Tan0019703 (gene) Snake gourd v1

Overview


Name	Tan0019703
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	zinc finger CCCH domain-containing protein 39-like
Location	LG06: 2952107 .. 2954357 (+)
RNA-Seq Expression	Tan0019703
Synteny	Tan0019703

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGAAGGCAAAACGACATACTCAAATCGAATCGAAGCACCCACTTCCGTTTATGATGTGAACTTCACCGTCGAATCTCACGGCGGAGTCCATTTCATCTTCTCCGTTGAGTTTTCCGATCGACACCTAGGGTTTCGCTCTCGTATTTCTCCACCTTCCTTGTAAATATTGTACAAATAATCTGTGTTATACCTGTCAATAAATTGGATGTATCATTTGCCATTTCAAATTTCATCGATTTCTTCCAAATTTGTGGACTTAGGGTTGCTCTTCTGGAAGTTTTTGCGACGCTCTAGTTGCTTTCTGGACAATTTTTCATCAGGTATCTCCCGGAGTTTTTTTTTATTCTTTTACAACAAATTTGGTCTTCTCGACTTTACTGCATGTGACAATTCTTGATTCGCTTGCGATGTACAGAGATTTAAGCGATTTTCGCTATTGTAACTTTTTGGAAAAGAAATTTTGCTTAGAATCCTACTGTTTTTCAGTTCAATGAACTTGAAACTTGAAAGTGGATGGTAAGGCCCTTGAAATGAGTGCTCCTTATCCTTTTAACCAAATTACTCCTCCGGACCCTGAGGTTCGTTTGCCGCCATTGCCTCCTCGATATTCTGATGGTCGACTCCCATCATTCTATCAGCCTCCGATGTCTGGAATTGAACCAAGTTGGGGAATGCCTTCAAATTTTGAGATTCCACCATGGAACAATCTGAACATTGGGTTACCTGACCATGAGTGGAGGTTTAGGTATCCACCTGCCTTTAATGATGCTCGTAGATGGTTACCTTCTTGGCGAGGAATTGAGTTCCATGAAGGTCGATTGCCGGGGCGTTCGAATGTTGACTGTCAGGCTGGAATATCGACTGAAATGAAAGTATGCAGACAGTTCCAACGCAGGAGGAAATGTGCATATGGGGATCAGTGTCGTTTCCTTCATGAAATTCCTGAGAAAACTAAGGATTTTGGCTCCTCCAGTCAGAATTATGAGGTCAGAGCTGTAGATTCTGGTCATGTTATGGATCGAAGAAGTGGGTTTGATCAATTGGAAGAAGTCAGATCAAAGGTGCAAACCAAGATTGTTGCCCGTAGTGAGATTCCAAAGCCTGTAAGTTGCAAAACAAGGCCCTGTTACCCCTGGCAAACGACTGGTCACTGCCCATATGGGGAGGGTTGTCGCTTTGCTCATGGAGAAGCAGGTATTTTGAGACTTTAGTCTACTCATCTTTTTCCTATTTCGTTTTCATTACCATGTCATATGTTTTCAAATGACTTACAACTCTCCAAGCAAGAATGGATGTCTCACCATATAAGATTTTATCTCTTTTCTTTTGCCATGGCTTGATTCAAATGAACCCTCTTTCCTTTTGAGTTCAACAATAGGTTGGGGGATTCGACCCTCTGGCTTCTCGATCAAGAGTATATGTCTTTACATATATTAGCAAATGAATCTCCCTTACTTCCATTCCCATTTGTTGGTTGATTAACTTTTGTTGGGGGACGGGGGTGGAAATGGTGAACAATTTAGACTTGAGATCTTTTTAAGCATAGGTTAGATATTGTTCCTCAGAACATGAAAACACAAAACGCTGATTACTTATCCATGTATATAAATAAACATTATAACACTGTAAGATGCAAGAAGATTTACCAACCGAATGATAAATGTCAACCATGTGGATTTACTCATTTATAAATAGTGATTTACATGTACATGAAATCAAAAGTTGGCCATTGTCAAACTACAGGCATTGATATTTCCCTTTTCATCTTTGTTTTTGGAGAAAATAGAACTACAGAAGCTTGAGTCCTGCAGTGCATCAGAACATGGGAGCATAGGTGGTGCTTCTGCAACAACTTCTGCTGCTGCCACAGCTGGACTAAGGAGCAGCAGAGGAATTGGAAACGACTGTAAGAATAAAGGACCAAGAATGAAGCAATTCTTTAAATCAAAGGAGCTTAAGAAGTTGATTGGCATTTATGCCGACTGGCTCGAAAATTGAATTTTCTGCATGACTTGCAGTACAAAGATTTGGCCAAATACTGAGGCTTTTTTCAATTCTCACAAATGGTTGTAAGTGCATTTTGACATTTAAATGAATATAGGGTATGAAAAATAGATATTGTTCTGCACAAGAATATGAAAGTTTCATTTTTTTTTCATGCATGACTTCTAAATATAGTATAGCAAAGGCAAAATGACTTGTCTGTTCATGGTATTACATCTGTCAATTTGTTTGGCTTCTCTTTTTGA

mRNA sequence

TCGGAAGGCAAAACGACATACTCAAATCGAATCGAAGCACCCACTTCCGTTTATGATGTGAACTTCACCGTCGAATCTCACGGCGGAGTCCATTTCATCTTCTCCGTTGAGTTTTCCGATCGACACCTAGGGTTTCGCTCTCGGTTGCTCTTCTGGAAGTTTTTGCGACGCTCTAGTTGCTTTCTGGACAATTTTTCATCAGTTCAATGAACTTGAAACTTGAAAGTGGATGGTAAGGCCCTTGAAATGAGTGCTCCTTATCCTTTTAACCAAATTACTCCTCCGGACCCTGAGGTTCGTTTGCCGCCATTGCCTCCTCGATATTCTGATGGTCGACTCCCATCATTCTATCAGCCTCCGATGTCTGGAATTGAACCAAGTTGGGGAATGCCTTCAAATTTTGAGATTCCACCATGGAACAATCTGAACATTGGGTTACCTGACCATGAGTGGAGGTTTAGGTATCCACCTGCCTTTAATGATGCTCGTAGATGGTTACCTTCTTGGCGAGGAATTGAGTTCCATGAAGGTCGATTGCCGGGGCGTTCGAATGTTGACTGTCAGGCTGGAATATCGACTGAAATGAAAGTATGCAGACAGTTCCAACGCAGGAGGAAATGTGCATATGGGGATCAGTGTCGTTTCCTTCATGAAATTCCTGAGAAAACTAAGGATTTTGGCTCCTCCAGTCAGAATTATGAGGTCAGAGCTGTAGATTCTGGTCATGTTATGGATCGAAGAAGTGGGTTTGATCAATTGGAAGAAGTCAGATCAAAGGTGCAAACCAAGATTGTTGCCCGTAGTGAGATTCCAAAGCCTGTAAGTTGCAAAACAAGGCCCTGTTACCCCTGGCAAACGACTGGTCACTGCCCATATGGGGAGGGTTGTCGCTTTGCTCATGGAGAAGCAGAACTACAGAAGCTTGAGTCCTGCAGTGCATCAGAACATGGGAGCATAGGTGGTGCTTCTGCAACAACTTCTGCTGCTGCCACAGCTGGACTAAGGAGCAGCAGAGGAATTGGAAACGACTGTAAGAATAAAGGACCAAGAATGAAGCAATTCTTTAAATCAAAGGAGCTTAAGAAGTTGATTGGCATTTATGCCGACTGGCTCGAAAATTGAATTTTCTGCATGACTTGCAGTACAAAGATTTGGCCAAATACTGAGGCTTTTTTCAATTCTCACAAATGGTTGTAAGTGCATTTTGACATTTAAATGAATATAGGGTATGAAAAATAGATATTGTTCTGCACAAGAATATGAAAGTTTCATTTTTTTTTCATGCATGACTTCTAAATATAGTATAGCAAAGGCAAAATGACTTGTCTGTTCATGGTATTACATCTGTCAATTTGTTTGGCTTCTCTTTTTGA

Coding sequence (CDS)

ATGAGTGCTCCTTATCCTTTTAACCAAATTACTCCTCCGGACCCTGAGGTTCGTTTGCCGCCATTGCCTCCTCGATATTCTGATGGTCGACTCCCATCATTCTATCAGCCTCCGATGTCTGGAATTGAACCAAGTTGGGGAATGCCTTCAAATTTTGAGATTCCACCATGGAACAATCTGAACATTGGGTTACCTGACCATGAGTGGAGGTTTAGGTATCCACCTGCCTTTAATGATGCTCGTAGATGGTTACCTTCTTGGCGAGGAATTGAGTTCCATGAAGGTCGATTGCCGGGGCGTTCGAATGTTGACTGTCAGGCTGGAATATCGACTGAAATGAAAGTATGCAGACAGTTCCAACGCAGGAGGAAATGTGCATATGGGGATCAGTGTCGTTTCCTTCATGAAATTCCTGAGAAAACTAAGGATTTTGGCTCCTCCAGTCAGAATTATGAGGTCAGAGCTGTAGATTCTGGTCATGTTATGGATCGAAGAAGTGGGTTTGATCAATTGGAAGAAGTCAGATCAAAGGTGCAAACCAAGATTGTTGCCCGTAGTGAGATTCCAAAGCCTGTAAGTTGCAAAACAAGGCCCTGTTACCCCTGGCAAACGACTGGTCACTGCCCATATGGGGAGGGTTGTCGCTTTGCTCATGGAGAAGCAGAACTACAGAAGCTTGAGTCCTGCAGTGCATCAGAACATGGGAGCATAGGTGGTGCTTCTGCAACAACTTCTGCTGCTGCCACAGCTGGACTAAGGAGCAGCAGAGGAATTGGAAACGACTGTAAGAATAAAGGACCAAGAATGAAGCAATTCTTTAAATCAAAGGAGCTTAAGAAGTTGATTGGCATTTATGCCGACTGGCTCGAAAATTGA

Protein sequence

MSAPYPFNQITPPDPEVRLPPLPPRYSDGRLPSFYQPPMSGIEPSWGMPSNFEIPPWNNLNIGLPDHEWRFRYPPAFNDARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTEMKVCRQFQRRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLEEVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSASEHGSIGGASATTSAAATAGLRSSRGIGNDCKNKGPRMKQFFKSKELKKLIGIYADWLEN

Homology

[Close]

BLAST of Tan0019703 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.0e-13
Identity = 62/227 (27.31%), Postives = 95/227 (41.85%), Query Frame = 0


Query: 74  PPAFNDARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTEMKVCRQFQRRRKCAYGDQCRF 133
           PPA  D  R     R  E         +N +    I   MK+CR+F    +C YGD+C F
Sbjct: 147 PPAGQDRERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNF 206

Query: 134 LHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLEEVRSKVQTKIVA---RSEIPK 193
           +HE   K ++     +   V +V +            L EV  +    + A      + K
Sbjct: 207 IHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVK 266

Query: 194 PVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQ----KLESCSASEHGSIGGASA--TT 253
            V  KTR C  +  TG CP+G+ C FAHG+AEL     ++E  + +   S+   +     
Sbjct: 267 TVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPAN 326

Query: 254 SAAATAGLRSSRGIGNDCKNKGPRMKQFFKSKELKKLIGIYADWLEN 292
            A A   +       +    +G R K   K  + KK+  IY DW+++
Sbjct: 327 EAFAMKPITQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDD 373

[Close]

BLAST of Tan0019703 vs. ExPASy Swiss-Prot
Match: Q9LQM3 (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-09
Identity = 56/229 (24.45%), Postives = 89/229 (38.86%), Query Frame = 0


Query: 94  EGRLPGRSNVDCQAGISTEMKVCRQFQRRRKCAYGDQCRFLHEIPEKTKD-----FGSSS 153
           E ++P   +   ++G S + + C++F     C YG+ C FLH+   + ++      G   
Sbjct: 156 EFQIPSLVSSTAESGRSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGG 215

Query: 154 QNYEVRAVDSGHVMDRRSGFDQLEEVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHC 213
                     G  +        +  +     +   +  +I KP + KTR C  W+ TG+C
Sbjct: 216 YGSGGGGGSGGGSVGGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYC 275

Query: 214 PYGEGCRFAHGEAELQKLESCSASEHGSIG---------------GASATTS-------- 273
           P+G  C FAHG AEL +       E G  G               G S TT+        
Sbjct: 276 PFGAKCHFAHGAAELHRFGGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPH 335

Query: 274 ---AAATAGLRSSRGIGNDCKNKGPRMKQFFKSKELKKLIGIYADWLEN 292
              A+   G+   R      +  G R  Q  K K   K+  IY DW+++
Sbjct: 336 NADASYHTGVALQRASSAVTQKPGIRTHQ--KWKGPAKISRIYGDWIDD 382

[Close]

BLAST of Tan0019703 vs. ExPASy Swiss-Prot
Match: Q84UQ3 (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159800 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-09
Identity = 55/198 (27.78%), Postives = 83/198 (41.92%), Query Frame = 0


Query: 116 CRQFQRRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLEEVR 175
           C++F     C YGD C FLH+   K ++  + S +  V     G       G        
Sbjct: 175 CKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGG-------GSYNSAAAA 234

Query: 176 SKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQK-------LES 235
           +   +       + KP + KTR C  W+ TG+CP+G  C FAHG AEL K       ++S
Sbjct: 235 AASASAAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDS 294

Query: 236 CSA-----SEHGSIGG-ASATTSAAATA----------GLRSSRGIGNDCKNKGPRMKQF 291
             A     S+   +   A A T+AA+T           G+++ R      +  G   +  
Sbjct: 295 RDAAATPDSKQAVVSAKAPAETAAASTTVLPHADVYHLGVQAQRSTIAG-QRSGQVQRPI 354

[Close]

BLAST of Tan0019703 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.6e-06
Identity = 36/126 (28.57%), Postives = 52/126 (41.27%), Query Frame = 0


Query: 100 RSNVDCQAGISTEMKVCRQFQRRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSG 159
           R++   Q G+ +++K C +F     C +G  C FLH  P            Y+  A  + 
Sbjct: 22  RASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFP----------GGYQAAAKMTS 81

Query: 160 HVMDRRSGFDQLEEVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHG 219
           H      G   +     ++     A +  P   S KTR C  + T   C +G  C FAHG
Sbjct: 82  H------GGTAVAAPPGRMPLGPGAPNG-PPTSSVKTRMCNKYNTAEGCKWGSKCHFAHG 130

Query: 220 EAELQK 226
           E EL K
Sbjct: 142 ERELGK 130

[Close]

BLAST of Tan0019703 vs. ExPASy Swiss-Prot
Match: Q5PP65 (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=At2g35430 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.9e-05
Identity = 35/113 (30.97%), Postives = 52/113 (46.02%), Query Frame = 0


Query: 190 KPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSASEHGSIG----------G 249
           K  + KTR C  WQTTG+CP+G  C FAHG +EL             IG          G
Sbjct: 140 KSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRG 199

