Tan0019272 (gene) Snake gourd v1

Overview


Name	Tan0019272
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	transcription factor bHLH149-like
Location	LG08: 6761334 .. 6762557 (+)
RNA-Seq Expression	Tan0019272
Synteny	Tan0019272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCGAGAAGCAATTAAACGTGTTCGAAGGAACTCACTACGCGTGATTTCCCGTGATTGTTTTAAACCCTTCTCTCTCTCTCTCTCTTCTTCTTCTCTGTTTCTCTCTCTAAATTCACTTCAATTTCTCTCACATTTCAACCTCCAAAATCCCTCGCACATTCTCCATCTTCAAGGTATTGTTCATCTCTTTCATCTCGATTGATATATGCACTGCTTTGATTCAATTGAAATGCTGTTTCCTGATTTTATTGTGTTTTTTTTTGTTTCTTGATGATGTCGATTGTTCTTCTTCTGGATTCTGAGACTGATTCTATCGCTGGTAGACTAGTAGTTGTTGTTCGAATTGGCTTATGGATTTTGTTTCTTCGTTTTTTTGCAGACTGTAACTGATTTGTGTGGGGAAGAGACGGAATAGATAAGAGATTTGATTTTCGATTGGTTTGTTTATGGACGCGGAGGAATCGAAGAATTCGAGAAGGTTGTTGCAGCAGCCGAATAAGCGCCGGAAACTTGCTTCTGATGATTGTTCGGAAGGCAGAGAACGGAAGTGGAGGACAGAGGTCGAGCAACAGATCTACTCTTCAAAGCTCGCGGTAGCGCTCCGGCGAGTAAGTAGGCGGCAGTCCTCGTCGCAGATCAACGGACGGCTAGTTCGTGAAACTGCAGATTGCGTCCTCGCCGCCGCGGCCAAGGGGAGGACTCGGTGGAGCCGCGCGATTCTGGCGAGCCGATTCCGCCAGAGGCTCGCGAGGCGTCGGAGGACGAAGAAATTGATCGGCCGTAAACCGTCACGCGCGGCGGAGGCTAAGAACAAGAAAATTAGAAAGGTGCCGGCGGTGCAGAGGAAGGTGAAAATTCTAGGCCGGTTGGTTCCAGGTTGCCGGAAAGTCTCATTCCCGAACCTTCTGGAAGAAACGACCGATTACATATCAGCTTTGGAGATGCAGGTAAGAGCCATGGCGGCGTTGGTCGAACTCCTCGCCGGAGCTCAAAGTAATTTGCTCGGAATCTCGAACGATTCTTGAGATTGATAATCGCTTCACAGACTTGGAAATCGGAATCGCCGCCTGGTTTTTTTTCTCCAATTGAATTTTTTTTCCCGGCGGGTATATTTCTATTTGTTTTTATGTTTCCATGTATCTTATTGTATATGCTAAATTATAAATTTAGTCTCTAATTTTTTTTTACCAAATTTTAGTCTCTAAATTTCTCTCAAATGTGG

mRNA sequence

GAGCGAGAAGCAATTAAACGTGTTCGAAGGAACTCACTACGCGTGATTTCCCGTGATTGTTTTAAACCCTTCTCTCTCTCTCTCTCTTCTTCTTCTCTGTTTCTCTCTCTAAATTCACTTCAATTTCTCTCACATTTCAACCTCCAAAATCCCTCGCACATTCTCCATCTTCAAGACTGTAACTGATTTGTGTGGGGAAGAGACGGAATAGATAAGAGATTTGATTTTCGATTGGTTTGTTTATGGACGCGGAGGAATCGAAGAATTCGAGAAGGTTGTTGCAGCAGCCGAATAAGCGCCGGAAACTTGCTTCTGATGATTGTTCGGAAGGCAGAGAACGGAAGTGGAGGACAGAGGTCGAGCAACAGATCTACTCTTCAAAGCTCGCGGTAGCGCTCCGGCGAGTAAGTAGGCGGCAGTCCTCGTCGCAGATCAACGGACGGCTAGTTCGTGAAACTGCAGATTGCGTCCTCGCCGCCGCGGCCAAGGGGAGGACTCGGTGGAGCCGCGCGATTCTGGCGAGCCGATTCCGCCAGAGGCTCGCGAGGCGTCGGAGGACGAAGAAATTGATCGGCCGTAAACCGTCACGCGCGGCGGAGGCTAAGAACAAGAAAATTAGAAAGGTGCCGGCGGTGCAGAGGAAGGTGAAAATTCTAGGCCGGTTGGTTCCAGGTTGCCGGAAAGTCTCATTCCCGAACCTTCTGGAAGAAACGACCGATTACATATCAGCTTTGGAGATGCAGGTAAGAGCCATGGCGGCGTTGGTCGAACTCCTCGCCGGAGCTCAAAGTAATTTGCTCGGAATCTCGAACGATTCTTGAGATTGATAATCGCTTCACAGACTTGGAAATCGGAATCGCCGCCTGGTTTTTTTTCTCCAATTGAATTTTTTTTCCCGGCGGGTATATTTCTATTTGTTTTTATGTTTCCATGTATCTTATTGTATATGCTAAATTATAAATTTAGTCTCTAATTTTTTTTTACCAAATTTTAGTCTCTAAATTTCTCTCAAATGTGG

