Tan0019029 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCCCTGAGATACTCTGTTTTGAAAAGAAACTTGTTTCCTTTTTCTTTCCGGTAAAGACGATGGGATTCTCTGGGGTTCGATTTGTTGTGATTTTTGCTTTGTTGACGGCGTCGTGTATGGCTCAGGCTCCGGCGCCAGCGCCGGCCCAGGGTCCTTCACAGCCTCTACCTCCGACACCAGCCACGCCGGCGCCTTCGCCGGTCGTTTTCTCTCCAGCCCCGACTCCGGCTCAAAACAGAGCACCATCACCATCACCGGCTCCGGCATCGCCCTCACCCGCTCCAGAAGCTCCGTCCCCGGCACCGGCGACACCTGCTCCATCTCCGGCGACTAGTGCGCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTGGGTCTCCCACTGGTGGTCCTGTAGTTCCACCCATCGCTTCTCCTCCTTCACCCACCGGAGGCGAGGTGCCTTCACCGGCGCCCCAAGGACCGCCGGCTGACAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCGGCTACATTCGGGATCGCTCTGGCTGGATCTCTGTTCGCAGTGGTACTCTTAGCGTAGAGCTGATGGAATTCTTTTGCTTTTACGAAATTCAATTATGTGTTTTGTTAGTGTGTTGGACATGATTAAGAGAGTTGTTTTTGTAATTTTGGTAGTCATGATTATTTGAGGATTCATTGTTCTTCTGTCGATCACATTTATGCCCATTTTATTTCGTAGAGATACGAATCCTTTGTACATCGAATTAGAGATGAATAAGAGATTTTAATCTTCATTCTTTTAAGTTGGAATCTTTTTCTCTGTGTCGTGTTTATGAACAGTAGTGATGACTTTTGAAGAAGGGGATGACGGTGTAATAGTGATGACTTTTGAATAACTTGTCCAACCATTGACGTGTGCTTCCCAGGAAAAAGGTGATTTTACATCGTCTTTACACTTTTTACTTGCACATTTGTTTTTATTTTAGTTTAAATATTAAATTTGATTTCTATCAGTCGTCCTCTAGTTTCATAAGACACTTCTAAATAGTTTATATGATATGAACTATAGAAGACCCTTCTAAATAGTTTATATGATATGAACTATAAAGGTATGAAATTGATTTTATTTCAGAAAAAGTATAAAAGTAGATTAATATAGTCCCAATAAAAACAGAGATTCAAGACAGTGAAAAATTAGGGGAAGAAAAACCCCCCAAGAGTTGGAAAAAGAAGCTAAAAGGAAATTTAGGAATTAAAGAATAAAAGAACGATTTCGATTTTTATATTTTATAAAAAATTAAAAAGAAGAAAGCGAAATCTCCCAATTGGGGCTGGCCCAAATAAATTTGTTACGGGCCTAAATGAGGCCAACATATACCCTTGGTAGCATTTACACTTTATCTATATTGTCTTGTGTACTACGGCCGTACTATATTCTCTCTGTTTGGGAACCCCACATAATTTACAAACAGATGTTGTGGCAAGCAATAAATGAGAGTAATATGAAATTTTTTCATGCTACCGTAGTACTATGAGGCACCATAAGAATGGATAATGTGGCTAGGAGTTAGGTGCAACATGTGCATCTTTTAGAGGGTCTCGACACGACCGTGCAACACTTGTTCTCGTCCACGAGCAAGTTAGCCAACTCTGATTTGGATCGCCGGTGGCCCACAAGGCCTATCTCGCAACCTCTACCACCATTCTTAGAAAACAATTTTAGAAAACAGGGTTAGAG TTTCCCTGAGATACTCTGTTTTGAAAAGAAACTTGTTTCCTTTTTCTTTCCGGTAAAGACGATGGGATTCTCTGGGGTTCGATTTGTTGTGATTTTTGCTTTGTTGACGGCGTCGTGTATGGCTCAGGCTCCGGCGCCAGCGCCGGCCCAGGGTCCTTCACAGCCTCTACCTCCGACACCAGCCACGCCGGCGCCTTCGCCGGTCGTTTTCTCTCCAGCCCCGACTCCGGCTCAAAACAGAGCACCATCACCATCACCGGCTCCGGCATCGCCCTCACCCGCTCCAGAAGCTCCGTCCCCGGCACCGGCGACACCTGCTCCATCTCCGGCGACTAGTGCGCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTGGGTCTCCCACTGGTGGTCCTGTAGTTCCACCCATCGCTTCTCCTCCTTCACCCACCGGAGGCGAGGTGCCTTCACCGGCGCCCCAAGGACCGCCGGCTGACAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCGGCTACATTCGGGATCGCTCTGGCTGGATCTCTGTTCGCAGTGGTACTCTTAGCGTAGAGCTGATGGAATTCTTTTGCTTTTACGAAATTCAATTATGTGTTTTGTTAGTGTGTTGGACATGATTAAGAGAGTTGTTTTTGTAATTTTGGTAGTCATGATTATTTGAGGATTCATTGTTCTTCTGTCGATCACATTTATGCCCATTTTATTTCGTAGAGATACGAATCCTTTGTACATCGAATTAGAGATGAATAAGAGATTTTAATCTTCATTCTTTTAAGTTGGAATCTTTTTCTCTGTGTCGTGTTTATGAACAGTAGTGATGACTTTTGAAGAAGGGGATGACGGTGTAATAGTGATGACTTTTGAATAACTTGTCCAACCATTGACGTGTGCTTCCCAGGAAAAAGGTGATTTTACATCGTCTTTACACTTTTTACTTGCACATTTGTTTTTATTTTAGTTTAAATATTAAATTTGATTTCTATCAGTCGTCCTCTAGTTTCATAAGACACTTCTAAATAGTTTATATGATATGAACTATAGAAGACCCTTCTAAATAGTTTATATGATATGAACTATAAAGGTATGAAATTGATTTTATTTCAGAAAAAGTATAAAAGTAGATTAATATAGTCCCAATAAAAACAGAGATTCAAGACAGTGAAAAATTAGGGGAAGAAAAACCCCCCAAGAGTTGGAAAAAGAAGCTAAAAGGAAATTTAGGAATTAAAGAATAAAAGAACGATTTCGATTTTTATATTTTATAAAAAATTAAAAAGAAGAAAGCGAAATCTCCCAATTGGGGCTGGCCCAAATAAATTTGTTACGGGCCTAAATGAGGCCAACATATACCCTTGGTAGCATTTACACTTTATCTATATTGTCTTGTGTACTACGGCCGTACTATATTCTCTCTGTTTGGGAACCCCACATAATTTACAAACAGATGTTGTGGCAAGCAATAAATGAGAGTAATATGAAATTTTTTCATGCTACCGTAGTACTATGAGGCACCATAAGAATGGATAATGTGGCTAGGAGTTAGGTGCAACATGTGCATCTTTTAGAGGGTCTCGACACGACCGTGCAACACTTGTTCTCGTCCACGAGCAAGTTAGCCAACTCTGATTTGGATCGCCGGTGGCCCACAAGGCCTATCTCGCAACCTCTACCACCATTCTTAGAAAACAATTTTAGAAAACAGGGTTAGAG ATGGGATTCTCTGGGGTTCGATTTGTTGTGATTTTTGCTTTGTTGACGGCGTCGTGTATGGCTCAGGCTCCGGCGCCAGCGCCGGCCCAGGGTCCTTCACAGCCTCTACCTCCGACACCAGCCACGCCGGCGCCTTCGCCGGTCGTTTTCTCTCCAGCCCCGACTCCGGCTCAAAACAGAGCACCATCACCATCACCGGCTCCGGCATCGCCCTCACCCGCTCCAGAAGCTCCGTCCCCGGCACCGGCGACACCTGCTCCATCTCCGGCGACTAGTGCGCCTACCCCAGCTCCAAGCTCCAGTCCTACTCCTGGGTCTCCCACTGGTGGTCCTGTAGTTCCACCCATCGCTTCTCCTCCTTCACCCACCGGAGGCGAGGTGCCTTCACCGGCGCCCCAAGGACCGCCGGCTGACAACCCAGCTGGAGCGGCGTCGCACATCGGCGGAGCGGCTACATTCGGGATCGCTCTGGCTGGATCTCTGTTCGCAGTGGTACTCTTAGCGTAG MGFSGVRFVVIFALLTASCMAQAPAPAPAQGPSQPLPPTPATPAPSPVVFSPAPTPAQNRAPSPSPAPASPSPAPEAPSPAPATPAPSPATSAPTPAPSSSPTPGSPTGGPVVPPIASPPSPTGGEVPSPAPQGPPADNPAGAASHIGGAATFGIALAGSLFAVVLLA Homology
BLAST of Tan0019029 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05 Identity = 60/119 (50.42%), Postives = 73/119 (61.34%), Query Frame = 0
BLAST of Tan0019029 vs. NCBI nr
Match: XP_038881138.1 (vegetative cell wall protein gp1-like [Benincasa hispida]) HSP 1 Score: 202.6 bits (514), Expect = 2.7e-48 Identity = 137/166 (82.53%), Postives = 145/166 (87.35%), Query Frame = 0
BLAST of Tan0019029 vs. NCBI nr
Match: KAA0036330.1 (hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa] >TYK12724.1 hypothetical protein E5676_scaffold255G003120 [Cucumis melo var. makuwa]) HSP 1 Score: 200.7 bits (509), Expect = 1.0e-47 Identity = 132/166 (79.52%), Postives = 139/166 (83.73%), Query Frame = 0
BLAST of Tan0019029 vs. NCBI nr
Match: XP_023544207.1 (vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 163.3 bits (412), Expect = 1.8e-36 Identity = 123/178 (69.10%), Postives = 136/178 (76.40%), Query Frame = 0
BLAST of Tan0019029 vs. NCBI nr
Match: XP_022950235.1 (vegetative cell wall protein gp1-like [Cucurbita moschata]) HSP 1 Score: 156.0 bits (393), Expect = 2.9e-34 Identity = 119/178 (66.85%), Postives = 134/178 (75.28%), Query Frame = 0
BLAST of Tan0019029 vs. NCBI nr
Match: XP_022978568.1 (vegetative cell wall protein gp1-like [Cucurbita maxima]) HSP 1 Score: 155.2 bits (391), Expect = 4.9e-34 Identity = 118/176 (67.05%), Postives = 133/176 (75.57%), Query Frame = 0
BLAST of Tan0019029 vs. ExPASy TrEMBL
Match: A0A5D3CNQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003120 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 4.9e-48 Identity = 132/166 (79.52%), Postives = 139/166 (83.73%), Query Frame = 0
BLAST of Tan0019029 vs. ExPASy TrEMBL
Match: A0A0A0KG74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499150 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 9.0e-42 Identity = 123/166 (74.10%), Postives = 131/166 (78.92%), Query Frame = 0
BLAST of Tan0019029 vs. ExPASy TrEMBL
Match: A0A6J1GF55 (vegetative cell wall protein gp1-like OS=Cucurbita moschata OX=3662 GN=LOC111453383 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 1.4e-34 Identity = 119/178 (66.85%), Postives = 134/178 (75.28%), Query Frame = 0
BLAST of Tan0019029 vs. ExPASy TrEMBL
Match: A0A6J1ITI1 (vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC111478507 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 2.4e-34 Identity = 118/176 (67.05%), Postives = 133/176 (75.57%), Query Frame = 0
BLAST of Tan0019029 vs. ExPASy TrEMBL
Match: A0A6J1KP28 (classical arabinogalactan protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111497414 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 7.2e-23 Identity = 94/172 (54.65%), Postives = 106/172 (61.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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