Query: 250 ASATTSAAATAGLRSSR-GIGNDCKNKGPRMKQFFKSKELKKLIGIYADWLEN 292
              T ++  + G+ S R       K  G R ++ +K  +  K+  +Y DW+++
Sbjct: 200 QVDTVTSLVSPGVSSQRTSSAVTQKPNGVRTQRKWKGPD--KISRVYGDWIDD 250

[Close]

BLAST of Tan0019703 vs. NCBI nr
Match: KAG7025772.1 (Zinc finger CCCH domain-containing protein 39 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 446.0 bits (1146), Expect = 2.4e-121
Identity = 228/300 (76.00%), Postives = 244/300 (81.33%), Query Frame = 0


Query: 1   MSAPYPFNQITPPD-------PEVRLPPLPPRYSDGRLPSFYQPPMSGIEPSWGMPSNFE 60
           MS PYPF+Q+TPPD       P +R PPLPPRY+ GR PSFYQP MS I PS  MPSNFE
Sbjct: 1   MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFE 60

Query: 61  IPPWNNLNIGLPDHEWRFRYPPAFND-ARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTE 120
           IP WNN++IGL D+E  +RY  A ND  R WLPSWRGIEFHE RLP    V+ + G+STE
Sbjct: 61  IPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPACPIVNSRTGMSTE 120

Query: 121 MKVCRQFQRRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLE 180
           MKVCRQFQRR KCAYGDQCRFLH+IPE TKDFGSSSQN+EVRAV SGHVMD +S FDQ E
Sbjct: 121 MKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFE 180

Query: 181 EVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSAS 240
           EVRSKVQTKIVARSEIP PV+CKTR CY WQTTGHC YGE CRFAHGEAELQKLESCS S
Sbjct: 181 EVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTS 240

Query: 241 EHGSIGGASATTSAAATAGLRSSRGIGNDCKNKG-PRMKQFFKSKELKKLIGIYADWLEN 292
           E G +GGASATT AAA AGLR SRGIG DCKNKG  RMKQ FKSKE KKLIGIYADWLEN
Sbjct: 241 ERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN 300

[Close]

BLAST of Tan0019703 vs. NCBI nr
Match: XP_022964047.1 (zinc finger CCCH domain-containing protein 39-like [Cucurbita moschata])

HSP 1 Score: 445.3 bits (1144), Expect = 4.1e-121
Identity = 228/300 (76.00%), Postives = 244/300 (81.33%), Query Frame = 0


Query: 1   MSAPYPFNQITPPD-------PEVRLPPLPPRYSDGRLPSFYQPPMSGIEPSWGMPSNFE 60
           MS PYPF+Q+TPPD       P +R PPLPPRY+ GR PSFYQP MS I PS  MPSNFE
Sbjct: 1   MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFE 60

Query: 61  IPPWNNLNIGLPDHEWRFRYPPAFND-ARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTE 120
           IP WNN++IGL D+E  +RY  A ND  R WLPSWRGIEFHE RLP    V+ + G+STE
Sbjct: 61  IPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMSTE 120

Query: 121 MKVCRQFQRRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLE 180
           MKVCRQFQRR KCAYGDQCRFLH+IPE TKDFGSSSQN+EVRAV SGHVMD +S FDQ E
Sbjct: 121 MKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFE 180

Query: 181 EVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSAS 240
           EVRSKVQTKIVARSEIP PV+CKTR CY WQTTGHC YGE CRFAHGEAELQKLESCS S
Sbjct: 181 EVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTS 240

Query: 241 EHGSIGGASATTSAAATAGLRSSRGIGNDCKNKG-PRMKQFFKSKELKKLIGIYADWLEN 292
           E G +GGASATT AAA AGLR SRGIG DCKNKG  RMKQ FKSKE KKLIGIYADWLEN
Sbjct: 241 ERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN 300

[Close]

BLAST of Tan0019703 vs. NCBI nr
Match: KAG6593433.1 (Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 444.9 bits (1143), Expect = 5.4e-121
Identity = 227/300 (75.67%), Postives = 244/300 (81.33%), Query Frame = 0


Query: 1   MSAPYPFNQITPPD-------PEVRLPPLPPRYSDGRLPSFYQPPMSGIEPSWGMPSNFE 60
           MS PYPF+Q+TPPD       P +R PPLPPRY+ GR PSFYQP MS I PS  MPSNFE
Sbjct: 1   MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFE 60

Query: 61  IPPWNNLNIGLPDHEWRFRYPPAFND-ARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTE 120
           IP WNN++IGL D+E  +RY  A ND  R WLPSWRGIEFHE RLP    V+ + G+STE
Sbjct: 61  IPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMSTE 120

Query: 121 MKVCRQFQRRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLE 180
           MKVCRQFQRR KCAYGDQCRFLH+IPE TKDFGSSSQN+E+RAV SGHVMD +S FDQ E
Sbjct: 121 MKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEIRAVASGHVMDGKSMFDQFE 180

Query: 181 EVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSAS 240
           EVRSKVQTKIVARSEIP PV+CKTR CY WQTTGHC YGE CRFAHGEAELQKLESCS S
Sbjct: 181 EVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTS 240

Query: 241 EHGSIGGASATTSAAATAGLRSSRGIGNDCKNKG-PRMKQFFKSKELKKLIGIYADWLEN 292
           E G +GGASATT AAA AGLR SRGIG DCKNKG  RMKQ FKSKE KKLIGIYADWLEN
Sbjct: 241 ERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN 300

[Close]

BLAST of Tan0019703 vs. NCBI nr
Match: XP_023513806.1 (zinc finger CCCH domain-containing protein 39-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441.0 bits (1133), Expect = 7.8e-120
Identity = 224/295 (75.93%), Postives = 243/295 (82.37%), Query Frame = 0


Query: 1   MSAPYPFNQITPPDPEVR--LPPLPPRYSDGRLPSFYQPPMSGIEPSWGMPSNFEIPPWN 60
           MS PYPF+Q+TPPD E R   PPLPPRY+ GR PSFY+P MS + PS  MPSNFEIP WN
Sbjct: 1   MSDPYPFHQVTPPDHEARGVWPPLPPRYTVGRFPSFYRPTMSEVVPSRVMPSNFEIPQWN 60

Query: 61  NLNIGLPDHEWRFRYPPAFND-ARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTEMKVCR 120
           N+NIGL D+E  +RY  A ND  R WLPSWRGI+FHE RLP    ++ + G+STEMKVCR
Sbjct: 61  NVNIGLHDNELEWRYALASNDHTRGWLPSWRGIDFHENRLPECPILNNRTGMSTEMKVCR 120

Query: 121 QFQRRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLEEVRSK 180
           QFQRR KCAYGDQCRFLH+IPE TKDFG S+QN+EVRAV SGHVMD +S FDQ EEVRSK
Sbjct: 121 QFQRRGKCAYGDQCRFLHKIPENTKDFGFSTQNHEVRAVASGHVMDGKSMFDQFEEVRSK 180

Query: 181 VQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSASEHGSI 240
           VQTKIVARSEIP PV+CKTR CY WQTTGHC YGE CRFAHGEAELQKLESCSASE G +
Sbjct: 181 VQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSASERGRV 240

Query: 241 GGASATTSAAATAGLRSSRGIGNDCKNKG-PRMKQFFKSKELKKLIGIYADWLEN 292
           GGASATT AAA AGLR SRGIG DCKNKG  RMKQ FKSKE KKLIGIYADWLEN
Sbjct: 241 GGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN 295

[Close]

BLAST of Tan0019703 vs. NCBI nr
Match: XP_023000378.1 (zinc finger CCCH domain-containing protein 39-like [Cucurbita maxima])

HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-117
Identity = 226/301 (75.08%), Postives = 241/301 (80.07%), Query Frame = 0


Query: 1   MSAPYPFNQITPPD-------PEVRLPPLPPRYSDGRLPSFYQPPMSGIEPSWGMPSNFE 60
           MS PYPF+Q+TP D       P +R PP PPRYS GR PSFYQP MS + PS  MPSNFE
Sbjct: 1   MSDPYPFHQVTPSDHEARGVWPPLRPPPWPPRYSIGRFPSFYQPTMSEVVPSRVMPSNFE 60

Query: 61  IPPWNNLNIGLPDHEWRFRYPPAFND-ARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTE 120
           IP WNN+NIGL D+E  +RY  A ND  R WLPSWRGIEFHE RLP    V+ + G++TE
Sbjct: 61  IPQWNNVNIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMATE 120

Query: 121 MKVCRQFQRRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLE 180
           MKVCRQFQRR KCAYGDQCRFLH+IPE TKDFG SSQN+EVRAV SGHVMDR+S FDQ E
Sbjct: 121 MKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGYSSQNHEVRAVASGHVMDRKSMFDQFE 180

Query: 181 EVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSAS 240
           EVRSKVQTKIVARSEIP PVSCKTR CY WQTTGHC YGE CRFAHGEAELQKLESCS S
Sbjct: 181 EVRSKVQTKIVARSEIPVPVSCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSPS 240

Query: 241 EHGSIGGASATTSAAATAGLRSSRGIGNDCKNKG-PRMKQFFKSKE-LKKLIGIYADWLE 292
           E G +GGASATT AAA AGLR SRGIG D KNKG  RMKQ FKSKE  KKLIGIYADWLE
Sbjct: 241 ERGRVGGASATTKAAAAAGLRCSRGIGTDGKNKGSSRMKQLFKSKEHKKKLIGIYADWLE 300

[Close]

BLAST of Tan0019703 vs. ExPASy TrEMBL
Match: A0A6J1HGS0 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111464190 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 2.0e-121
Identity = 228/300 (76.00%), Postives = 244/300 (81.33%), Query Frame = 0


Query: 1   MSAPYPFNQITPPD-------PEVRLPPLPPRYSDGRLPSFYQPPMSGIEPSWGMPSNFE 60
           MS PYPF+Q+TPPD       P +R PPLPPRY+ GR PSFYQP MS I PS  MPSNFE
Sbjct: 1   MSDPYPFHQVTPPDHEARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFE 60

Query: 61  IPPWNNLNIGLPDHEWRFRYPPAFND-ARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTE 120
           IP WNN++IGL D+E  +RY  A ND  R WLPSWRGIEFHE RLP    V+ + G+STE
Sbjct: 61  IPQWNNVHIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMSTE 120

Query: 121 MKVCRQFQRRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLE 180
           MKVCRQFQRR KCAYGDQCRFLH+IPE TKDFGSSSQN+EVRAV SGHVMD +S FDQ E
Sbjct: 121 MKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFE 180

Query: 181 EVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSAS 240
           EVRSKVQTKIVARSEIP PV+CKTR CY WQTTGHC YGE CRFAHGEAELQKLESCS S
Sbjct: 181 EVRSKVQTKIVARSEIPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTS 240

Query: 241 EHGSIGGASATTSAAATAGLRSSRGIGNDCKNKG-PRMKQFFKSKELKKLIGIYADWLEN 292
           E G +GGASATT AAA AGLR SRGIG DCKNKG  RMKQ FKSKE KKLIGIYADWLEN
Sbjct: 241 ERGRVGGASATTKAAAAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN 300

[Close]

BLAST of Tan0019703 vs. ExPASy TrEMBL
Match: A0A6J1KMG0 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita maxima OX=3661 GN=LOC111494633 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 7.8e-118
Identity = 226/301 (75.08%), Postives = 241/301 (80.07%), Query Frame = 0


Query: 1   MSAPYPFNQITPPD-------PEVRLPPLPPRYSDGRLPSFYQPPMSGIEPSWGMPSNFE 60
           MS PYPF+Q+TP D       P +R PP PPRYS GR PSFYQP MS + PS  MPSNFE
Sbjct: 1   MSDPYPFHQVTPSDHEARGVWPPLRPPPWPPRYSIGRFPSFYQPTMSEVVPSRVMPSNFE 60

Query: 61  IPPWNNLNIGLPDHEWRFRYPPAFND-ARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTE 120
           IP WNN+NIGL D+E  +RY  A ND  R WLPSWRGIEFHE RLP    V+ + G++TE
Sbjct: 61  IPQWNNVNIGLHDNELEWRYALASNDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMATE 120

Query: 121 MKVCRQFQRRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLE 180
           MKVCRQFQRR KCAYGDQCRFLH+IPE TKDFG SSQN+EVRAV SGHVMDR+S FDQ E
Sbjct: 121 MKVCRQFQRRGKCAYGDQCRFLHKIPENTKDFGYSSQNHEVRAVASGHVMDRKSMFDQFE 180

Query: 181 EVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSAS 240
           EVRSKVQTKIVARSEIP PVSCKTR CY WQTTGHC YGE CRFAHGEAELQKLESCS S
Sbjct: 181 EVRSKVQTKIVARSEIPVPVSCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSPS 240

Query: 241 EHGSIGGASATTSAAATAGLRSSRGIGNDCKNKG-PRMKQFFKSKE-LKKLIGIYADWLE 292
           E G +GGASATT AAA AGLR SRGIG D KNKG  RMKQ FKSKE  KKLIGIYADWLE
Sbjct: 241 ERGRVGGASATTKAAAAAGLRCSRGIGTDGKNKGSSRMKQLFKSKEHKKKLIGIYADWLE 300

[Close]

BLAST of Tan0019703 vs. ExPASy TrEMBL
Match: A0A0A0KBW4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433210 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 4.0e-106
Identity = 205/293 (69.97%), Postives = 224/293 (76.45%), Query Frame = 0


Query: 1   MSAPYPFNQITPPDPEVRLPPLPPRYSDGRLPSFYQPPMSGIEPSWGMPSNFEIPPWNNL 60
           MSAP  F     P+     P LPP Y D R  SFY+P MSG+  SW MPSNF IPPWNN 
Sbjct: 1   MSAPNRF----VPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNW 60

Query: 61  NIGLPDHEWRFRYPPAFNDARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTEMKVCRQFQ 120
           NIG  +HE+   Y P FND RR LPS  GIEF EG+L  R NVD     S EMKVCR FQ
Sbjct: 61  NIGY-EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVD----NSNEMKVCRLFQ 120

Query: 121 RRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLEEVRSKVQT 180
           RR+KCAYGDQCRFLHEIP+KT+D GSSSQNYEV  V  GHVMDR SGFDQLEEVRSKVQT
Sbjct: 121 RRKKCAYGDQCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQT 180

Query: 181 KIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSASEHGSIGGA 240
           K+V R EIPKP+  K+RPCYPWQTTG CPYG GCRFAHGEAELQKLE C+AS+ GS+GG 
Sbjct: 181 KVVVRGEIPKPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGV 240

Query: 241 S--ATTSAAATAGLRSSRGIGNDCKNKGPRMKQFFKSKELKKLIGIYADWLEN 292
           S  ATT+AA  AGLRSSR IG DCKNKGPR+ QFF+SKE KKLIGIYADWLE+
Sbjct: 241 SGTATTTAAVEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 284

[Close]

BLAST of Tan0019703 vs. ExPASy TrEMBL
Match: A0A1S4E329 (zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103499783 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 6.2e-99
Identity = 199/293 (67.92%), Postives = 215/293 (73.38%), Query Frame = 0


Query: 1   MSAPYPFNQITPPDPEVRLPPLPPRYSDGRLPSFYQPPMSGIEPSWGMPSNFEIPPWNNL 60
           MSAP  F     P+     P LPP Y D R  SFY+  MSG   SW MPSNF IPPWNN 
Sbjct: 1   MSAPNRF----VPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNW 60

Query: 61  NIGLPDHEWRFRYPPAFNDARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTEMKVCRQFQ 120
           NIG  +HE    Y P FND  R LPS  GIEFHEG+L  R NVD     S EMKVCR FQ
Sbjct: 61  NIGY-EHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVD----DSNEMKVCRLFQ 120

Query: 121 RRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLEEVRSKVQT 180
           RR+KCAYGDQCRFLHEIPEKT+D GSSSQNYEV          RRSGFDQLEEVRSKVQT
Sbjct: 121 RRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQT 180

Query: 181 KIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSASEHGSIGG- 240
           K+V R EIPKP+  K RPCYPWQTTG CPYG GCRFAHGEAELQKLE CSAS+ GS+GG 
Sbjct: 181 KVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCSASQRGSVGGV 240

Query: 241 -ASATTSAAATAGLRSSRGIGNDCKNKGPRMKQFFKSKELKKLIGIYADWLEN 292
            A+ATT+A   AGLRSS+ IG DCKNKGPR+ QFF+SKE KKLIGIYADWLE+
Sbjct: 241 SATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 274

[Close]

BLAST of Tan0019703 vs. ExPASy TrEMBL
Match: A0A5A7UUP3 (Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002180 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 6.2e-99
Identity = 199/293 (67.92%), Postives = 215/293 (73.38%), Query Frame = 0


Query: 1   MSAPYPFNQITPPDPEVRLPPLPPRYSDGRLPSFYQPPMSGIEPSWGMPSNFEIPPWNNL 60
           MSAP  F     P+     P LPP Y D R  SFY+  MSG   SW MPSNF IPPWNN 
Sbjct: 1   MSAPNRF----VPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNW 60

Query: 61  NIGLPDHEWRFRYPPAFNDARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTEMKVCRQFQ 120
           NIG  +HE    Y P FND  R LPS  GIEFHEG+L  R NVD     S EMKVCR FQ
Sbjct: 61  NIGY-EHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVD----DSNEMKVCRLFQ 120

Query: 121 RRRKCAYGDQCRFLHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLEEVRSKVQT 180
           RR+KCAYGDQCRFLHEIPEKT+D GSSSQNYEV          RRSGFDQLEEVRSKVQT
Sbjct: 121 RRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQT 180

Query: 181 KIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSASEHGSIGG- 240
           K+V R EIPKP+  K RPCYPWQTTG CPYG GCRFAHGEAELQKLE CSAS+ GS+GG 
Sbjct: 181 KVVVRGEIPKPLIGKPRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCSASQRGSVGGV 240

Query: 241 -ASATTSAAATAGLRSSRGIGNDCKNKGPRMKQFFKSKELKKLIGIYADWLEN 292
            A+ATT+A   AGLRSS+ IG DCKNKGPR+ QFF+SKE KKLIGIYADWLE+
Sbjct: 241 SATATTTAPVEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 274

[Close]

BLAST of Tan0019703 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-14
Identity = 62/227 (27.31%), Postives = 95/227 (41.85%), Query Frame = 0


Query: 74  PPAFNDARRWLPSWRGIEFHEGRLPGRSNVDCQAGISTEMKVCRQFQRRRKCAYGDQCRF 133
           PPA  D  R     R  E         +N +    I   MK+CR+F    +C YGD+C F
Sbjct: 147 PPAGQDRERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNF 206

Query: 134 LHEIPEKTKDFGSSSQNYEVRAVDSGHVMDRRSGFDQLEEVRSKVQTKIVA---RSEIPK 193
           +HE   K ++     +   V +V +            L EV  +    + A      + K
Sbjct: 207 IHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVK 266

Query: 194 PVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQ----KLESCSASEHGSIGGASA--TT 253
            V  KTR C  +  TG CP+G+ C FAHG+AEL     ++E  + +   S+   +     
Sbjct: 267 TVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSVGRVEGEAMNAVASVNKQAVVPAN 326

Query: 254 SAAATAGLRSSRGIGNDCKNKGPRMKQFFKSKELKKLIGIYADWLEN 292
            A A   +       +    +G R K   K  + KK+  IY DW+++
Sbjct: 327 EAFAMKPITQVTADSSGLNEEGRRKKCLLKWSDSKKINRIYGDWIDD 373

[Close]

BLAST of Tan0019703 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 63.2 bits (152), Expect = 4.1e-10
Identity = 56/229 (24.45%), Postives = 89/229 (38.86%), Query Frame = 0


Query: 94  EGRLPGRSNVDCQAGISTEMKVCRQFQRRRKCAYGDQCRFLHEIPEKTKD-----FGSSS 153
           E ++P   +   ++G S + + C++F     C YG+ C FLH+   + ++      G   
Sbjct: 156 EFQIPSLVSSTAESGRSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGG 215

