Tan0019029 (gene) Snake gourd v1

Overview
NameTan0019029
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionvegetative cell wall protein gp1-like
LocationLG03: 73781973 .. 73783698 (+)
RNA-Seq ExpressionTan0019029
SyntenyTan0019029
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCCCTGAGATACTCTGTTTTGAAAAGAAACTTGTTTCCTTTTTCTTTCCGGTAAAGACGATGGGATTCTCTGGGGTTCGATTTGTTGTGATTTTTGCTTTGTTGACGGCGTCGTGTATGGCTCAGGCTCCGGCGCCAGCGCCGGCCCAGGGTCCTTCACAGCCTCTACCTCCGACACCAGCCACGCCGGCGCCTTCGCCGGTCGTTTTCTCTCCAGCCCCGACTCCGGCTCAAAACAGAGCACCATCACCATCACCGGCTCCGGCATCGCCCTCACCCGCTCCAGAAGCTCCGTCCCCGGCACCGGCGACACCTGCTCCATCTCCGGCGACTAGTGCGCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTGGGTCTCCCACTGGTGGTCCTGTAGTTCCACCCATCGCTTCTCCTCCTTCACCCACCGGAGGCGAGGTGCCTTCACCGGCGCCCCAAGGACCGCCGGCTGACAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCGGCTACATTCGGGATCGCTCTGGCTGGATCTCTGTTCGCAGTGGTACTCTTAGCGTAGAGCTGATGGAATTCTTTTGCTTTTACGAAATTCAATTATGTGTTTTGTTAGTGTGTTGGACATGATTAAGAGAGTTGTTTTTGTAATTTTGGTAGTCATGATTATTTGAGGATTCATTGTTCTTCTGTCGATCACATTTATGCCCATTTTATTTCGTAGAGATACGAATCCTTTGTACATCGAATTAGAGATGAATAAGAGATTTTAATCTTCATTCTTTTAAGTTGGAATCTTTTTCTCTGTGTCGTGTTTATGAACAGTAGTGATGACTTTTGAAGAAGGGGATGACGGTGTAATAGTGATGACTTTTGAATAACTTGTCCAACCATTGACGTGTGCTTCCCAGGAAAAAGGTGATTTTACATCGTCTTTACACTTTTTACTTGCACATTTGTTTTTATTTTAGTTTAAATATTAAATTTGATTTCTATCAGTCGTCCTCTAGTTTCATAAGACACTTCTAAATAGTTTATATGATATGAACTATAGAAGACCCTTCTAAATAGTTTATATGATATGAACTATAAAGGTATGAAATTGATTTTATTTCAGAAAAAGTATAAAAGTAGATTAATATAGTCCCAATAAAAACAGAGATTCAAGACAGTGAAAAATTAGGGGAAGAAAAACCCCCCAAGAGTTGGAAAAAGAAGCTAAAAGGAAATTTAGGAATTAAAGAATAAAAGAACGATTTCGATTTTTATATTTTATAAAAAATTAAAAAGAAGAAAGCGAAATCTCCCAATTGGGGCTGGCCCAAATAAATTTGTTACGGGCCTAAATGAGGCCAACATATACCCTTGGTAGCATTTACACTTTATCTATATTGTCTTGTGTACTACGGCCGTACTATATTCTCTCTGTTTGGGAACCCCACATAATTTACAAACAGATGTTGTGGCAAGCAATAAATGAGAGTAATATGAAATTTTTTCATGCTACCGTAGTACTATGAGGCACCATAAGAATGGATAATGTGGCTAGGAGTTAGGTGCAACATGTGCATCTTTTAGAGGGTCTCGACACGACCGTGCAACACTTGTTCTCGTCCACGAGCAAGTTAGCCAACTCTGATTTGGATCGCCGGTGGCCCACAAGGCCTATCTCGCAACCTCTACCACCATTCTTAGAAAACAATTTTAGAAAACAGGGTTAGAG