Coding sequence (CDS)

ATGGACGCGGAGGAATCGAAGAATTCGAGAAGGTTGTTGCAGCAGCCGAATAAGCGCCGGAAACTTGCTTCTGATGATTGTTCGGAAGGCAGAGAACGGAAGTGGAGGACAGAGGTCGAGCAACAGATCTACTCTTCAAAGCTCGCGGTAGCGCTCCGGCGAGTAAGTAGGCGGCAGTCCTCGTCGCAGATCAACGGACGGCTAGTTCGTGAAACTGCAGATTGCGTCCTCGCCGCCGCGGCCAAGGGGAGGACTCGGTGGAGCCGCGCGATTCTGGCGAGCCGATTCCGCCAGAGGCTCGCGAGGCGTCGGAGGACGAAGAAATTGATCGGCCGTAAACCGTCACGCGCGGCGGAGGCTAAGAACAAGAAAATTAGAAAGGTGCCGGCGGTGCAGAGGAAGGTGAAAATTCTAGGCCGGTTGGTTCCAGGTTGCCGGAAAGTCTCATTCCCGAACCTTCTGGAAGAAACGACCGATTACATATCAGCTTTGGAGATGCAGGTAAGAGCCATGGCGGCGTTGGTCGAACTCCTCGCCGGAGCTCAAAGTAATTTGCTCGGAATCTCGAACGATTCTTGA

Protein sequence

MDAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALRRVSRRQSSSQINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRAAEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAGAQSNLLGISNDS

Homology

[Close]

BLAST of Tan0019272 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.1e-35
Identity = 91/158 (57.59%), Postives = 112/158 (70.89%), Query Frame = 0


Query: 33  RKWRTEVEQQIYSSKLAVALRRVSRRQSSSQIN---------GRLVRETADCVLAAAAKG 92
           ++W+T   QQIY+ KL  ALRRV +R S++  N          R +R+TAD VLAA+A+G
Sbjct: 42  KRWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARG 101

Query: 93  RTRWSRAILASRFRQRLARRRRTKKLIGRKPSRAAEAKNKKIRKVPAVQRKVKILGRLVP 152
            TRWSRAILASR R +L + R+ KK  G   SR    +  +I K+PAV+RK+KILGRLVP
Sbjct: 102 TTRWSRAILASRVRAKLKKHRKAKKSTGNCKSRKGLTETNRI-KLPAVERKLKILGRLVP 161

Query: 153 GCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAGA 182
           GCRKVS PNLL+E TDYI+ALEMQVRAM AL ELL  A
Sbjct: 162 GCRKVSVPNLLDEATDYIAALEMQVRAMEALAELLTAA 198

[Close]

BLAST of Tan0019272 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.5e-26
Identity = 90/214 (42.06%), Postives = 123/214 (57.48%), Query Frame = 0


Query: 2   DAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALR--RVSRRQ 61
           +++ S+  R+    P+   K  S   S     KWR+E +QQIYS+KL  ALR  R+S++ 
Sbjct: 20  NSDRSRRKRKKKSSPSSVEKSPSPSIS---LEKWRSEKQQQIYSTKLVHALRELRISQQP 79

