Tan0018954 (gene) Snake gourd v1

Overview


Name	Tan0018954
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	thylakoid lumenal 17.4 kDa protein, chloroplastic
Location	LG01: 819233 .. 823248 (+)
RNA-Seq Expression	Tan0018954
Synteny	Tan0018954

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCATCAAGATCAGATCCCCAACATCTCAGAACGGATAAGTCAGGCAGAGCGAGCGAGCGGGAAGGAATTCATTTGTCCAAATGGCCACTTTATCAATTCCACTCTCGCAGAATGGTTTCTCTCGCAGATTCTACTCTGCAAAACGCCCACAAATTATATCTCCATTTGCCCATTCAATTGCCCGTATCAGTTGCTGCGGTTAGTTTTTCTTCCATCTCTTCTTCGAGTTTTAACTGTCTCAACTTTTATTTTTATTTTTATTTTTCAACTCTAGTTTTGTGCATTCATTTACTTGAAGAATTGTTACACTTAGTACCATTTATGTGGGTAAATTGCGTTAGAATCTGGGGAGAACTGTTTTCTTTTTCTCGGTCTCAGGGCTTTGATGCCTATATAATGTTGTTAGGATGAGGATGCTGGTTGTGCAAATTGGCCAATGCATTGAATGAGTTCAAAATTGGTAAAAATTTCCCGTTTAGCATAACCTAAAATGTGTTGGACATATTACGTAGCAAATTTGATTACAACTTAAATGACAACAAACAATTACAACATAAATAATAGTACAAACATGGTATGTAACAATAGTTTCAAAACTCAAGAACAAATAATAATAAGTAGTCGAGACTCGCTTACAAAGCGTTGTCCTGAAGATAATTATTCGCTATGCTCGGGTTGCAAGAAGGCTACAACGATTGTCTCAGTAAGATGCAATGACTAACTCCGATAGAACAATAACCTTGAATTATTCGGATATGGCAAAACTCTTGGATACTTGCTCATAACTTGACTCAAGAATTAAAGAGAAGAAAGAGGAGATAGAAGAACTCTTCAATTACAATGAGAAATGAGAAATGAATGAGACGCTCCAAATGAAGAAACAAGTTGCTATTCATAGGTTAGCAAATTAGTAACTCTCCAAAAATAAAATTAATTTAAACAATATGAAACATAAATCAAATTTAACTCAATTGTGTAGTTACTTGTAAAAATTCAAACATAACTCGACAAATTTAACTTTTAAGTTAAATTTGTAAAAGAAACATCAATACATTTTGATATTTCAAACCATTTTTAAACTTTTGAATTTCAAGTCAAGTAACAACATCAATTCATTTTTTATGTTCCAAACCAACACTTTTTTTCACAAACTTTTACTATAAAATCCAACAAAATGTGCTTAGCTGAATACAATTTGAACTCTTCACCACTTAAGGGAAAAGAAATATCATGTGTATTCAAGCACTATGAGTTATGTTTATCTGCTATGCTATGCCATTTTATTAACTGATGTGAAAATCGTTTGTGTGCTGCAATTGCAGCTACTGGGGATGGGGCAGAACCAAAAGAGAGCTTGTCACCCTGCAACCATGTTGGTACTGTAGCTTGTGGTCTTCTTGCTATTTGGGCTTTGACAAATACCTCTCCTGTTATTGCAGCTAATCAGGTTAATACCACATGACCTTTCTCCATTCACATGGTCTGATGCAATGGACAATTAATAGCCACATCTATGACATTTTTCACTTTCCTGCACTTCATTTAGTGATCACTTTGGAGTTTATGCATCTTTTGTTGATTTATAGTTTATACTTTGAGTTTCATATGGTAGTACTCTTTGTACCATAGATAAATTTTCAACTCTTAAGATAATATTGATATGACCTTTTAACTATTATGATGATAAATTTTTCGTGATGTTTGGGTACATGAGCAAAATTCTCAAGCGCCATTCCAAATGCATAATTTTGCATTTAAATTTAGGCTTAAGATTTAAAACCCGTTATGTTTTGGGGGAATGAGTGTGTAATTTGGATTTTTAATGCTCTGATGTACTCAACTCTACCACAAGTGGCTGAGGCAACCTTTGTATGAACAACCACCTCCTAAATACACACAATAACACCTAGTACACACATAAAATCACTCAAGGGAAGGAGAAAGGACTAACCTTGATAGTCAAGCCTTTGGAAAGGAAAACTTGTTCTCAATCCAAAGTCGAAACCCTCAACGAGTTTGAGGACCAATCGAGCTCGAAGGTTTTTGGGGTGTGCAAGATCTAATGCAAGAAAATGAAAACATGCTCACGGCTTGGAAGCAAAGAAACAAGGCTCAATGGCTCTTTGATTCATCCATGAAAAATTCTACCTCAAAATCTACAAGTTTGGCTTTTAAATAAGCCTTGGAAAGTAAAGCTAACTAAAGGTAAAAGACAATCCTAAATTAACCTAACTAGAATAGTGTCTAAAACAAGTTAAGTTAAGTTCCAACTAAATACTCTAACTATTTTGTATGACCTTTATGGGCCTTGGACATACAAATATGTTTTAAAATTAAAGCCCAAAAGAAGGGTGCAATAAGAATTAGATGAAAACGTAACTTTAAGAATTAAACCCTAAATAGTGTTTAAATTGATGCTTTCGGGTTTGGTATCTTCATGATGCTTGGAAGCTTGTTTCTCCATTCATTCTCCTTCCTCATGAAGCCTAGTACTTTAAATATTGGAGTGGAGATTTCCTTCTTCATTGGTTGGCCCTCGTGATGGCTTGCTTGAAACAATATCATGCTCTTCCTGACAGGATATGCTGTAATATTTTTCCAGATTCTAACTGAAATTCAGTTATCTACTTTACCAGTCTTCCTATTGGCATCCAGTTCATCTTCTTTCAGATGCTCTATTTTCTTCTCTTTTTGTTTTTGTTATGCTATAGTCATGATTGACAAATGTCATTCACTTTCTGTGGCAAGCGTCCAACAACTCATAATATTTAAATTTGAGAAAGAAACCTGTTGATCTCATAATATCTGGGACTTGCAGAGGCTGCCTCCATTGTCAACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGGGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGATTACACAAATGAAAAAAATCAGTTAAAAGGGAAATCTCTTGCTGCTGCATTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAAGTCTCTCTATCTTACCCCCACCCCAATAGGGAGATCGGTTGTCCGCAAACCTGTCATATTCTAAGCATGAACTACTCATTAAACAAAGGAGAAGGACTTCCATTTTATACAATGACCTAGTTTTCGAATTCAACCAATATTTGATATGGTACATAGACAATATTCACGGTGTTCAACACATGCTAGTTTGTAGAATATATCCCAGACTCCAGAACTCCTTTTGTGCACGGATGGTCTCATTTTAATTGTTAACTGAAATGGAACACAAAAAGATGTTTCATACTATGCGCTCTTCATGTGCTTCAAGTTAATTGATTGGAAGCCAAAAATGTATTCGAGTAGAATAATAAAAAGTGTCATGAACACATTAACCTGATAAGTTGTCTGTGAATGCCTTAATTGATCCAAAGCTGTTCATTTGGGAATTGGGATCTCAGAATACTAAAGTATGTAAGACACAATCACATATACATCACATTTGCTAAAAAATCTTAAATTACCTGTTTCATTTTAAAAGAGGAATCAAGAATCCCTTAAAGAAAAAAACTCATAATATGGCTTTCAAATATCATGACAACATTGCATATTGCAGGTGTTGATTTCTCGAATGCGGTTCTAGATAGGGTAAACTTTGGGAAAGCCAATCTTCAAGGAGCGTTGTTCAAGAACACTGTACTTTCAGGGTCCACGTTTGATGATGCTCAATTGCAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTTAATATATTTTCTATACTTCTACCATATCTATTGTATAAACAACTTGATGATTTTGGTATGTAATACGTATTCAAAGAGAGAACTCCTCTGACTCCTATTGAAAGCACTATGTGCTGTCACCGTG

mRNA sequence

GCCATCAAGATCAGATCCCCAACATCTCAGAACGGATAAGTCAGGCAGAGCGAGCGAGCGGGAAGGAATTCATTTGTCCAAATGGCCACTTTATCAATTCCACTCTCGCAGAATGGTTTCTCTCGCAGATTCTACTCTGCAAAACGCCCACAAATTATATCTCCATTTGCCCATTCAATTGCCCGTATCAGTTGCTGCGCTACTGGGGATGGGGCAGAACCAAAAGAGAGCTTGTCACCCTGCAACCATGTTGGTACTGTAGCTTGTGGTCTTCTTGCTATTTGGGCTTTGACAAATACCTCTCCTGTTATTGCAGCTAATCAGAGGCTGCCTCCATTGTCAACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGGGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGATTACACAAATGAAAAAAATCAGTTAAAAGGGAAATCTCTTGCTGCTGCATTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCGAATGCGGTTCTAGATAGGGTAAACTTTGGGAAAGCCAATCTTCAAGGAGCGTTGTTCAAGAACACTGTACTTTCAGGGTCCACGTTTGATGATGCTCAATTGCAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTTAATATATTTTCTATACTTCTACCATATCTATTGTATAAACAACTTGATGATTTTGGTATGTAATACGTATTCAAAGAGAGAACTCCTCTGACTCCTATTGAAAGCACTATGTGCTGTCACCGTG

Coding sequence (CDS)

ATGGCCACTTTATCAATTCCACTCTCGCAGAATGGTTTCTCTCGCAGATTCTACTCTGCAAAACGCCCACAAATTATATCTCCATTTGCCCATTCAATTGCCCGTATCAGTTGCTGCGCTACTGGGGATGGGGCAGAACCAAAAGAGAGCTTGTCACCCTGCAACCATGTTGGTACTGTAGCTTGTGGTCTTCTTGCTATTTGGGCTTTGACAAATACCTCTCCTGTTATTGCAGCTAATCAGAGGCTGCCTCCATTGTCAACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACAATAGGTCAAGCAAATGGGGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGATTACACAAATGAAAAAAATCAGTTAAAAGGGAAATCTCTTGCTGCTGCATTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCGAATGCGGTTCTAGATAGGGTAAACTTTGGGAAAGCCAATCTTCAAGGAGCGTTGTTCAAGAACACTGTACTTTCAGGGTCCACGTTTGATGATGCTCAATTGCAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

Protein sequence

MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATGDGAEPKESLSPCNHVGTVACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

Homology

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BLAST of Tan0018954 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2)

HSP 1 Score: 297.7 bits (761), Expect = 1.1e-79
Identity = 151/240 (62.92%), Postives = 186/240 (77.50%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCA---TGDGAEPKESLSPCNHV 60
           MA+L +  ++N  S  F+S      +     S+  + C A     +G   K+SL P   +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 61  GTVACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRF 120
           G++AC  L    LT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 121 CDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 180
           CDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNF
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNF 180

Query: 181 GKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           GK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 GKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236

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BLAST of Tan0018954 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.0e-11
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 0


Query: 76  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAA 135
           VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 79  VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 138

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGS 195
            M E+ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +VL+ S
Sbjct: 139 DMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRS 198

Query: 196 TFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 237
               A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 199 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

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BLAST of Tan0018954 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.4e-07
Identity = 35/119 (29.41%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 129 GKSLAAAL-----MSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQ 188
           GKSL  A      ++++ F  ADL   V + +  +GA   G D +N +    +F  A+L 
Sbjct: 61  GKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTSFKGADLT 120

Query: 189 GALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGCR 238
            A+    ++  + FDDA++  A F   ++   ++ KLC     VNP      R  LGC+
Sbjct: 121 NAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVSTRESLGCQ 179

[Close]

BLAST of Tan0018954 vs. ExPASy Swiss-Prot
Match: P74221 (Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1152 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 7.0e-05
Identity = 31/98 (31.63%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 126 QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGA 185
           Q+    L  A +++A    ADL++  +  A+AV  +FKG   S A L       ANL+GA
Sbjct: 91  QMNWADLTYAKLNQADLSHADLTKASLYGAFAVKTNFKGAKLSGATL-----AHANLRGA 150

Query: 186 LFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 224
             + T L+G+    A L++A F+     + +LQ+ C++
Sbjct: 151 NLEQTNLTGANLFAANLREANFQKADFSWANLQEACLS 183

[Close]

BLAST of Tan0018954 vs. ExPASy Swiss-Prot
Match: P81778 (Thylakoid lumenal 17.4 kDa protein (Fragment) OS=Spinacia oleracea OX=3562 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 2.0e-04
Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 0


Query: 79  ANQRLPPLSTEPNRCERAFVGNT 102
           ANQRLPPLS +P+RCERAFVGNT
Sbjct: 1   ANQRLPPLSNDPDRCERAFVGNT 23

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BLAST of Tan0018954 vs. NCBI nr
Match: XP_022140841.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Momordica charantia])

HSP 1 Score: 451.8 bits (1161), Expect = 3.6e-123
Identity = 221/237 (93.25%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATGDGAEPKESLSPCNHVGTV 60
           MATLS PLSQNGFSRRFYSAKR Q+ISPF  S+AR SCCATG+GA+PKESLSPCN +GTV
Sbjct: 1   MATLSAPLSQNGFSRRFYSAKRRQLISPFPRSLARFSCCATGEGAQPKESLSPCNRIGTV 60

Query: 61  ACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLA+WALTNTSPVIAANQRLPPLSTEPNRCERA+VGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAYVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKG DFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGADFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTI PEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIGPEGRAELGCR 237

[Close]

BLAST of Tan0018954 vs. NCBI nr
Match: XP_022984509.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 449.5 bits (1155), Expect = 1.8e-122
Identity = 220/237 (92.83%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATGDGAEPKESLSPCNHVGTV 60
           MATLSIP SQNGFSRRF+SAK P II+PF+HS+ARISC A  DGAEP+ESLSPCNH+G+V
Sbjct: 41  MATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRDGAEPRESLSPCNHIGSV 100

Query: 61  ACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLA+WALTNTSP  AANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 101 ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 160

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 161 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 220

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 221 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 277

[Close]

BLAST of Tan0018954 vs. NCBI nr
Match: XP_023541447.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 448.4 bits (1152), Expect = 4.0e-122
Identity = 221/237 (93.25%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATGDGAEPKESLSPCNHVGTV 60
           MA LSIPLSQNGFSR FYSAKRPQ+ISP A S+ARI+CCAT DGAEPKESLSPC H+GT 
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60

Query: 61  ACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLA+WALTNT+PVIAA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGA FKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Tan0018954 vs. NCBI nr
Match: XP_022968163.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 444.5 bits (1142), Expect = 5.7e-121
Identity = 218/237 (91.98%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATGDGAEPKESLSPCNHVGTV 60
           MAT SIPLSQNGF R FYSAKRPQ++SP A S+ARI+CCAT DGAEPKESLS C H+GTV
Sbjct: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60

Query: 61  ACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLA+WALTNT+PV AA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Tan0018954 vs. NCBI nr
Match: XP_008455988.1 (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 443.4 bits (1139), Expect = 1.3e-120
Identity = 217/237 (91.56%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATGDGAEPKESLSPCNHVGTV 60
           MATLSIP SQNGFSR F+S KRPQI+ PF HS+ RI+C AT DGA+P+E+LSPC H+ TV
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 61  ACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLA+WALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Tan0018954 vs. ExPASy TrEMBL
Match: A0A6J1CH87 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011411 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.7e-123
Identity = 221/237 (93.25%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATGDGAEPKESLSPCNHVGTV 60
           MATLS PLSQNGFSRRFYSAKR Q+ISPF  S+AR SCCATG+GA+PKESLSPCN +GTV
Sbjct: 1   MATLSAPLSQNGFSRRFYSAKRRQLISPFPRSLARFSCCATGEGAQPKESLSPCNRIGTV 60

Query: 61  ACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLA+WALTNTSPVIAANQRLPPLSTEPNRCERA+VGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAYVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKG DFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGADFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTI PEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIGPEGRAELGCR 237

[Close]

BLAST of Tan0018954 vs. ExPASy TrEMBL
Match: A0A6J1JAQ7 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482783 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.6e-123
Identity = 220/237 (92.83%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATGDGAEPKESLSPCNHVGTV 60
           MATLSIP SQNGFSRRF+SAK P II+PF+HS+ARISC A  DGAEP+ESLSPCNH+G+V
Sbjct: 41  MATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRDGAEPRESLSPCNHIGSV 100

Query: 61  ACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLA+WALTNTSP  AANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 101 ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 160

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 161 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 220

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 221 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 277

[Close]

BLAST of Tan0018954 vs. ExPASy TrEMBL
Match: A0A6J1HX78 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467480 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 2.8e-121
Identity = 218/237 (91.98%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATGDGAEPKESLSPCNHVGTV 60
           MAT SIPLSQNGF R FYSAKRPQ++SP A S+ARI+CCAT DGAEPKESLS C H+GTV
Sbjct: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60

Query: 61  ACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLA+WALTNT+PV AA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Tan0018954 vs. ExPASy TrEMBL
Match: A0A1S3C2V7 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496052 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.2e-121
Identity = 217/237 (91.56%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATGDGAEPKESLSPCNHVGTV 60
           MATLSIP SQNGFSR F+S KRPQI+ PF HS+ RI+C AT DGA+P+E+LSPC H+ TV
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 61  ACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLA+WALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKNQLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of Tan0018954 vs. ExPASy TrEMBL
Match: A0A6J1E548 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430851 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.0e-120
Identity = 215/237 (90.72%), Postives = 226/237 (95.36%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATGDGAEPKESLSPCNHVGTV 60
           MATLSIP SQNGFSRRF+SAK P + +PF+HS+A ISC A  DGA P+ESLSPCNH+G+V
Sbjct: 45  MATLSIPFSQNGFSRRFFSAKHPPVTAPFSHSLAPISCSANRDGAVPRESLSPCNHIGSV 104

Query: 61  ACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLA+WALTNTSP  AANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 105 ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 164

Query: 121 TNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 165 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 224

Query: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVLSGSTFDDA+LQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 225 NLQGALFKNTVLSGSTFDDAELQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 281

[Close]

BLAST of Tan0018954 vs. TAIR 10
Match: AT5G53490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 297.7 bits (761), Expect = 8.0e-81
Identity = 151/240 (62.92%), Postives = 186/240 (77.50%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCA---TGDGAEPKESLSPCNHV 60
           MA+L +  ++N  S  F+S      +     S+  + C A     +G   K+SL P   +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAGENRENGEGVKKSLFPLKEL 60

Query: 61  GTVACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRF 120
           G++AC  L    LT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRF
Sbjct: 61  GSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRF 120

Query: 121 CDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNF 180
           CDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNF
Sbjct: 121 CDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNF 180

Query: 181 GKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           GK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 GKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 236

[Close]

BLAST of Tan0018954 vs. TAIR 10
Match: AT5G53490.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 297.4 bits (760), Expect = 1.1e-80
Identity = 150/239 (62.76%), Postives = 185/239 (77.41%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCATG--DGAEPKESLSPCNHVG 60
           MA+L +  ++N  S  F+S      +     S+  + C      +G   K+SL P   +G
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSGENRENGEGVKKSLFPLKELG 60

Query: 61  TVACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFC 120
           ++AC  L    LT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DLRFC
Sbjct: 61  SIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLRFC 120

Query: 121 DYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFG 180
           DYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRVNFG
Sbjct: 121 DYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVNFG 180

Query: 181 KANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           K+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LGCR
Sbjct: 181 KSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGCR 235

[Close]

BLAST of Tan0018954 vs. TAIR 10
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 292.4 bits (747), Expect = 3.4e-79
Identity = 151/254 (59.45%), Postives = 186/254 (73.23%), Query Frame = 0


Query: 1   MATLSIPLSQNGFSRRFYSAKRPQIISPFAHSIARISCCA-----------------TGD 60
           MA+L +  ++N  S  F+S      +     S+  + C A                   +
Sbjct: 1   MASLPVQFTRNQISSPFFSVN----LRREPRSLVTVHCSAKVVYVILICIMFSAGENREN 60

Query: 61  GAEPKESLSPCNHVGTVACGLLAIWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIG 120
           G   K+SL P   +G++AC  L    LT  SPVIAANQRLPPLSTEP+RCE+AFVGNTIG
Sbjct: 61  GEGVKKSLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIG 120

Query: 121 QANGVYDKPIDLRFCDYTNEKNQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK 180
           QANGVYDKP+DLRFCDYTN++  LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK
Sbjct: 121 QANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK 180

Query: 181 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 238
           GV+F+NAV+DRVNFGK+NL+GA+F+NTVLSGSTF++A L+D VFEDTIIGYIDLQK+C N
Sbjct: 181 GVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRN 240

[Close]

BLAST of Tan0018954 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.6e-12
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 0


Query: 76  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAA 135
           VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 79  VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 138

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGS 195
            M E+ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +VL+ S
Sbjct: 139 DMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRS 198

Query: 196 TFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 237
               A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 199 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

[Close]

BLAST of Tan0018954 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.6e-12
Identity = 50/166 (30.12%), Postives = 80/166 (48.19%), Query Frame = 0


Query: 76  VIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKNQLKGKSLAAA 135
           VIA++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 5   VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 64

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGS 195
            M E+ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +VL+ S
Sbjct: 65  DMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRS 124

Query: 196 TFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 237
               A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 125 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 166

The following BLAST results are available for this feature:

BLAST of Tan0018954 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P81760	1.1e-79	62.92	Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
Q8H1Q1	5.0e-11	30.12	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
B1WVN5	4.4e-07	29.41	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]
P74221	7.0e-05	31.63	Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
P81778	2.0e-04	86.96	Thylakoid lumenal 17.4 kDa protein (Fragment) OS=Spinacia oleracea OX=3562 PE=1 ...	[more]

BLAST of Tan0018954 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140841.1	3.6e-123	93.25	thylakoid lumenal 17.4 kDa protein, chloroplastic [Momordica charantia]	[more]
XP_022984509.1	1.8e-122	92.83	thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]
XP_023541447.1	4.0e-122	93.25	thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pe...	[more]
XP_022968163.1	5.7e-121	91.98	thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]
XP_008455988.1	1.3e-120	91.56	PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo]	[more]

BLAST of Tan0018954 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CH87	1.7e-123	93.25	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Momordica charantia OX=3673...	[more]
A0A6J1JAQ7	8.6e-123	92.83	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1HX78	2.8e-121	91.98	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]
A0A1S3C2V7	6.2e-121	91.56	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1E548	4.0e-120	90.72	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=...	[more]

BLAST of Tan0018954 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53490.1	8.0e-81	62.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.2	1.1e-80	62.76	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.3	3.4e-79	59.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12250.1	3.6e-12	30.12	Pentapeptide repeat-containing protein	[more]
AT1G12250.2	3.6e-12	30.12	Pentapeptide repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47485:SF1	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 1..167
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 123..165
IPR044195	Pentapeptide repeat containing protein TL17-like	PANTHER	PTHR47485	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018954.1	Tan0018954.1	mRNA
Tan0018954.2	Tan0018954.2	mRNA