mRNA sequence

TTTCCCTGAGATACTCTGTTTTGAAAAGAAACTTGTTTCCTTTTTCTTTCCGGTAAAGACGATGGGATTCTCTGGGGTTCGATTTGTTGTGATTTTTGCTTTGTTGACGGCGTCGTGTATGGCTCAGGCTCCGGCGCCAGCGCCGGCCCAGGGTCCTTCACAGCCTCTACCTCCGACACCAGCCACGCCGGCGCCTTCGCCGGTCGTTTTCTCTCCAGCCCCGACTCCGGCTCAAAACAGAGCACCATCACCATCACCGGCTCCGGCATCGCCCTCACCCGCTCCAGAAGCTCCGTCCCCGGCACCGGCGACACCTGCTCCATCTCCGGCGACTAGTGCGCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTGGGTCTCCCACTGGTGGTCCTGTAGTTCCACCCATCGCTTCTCCTCCTTCACCCACCGGAGGCGAGGTGCCTTCACCGGCGCCCCAAGGACCGCCGGCTGACAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCGGCTACATTCGGGATCGCTCTGGCTGGATCTCTGTTCGCAGTGGTACTCTTAGCGTAGAGCTGATGGAATTCTTTTGCTTTTACGAAATTCAATTATGTGTTTTGTTAGTGTGTTGGACATGATTAAGAGAGTTGTTTTTGTAATTTTGGTAGTCATGATTATTTGAGGATTCATTGTTCTTCTGTCGATCACATTTATGCCCATTTTATTTCGTAGAGATACGAATCCTTTGTACATCGAATTAGAGATGAATAAGAGATTTTAATCTTCATTCTTTTAAGTTGGAATCTTTTTCTCTGTGTCGTGTTTATGAACAGTAGTGATGACTTTTGAAGAAGGGGATGACGGTGTAATAGTGATGACTTTTGAATAACTTGTCCAACCATTGACGTGTGCTTCCCAGGAAAAAGGTGATTTTACATCGTCTTTACACTTTTTACTTGCACATTTGTTTTTATTTTAGTTTAAATATTAAATTTGATTTCTATCAGTCGTCCTCTAGTTTCATAAGACACTTCTAAATAGTTTATATGATATGAACTATAGAAGACCCTTCTAAATAGTTTATATGATATGAACTATAAAGGTATGAAATTGATTTTATTTCAGAAAAAGTATAAAAGTAGATTAATATAGTCCCAATAAAAACAGAGATTCAAGACAGTGAAAAATTAGGGGAAGAAAAACCCCCCAAGAGTTGGAAAAAGAAGCTAAAAGGAAATTTAGGAATTAAAGAATAAAAGAACGATTTCGATTTTTATATTTTATAAAAAATTAAAAAGAAGAAAGCGAAATCTCCCAATTGGGGCTGGCCCAAATAAATTTGTTACGGGCCTAAATGAGGCCAACATATACCCTTGGTAGCATTTACACTTTATCTATATTGTCTTGTGTACTACGGCCGTACTATATTCTCTCTGTTTGGGAACCCCACATAATTTACAAACAGATGTTGTGGCAAGCAATAAATGAGAGTAATATGAAATTTTTTCATGCTACCGTAGTACTATGAGGCACCATAAGAATGGATAATGTGGCTAGGAGTTAGGTGCAACATGTGCATCTTTTAGAGGGTCTCGACACGACCGTGCAACACTTGTTCTCGTCCACGAGCAAGTTAGCCAACTCTGATTTGGATCGCCGGTGGCCCACAAGGCCTATCTCGCAACCTCTACCACCATTCTTAGAAAACAATTTTAGAAAACAGGGTTAGAG

Coding sequence (CDS)

ATGGGATTCTCTGGGGTTCGATTTGTTGTGATTTTTGCTTTGTTGACGGCGTCGTGTATGGCTCAGGCTCCGGCGCCAGCGCCGGCCCAGGGTCCTTCACAGCCTCTACCTCCGACACCAGCCACGCCGGCGCCTTCGCCGGTCGTTTTCTCTCCAGCCCCGACTCCGGCTCAAAACAGAGCACCATCACCATCACCGGCTCCGGCATCGCCCTCACCCGCTCCAGAAGCTCCGTCCCCGGCACCGGCGACACCTGCTCCATCTCCGGCGACTAGTGCGCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTGGGTCTCCCACTGGTGGTCCTGTAGTTCCACCCATCGCTTCTCCTCCTTCACCCACCGGAGGCGAGGTGCCTTCACCGGCGCCCCAAGGACCGCCGGCTGACAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCGGCTACATTCGGGATCGCTCTGGCTGGATCTCTGTTCGCAGTGGTACTCTTAGCGTAG

Protein sequence

MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSSSPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVLLA
Homology
BLAST of Tan0019029 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05
Identity = 60/119 (50.42%), Postives = 73/119 (61.34%), Query Frame = 0

Query: 23  APAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPS-PAPEAPSPA 82
           +PAP P+  P  P PP+PA P+P P   SPAP    + AP PSPAP SP+ P+P  PSPA
Sbjct: 47  SPAP-PSPAPPSPAPPSPAPPSPGPP--SPAPPSPPSPAP-PSPAPPSPAPPSPAPPSPA 106

Query: 83  PATPAPSPATSAPTPAPSSSPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNP 141
           P +PAP P+ + P+PAP S P+P  P+  P  PP  SPPSP     PSPAP  P    P
Sbjct: 107 PPSPAP-PSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVP 160

BLAST of Tan0019029 vs. NCBI nr
Match: XP_038881138.1 (vegetative cell wall protein gp1-like [Benincasa hispida])

HSP 1 Score: 202.6 bits (514), Expect = 2.7e-48
Identity = 137/166 (82.53%), Postives = 145/166 (87.35%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNR 60
           MGFSGVR+VVIFALLT  CMAQAPAPAP  G SQPLPP P TPAPSPVVF P+PTP  NR
Sbjct: 1   MGFSGVRYVVIFALLTRLCMAQAPAPAP--GSSQPLPPLPTTPAPSPVVFPPSPTPTPNR 60

Query: 61  APSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSSSPTPGSPTGGPVVPPIASPP 120
           APS SPAPASPSPAPEAPSPAPA PAP+PAT+APTPAPSSS T   P+GGPVVPPIASPP
Sbjct: 61  APSLSPAPASPSPAPEAPSPAPAVPAPAPATTAPTPAPSSSLT---PSGGPVVPPIASPP 120

Query: 121 SPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL 167
           SPTG EVPS APQ P ADNPAGAASHIGGAA FGIA+AG+LFAV+L
Sbjct: 121 SPTGIEVPSSAPQAPAADNPAGAASHIGGAA-FGIAVAGTLFAVIL 160

BLAST of Tan0019029 vs. NCBI nr
Match: KAA0036330.1 (hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa] >TYK12724.1 hypothetical protein E5676_scaffold255G003120 [Cucumis melo var. makuwa])

HSP 1 Score: 200.7 bits (509), Expect = 1.0e-47
Identity = 132/166 (79.52%), Postives = 139/166 (83.73%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNR 60
           MGFSGVRFVVIFALLT  CMAQAP PAP  G  QPL P  ATPAPSPVV  P+PTP  NR
Sbjct: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAP--GSPQPLTPPSATPAPSPVVLPPSPTPTPNR 60

Query: 61  APSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSSSPTPGSPTGGPVVPPIASPP 120
           APSPSP P SPSPAP+APSPAP  PAP+PA  APTP P S+PT   P+GGPVVPPIASPP
Sbjct: 61  APSPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPT---PSGGPVVPPIASPP 120

Query: 121 SPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL 167
           SPTG EVPSPAPQGPPADNPAGAASHIGGAAT GIALAG+LFAV+L
Sbjct: 121 SPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVIL 161

BLAST of Tan0019029 vs. NCBI nr
Match: XP_023544207.1 (vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-36
Identity = 123/178 (69.10%), Postives = 136/178 (76.40%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTASCMAQAPA--PAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQ 60
           MGFSGVR VVIFAL+ A CMAQAPA  PAPA    +P+PPTPATPAPSPV F PAP+ + 
Sbjct: 1   MGFSGVRLVVIFALM-ALCMAQAPAPTPAPAHDSPKPMPPTPATPAPSPVAFPPAPSRSP 60

Query: 61  NRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSPATSAPTPAPSSSPTP-GSPT 120
            RAPSPSP  ASPSPA EAPSPAP+          P PSPATSAPTPAPSS P P GSP 
Sbjct: 61  IRAPSPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPIPSGSPA 120

Query: 121 GGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL 167
           G PVVPPIASPPSP+  E PSP P+ P AD+PAGAASHIGGA T GIA+AG+L A+V+
Sbjct: 121 GAPVVPPIASPPSPS-TEGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVV 176

BLAST of Tan0019029 vs. NCBI nr
Match: XP_022950235.1 (vegetative cell wall protein gp1-like [Cucurbita moschata])

HSP 1 Score: 156.0 bits (393), Expect = 2.9e-34
Identity = 119/178 (66.85%), Postives = 134/178 (75.28%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTASCMAQAPA--PAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQ 60
           MG SGVR VVIFAL+ A C AQAPA  PAPA    +P+PPTPATPAPSPV F P+P+ + 
Sbjct: 1   MGSSGVRLVVIFALM-ALCTAQAPAPTPAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSP 60

Query: 61  NRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSPATSAPTPAPSSSPTP-GSPT 120
            RAPSPSP  ASPSPA EAPSPAP+          P PSPATSAPTPAPSS P P GSP 
Sbjct: 61  IRAPSPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPVPSGSPA 120

Query: 121 GGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL 167
           G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA T GIA+AG+L A+V+
Sbjct: 121 GAPVVPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVV 176

BLAST of Tan0019029 vs. NCBI nr
Match: XP_022978568.1 (vegetative cell wall protein gp1-like [Cucurbita maxima])

HSP 1 Score: 155.2 bits (391), Expect = 4.9e-34
Identity = 118/176 (67.05%), Postives = 133/176 (75.57%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNR 60
           MGFSGVR VVIFAL+ A C AQ  APAPA    +P+PPTPATPAPSPV F P+P+ +  R
Sbjct: 1   MGFSGVRLVVIFALM-ALCTAQ--APAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSPIR 60

Query: 61  APSPSPAPASPSPAPEAPSPAPA---------TPAPSPATSAPTPAPSSSPTP-GSPTGG 120
           APSPSP  ASPSPA EAPSPAP+          P PSPATSAPTPAPSS P P GSP G 
Sbjct: 61  APSPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPIPSGSPAGA 120

Query: 121 PVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL 167
           PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA T GIA+AG+L A+V+
Sbjct: 121 PVVPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVV 172

BLAST of Tan0019029 vs. ExPASy TrEMBL
Match: A0A5D3CNQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003120 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.9e-48
Identity = 132/166 (79.52%), Postives = 139/166 (83.73%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNR 60
           MGFSGVRFVVIFALLT  CMAQAP PAP  G  QPL P  ATPAPSPVV  P+PTP  NR
Sbjct: 1   MGFSGVRFVVIFALLTRLCMAQAPVPAP--GSPQPLTPPSATPAPSPVVLPPSPTPTPNR 60

Query: 61  APSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSSSPTPGSPTGGPVVPPIASPP 120
           APSPSP P SPSPAP+APSPAP  PAP+PA  APTP P S+PT   P+GGPVVPPIASPP
Sbjct: 61  APSPSPTPVSPSPAPDAPSPAPVVPAPAPAPIAPTPTPISTPT---PSGGPVVPPIASPP 120

Query: 121 SPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL 167
           SPTG EVPSPAPQGPPADNPAGAASHIGGAAT GIALAG+LFAV+L
Sbjct: 121 SPTGIEVPSPAPQGPPADNPAGAASHIGGAATLGIALAGTLFAVIL 161

BLAST of Tan0019029 vs. ExPASy TrEMBL
Match: A0A0A0KG74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499150 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 9.0e-42
Identity = 123/166 (74.10%), Postives = 131/166 (78.92%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNR 60
           MGFSGVRFV+IFALLT  CMAQAPAPAP  G  QPL P  ATPAPSPVV  P+PTP  NR
Sbjct: 1   MGFSGVRFVLIFALLTRLCMAQAPAPAP--GSPQPLTPPSATPAPSPVVLPPSPTPTPNR 60

Query: 61  APSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSSSPTPGSPTGGPVVPPIASPP 120
           APSPSP P SPSPAP+A SPA       PA  APTP P S+PT   P+GGPV+PPIASPP
Sbjct: 61  APSPSPTPVSPSPAPDAASPA-------PAPIAPTPTPISTPT---PSGGPVLPPIASPP 120

Query: 121 SPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL 167
           SPTG EVPSPAPQGP ADNPAGA SHIGGAAT GIALAG+LF V+L
Sbjct: 121 SPTGMEVPSPAPQGPAADNPAGAGSHIGGAATLGIALAGTLFGVIL 154

BLAST of Tan0019029 vs. ExPASy TrEMBL
Match: A0A6J1GF55 (vegetative cell wall protein gp1-like OS=Cucurbita moschata OX=3662 GN=LOC111453383 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.4e-34
Identity = 119/178 (66.85%), Postives = 134/178 (75.28%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTASCMAQAPA--PAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQ 60
           MG SGVR VVIFAL+ A C AQAPA  PAPA    +P+PPTPATPAPSPV F P+P+ + 
Sbjct: 1   MGSSGVRLVVIFALM-ALCTAQAPAPTPAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSP 60

Query: 61  NRAPSPSPAPASPSPAPEAPSPAPA---------TPAPSPATSAPTPAPSSSPTP-GSPT 120
            RAPSPSP  ASPSPA EAPSPAP+          P PSPATSAPTPAPSS P P GSP 
Sbjct: 61  IRAPSPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPVPSGSPA 120

Query: 121 GGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL 167
           G PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA T GIA+AG+L A+V+
Sbjct: 121 GAPVVPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVV 176

BLAST of Tan0019029 vs. ExPASy TrEMBL
Match: A0A6J1ITI1 (vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC111478507 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.4e-34
Identity = 118/176 (67.05%), Postives = 133/176 (75.57%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNR 60
           MGFSGVR VVIFAL+ A C AQ  APAPA    +P+PPTPATPAPSPV F P+P+ +  R
Sbjct: 1   MGFSGVRLVVIFALM-ALCTAQ--APAPAHDSPKPMPPTPATPAPSPVAFPPSPSRSPIR 60

Query: 61  APSPSPAPASPSPAPEAPSPAPA---------TPAPSPATSAPTPAPSSSPTP-GSPTGG 120
           APSPSP  ASPSPA EAPSPAP+          P PSPATSAPTPAPSS P P GSP G 
Sbjct: 61  APSPSPTSASPSPATEAPSPAPSAHAPAPETKAPTPSPATSAPTPAPSSRPIPSGSPAGA 120

Query: 121 PVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVL 167
           PVVPPIASPPSP+  + PSP P+ P AD+PAGAASHIGGA T GIA+AG+L A+V+
Sbjct: 121 PVVPPIASPPSPS-TDGPSPMPEAPAADSPAGAASHIGGATTLGIAIAGTLLAMVV 172

BLAST of Tan0019029 vs. ExPASy TrEMBL
Match: A0A6J1KP28 (classical arabinogalactan protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497414 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 7.2e-23
Identity = 94/172 (54.65%), Postives = 106/172 (61.63%), Query Frame = 0

Query: 1   MGFSGVRFVVIFALLTASCMAQA----PAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTP 60
           MGFSGVRF+++ ALL A+CMAQA    PAPAP QGPSQPLPP PATPA            
Sbjct: 1   MGFSGVRFIMVLALLAATCMAQAPAPVPAPAPTQGPSQPLPPAPATPA------------ 60

Query: 61  AQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSSSPTPGSPTGGPVVPPI 120
                  PS +PASP+PAPE              TS PTPAP +    GSP GGPVVP +
Sbjct: 61  -------PSSSPASPTPAPE--------------TSTPTPAPIT--PSGSPAGGPVVPRV 120

Query: 121 ASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVLLA 169
           ASP        PS AP+GPPADNP GAAS IG A T G+A+AGSL AV+L A
Sbjct: 121 ASP--------PSSAPEGPPADNPTGAASQIGRAGTLGMAVAGSLLAVMLAA 129

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FPQ61.0e-0550.42Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=... [more]
Match NameE-valueIdentityDescription
XP_038881138.12.7e-4882.53vegetative cell wall protein gp1-like [Benincasa hispida][more]
KAA0036330.11.0e-4779.52hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa] >TYK1272... [more]
XP_023544207.11.8e-3669.10vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo][more]
XP_022950235.12.9e-3466.85vegetative cell wall protein gp1-like [Cucurbita moschata][more]
XP_022978568.14.9e-3467.05vegetative cell wall protein gp1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A5D3CNQ64.9e-4879.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KG749.0e-4274.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499150 PE=4 SV=1[more]
A0A6J1GF551.4e-3466.85vegetative cell wall protein gp1-like OS=Cucurbita moschata OX=3662 GN=LOC111453... [more]
A0A6J1ITI12.4e-3467.05vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC11147850... [more]
A0A6J1KP287.2e-2354.65classical arabinogalactan protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 41..57
score: 41.18
coord: 78..103
score: 43.08
coord: 17..38
score: 29.09
coord: 58..75
score: 30.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..146
NoneNo IPR availablePANTHERPTHR36321:SF6CLASSICAL ARABINOGALACTAN PROTEIN 2coord: 72..166
coord: 1..90
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 5.0
IPR044959Classical arabinogalactan proteinPANTHERPTHR36321CLASSICAL ARABINOGALACTAN PROTEIN 9coord: 72..166
coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0019029.1Tan0019029.1mRNA