Query: 62  SSSQIN-----GRLVRETADCVLAAAAKGRTRWSRAILASRF--------RQRLARRRRT 121
           SSS  +     GR VRE AD  LA AA+G+T WSRAIL+           RQR++    T
Sbjct: 80  SSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTT 139

Query: 122 KKLIG--RKPSRAAEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISAL 181
               G  R   + A     K + +PAVQRKVK+L RLVPGCRK S P +LEETTDYI+A+
Sbjct: 140 TLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAM 199

Query: 182 EMQVRAMAALVELLA-----------GAQSNLLG 188
           EMQ+R M A++  ++           G Q+++LG
Sbjct: 200 EMQIRTMTAILSAVSSSPPPPTPGHEGGQTHMLG 230

[Close]

BLAST of Tan0019272 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.9e-25
Identity = 75/166 (45.18%), Postives = 101/166 (60.84%), Query Frame = 0


Query: 34  KWRTEVEQQIYSSKLAVALRRVSRRQSSS-------QINGRLVRETADCVLAAAAKGRTR 93
           +WR+E +Q+IYS+KL  AL++V    S+S       Q  G+ VRE AD  LA +A+GRT 
Sbjct: 47  RWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTL 106

Query: 94  WSRAILASRFRQRLARRRRTKKLI-------------GRKPSRAAEAKNKKIRKVPAVQR 153
           WSRAILA+R + +  ++RR +  +              R   R         + +P V R
Sbjct: 107 WSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNR 166

Query: 154 KVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLA 180
           KV++LGRLVPGC K S P +LEE TDYI ALEMQVRAM +LV+LL+
Sbjct: 167 KVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]

BLAST of Tan0019272 vs. ExPASy Swiss-Prot
Match: Q9M9L6 (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.5e-25
Identity = 78/171 (45.61%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 13  LQQPNKRRKLASDDCS-EGRERKWRTEVEQQIYSSKLAVALRRVSRRQSSSQINGRLVRE 72
           L +  +R +++S++       R+WR    Q++YS KL  AL+R SRR ++       VR+
Sbjct: 40  LMEALRRSRVSSEEAPVRHLSRRWRATTAQKVYSLKLYDALQR-SRRSAT-------VRD 99

Query: 73  TADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRAAEAKNKKIRKVPAV 132
           TAD VLA  A+G TRWSRAIL SRF   L RRR TK       +      + + RK+ AV
Sbjct: 100 TADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGRRRKLSAV 159

Query: 133 QRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAGAQ 183
             +V++LG LVPGCR+ + P LL+ET DYI+ALEMQVRAM AL ++L+  Q
Sbjct: 160 GNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQ 202

[Close]

BLAST of Tan0019272 vs. NCBI nr
Match: XP_038890546.1 (transcription factor bHLH149 [Benincasa hispida])

HSP 1 Score: 301.2 bits (770), Expect = 6.3e-78
Identity = 168/196 (85.71%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MDAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALRRVSRRQS 60
           MDAEESKNSRRLL+QPN RRK+ SD  +EGRE++WRTEVEQQIYSS+LA ALRRVSRR+S
Sbjct: 1   MDAEESKNSRRLLEQPNNRRKIVSDVTAEGREQRWRTEVEQQIYSSRLAEALRRVSRRRS 60

Query: 61  S----SQINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSR 120
           S    S INGRLVRETADCVLAA AKGRTRWSRAILASRFRQRLARRRRTKKL+G KPSR
Sbjct: 61  SSYARSPINGRLVRETADCVLAATAKGRTRWSRAILASRFRQRLARRRRTKKLLGCKPSR 120

Query: 121 AAEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVE 180
            AEAKN+KIRK+PAVQRKVKILGRLVPGCRK+SFPNLLEE TDYISALEMQV+AMAAL E
Sbjct: 121 VAEAKNEKIRKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAE 180

Query: 181 LLAGAQSNLLGISNDS 193
           LLAG QSNLLGISNDS
Sbjct: 181 LLAGTQSNLLGISNDS 196

[Close]

BLAST of Tan0019272 vs. NCBI nr
Match: XP_022937811.1 (transcription factor bHLH149-like [Cucurbita moschata])

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-76
Identity = 166/187 (88.77%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 2   DAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALRRVSRRQSS 61
           DA ESKNSRRLLQQPNKRRK+ASD C+EGRERKWRTEVEQQIYSSKL  A+R VSRR+SS
Sbjct: 8   DAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSS 67

Query: 62  SQ----INGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRA 121
           +Q    INGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSR 
Sbjct: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRM 127

Query: 122 AEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 181
           AE K++K +K+PAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL
Sbjct: 128 AETKSEKNKKLPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 187

Query: 182 LAGAQSN 185
           LAGAQSN
Sbjct: 188 LAGAQSN 194

[Close]

BLAST of Tan0019272 vs. NCBI nr
Match: XP_023537600.1 (transcription factor bHLH149-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-76
Identity = 165/187 (88.24%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 2   DAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALRRVSRRQSS 61
           DAEESKNSRRLLQQPNKRRK+ASD C+EGRERKWRTEVEQQIYSSKL  A+R+VSRR+SS
Sbjct: 8   DAEESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRQVSRRRSS 67

Query: 62  SQ----INGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRA 121
           +Q    INGRLVRETADCVLAA AKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSR 
Sbjct: 68  AQAGSPINGRLVRETADCVLAAVAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRM 127

Query: 122 AEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 181
           AE K++K +K+PAVQRKVKILGRLVPGCRK+SFPNLLEETTDYISALEMQVRAMAALVEL
Sbjct: 128 AETKSEKNKKLPAVQRKVKILGRLVPGCRKLSFPNLLEETTDYISALEMQVRAMAALVEL 187

Query: 182 LAGAQSN 185
           LAGAQSN
Sbjct: 188 LAGAQSN 194

[Close]

BLAST of Tan0019272 vs. NCBI nr
Match: KAG7021037.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 296.2 bits (757), Expect = 2.0e-76
Identity = 165/187 (88.24%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 2   DAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALRRVSRRQSS 61
           DA ESKNSRRLLQQPNKRRK+ASD C+EGRERKWRTEVEQQIYSSKL  A+R VSRR+SS
Sbjct: 8   DAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSS 67

Query: 62  SQ----INGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRA 121
           +Q    INGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSR 
Sbjct: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRM 127

Query: 122 AEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 181
           AE K++K +K+PAVQRKVKILGRL+PGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL
Sbjct: 128 AETKSEKNKKLPAVQRKVKILGRLIPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 187

Query: 182 LAGAQSN 185
           LAGAQSN
Sbjct: 188 LAGAQSN 194

[Close]

BLAST of Tan0019272 vs. NCBI nr
Match: KAG6586210.1 (Transcription factor basic helix-loop-helix 149, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295.4 bits (755), Expect = 3.5e-76
Identity = 165/187 (88.24%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 2   DAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALRRVSRRQSS 61
           DA ESKNSRRLLQQPNKRRK+ASD C+EGRERKWRTEVEQQIYSSKL  A+R VSRR+SS
Sbjct: 8   DAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSS 67

Query: 62  SQ----INGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRA 121
           +Q    INGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSR 
Sbjct: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRM 127

Query: 122 AEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 181
           AE K++K +K+P+VQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL
Sbjct: 128 AETKSEKNKKLPSVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 187

Query: 182 LAGAQSN 185
           LAGAQSN
Sbjct: 188 LAGAQSN 194

[Close]

BLAST of Tan0019272 vs. ExPASy TrEMBL
Match: A0A6J1FBF1 (transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111444091 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 7.5e-77
Identity = 166/187 (88.77%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 2   DAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALRRVSRRQSS 61
           DA ESKNSRRLLQQPNKRRK+ASD C+EGRERKWRTEVEQQIYSSKL  A+R VSRR+SS
Sbjct: 8   DAAESKNSRRLLQQPNKRRKIASDVCAEGRERKWRTEVEQQIYSSKLVEAIRHVSRRRSS 67

Query: 62  SQ----INGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRA 121
           +Q    INGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSR 
Sbjct: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRM 127

Query: 122 AEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 181
           AE K++K +K+PAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL
Sbjct: 128 AETKSEKNKKLPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 187

Query: 182 LAGAQSN 185
           LAGAQSN
Sbjct: 188 LAGAQSN 194

[Close]

BLAST of Tan0019272 vs. ExPASy TrEMBL
Match: A0A6J1HQH2 (transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111465681 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.2e-74
Identity = 163/187 (87.17%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 2   DAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALRRVSRRQSS 61
           DAEESKNSRRLLQ+PNKRRK+A D  ++GRERKWRTEVEQQIYSSKL  A+R+VSRR+SS
Sbjct: 8   DAEESKNSRRLLQKPNKRRKIAFDVGAKGRERKWRTEVEQQIYSSKLVEAIRQVSRRRSS 67

Query: 62  SQ----INGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRA 121
           +Q    INGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSR 
Sbjct: 68  AQAGSPINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSRI 127

Query: 122 AEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 181
           AE K++K +K+PAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL
Sbjct: 128 AETKSEKNKKLPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 187

Query: 182 LAGAQSN 185
           LAGAQSN
Sbjct: 188 LAGAQSN 194

[Close]

BLAST of Tan0019272 vs. ExPASy TrEMBL
Match: A0A6J1KCR3 (transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111493732 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.9e-72
Identity = 161/196 (82.14%), Postives = 176/196 (89.80%), Query Frame = 0


Query: 1   MDAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALRRVSRRQS 60
           MDAEESKNSRR LQ+PNKR ++AS+  +EGRER+WRTEVEQQIYSS+LA AL+RVSR++S
Sbjct: 1   MDAEESKNSRRSLQKPNKRLQIASNVSAEGRERRWRTEVEQQIYSSRLAEALQRVSRQRS 60

Query: 61  S----SQINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSR 120
           S    S INGRLVRETADCVLAAAAKGRTRWSRAILA+RFRQRLARRRRTKK IGRKPSR
Sbjct: 61  SPHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPSR 120

Query: 121 AAEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVE 180
             E KN   RK+PAVQRKVKILGRLVPGCRK+SFPNLLEE TDYISALEMQV+AMAAL E
Sbjct: 121 VEEVKN---RKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAE 180

Query: 181 LLAGAQSNLLGISNDS 193
           +LAGAQSNLL ISNDS
Sbjct: 181 ILAGAQSNLLPISNDS 193

[Close]

BLAST of Tan0019272 vs. ExPASy TrEMBL
Match: A0A6J1G430 (transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111450552 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.3e-72
Identity = 160/196 (81.63%), Postives = 174/196 (88.78%), Query Frame = 0


Query: 1   MDAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALRRVSRRQS 60
           MDAEESKNS+R LQ+PNKRR++ASD  +EGRER+WRTEVEQQIYSS+LA AL+RV R  S
Sbjct: 1   MDAEESKNSKRSLQKPNKRRQIASDVSAEGRERRWRTEVEQQIYSSRLAEALQRVGRLPS 60

Query: 61  S----SQINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLARRRRTKKLIGRKPSR 120
           S    S INGRLVRETADCVLAAAAKGRTRWSRAILA+RFRQRLARRRRTKK IGRKPSR
Sbjct: 61  SPHARSTINGRLVRETADCVLAAAAKGRTRWSRAILANRFRQRLARRRRTKKSIGRKPSR 120

Query: 121 AAEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVE 180
            AE KN   RK+PAVQRKV+ILGRLVPGCRK+SFPNLLEE TDYISALEMQV+AMAAL E
Sbjct: 121 VAEVKN---RKLPAVQRKVRILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMAALAE 180

Query: 181 LLAGAQSNLLGISNDS 193
           +LAGAQ NLL ISNDS
Sbjct: 181 ILAGAQRNLLPISNDS 193

[Close]

BLAST of Tan0019272 vs. ExPASy TrEMBL
Match: A0A5A7TYM9 (Transcription factor bHLH149-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001010 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 9.6e-56
Identity = 135/195 (69.23%), Postives = 156/195 (80.00%), Query Frame = 0


Query: 1   MDAEESKNSRRLLQQPNKRR--KLASDDCSEGRERKWRTEVEQQIYSSKLAVALRRVSRR 60
           MDA++S NS  LL  P  +R  K+ +D   E  +  W+TE++QQIYSS+LA ALRRV+  
Sbjct: 1   MDADQSNNSTTLLPHPANKRPPKIITD---EPTQHTWKTEIQQQIYSSRLAEALRRVTHP 60

Query: 61  QSSSQINGRLVRETADCVLAAAAKGRTRWSRAILASRFRQRLA-RRRRTKKLIGRKPSRA 120
           +SSS ING LVR+TAD VLAA AKGR+RWSRAILA+RFRQ LA RRRRTKKL+ RKP   
Sbjct: 61  RSSSTINGNLVRQTADSVLAATAKGRSRWSRAILATRFRQSLARRRRRTKKLLARKP--- 120

Query: 121 AEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVEL 180
            E KN+K RK+PAVQRKVKILGRLVPGCRK+SFPNLLEE TDYISALEMQV+AM AL EL
Sbjct: 121 -ELKNEKARKLPAVQRKVKILGRLVPGCRKLSFPNLLEEATDYISALEMQVKAMTALAEL 180

Query: 181 LAGAQSNLLGISNDS 193
           LAG Q N+ GISNDS
Sbjct: 181 LAGNQRNIAGISNDS 188

[Close]

BLAST of Tan0019272 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 149.8 bits (377), Expect = 2.2e-36
Identity = 91/158 (57.59%), Postives = 112/158 (70.89%), Query Frame = 0


Query: 33  RKWRTEVEQQIYSSKLAVALRRVSRRQSSSQIN---------GRLVRETADCVLAAAAKG 92
           ++W+T   QQIY+ KL  ALRRV +R S++  N          R +R+TAD VLAA+A+G
Sbjct: 42  KRWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARG 101

Query: 93  RTRWSRAILASRFRQRLARRRRTKKLIGRKPSRAAEAKNKKIRKVPAVQRKVKILGRLVP 152
            TRWSRAILASR R +L + R+ KK  G   SR    +  +I K+PAV+RK+KILGRLVP
Sbjct: 102 TTRWSRAILASRVRAKLKKHRKAKKSTGNCKSRKGLTETNRI-KLPAVERKLKILGRLVP 161

Query: 153 GCRKVSFPNLLEETTDYISALEMQVRAMAALVELLAGA 182
           GCRKVS PNLL+E TDYI+ALEMQVRAM AL ELL  A
Sbjct: 162 GCRKVSVPNLLDEATDYIAALEMQVRAMEALAELLTAA 198

[Close]

BLAST of Tan0019272 vs. TAIR 10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 119.4 bits (298), Expect = 3.2e-27
Identity = 90/214 (42.06%), Postives = 123/214 (57.48%), Query Frame = 0


Query: 2   DAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALR--RVSRRQ 61
           +++ S+  R+    P+   K  S   S     KWR+E +QQIYS+KL  ALR  R+S++ 
Sbjct: 20  NSDRSRRKRKKKSSPSSVEKSPSPSIS---LEKWRSEKQQQIYSTKLVHALRELRISQQP 79

Query: 62  SSSQIN-----GRLVRETADCVLAAAAKGRTRWSRAILASRF--------RQRLARRRRT 121
           SSS  +     GR VRE AD  LA AA+G+T WSRAIL+           RQR++    T
Sbjct: 80  SSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTT 139

Query: 122 KKLIG--RKPSRAAEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISAL 181
               G  R   + A     K + +PAVQRKVK+L RLVPGCRK S P +LEETTDYI+A+
Sbjct: 140 TLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAM 199

Query: 182 EMQVRAMAALVELLA-----------GAQSNLLG 188
           EMQ+R M A++  ++           G Q+++LG
Sbjct: 200 EMQIRTMTAILSAVSSSPPPPTPGHEGGQTHMLG 230

[Close]

BLAST of Tan0019272 vs. TAIR 10
Match: AT3G17100.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 119.4 bits (298), Expect = 3.2e-27
Identity = 90/214 (42.06%), Postives = 123/214 (57.48%), Query Frame = 0


Query: 2   DAEESKNSRRLLQQPNKRRKLASDDCSEGRERKWRTEVEQQIYSSKLAVALR--RVSRRQ 61
           +++ S+  R+    P+   K  S   S     KWR+E +QQIYS+KL  ALR  R+S++ 
Sbjct: 20  NSDRSRRKRKKKSSPSSVEKSPSPSIS---LEKWRSEKQQQIYSTKLVHALRELRISQQP 79

Query: 62  SSSQIN-----GRLVRETADCVLAAAAKGRTRWSRAILASRF--------RQRLARRRRT 121
           SSS  +     GR VRE AD  LA AA+G+T WSRAIL+           RQR++    T
Sbjct: 80  SSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTT 139

Query: 122 KKLIG--RKPSRAAEAKNKKIRKVPAVQRKVKILGRLVPGCRKVSFPNLLEETTDYISAL 181
               G  R   + A     K + +PAVQRKVK+L RLVPGCRK S P +LEETTDYI+A+
Sbjct: 140 TLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAM 199

Query: 182 EMQVRAMAALVELLA-----------GAQSNLLG 188
           EMQ+R M A++  ++           G Q+++LG
Sbjct: 200 EMQIRTMTAILSAVSSSPPPPTPGHEGGQTHMLG 230

[Close]

BLAST of Tan0019272 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 3.5e-26
Identity = 75/166 (45.18%), Postives = 101/166 (60.84%), Query Frame = 0


Query: 34  KWRTEVEQQIYSSKLAVALRRVSRRQSSS-------QINGRLVRETADCVLAAAAKGRTR 93
           +WR+E +Q+IYS+KL  AL++V    S+S       Q  G+ VRE AD  LA +A+GRT 
Sbjct: 47  RWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTL 106

Query: 94  WSRAILASRFRQRLARRRRTKKLI-------------GRKPSRAAEAKNKKIRKVPAVQR 153
           WSRAILA+R + +  ++RR +  +              R   R         + +P V R
Sbjct: 107 WSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNR 166

Query: 154 KVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLA 180
           KV++LGRLVPGC K S P +LEE TDYI ALEMQVRAM +LV+LL+
Sbjct: 167 KVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]

BLAST of Tan0019272 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 3.5e-26
Identity = 75/166 (45.18%), Postives = 101/166 (60.84%), Query Frame = 0


Query: 34  KWRTEVEQQIYSSKLAVALRRVSRRQSSS-------QINGRLVRETADCVLAAAAKGRTR 93
           +WR+E +Q+IYS+KL  AL++V    S+S       Q  G+ VRE AD  LA +A+GRT 
Sbjct: 47  RWRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTL 106

Query: 94  WSRAILASRFRQRLARRRRTKKLI-------------GRKPSRAAEAKNKKIRKVPAVQR 153
           WSRAILA+R + +  ++RR +  +              R   R         + +P V R
Sbjct: 107 WSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNR 166

Query: 154 KVKILGRLVPGCRKVSFPNLLEETTDYISALEMQVRAMAALVELLA 180
           KV++LGRLVPGC K S P +LEE TDYI ALEMQVRAM +LV+LL+
Sbjct: 167 KVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

The following BLAST results are available for this feature:

BLAST of Tan0019272 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80482	3.1e-35	57.59	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
Q9LSN7	4.5e-26	42.06	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
Q9C8Z9	4.9e-25	45.18	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
Q9M9L6	6.5e-25	45.61	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]

BLAST of Tan0019272 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890546.1	6.3e-78	85.71	transcription factor bHLH149 [Benincasa hispida]	[more]
XP_022937811.1	1.6e-76	88.77	transcription factor bHLH149-like [Cucurbita moschata]	[more]
XP_023537600.1	1.6e-76	88.24	transcription factor bHLH149-like [Cucurbita pepo subsp. pepo]	[more]
KAG7021037.1	2.0e-76	88.24	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6586210.1	3.5e-76	88.24	Transcription factor basic helix-loop-helix 149, partial [Cucurbita argyrosperma...	[more]

BLAST of Tan0019272 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBF1	7.5e-77	88.77	transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111444091 ...	[more]
A0A6J1HQH2	1.2e-74	87.17	transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111465681 PE...	[more]
A0A6J1KCR3	1.9e-72	82.14	transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111493732 PE...	[more]
A0A6J1G430	4.3e-72	81.63	transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111450552 ...	[more]
A0A5A7TYM9	9.6e-56	69.23	Transcription factor bHLH149-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Tan0019272 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09250.1	2.2e-36	57.59	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G17100.1	3.2e-27	42.06	sequence-specific DNA binding transcription factors	[more]
AT3G17100.2	3.2e-27	42.06	sequence-specific DNA binding transcription factors	[more]
AT3G06590.1	3.5e-26	45.18	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	3.5e-26	45.18	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR33124:SF69	TRANSCRIPTION FACTOR BHLH149	coord: 11..186
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 11..186
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 115..164 score: 8.593963
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 129..175 e-value: 1.11863E-15 score: 66.1068
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 132..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0019272.1	Tan0019272.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding