Tan0019910 (gene) Snake gourd v1

Overview


Name	Tan0019910
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	LOB domain-containing protein
Location	LG01: 39333484 .. 39335232 (-)
RNA-Seq Expression	Tan0019910
Synteny	Tan0019910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTCTCTCTCTTCTTTCTCTCTCTACTGAGTCTAAAATGGAGTGCAGTGAGGCAAAATCCAGCCCAACTTCAACCATCCTCCATTCTCAGTCGCCGTCCTCCTCCTCCTTCCCGCCGCCGCCGCCGCCACCAAGTGTTCAGGCCGGCGTGGTGGTCAGTCCGTGTGCTGCGTGCAAGATTTTGCGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTACTTTCCTCCGTCGGATCCTCTCAAGTTCACCATTGCTCACCGAGTCTTCGGCGCCAGCAACATCATCAAACTGCTTCAGGTACCTCCTCAATCCCTAATTTCCTCTTCTCTCGAGACTTTTCGTGTCATCTTTCCTTTTCTTAGGTTTTGAAATCGTGAATATATTCCGATGCGTAAATTGAAAATTAATCTTGGAATCGTAACGAAAAATCATCGAATTAGTAGGAAAATACTGTTTACATGAACAGTTTTGCCAATTGAACTCATCTCTGGCTAATGCGTTAGGAGGACAAAAACACATAATGGAGTTAGTACTGAAATTGATCTAACCTTTTCATTTTTGAGTAATCGAGCGAATCGCAATTGAGTAGAACTGTGTGATTTTGGAAGCAGAACAGTGCCGTGAACACGGATGGGGCTCACACCCACACACACACACAACTTGTCCAATCTCAATAATGCCCTTATTTTGCCTAGAAATCTGAAAATTACGCAATCCTAATCTGTTTGTTTGTTTTCGCTTAATGGCCATGTGGTGCAATGATAATCAAACATAATGCAAACTGGAAGAATCAAACAAAGTAGGCCATGTGTTTTCTTTTTGTCCTCACAGAACAGCCAATCATATTTCAAATTCAATCTGTTCTTATACAATTCAAAACCACCACAAACCAAACACTTCTGATATCATCACTTTATTAAATTCTTCATTCAGGATCTTCCTGAATCACAAAGGGCTGATGCAGTGAGTAGTTTGGTGTATGAAGCAAGTGCAAGAATCAGAGATCCAGTTTACGGGTGTGCAGGGGCCATTTGCCAGCTCCAAAAACACATAAACGAACTGCAAGCAGAGCTAGCCAAGACACAGGCTGAGCTTGTCAACATGCAGTGTCACCAAGCCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCTCAAACCCCGCCACCGGCCCCGCTGCCGGACCACCGCTCACTTGATAACAATTTCAACATTGCCACTCCTCAGAGCTACCAAAACTACTCATCTTTGTTTGAGGATAGCAATTTTTGGGAGGCTCTTTGGACATGAGAAAGAAAAAACTTGAACATGGCTGAAAAGGGGGGAAAGATTTCTCAGATAAAAAGTTATGAGAAGTCAAAGTTGATTGGTTTTAAGTAGAATATATGAAAGTTTAGTAGTTGAATATTGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCGTTTGCTCCCTTAAAACCAAGAAAAGTGGGGTGAAGAAAAAGGAATGATGTTTACTAGAATAGATTAGTGCAAAAAGTATTAAATCTTAGTATATATCTTTTTCTTTTCTTTTTTTTTTTTTTTTTGGTTTACCTACCATTAACTTCTTAACATTGATGTGTCAAGAAAAAACATATCTTTTTCAAACTGCCTTTACTTAAAAGTGATGTCAATTGTTGCTTCCCCCATTTTGAAAATGACCAAAGATCTTGCTATGATCTCAACTTTTATAGAGAAAAAATAAAAAATTAAAAAAATT

mRNA sequence

TTTTTCTCTCTCTTCTTTCTCTCTCTACTGAGTCTAAAATGGAGTGCAGTGAGGCAAAATCCAGCCCAACTTCAACCATCCTCCATTCTCAGTCGCCGTCCTCCTCCTCCTTCCCGCCGCCGCCGCCGCCACCAAGTGTTCAGGCCGGCGTGGTGGTCAGTCCGTGTGCTGCGTGCAAGATTTTGCGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTACTTTCCTCCGTCGGATCCTCTCAAGTTCACCATTGCTCACCGAGTCTTCGGCGCCAGCAACATCATCAAACTGCTTCAGGATCTTCCTGAATCACAAAGGGCTGATGCAGTGAGTAGTTTGGTGTATGAAGCAAGTGCAAGAATCAGAGATCCAGTTTACGGGTGTGCAGGGGCCATTTGCCAGCTCCAAAAACACATAAACGAACTGCAAGCAGAGCTAGCCAAGACACAGGCTGAGCTTGTCAACATGCAGTGTCACCAAGCCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCTCAAACCCCGCCACCGGCCCCGCTGCCGGACCACCGCTCACTTGATAACAATTTCAACATTGCCACTCCTCAGAGCTACCAAAACTACTCATCTTTGTTTGAGGATAGCAATTTTTGGGAGGCTCTTTGGACATGAGAAAGAAAAAACTTGAACATGGCTGAAAAGGGGGGAAAGATTTCTCAGATAAAAAGTTATGAGAAGTCAAAGTTGATTGGTTTTAAGTAGAATATATGAAAGTTTAGTAGTTGAATATTGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCGTTTGCTCCCTTAAAACCAAGAAAAGTGGGGTGAAGAAAAAGGAATGATGTTTACTAGAATAGATTAGTGCAAAAAGTATTAAATCTTAGTATATATCTTTTTCTTTTCTTTTTTTTTTTTTTTTTGGTTTACCTACCATTAACTTCTTAACATTGATGTGTCAAGAAAAAACATATCTTTTTCAAACTGCCTTTACTTAAAAGTGATGTCAATTGTTGCTTCCCCCATTTTGAAAATGACCAAAGATCTTGCTATGATCTCAACTTTTATAGAGAAAAAATAAAAAATTAAAAAAATT

Coding sequence (CDS)

ATGGAGTGCAGTGAGGCAAAATCCAGCCCAACTTCAACCATCCTCCATTCTCAGTCGCCGTCCTCCTCCTCCTTCCCGCCGCCGCCGCCGCCACCAAGTGTTCAGGCCGGCGTGGTGGTCAGTCCGTGTGCTGCGTGCAAGATTTTGCGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTACTTTCCTCCGTCGGATCCTCTCAAGTTCACCATTGCTCACCGAGTCTTCGGCGCCAGCAACATCATCAAACTGCTTCAGGATCTTCCTGAATCACAAAGGGCTGATGCAGTGAGTAGTTTGGTGTATGAAGCAAGTGCAAGAATCAGAGATCCAGTTTACGGGTGTGCAGGGGCCATTTGCCAGCTCCAAAAACACATAAACGAACTGCAAGCAGAGCTAGCCAAGACACAGGCTGAGCTTGTCAACATGCAGTGTCACCAAGCCAATTTGGTGGCTCTGATTTGCAAGGAATTAGCTCAAACCCCGCCACCGGCCCCGCTGCCGGACCACCGCTCACTTGATAACAATTTCAACATTGCCACTCCTCAGAGCTACCAAAACTACTCATCTTTGTTTGAGGATAGCAATTTTTGGGAGGCTCTTTGGACATGA

Protein sequence

MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPPAPLPDHRSLDNNFNIATPQSYQNYSSLFEDSNFWEALWT

Homology

[Close]

BLAST of Tan0019910 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 2.1e-53
Identity = 118/214 (55.14%), Postives = 147/214 (68.69%), Query Frame = 0


Query: 6   AKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLAPYFPP 65
           AK + T+T ++S SP+SS  PPP P    Q  VV+SPCAACKILRRRC +KCVLAPYFPP
Sbjct: 19  AKVTETTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPP 78

Query: 66  SDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 125
           +DP KFTIAHRVFGASNIIK LQ+LPESQR DAV+S+VYEA AR+RDPVYGCAGAI  LQ
Sbjct: 79  TDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQ 138

Query: 126 KHINELQAELAKTQAELVNMQCHQANLVALICK-ELAQTPPPAPLPDHRSLDNNFN---- 185
           + ++ELQA+LAKTQ ELV MQ  +++L+ LI   E  +           S +++F     
Sbjct: 139 RQVSELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDE 198

Query: 186 -IATPQSYQNYSSLFEDSN--------FWEALWT 206
            I++P    N     ED+N        +W+ LWT
Sbjct: 199 FISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of Tan0019910 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-50
Identity = 115/206 (55.83%), Postives = 138/206 (66.99%), Query Frame = 0


Query: 1   MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLA 60
           ME     S  T+ I+ S S          PPPS+   VV+SPCAACKILRRRC E+CVLA
Sbjct: 1   MESKSDASVATTPIISSSS---------SPPPSLSPRVVLSPCAACKILRRRCAERCVLA 60

Query: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120
           PYFPP+DP KFTIAHRVFGASNIIK LQ+LPESQR DAV+S+VYEA ARIRDPVYGCAGA
Sbjct: 61  PYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGA 120

Query: 121 ICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPPAPLPDHRSLD-NNF 180
           I  LQ+ ++ELQA+LAK Q E+VNMQ  ++NL+ LI     Q        D+ S + N+ 
Sbjct: 121 IYHLQRQVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQE---QDNMSFESNDL 180

Query: 181 NIATPQSYQNYSSLFEDSNFWEALWT 206
                +S  N S L     +W+ LWT
Sbjct: 181 GFLEDKSNTNSSML-----WWDPLWT 189

[Close]

BLAST of Tan0019910 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 5.1e-36
Identity = 68/106 (64.15%), Postives = 87/106 (82.08%), Query Frame = 0


Query: 41  SPCAACKILRRRCTEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVS 100
           SPCA+CK+LRRRC + C+ APYFPP DP KF I H+VFGASN+ K+LQ+LP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 101 SLVYEASARIRDPVYGCAGAICQLQKHINELQAELAKTQAELVNMQ 147
           SLV+EA+AR+RDPVYGC GAI  LQ  +++LQ +LA  QAE++ +Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQ 112

[Close]

BLAST of Tan0019910 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35
Identity = 70/110 (63.64%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 41  SPCAACKILRRRCTEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVS 100
           SPCAACK+LRRRC + CV +PYFP  +P KF   HRVFGASN+ K+LQ+LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 101 SLVYEASARIRDPVYGCAGAICQLQKHINELQAELAKTQAELVNMQCHQA 151
           S+VYEA+AR+RDPVYGC GAI  LQ+ I+ LQA+LA  QAE+V+++  Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of Tan0019910 vs. ExPASy Swiss-Prot
Match: O64836 (LOB domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=LBD10 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-33
Identity = 66/126 (52.38%), Postives = 86/126 (68.25%), Query Frame = 0


Query: 41  SPCAACKILRRRCTEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVS 100
           +PCAACK+LRR+CT++CV APYFPP++P KF   HRVFGASN+ K+L DLP  QR D V+
Sbjct: 4   TPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDTVN 63

Query: 101 SLVYEASARIRDPVYGCAGAICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKEL 160
           SL YEA ARIRDP+YGC G I  LQ+++ ++Q +L   + ELV      A +       +
Sbjct: 64  SLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELVGYLGPDAVIPPPYLPPI 123

Query: 161 AQTPPP 167
              PPP
Sbjct: 124 GNNPPP 129

[Close]

BLAST of Tan0019910 vs. NCBI nr
Match: XP_022157927.1 (LOB domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 359.8 bits (922), Expect = 1.6e-95
Identity = 182/205 (88.78%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 1   MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLA 60
           MECSEAKS+ TSTIL SQSPS    P PPPPPS+ AGVVVSPCAACKILRRRC EKCVLA
Sbjct: 1   MECSEAKSNTTSTILRSQSPS----PSPPPPPSIPAGVVVSPCAACKILRRRCAEKCVLA 60

Query: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120
           PYFPPSDP KFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA
Sbjct: 61  PYFPPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120

Query: 121 ICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPPAPLPDHRSLDNNFN 180
           ICQLQK INELQAELAKTQAELVNM CHQA+LVALICKELAQTPPP P PDHRSLDNNFN
Sbjct: 121 ICQLQKQINELQAELAKTQAELVNMHCHQASLVALICKELAQTPPPVPPPDHRSLDNNFN 180

Query: 181 IATPQSYQNYSSLFEDSNFWEALWT 206
           IATPQSYQNY+   EDSN WE LWT
Sbjct: 181 IATPQSYQNYTPFLEDSNIWEPLWT 201

[Close]

BLAST of Tan0019910 vs. NCBI nr
Match: XP_038895012.1 (LOB domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 346.7 bits (888), Expect = 1.4e-91
Identity = 178/206 (86.41%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 1   MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLA 60
           MEC EAKS   STI  SQSPSSS    P PPPS+Q GVVVSPCAACKILRRRC EKCVLA
Sbjct: 1   MECCEAKSGQASTIFLSQSPSSS----PSPPPSIQTGVVVSPCAACKILRRRCAEKCVLA 60

Query: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120
           PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEA+ARIRDPVYGCAGA
Sbjct: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEANARIRDPVYGCAGA 120

Query: 121 ICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPP-APLPDHRSLDNNF 180
           ICQLQK INELQAELAKTQAELVN+ C QANLVALICKEL Q PPP +PLPDHRSLDNNF
Sbjct: 121 ICQLQKQINELQAELAKTQAELVNIHCRQANLVALICKELTQLPPPMSPLPDHRSLDNNF 180

Query: 181 NIATPQSYQNYSSLFEDSNFWEALWT 206
           NIATPQSYQ Y+SLFEDSN W+ LWT
Sbjct: 181 NIATPQSYQGYTSLFEDSNIWDPLWT 202

[Close]

BLAST of Tan0019910 vs. NCBI nr
Match: XP_008463550.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 338.6 bits (867), Expect = 3.8e-89
Identity = 177/209 (84.69%), Postives = 185/209 (88.52%), Query Frame = 0


Query: 1   MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLA 60
           ME  E KSSPTST+L SQSPS    P P PPP+VQA VVVSPCAACKILRRRC EKCVLA
Sbjct: 1   MESREVKSSPTSTLL-SQSPS----PSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLA 60

Query: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120
           PYFPPSDPLKFTIAHR+FGASNIIKLL DLP+SQRADAVSSLVYEASARIRDPVYGCAGA
Sbjct: 61  PYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGA 120

Query: 121 ICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPP----APLPDHRSLD 180
           ICQLQK INELQAELAKTQAELVN+ CHQ NLVALICKELAQTPPP    + LPDHRSLD
Sbjct: 121 ICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLD 180

Query: 181 NNFNIATPQSYQNYSSLFEDSNFWEALWT 206
           NNFNIATPQSYQ Y+SLFEDSN W+ LWT
Sbjct: 181 NNFNIATPQSYQGYTSLFEDSNIWDPLWT 204

[Close]

BLAST of Tan0019910 vs. NCBI nr
Match: XP_022998902.1 (LOB domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 337.8 bits (865), Expect = 6.5e-89
Identity = 174/205 (84.88%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 1   MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLA 60
           MECS+AKS PTSTIL SQS      PPP PPP VQAGVVV+PCAACKILRRRC EKCVLA
Sbjct: 1   MECSDAKSGPTSTILRSQS------PPPTPPPCVQAGVVVTPCAACKILRRRCAEKCVLA 60

Query: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120
           PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA
Sbjct: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120

Query: 121 ICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPPAPLPDHRSLDNNFN 180
           IC LQK INELQAE+AKT AELVNMQCHQANLVALICKEL QTP P P PDH SLDNNF+
Sbjct: 121 ICHLQKQINELQAEVAKTHAELVNMQCHQANLVALICKELTQTPAPTPPPDHCSLDNNFS 180

Query: 181 IATPQSYQNYSSLFEDSNFWEALWT 206
            ATPQSY     LF+DSN WEALWT
Sbjct: 181 TATPQSY----PLFDDSNIWEALWT 195

[Close]

BLAST of Tan0019910 vs. NCBI nr
Match: XP_023523637.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87
Identity = 174/206 (84.47%), Postives = 179/206 (86.89%), Query Frame = 0


Query: 1   MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLA 60
           MECS+AKS PTS IL SQS      PPPPPPP VQAGVVV+PCAACKILRRRC EKCVLA
Sbjct: 1   MECSDAKSGPTSIILRSQS------PPPPPPPCVQAGVVVTPCAACKILRRRCAEKCVLA 60

Query: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120
           PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA
Sbjct: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120

Query: 121 ICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPPA-PLPDHRSLDNNF 180
           IC LQK INELQAE+AKT AELVNMQCHQANLVALICKEL QTP P  P PDH SLDNNF
Sbjct: 121 ICHLQKQINELQAEVAKTHAELVNMQCHQANLVALICKELTQTPAPTPPPPDHCSLDNNF 180

Query: 181 NIATPQSYQNYSSLFEDSNFWEALWT 206
           + ATPQSY     LF+DSN WEALWT
Sbjct: 181 SSATPQSY----PLFDDSNIWEALWT 196

[Close]

BLAST of Tan0019910 vs. ExPASy TrEMBL
Match: A0A6J1DVT7 (LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111024535 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.7e-96
Identity = 182/205 (88.78%), Postives = 186/205 (90.73%), Query Frame = 0


Query: 1   MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLA 60
           MECSEAKS+ TSTIL SQSPS    P PPPPPS+ AGVVVSPCAACKILRRRC EKCVLA
Sbjct: 1   MECSEAKSNTTSTILRSQSPS----PSPPPPPSIPAGVVVSPCAACKILRRRCAEKCVLA 60

Query: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120
           PYFPPSDP KFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA
Sbjct: 61  PYFPPSDPFKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120

Query: 121 ICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPPAPLPDHRSLDNNFN 180
           ICQLQK INELQAELAKTQAELVNM CHQA+LVALICKELAQTPPP P PDHRSLDNNFN
Sbjct: 121 ICQLQKQINELQAELAKTQAELVNMHCHQASLVALICKELAQTPPPVPPPDHRSLDNNFN 180

Query: 181 IATPQSYQNYSSLFEDSNFWEALWT 206
           IATPQSYQNY+   EDSN WE LWT
Sbjct: 181 IATPQSYQNYTPFLEDSNIWEPLWT 201

[Close]

BLAST of Tan0019910 vs. ExPASy TrEMBL
Match: A0A1S3CK12 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501671 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.8e-89
Identity = 177/209 (84.69%), Postives = 185/209 (88.52%), Query Frame = 0


Query: 1   MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLA 60
           ME  E KSSPTST+L SQSPS    P P PPP+VQA VVVSPCAACKILRRRC EKCVLA
Sbjct: 1   MESREVKSSPTSTLL-SQSPS----PSPSPPPTVQAPVVVSPCAACKILRRRCAEKCVLA 60

Query: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120
           PYFPPSDPLKFTIAHR+FGASNIIKLL DLP+SQRADAVSSLVYEASARIRDPVYGCAGA
Sbjct: 61  PYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGA 120

Query: 121 ICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPP----APLPDHRSLD 180
           ICQLQK INELQAELAKTQAELVN+ CHQ NLVALICKELAQTPPP    + LPDHRSLD
Sbjct: 121 ICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLD 180

Query: 181 NNFNIATPQSYQNYSSLFEDSNFWEALWT 206
           NNFNIATPQSYQ Y+SLFEDSN W+ LWT
Sbjct: 181 NNFNIATPQSYQGYTSLFEDSNIWDPLWT 204

[Close]

BLAST of Tan0019910 vs. ExPASy TrEMBL
Match: A0A6J1K9A0 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493422 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.2e-89
Identity = 174/205 (84.88%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 1   MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLA 60
           MECS+AKS PTSTIL SQS      PPP PPP VQAGVVV+PCAACKILRRRC EKCVLA
Sbjct: 1   MECSDAKSGPTSTILRSQS------PPPTPPPCVQAGVVVTPCAACKILRRRCAEKCVLA 60

Query: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120
           PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA
Sbjct: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120

Query: 121 ICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPPAPLPDHRSLDNNFN 180
           IC LQK INELQAE+AKT AELVNMQCHQANLVALICKEL QTP P P PDH SLDNNF+
Sbjct: 121 ICHLQKQINELQAEVAKTHAELVNMQCHQANLVALICKELTQTPAPTPPPDHCSLDNNFS 180

Query: 181 IATPQSYQNYSSLFEDSNFWEALWT 206
            ATPQSY     LF+DSN WEALWT
Sbjct: 181 TATPQSY----PLFDDSNIWEALWT 195

[Close]

BLAST of Tan0019910 vs. ExPASy TrEMBL
Match: A0A6J1GBV4 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111452554 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.9e-87
Identity = 173/206 (83.98%), Postives = 178/206 (86.41%), Query Frame = 0


Query: 1   MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLA 60
           MECS+AKS PTS IL SQS       PPPPPP VQAGVVV+PCAACKILRRRC EKCVLA
Sbjct: 1   MECSDAKSGPTSIILRSQS------SPPPPPPCVQAGVVVTPCAACKILRRRCAEKCVLA 60

Query: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120
           PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA
Sbjct: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120

Query: 121 ICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPPA-PLPDHRSLDNNF 180
           IC LQK INELQAE+AKT AELVNMQCHQANLVALICKEL QTP P  P PDH SLDNNF
Sbjct: 121 ICHLQKQINELQAEVAKTHAELVNMQCHQANLVALICKELTQTPAPTPPPPDHCSLDNNF 180

Query: 181 NIATPQSYQNYSSLFEDSNFWEALWT 206
           + ATPQSY     LF+DSN WEALWT
Sbjct: 181 STATPQSY----PLFDDSNIWEALWT 196

[Close]

BLAST of Tan0019910 vs. ExPASy TrEMBL
Match: A0A6J1I3T6 (LOB domain-containing protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469412 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.6e-85
Identity = 169/201 (84.08%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 5   EAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLAPYFP 64
           +AKSSPTSTI  SQSPSSS   P PPPPSVQAG+VVSPCAACK LRRRCTEKCVLAPYFP
Sbjct: 2   DAKSSPTSTIFRSQSPSSS---PLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFP 61

Query: 65  PSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQL 124
           PSDPLKFTIAHR+FGASNIIKLLQDLPESQR DAVSSLVYEASARIRDPVYGCAGAI QL
Sbjct: 62  PSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQL 121

Query: 125 QKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPPAPLPDHRSLDNNFNIATP 184
           QK INELQAELAKTQAELVN+  HQ NLVALICKELAQTPPP   PDH +LDNN N A P
Sbjct: 122 QKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHHALDNNLNTAIP 181

Query: 185 QSYQNYSSLFEDSNFWEALWT 206
           QSY N   LFEDS+ WE LWT
Sbjct: 182 QSYTN---LFEDSSIWEPLWT 196

[Close]

BLAST of Tan0019910 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 210.3 bits (534), Expect = 1.5e-54
Identity = 118/214 (55.14%), Postives = 147/214 (68.69%), Query Frame = 0


Query: 6   AKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLAPYFPP 65
           AK + T+T ++S SP+SS  PPP P    Q  VV+SPCAACKILRRRC +KCVLAPYFPP
Sbjct: 19  AKVTETTTPVNSPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPP 78

Query: 66  SDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGAICQLQ 125
           +DP KFTIAHRVFGASNIIK LQ+LPESQR DAV+S+VYEA AR+RDPVYGCAGAI  LQ
Sbjct: 79  TDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQ 138

Query: 126 KHINELQAELAKTQAELVNMQCHQANLVALICK-ELAQTPPPAPLPDHRSLDNNFN---- 185
           + ++ELQA+LAKTQ ELV MQ  +++L+ LI   E  +           S +++F     
Sbjct: 139 RQVSELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSFESGDE 198

Query: 186 -IATPQSYQNYSSLFEDSN--------FWEALWT 206
            I++P    N     ED+N        +W+ LWT
Sbjct: 199 FISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of Tan0019910 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 201.1 bits (510), Expect = 8.9e-52
Identity = 115/206 (55.83%), Postives = 138/206 (66.99%), Query Frame = 0


Query: 1   MECSEAKSSPTSTILHSQSPSSSSFPPPPPPPSVQAGVVVSPCAACKILRRRCTEKCVLA 60
           ME     S  T+ I+ S S          PPPS+   VV+SPCAACKILRRRC E+CVLA
Sbjct: 1   MESKSDASVATTPIISSSS---------SPPPSLSPRVVLSPCAACKILRRRCAERCVLA 60

Query: 61  PYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVSSLVYEASARIRDPVYGCAGA 120
           PYFPP+DP KFTIAHRVFGASNIIK LQ+LPESQR DAV+S+VYEA ARIRDPVYGCAGA
Sbjct: 61  PYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGA 120

Query: 121 ICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKELAQTPPPAPLPDHRSLD-NNF 180
           I  LQ+ ++ELQA+LAK Q E+VNMQ  ++NL+ LI     Q        D+ S + N+ 
Sbjct: 121 IYHLQRQVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQKQE---QDNMSFESNDL 180

Query: 181 NIATPQSYQNYSSLFEDSNFWEALWT 206
                +S  N S L     +W+ LWT
Sbjct: 181 GFLEDKSNTNSSML-----WWDPLWT 189

[Close]

BLAST of Tan0019910 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 152.5 bits (384), Expect = 3.6e-37
Identity = 68/106 (64.15%), Postives = 87/106 (82.08%), Query Frame = 0


Query: 41  SPCAACKILRRRCTEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVS 100
           SPCA+CK+LRRRC + C+ APYFPP DP KF I H+VFGASN+ K+LQ+LP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 101 SLVYEASARIRDPVYGCAGAICQLQKHINELQAELAKTQAELVNMQ 147
           SLV+EA+AR+RDPVYGC GAI  LQ  +++LQ +LA  QAE++ +Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQ 112

[Close]

BLAST of Tan0019910 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 151.4 bits (381), Expect = 8.1e-37
Identity = 70/110 (63.64%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 41  SPCAACKILRRRCTEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVS 100
           SPCAACK+LRRRC + CV +PYFP  +P KF   HRVFGASN+ K+LQ+LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 101 SLVYEASARIRDPVYGCAGAICQLQKHINELQAELAKTQAELVNMQCHQA 151
           S+VYEA+AR+RDPVYGC GAI  LQ+ I+ LQA+LA  QAE+V+++  Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of Tan0019910 vs. TAIR 10
Match: AT2G23660.1 (LOB domain-containing protein 10 )

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 66/126 (52.38%), Postives = 86/126 (68.25%), Query Frame = 0


Query: 41  SPCAACKILRRRCTEKCVLAPYFPPSDPLKFTIAHRVFGASNIIKLLQDLPESQRADAVS 100
           +PCAACK+LRR+CT++CV APYFPP++P KF   HRVFGASN+ K+L DLP  QR D V+
Sbjct: 4   TPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDTVN 63

Query: 101 SLVYEASARIRDPVYGCAGAICQLQKHINELQAELAKTQAELVNMQCHQANLVALICKEL 160
           SL YEA ARIRDP+YGC G I  LQ+++ ++Q +L   + ELV      A +       +
Sbjct: 64  SLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELVGYLGPDAVIPPPYLPPI 123

Query: 161 AQTPPP 167
              PPP
Sbjct: 124 GNNPPP 129

The following BLAST results are available for this feature:

BLAST of Tan0019910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK08	2.1e-53	55.14	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9LQR0	1.2e-50	55.83	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q8LBW3	5.1e-36	64.15	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	1.1e-35	63.64	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
O64836	1.8e-33	52.38	LOB domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=LBD10 PE=2 S...	[more]

BLAST of Tan0019910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157927.1	1.6e-95	88.78	LOB domain-containing protein 11-like [Momordica charantia]	[more]
XP_038895012.1	1.4e-91	86.41	LOB domain-containing protein 1-like [Benincasa hispida]	[more]
XP_008463550.1	3.8e-89	84.69	PREDICTED: LOB domain-containing protein 1-like [Cucumis melo]	[more]
XP_022998902.1	6.5e-89	84.88	LOB domain-containing protein 1-like [Cucurbita maxima]	[more]
XP_023523637.1	1.2e-87	84.47	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0019910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DVT7	7.7e-96	88.78	LOB domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A1S3CK12	1.8e-89	84.69	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501671 PE=...	[more]
A0A6J1K9A0	3.2e-89	84.88	LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493422...	[more]
A0A6J1GBV4	3.9e-87	83.98	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A6J1I3T6	3.6e-85	84.08	LOB domain-containing protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Tan0019910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28500.1	1.5e-54	55.14	LOB domain-containing protein 11	[more]
AT1G07900.1	8.9e-52	55.83	LOB domain-containing protein 1	[more]
AT2G30130.1	3.6e-37	64.15	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	8.1e-37	63.64	LOB domain-containing protein 4	[more]
AT2G23660.1	1.3e-34	52.38	LOB domain-containing protein 10	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR31301:SF137	LOB DOMAIN-CONTAINING PROTEIN 1	coord: 29..204
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 29..204
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 42..139 e-value: 4.2E-41 score: 139.5
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 41..142 score: 26.756956

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019910.1	Tan0019910.1	mRNA