Query: 154 QNYEVRAVDSGHVMDRRSGFDQLEEVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHC 213
                     G  +        +  +     +   +  +I KP + KTR C  W+ TG+C
Sbjct: 216 YGSGGGGGSGGGSVGGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYC 275

Query: 214 PYGEGCRFAHGEAELQKLESCSASEHGSIG---------------GASATTS-------- 273
           P+G  C FAHG AEL +       E G  G               G S TT+        
Sbjct: 276 PFGAKCHFAHGAAELHRFGGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPH 335

Query: 274 ---AAATAGLRSSRGIGNDCKNKGPRMKQFFKSKELKKLIGIYADWLEN 292
              A+   G+   R      +  G R  Q  K K   K+  IY DW+++
Sbjct: 336 NADASYHTGVALQRASSAVTQKPGIRTHQ--KWKGPAKISRIYGDWIDD 382

[Close]

BLAST of Tan0019703 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.7e-06
Identity = 35/113 (30.97%), Postives = 52/113 (46.02%), Query Frame = 0


Query: 190 KPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQKLESCSASEHGSIG----------G 249
           K  + KTR C  WQTTG+CP+G  C FAHG +EL             IG          G
Sbjct: 140 KSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRG 199

Query: 250 ASATTSAAATAGLRSSR-GIGNDCKNKGPRMKQFFKSKELKKLIGIYADWLEN 292
              T ++  + G+ S R       K  G R ++ +K  +  K+  +Y DW+++
Sbjct: 200 QVDTVTSLVSPGVSSQRTSSAVTQKPNGVRTQRKWKGPD--KISRVYGDWIDD 250

[Close]

BLAST of Tan0019703 vs. TAIR 10
Match: AT1G68200.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 46.2 bits (108), Expect = 5.2e-05
Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 169 DQLEEVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQ 225
           DQ EE+  +V  + + ++E+          C  WQ TG CPYG+ C+FAHG  EL+
Sbjct: 208 DQEEEIEVEVYNQGMTKTEL----------CNKWQETGTCPYGDHCQFAHGIKELR 253

[Close]

BLAST of Tan0019703 vs. TAIR 10
Match: AT1G68200.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 46.2 bits (108), Expect = 5.2e-05
Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 169 DQLEEVRSKVQTKIVARSEIPKPVSCKTRPCYPWQTTGHCPYGEGCRFAHGEAELQ 225
           DQ EE+  +V  + + ++E+          C  WQ TG CPYG+ C+FAHG  EL+
Sbjct: 207 DQEEEIEVEVYNQGMTKTEL----------CNKWQETGTCPYGDHCQFAHGIKELR 252

The following BLAST results are available for this feature:

BLAST of Tan0019703 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT81	3.0e-13	27.31	Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LQM3	5.8e-09	24.45	Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q84UQ3	5.8e-09	27.78	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX...	[more]
Q69XQ3	4.6e-06	28.57	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
Q5PP65	3.9e-05	30.97	Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Tan0019703 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025772.1	2.4e-121	76.00	Zinc finger CCCH domain-containing protein 39 [Cucurbita argyrosperma subsp. arg...	[more]
XP_022964047.1	4.1e-121	76.00	zinc finger CCCH domain-containing protein 39-like [Cucurbita moschata]	[more]
KAG6593433.1	5.4e-121	75.67	Zinc finger CCCH domain-containing protein 39, partial [Cucurbita argyrosperma s...	[more]
XP_023513806.1	7.8e-120	75.93	zinc finger CCCH domain-containing protein 39-like [Cucurbita pepo subsp. pepo]	[more]
XP_023000378.1	1.6e-117	75.08	zinc finger CCCH domain-containing protein 39-like [Cucurbita maxima]	[more]

BLAST of Tan0019703 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGS0	2.0e-121	76.00	zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KMG0	7.8e-118	75.08	zinc finger CCCH domain-containing protein 39-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A0A0KBW4	4.0e-106	69.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433210 PE=4 SV=1	[more]
A0A1S4E329	6.2e-99	67.92	zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7UUP3	6.2e-99	67.92	Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of Tan0019703 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19360.1	2.1e-14	27.31	Zinc finger (CCCH-type) family protein	[more]
AT1G32360.1	4.1e-10	24.45	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	2.7e-06	30.97	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.1	5.2e-05	39.29	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G68200.2	5.2e-05	39.29	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 110..137 e-value: 8.8E-4 score: 28.6 coord: 193..220 e-value: 7.1E-5 score: 32.2
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 114..135 e-value: 3.0E-7 score: 30.2 coord: 195..220 e-value: 8.8E-8 score: 31.9
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 110..138 score: 14.943317
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 193..221 score: 15.33766
None	No IPR available	GENE3D	4.10.1000.10		coord: 103..164 e-value: 5.5E-7 score: 31.5
None	No IPR available	GENE3D	4.10.1000.10		coord: 190..225 e-value: 8.6E-13 score: 49.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..24
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 33..289
None	No IPR available	PANTHER	PTHR12547:SF121	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39	coord: 33..289
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 191..224
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 111..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019703.1	Tan0019703.1	mRNA
Tan0019703.2	Tan0019703.2	mRNA
Tan0019703.3	Tan0019703.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding