Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGTGCTCAGGATGTGGTTAAAATTCAAGAATATAAAGATGTTGCTTGGTTTTTAACTTTAGTGAAAGATCAAAATACAAGATATCTTTTAGTTACTCATATCAATGATGCTTGTTTTGATGGCTGCTCCTGTGATCTTAGTGATGGAAGTGACAAGTTGTTATCAATTGCTACTTTGTCGTCTTCTTCTAGGATTGATGGTGATTTCCACGTTATTACATATATTTATAGAGATGTTGATGTGGAGGAAAATGATGTTTTTGCAAGTAAGGAAATTGTGTCAAAGTTTTTTTCATTCCTTGTTGTGAAGAAGAATTTTGAGTTTAGGACATTAAAAACAAATTCAAAGTCACTTGAATTTCAATGTGCCCAAGAGGGTTGCCAATGGTATGTTCGAGCATCGCGTTATAAGAATAGTAACTTGTGGATGCTTAGGAATCATTCTGAATGA
mRNA sequence
ATGAATGGTGCTCAGGATGTGGTTAAAATTCAAGAATATAAAGATGTTGCTTGGTTTTTAACTTTAGTGAAAGATCAAAATACAAGATATCTTTTAGTTACTCATATCAATGATGCTTGTTTTGATGGCTGCTCCTGTGATCTTAGTGATGGAAGTGACAAGTTGTTATCAATTGCTACTTTGTCGTCTTCTTCTAGGATTGATGGTGATTTCCACGTTATTACATATATTTATAGAGATGTTGATGTGGAGGAAAATGATGTTTTTGCAAGTAAGGAAATTGTGTCAAAGTTTTTTTCATTCCTTGTTGTGAAGAAGAATTTTGAGTTTAGGACATTAAAAACAAATTCAAAGTCACTTGAATTTCAATGTGCCCAAGAGGGTTGCCAATGGTATGTTCGAGCATCGCGTTATAAGAATAGTAACTTGTGGATGCTTAGGAATCATTCTGAATGA
Coding sequence (CDS)
ATGAATGGTGCTCAGGATGTGGTTAAAATTCAAGAATATAAAGATGTTGCTTGGTTTTTAACTTTAGTGAAAGATCAAAATACAAGATATCTTTTAGTTACTCATATCAATGATGCTTGTTTTGATGGCTGCTCCTGTGATCTTAGTGATGGAAGTGACAAGTTGTTATCAATTGCTACTTTGTCGTCTTCTTCTAGGATTGATGGTGATTTCCACGTTATTACATATATTTATAGAGATGTTGATGTGGAGGAAAATGATGTTTTTGCAAGTAAGGAAATTGTGTCAAAGTTTTTTTCATTCCTTGTTGTGAAGAAGAATTTTGAGTTTAGGACATTAAAAACAAATTCAAAGTCACTTGAATTTCAATGTGCCCAAGAGGGTTGCCAATGGTATGTTCGAGCATCGCGTTATAAGAATAGTAACTTGTGGATGCTTAGGAATCATTCTGAATGA
Protein sequence
MNGAQDVVKIQEYKDVAWFLTLVKDQNTRYLLVTHINDACFDGCSCDLSDGSDKLLSIATLSSSSRIDGDFHVITYIYRDVDVEENDVFASKEIVSKFFSFLVVKKNFEFRTLKTNSKSLEFQCAQEGCQWYVRASRYKNSNLWMLRNHSE
Homology
BLAST of Tan0020179 vs. NCBI nr
Match:
XP_038907134.1 (uncharacterized protein LOC120092945 [Benincasa hispida])
HSP 1 Score: 170.6 bits (431), Expect = 1.0e-38
Identity = 85/147 (57.82%), Postives = 110/147 (74.83%), Query Frame = 0
Query: 1 MNGAQDVVKIQEYKDVAWFLTLVKDQNTRYLLVTHINDACFDGCSCDLSDGSDKLLSIAT 60
MN Q++V+I E KDVAWFLTLVK+Q+TR+ LV H+ C +G S +S ++ LSI
Sbjct: 64 MNKVQNIVEIHEDKDVAWFLTLVKEQSTRHPLVAHVTSMCLEGSSSVVSSEAENYLSIVP 123
Query: 61 LSSSSRIDGDFHVITYIYRDVDVEENDVFASKEIVSKFFSFLVVKKNFEFRTLKTNSKSL 120
S ID DF VI I+ D++E DVFASKEI+SK F ++ VKKNFEF+TL++NS+S+
Sbjct: 124 Y-SMPMIDDDFQVIMDIHIARDLKEKDVFASKEILSKCFYYIAVKKNFEFKTLRSNSRSI 183
Query: 121 EFQCAQEGCQWYVRASRYKNSNLWMLR 148
EF+C Q+GCQWYVRASRYK S+LWMLR
Sbjct: 184 EFRCVQDGCQWYVRASRYKASDLWMLR 209
BLAST of Tan0020179 vs. NCBI nr
Match:
KAA0065296.1 (protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa])
HSP 1 Score: 138.3 bits (347), Expect = 5.6e-29
Identity = 76/154 (49.35%), Postives = 102/154 (66.23%), Query Frame = 0
Query: 5 QDVVKIQEYKDVAWFLTLVKDQNTRYLLV----THINDACFDGCSCDLSDGSDKLLSIAT 64
Q VV+IQE KDV WFL+LVK Q TR+ LV H+ D + S + G D L S
Sbjct: 70 QTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSV-VDSGMDNLCS--- 129
Query: 65 LSSSSRIDGDFHVITYIY-----RDVDVEENDVFASKEIVSKFFSFLVVKKNFEFRTLKT 124
L SS ID DF ++T I+ D++END+FASKE++SK F ++ +K NFEF+T+++
Sbjct: 130 LLPSSSIDDDFQILTDIHVSSFSSTFDLKENDMFASKELLSKSFYYIAIKNNFEFKTVRS 189
Query: 125 NSKSLEFQCAQEGCQWYVRASRYKNSNLWMLRNH 150
NSKS+EF+C+Q+ C WYVRASRYK LW LR +
Sbjct: 190 NSKSIEFKCSQDNCPWYVRASRYKGGKLWRLRKY 219
BLAST of Tan0020179 vs. NCBI nr
Match:
KAA0062637.1 (uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa])
HSP 1 Score: 136.7 bits (343), Expect = 1.6e-28
Identity = 72/157 (45.86%), Postives = 97/157 (61.78%), Query Frame = 0
Query: 2 NGAQDVVKIQEYKDVAWFLTLVKDQNTRYLLVTHINDACFDGCSCDLSDGSDKLLSIATL 61
NG Q V+KI E KDV WFLTLVKDQ+T+Y LV H + D S+ +
Sbjct: 65 NGVQHVLKIVENKDVTWFLTLVKDQSTQYPLVAHSVNTVLDA-------------SVGSS 124
Query: 62 SSSSRIDGDFHVITYIYRDVDV---------EENDVFASKEIVSKFFSFLVVKKNFEFRT 121
SSS ++ D I+RDVD+ +E D+F SKEI+ K F F+ VK NFEF+T
Sbjct: 125 CSSSIVEVDLGDELVIFRDVDITNSKDGLTFKEKDLFCSKEILLKSFRFIAVKSNFEFKT 184
Query: 122 LKTNSKSLEFQCAQEGCQWYVRASRYKNSNLWMLRNH 150
L++NS+S+E +C ++GC W+VRASRYK S WM+R +
Sbjct: 185 LRSNSRSIELRCNEDGCLWFVRASRYKRSESWMIRKY 208
BLAST of Tan0020179 vs. NCBI nr
Match:
TYK23827.1 (MuDR family transposase [Cucumis melo var. makuwa])
HSP 1 Score: 136.7 bits (343), Expect = 1.6e-28
Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 0
Query: 5 QDVVKIQEYKDVAWFLTLVKDQNTRYLLVTH--INDACFD-GCSCDLSDGSDKLLSIATL 64
Q VV+IQE KDV WFL+LVK Q TR+ LV H ++ + D S + G D L S L
Sbjct: 70 QTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIVHVSNMDLEWSSVVDSGMDNLCS---L 129
Query: 65 SSSSRIDGDFHVITYIY-----RDVDVEENDVFASKEIVSKFFSFLVVKKNFEFRTLKTN 124
SSS ID DF ++T I+ D++E D+FASKE++SK F ++ +K NFEF+T+++N
Sbjct: 130 LSSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSN 189
Query: 125 SKSLEFQCAQEGCQWYVRASRYKNSNLWMLRNH 150
SKS+EF+C+Q+ C WYVRASRYK LW LR +
Sbjct: 190 SKSIEFKCSQDNCPWYVRASRYKGGELWRLRKY 219
BLAST of Tan0020179 vs. NCBI nr
Match:
TYJ96591.1 (uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa])
HSP 1 Score: 136.7 bits (343), Expect = 1.6e-28
Identity = 72/157 (45.86%), Postives = 97/157 (61.78%), Query Frame = 0
Query: 2 NGAQDVVKIQEYKDVAWFLTLVKDQNTRYLLVTHINDACFDGCSCDLSDGSDKLLSIATL 61
N Q V+KI E KDV WFLTLVKDQ+T+Y LV H + D S+ +
Sbjct: 65 NSVQHVLKIVENKDVTWFLTLVKDQSTQYPLVAHSVNTVLDA-------------SVGSS 124
Query: 62 SSSSRIDGDFHVITYIYRDVDV---------EENDVFASKEIVSKFFSFLVVKKNFEFRT 121
SSS ++ D I+RDVD+ +E D+F SKEI+ K F F+ VK NFEF+T
Sbjct: 125 CSSSIVEVDLGDELVIFRDVDITNSKDGLTFKEKDLFCSKEILLKSFRFIAVKSNFEFKT 184
Query: 122 LKTNSKSLEFQCAQEGCQWYVRASRYKNSNLWMLRNH 150
L++NS+S+E +C ++GC W+VRASRYK S LWM+R +
Sbjct: 185 LRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKY 208
BLAST of Tan0020179 vs. ExPASy TrEMBL
Match:
A0A5A7VG38 (Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00100 PE=4 SV=1)
HSP 1 Score: 138.3 bits (347), Expect = 2.7e-29
Identity = 76/154 (49.35%), Postives = 102/154 (66.23%), Query Frame = 0
Query: 5 QDVVKIQEYKDVAWFLTLVKDQNTRYLLV----THINDACFDGCSCDLSDGSDKLLSIAT 64
Q VV+IQE KDV WFL+LVK Q TR+ LV H+ D + S + G D L S
Sbjct: 70 QTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIAHVPDMDLEWSSV-VDSGMDNLCS--- 129
Query: 65 LSSSSRIDGDFHVITYIY-----RDVDVEENDVFASKEIVSKFFSFLVVKKNFEFRTLKT 124
L SS ID DF ++T I+ D++END+FASKE++SK F ++ +K NFEF+T+++
Sbjct: 130 LLPSSSIDDDFQILTDIHVSSFSSTFDLKENDMFASKELLSKSFYYIAIKNNFEFKTVRS 189
Query: 125 NSKSLEFQCAQEGCQWYVRASRYKNSNLWMLRNH 150
NSKS+EF+C+Q+ C WYVRASRYK LW LR +
Sbjct: 190 NSKSIEFKCSQDNCPWYVRASRYKGGKLWRLRKY 219
BLAST of Tan0020179 vs. ExPASy TrEMBL
Match:
A0A5D3DJR8 (MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold162G00300 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 7.9e-29
Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 0
Query: 5 QDVVKIQEYKDVAWFLTLVKDQNTRYLLVTH--INDACFD-GCSCDLSDGSDKLLSIATL 64
Q VV+IQE KDV WFL+LVK Q TR+ LV H ++ + D S + G D L S L
Sbjct: 70 QTVVQIQEDKDVTWFLSLVKGQITRHPLVAHAIVHVSNMDLEWSSVVDSGMDNLCS---L 129
Query: 65 SSSSRIDGDFHVITYIY-----RDVDVEENDVFASKEIVSKFFSFLVVKKNFEFRTLKTN 124
SSS ID DF ++T I+ D++E D+FASKE++SK F ++ +K NFEF+T+++N
Sbjct: 130 LSSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSN 189
Query: 125 SKSLEFQCAQEGCQWYVRASRYKNSNLWMLRNH 150
SKS+EF+C+Q+ C WYVRASRYK LW LR +
Sbjct: 190 SKSIEFKCSQDNCPWYVRASRYKGGELWRLRKY 219
BLAST of Tan0020179 vs. ExPASy TrEMBL
Match:
A0A5A7V6N4 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001490 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 7.9e-29
Identity = 72/157 (45.86%), Postives = 97/157 (61.78%), Query Frame = 0
Query: 2 NGAQDVVKIQEYKDVAWFLTLVKDQNTRYLLVTHINDACFDGCSCDLSDGSDKLLSIATL 61
NG Q V+KI E KDV WFLTLVKDQ+T+Y LV H + D S+ +
Sbjct: 65 NGVQHVLKIVENKDVTWFLTLVKDQSTQYPLVAHSVNTVLDA-------------SVGSS 124
Query: 62 SSSSRIDGDFHVITYIYRDVDV---------EENDVFASKEIVSKFFSFLVVKKNFEFRT 121
SSS ++ D I+RDVD+ +E D+F SKEI+ K F F+ VK NFEF+T
Sbjct: 125 CSSSIVEVDLGDELVIFRDVDITNSKDGLTFKEKDLFCSKEILLKSFRFIAVKSNFEFKT 184
Query: 122 LKTNSKSLEFQCAQEGCQWYVRASRYKNSNLWMLRNH 150
L++NS+S+E +C ++GC W+VRASRYK S WM+R +
Sbjct: 185 LRSNSRSIELRCNEDGCLWFVRASRYKRSESWMIRKY 208
BLAST of Tan0020179 vs. ExPASy TrEMBL
Match:
A0A5D3BD68 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1278G00090 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 7.9e-29
Identity = 72/157 (45.86%), Postives = 97/157 (61.78%), Query Frame = 0
Query: 2 NGAQDVVKIQEYKDVAWFLTLVKDQNTRYLLVTHINDACFDGCSCDLSDGSDKLLSIATL 61
N Q V+KI E KDV WFLTLVKDQ+T+Y LV H + D S+ +
Sbjct: 65 NSVQHVLKIVENKDVTWFLTLVKDQSTQYPLVAHSVNTVLDA-------------SVGSS 124
Query: 62 SSSSRIDGDFHVITYIYRDVDV---------EENDVFASKEIVSKFFSFLVVKKNFEFRT 121
SSS ++ D I+RDVD+ +E D+F SKEI+ K F F+ VK NFEF+T
Sbjct: 125 CSSSIVEVDLGDELVIFRDVDITNSKDGLTFKEKDLFCSKEILLKSFRFIAVKSNFEFKT 184
Query: 122 LKTNSKSLEFQCAQEGCQWYVRASRYKNSNLWMLRNH 150
L++NS+S+E +C ++GC W+VRASRYK S LWM+R +
Sbjct: 185 LRSNSRSIELRCNEDGCLWFVRASRYKRSELWMIRKY 208
BLAST of Tan0020179 vs. ExPASy TrEMBL
Match:
A0A5D3DWG1 (Mutator-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00290 PE=4 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 1.0e-28
Identity = 74/154 (48.05%), Postives = 103/154 (66.88%), Query Frame = 0
Query: 5 QDVVKIQEYKDVAWFLTLVKDQNTRYLLV----THINDACFDGCSCDLSDGSDKLLSIAT 64
Q+VV+IQE KDV WFL+LVK TR+ LV H+++ + S + G D L S
Sbjct: 70 QNVVQIQEDKDVTWFLSLVKGHITRHPLVAHAIAHVSNMDLEWSSV-VDSGMDNLCS--- 129
Query: 65 LSSSSRIDGDFHVITYIY-----RDVDVEENDVFASKEIVSKFFSFLVVKKNFEFRTLKT 124
L SS ID DF ++T I+ D++E D+FASKE++SK F ++ +K NFEF+T+++
Sbjct: 130 LLPSSSIDDDFQILTDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRS 189
Query: 125 NSKSLEFQCAQEGCQWYVRASRYKNSNLWMLRNH 150
NSKS+EF+C+Q+ C WYVRASRYK LW LRN+
Sbjct: 190 NSKSMEFKCSQDNCPWYVRASRYKGGELWRLRNY 219
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_038907134.1 | 1.0e-38 | 57.82 | uncharacterized protein LOC120092945 [Benincasa hispida] | [more] |
| KAA0065296.1 | 5.6e-29 | 49.35 | protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa] | [more] |
| KAA0062637.1 | 1.6e-28 | 45.86 | uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa] | [more] |
| TYK23827.1 | 1.6e-28 | 49.67 | MuDR family transposase [Cucumis melo var. makuwa] | [more] |
| TYJ96591.1 | 1.6e-28 | 45.86 | uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VG38 | 2.7e-29 | 49.35 | Protein FAR1-RELATED SEQUENCE 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
| A0A5D3DJR8 | 7.9e-29 | 49.67 | MuDR family transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7V6N4 | 7.9e-29 | 45.86 | SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
| A0A5D3BD68 | 7.9e-29 | 45.86 | SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
| A0A5D3DWG1 | 1.0e-28 | 48.05 | Mutator-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
