ+GSCSYSVVISTSCSSPTYTRD
Sbjct: 1   MKRVLCFLLTSALLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRD 60

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAWIP 120
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCSSD+F ++GPCAYQICYVYLYR+GPDAWIP
Sbjct: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQICYVYLYRTGPDAWIP 120

Query: 121 TTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGHASFSNRISSCPWFLYAIAVSILVLLL 180
           TTVKISG NS+P+TFNYNTAIPNDVWFGFNLCGHAS SNRISSC WFLY   VSIL+L L
Sbjct: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLYVSFVSILLLFL 180

[Close]

BLAST of Tan0020278 vs. ExPASy TrEMBL
Match: A0A6J1J591 (embryo-specific protein ATS3B-like OS=Cucurbita maxima OX=3661 GN=LOC111482748 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 4.1e-85
Identity = 154/180 (85.56%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   MKRVLCFLLNTALLFALLEATQLLPQPVESFNLTYIQQVGSCSYSVVISTSCSSPTYTRD 60
           MKRVLCFLL +A L ALLEAT+LLP+  ESFNLTYIQQ+GSCSYSVVISTSCSSPTYTRD
Sbjct: 1   MKRVLCFLLTSAFLLALLEATELLPESAESFNLTYIQQLGSCSYSVVISTSCSSPTYTRD 60

Query: 61  QISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAWIP 120
           QIS+SFGDAYGNQIYVPR+DDPSRRIFERCSSD+F ++GPCAYQ+CYVYLYRSGPDAWIP
Sbjct: 61  QISVSFGDAYGNQIYVPRIDDPSRRIFERCSSDTFSVSGPCAYQLCYVYLYRSGPDAWIP 120

Query: 121 TTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGHASFSNRISSCPWFLYAIAVSILVLLL 180
           TTVKISG NS+P+TFNYNTAIPNDVWFGFNLCGHAS SNRISSC WFLY   VSIL+L L
Sbjct: 121 TTVKISGPNSRPVTFNYNTAIPNDVWFGFNLCGHASSSNRISSCIWFLYVSFVSILLLFL 180

[Close]

BLAST of Tan0020278 vs. ExPASy TrEMBL
Match: A0A6J1CHB0 (embryo-specific protein ATS3B-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011502 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.0e-83
Identity = 155/182 (85.16%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 1   MKRVLCFLLNTALLFALLEATQLLPQPVES--FNLTYIQQVGSCSYSVVISTSCSSPTYT 60
           MKR+LCFLL++  LFAL EATQLLPQP ES  FNLTYIQQ GSCSYSVVISTSCSSP+YT
Sbjct: 1   MKRLLCFLLSSVFLFALSEATQLLPQPAESFNFNLTYIQQAGSCSYSVVISTSCSSPSYT 60

Query: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAW 120
           RD ISLSFGDAYGNQIYVPR+DDPSRR FERCS+D+F INGPCAYQICYVYLYRSGPDAW
Sbjct: 61  RDHISLSFGDAYGNQIYVPRIDDPSRRTFERCSTDTFHINGPCAYQICYVYLYRSGPDAW 120

Query: 121 IPTTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGHASFSNRISSCPWFLYAIAVSILVL 180
           IPTTVKISG NS+PITFNYNTAIPNDVWFGFNLCGHAS SNR+SSC WF+Y I V IL L
Sbjct: 121 IPTTVKISGDNSRPITFNYNTAIPNDVWFGFNLCGHASSSNRLSSCMWFIYVIGVWILAL 180

[Close]

BLAST of Tan0020278 vs. ExPASy TrEMBL
Match: A0A6J1CJ97 (embryo-specific protein ATS3B-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011502 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.0e-83
Identity = 155/182 (85.16%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 1   MKRVLCFLLNTALLFALLEATQLLPQPVES--FNLTYIQQVGSCSYSVVISTSCSSPTYT 60
           MKR+LCFLL++  LFAL EATQLLPQP ES  FNLTYIQQ GSCSYSVVISTSCSSP+YT
Sbjct: 1   MKRLLCFLLSSVFLFALSEATQLLPQPAESFNFNLTYIQQAGSCSYSVVISTSCSSPSYT 60

Query: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAW 120
           RD ISLSFGDAYGNQIYVPR+DDPSRR FERCS+D+F INGPCAYQICYVYLYRSGPDAW
Sbjct: 61  RDHISLSFGDAYGNQIYVPRIDDPSRRTFERCSTDTFHINGPCAYQICYVYLYRSGPDAW 120

Query: 121 IPTTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGHASFSNRISSCPWFLYAIAVSILVL 180
           IPTTVKISG NS+PITFNYNTAIPNDVWFGFNLCGHAS SNR+SSC WF+Y I V IL L
Sbjct: 121 IPTTVKISGDNSRPITFNYNTAIPNDVWFGFNLCGHASSSNRLSSCMWFIYVIGVWILAL 180

[Close]

BLAST of Tan0020278 vs. ExPASy TrEMBL
Match: A0A6J1CIK5 (embryo-specific protein ATS3B-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011502 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.7e-83
Identity = 154/181 (85.08%), Postives = 164/181 (90.61%), Query Frame = 0


Query: 1   MKRVLCFLLNTALLFALLEATQLLPQPVES--FNLTYIQQVGSCSYSVVISTSCSSPTYT 60
           MKR+LCFLL++  LFAL EATQLLPQP ES  FNLTYIQQ GSCSYSVVISTSCSSP+YT
Sbjct: 1   MKRLLCFLLSSVFLFALSEATQLLPQPAESFNFNLTYIQQAGSCSYSVVISTSCSSPSYT 60

Query: 61  RDQISLSFGDAYGNQIYVPRLDDPSRRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAW 120
           RD ISLSFGDAYGNQIYVPR+DDPSRR FERCS+D+F INGPCAYQICYVYLYRSGPDAW
Sbjct: 61  RDHISLSFGDAYGNQIYVPRIDDPSRRTFERCSTDTFHINGPCAYQICYVYLYRSGPDAW 120

Query: 121 IPTTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGHASFSNRISSCPWFLYAIAVSILVL 180
           IPTTVKISG NS+PITFNYNTAIPNDVWFGFNLCGHAS SNR+SSC WF+Y I V IL L
Sbjct: 121 IPTTVKISGDNSRPITFNYNTAIPNDVWFGFNLCGHASSSNRLSSCMWFIYVIGVWILAL 180

[Close]

BLAST of Tan0020278 vs. TAIR 10
Match: AT5G62200.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 206.1 bits (523), Expect = 2.4e-53
Identity = 92/136 (67.65%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 25  PQPVESFNLTYIQQVG-SCSYSVVISTSCSSPTYTRDQISLSFGDAYGNQIYVPRLDDPS 84
           P   ESFN++ IQ++G +C+Y+V+ISTSCSS  YTRDQIS++FGD YGNQIY PRLDDPS
Sbjct: 30  PHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDPS 89

Query: 85  RRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAWIPTTVKISGYNSKPITFNYNTAIPN 144
            + FE+CSSD+F INGPC YQICYVYLYRSGPD WIP TVKI  + SK +TF YNT +P 
Sbjct: 90  TKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVPE 149

Query: 145 DVWFGFNLCGHASFSN 160
            VW+GFN C  AS SN
Sbjct: 150 SVWYGFNYCNSASDSN 165

[Close]

BLAST of Tan0020278 vs. TAIR 10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 167.5 bits (423), Expect = 9.5e-42
Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = 0


Query: 25  PQPVESF-NLTYIQQVGSCSYSVVISTSCSSPTYTRDQISLSFGDAYGNQIYVPRLDDPS 84
           P P++SF     ++   +CSY+V+I TSCSS +YTRD+IS+SFGD YGN++YV RLDDPS
Sbjct: 30  PLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDPS 89

Query: 85  RRIFERCSSDSFGINGPCAYQICYVYLYRSGPDAWIPTTVKISGYNSKPITFNYNTAIPN 144
            R FE+CSSD++ I+GPC   +CY+YL R G D W P  VKI G + + +TF YN  +PN
Sbjct: 90  SRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLPN 149

Query: 145 DVWFGFNLC---GHASFSNRISS 164
            VW+GFN+C   G+   S  IS+
Sbjct: 150 SVWYGFNVCNGIGNTKSSQPIST 172

[Close]

BLAST of Tan0020278 vs. TAIR 10
Match: AT5G62210.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-30
Identity = 55/116 (47.41%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 41  SCSYSVVISTSCSSPTYTRDQISLSFGDAYGNQIYVPRLDDP--SRRIFERCSSDSFGIN 100
           SC Y+V+++TSC SP ++RDQ++++ GDA  NQ+  PRLD P      FE+CSSD+F + 
Sbjct: 39  SCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVK 98

Query: 101 GPCAYQICYVYLYRSGPDAWIPTTVKISGYNSKPITFNYNTAIPNDVWFGFNLCGH 155
           G C   IC VY+YRSG D WIP TV+I    SK + F++N  +P ++W+G N C +
Sbjct: 99  GKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCNN 154

[Close]

BLAST of Tan0020278 vs. TAIR 10
Match: AT5G07190.1 (seed gene 3 )

HSP 1 Score: 111.7 bits (278), Expect = 6.2e-25
Identity = 54/128 (42.19%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 30  SFNLTYIQ-QVGSCSYSVVISTSCSSPTYTRDQISLSFGDAYGNQIYVPRLDDPSRRI-- 89
           +F+L+ IQ Q G+C Y+VV+ TSC SP  TRDQIS+ FGDA GN++Y P+L    R    
Sbjct: 21  AFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGG 80

Query: 90  FERCSSDSFGINGPCAYQ-ICYVYLYRSGPDAWIPTTVKISGYNSKPITFNYNTAIPN-D 149
             +CS+++F + G C    IC +Y+ R+GPD W+P +++I    SK + F+++ ++P  +
Sbjct: 81  LGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLN 140

Query: 150 VWFGFNLC 153
            W+G N C
Sbjct: 141 TWYGHNNC 148

[Close]

BLAST of Tan0020278 vs. TAIR 10
Match: AT5G07190.2 (seed gene 3 )

HSP 1 Score: 108.6 bits (270), Expect = 5.3e-24
Identity = 50/119 (42.02%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 38  QVGSCSYSVVISTSCSSPTYTRDQISLSFGDAYGNQIYVPRLDDPSRRI--FERCSSDSF 97
           Q G+C Y+VV+ TSC SP  TRDQIS+ FGDA GN++Y P+L    R      +CS+++F
Sbjct: 2   QQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTF 61

Query: 98  GINGPCAYQ-ICYVYLYRSGPDAWIPTTVKISGYNSKPITFNYNTAIPN-DVWFGFNLC 153
            + G C    IC +Y+ R+GPD W+P +++I    SK + F+++ ++P  + W+G N C
Sbjct: 62  QVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNC 120

The following BLAST results are available for this feature:

BLAST of Tan0020278 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPM5	3.4e-52	67.65	Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1	[more]
Q681K2	1.3e-40	52.45	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]
Q9LYP6	8.7e-24	42.19	Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1	[more]

BLAST of Tan0020278 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923164.1	3.8e-85	86.11	embryo-specific protein ATS3B-like [Cucurbita moschata]	[more]
XP_022984446.1	8.5e-85	85.56	embryo-specific protein ATS3B-like [Cucurbita maxima]	[more]
XP_038877434.1	8.5e-85	87.78	embryo-specific protein ATS3B-like [Benincasa hispida]	[more]
XP_023552620.1	5.5e-84	85.00	embryo-specific protein ATS3B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022140983.1	2.1e-83	85.16	embryo-specific protein ATS3B-like isoform X2 [Momordica charantia]	[more]

BLAST of Tan0020278 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5K7	1.9e-85	86.11	embryo-specific protein ATS3B-like OS=Cucurbita moschata OX=3662 GN=LOC111430911...	[more]
A0A6J1J591	4.1e-85	85.56	embryo-specific protein ATS3B-like OS=Cucurbita maxima OX=3661 GN=LOC111482748 P...	[more]
A0A6J1CHB0	1.0e-83	85.16	embryo-specific protein ATS3B-like isoform X3 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1CJ97	1.0e-83	85.16	embryo-specific protein ATS3B-like isoform X2 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1CIK5	1.7e-83	85.08	embryo-specific protein ATS3B-like isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of Tan0020278 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62200.1	2.4e-53	67.65	Embryo-specific protein 3, (ATS3)	[more]
AT2G41475.1	9.5e-42	52.45	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	4.9e-30	47.41	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	6.2e-25	42.19	seed gene 3	[more]
AT5G07190.2	5.3e-24	42.02	seed gene 3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 37..152 e-value: 1.1E-48 score: 164.3
None	No IPR available	PANTHER	PTHR31718:SF32	EMBRYO-SPECIFIC PROTEIN ATS3B	coord: 5..178
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 5..178
None	No IPR available	CDD	cd00113	PLAT	coord: 42..152 e-value: 2.2295E-26 score: 95.0984
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 38..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0020278.1	Tan0020278.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity