Tan0018744 (gene) Snake gourd v1

Overview
NameTan0018744
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein CURVATURE THYLAKOID 1A, chloroplastic-like
LocationLG10: 1715775 .. 1718403 (-)
RNA-Seq ExpressionTan0018744
SyntenyTan0018744
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGAAGAAAATTTTGAGTCCTCAAAATAAGGATTTCAGATAGGGAACTAGCCAATCACAACGAAGGACCTGTCCACGTGTCGCTACCAGAGGCCATCTTCCGAAAATGTGATCGCGGATAAACAAGCCATTTCTGAGCATAGAAAATGGTGAACAAAAAAAATCTCTGCAAAAACCAGGGATCGAAAAGTCGTCAGCAGCAGCAGCTCCTCGACGGCCATTTGATTAAGGATTGCTCTCTCTTTCCGGCGCCGATTCTTAGTTTGATTGAACTACCTGCAAAGAAATGGCAGCCACGGCCTCCCCCACAGCGGCCACCGCCGTTCTGAGACCTTCTCTGACTGCTCCTCAACCCAGTCGCCGCTCCACCGTTCCACTCCTCCCCCCTCGACTTGTATCCCCGTCTTTCCCCACTTCTCTCAAACTCTCATTGGGTAACTTTCTCCTAATATCCCATTTATTTCTTTTGGGCATTTCGTCGAACACCTTGTGGGAGTTGAAAATTTCGGTCTGTTCTGATGTTTCGTTTCTCATTTTGCTCTGTTTCTTTGGGTAGCTTCATAGTTGGGTCTTAACCTGTCGAGCTGAGTTGTATGGGTATTCTTCAAATCATTTTTATATGCTCATGAAGGAAATTTGTTAGAGAACTGAAATTTAACCATGGATTATGGAGTCACTGTTCTTTGGGTTTTCAAAATACATTACGTTGCAAGCTTGCTATTTTATCGATTCAATCACTCGGACCAAGGTTGGGGCTTCGTAAAATTCTGCATTAGAAGAAATTGCATTTTTGTCTTTTGAAGCAAGTTCAGTACTTTGTGATTGAATTTGGAGAAAGTTTCACTCGTGACTGAAGAGTGACTATTCCATCACTGTGATGATGGAAATGGTTAATTGTTGTTTTTGTTATTTGAGCCAGAAGTTTATTTAGTTTTATAGTTCATTCAATTCTGGCAACTCAACTGCTACAAGATTGAGTGCGTTAAGTTTGCTGGTAACCTGCATTATACTTCTAGATACTTGACCAGTCTTTTTTTCAGGGGCCTTAAAATTTGAAGAAGCGGATGAATGTGCTGTGATATAGTATCCAGAAGTTACACATAAAAAGATTTCAAACTAATTTCGCACATCATACATCTATAACTATGCTTACTATCAACAGAAACCTTGCGATTTGGTGAATTTAGAATAAGAGTTTTGATGTGCAAACGTATAGCTTTATACATCCATTAAATATCTTAGATTTGTGCAGCTTATGGAACTTCAGTTTTAGAGAAGATGCATTATATGCATTTTAGGGAAATCAGAGCCAATTTTCTAGTTGGCAGCCTGCCACCGTTTTTATGGGATAAAAATGGTCTTTTTTTTATTGTCGATTGCCATTTCTGACTATGAATTAGATAATTTGTCACTGAGCATATTAGTTTCTTGATTTAAACTCTTTATATCCATTCTTTATTGGATTTTCCCAACGTACCATTTCGTGACAGAGTCTCGTAGATCGTCTCTACTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGTTGCTGATGCATCTGAGCTCTTTACAGACTTGAAAGAAAAGGTAGATCCACAGGAAACATAGCAAGGCCCGATATTGTGATAAACCTGAGGAAGTTGTTGACTTTTTATCTGTATACTATTTTTCGTCATTCATTTTATGATCTTTCTGTTAGTTATACTGTCTCTGGGATGACTCTTAAGAAATAATTTCATCCTACTGTTTACTAGTGGGATGCCCTTGAGAACAAATCCACGGTACTTCTCTATGGAGGCGGTGCGATTGTTGCTGTTTGGCTTTCTTCCATTCTTGTTGGTGCAATCAACTCAGTTCCATTGGTATATGATTCCATCAAACTCATGCTTCTGTATTTTCGATCTTCTATATTCGCTGATTGGCATCGTTGTTGCTAGTTGATGTTTTCTCTTATTATCCACATGTAATATTGCTCTCAAATTTTTACTTCCAGTTTGTTTCTTCTCCTTCTAAAGCCATTTGACACTTACTCTCCATCCATCTTCTCATCAGCTTCCGAAGATCCTGGAGTTGGTAGGACTTGGATATACGGGGTGGTTCGTGTATCGATATCTACTCTTCAAGGTGAGTTGAGAAGAGAACTATGGCTTGTTTGAAACAAGTTTGCATTTTATCATGACTTTAATGTTTGATATCTTCTCAAGCTTCATCATTGATGAAATTCCAATACAGTTTCCAAGTTTTGTTCGAGATTGAAAATTTTGAAGTTATAGTTACATATTTTCTAATGAGATGATCAGACTAGGTATTAACTGGAAAAATGTTTTCGTATGTTTCTTTTTGCTTCCTCAGTCAAGCAGAAAGGAGCTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAGCCGAATAAGATTTGCGTTATCGGGCGCCATGTTCGACATGCTTAGTACCTCTTATTATCATCATTTTGTACTCTATTCTCTTTCGTTTATAAGAGGCAATCTTAAATCATGTAATGTGGAATAGGCTTTGCTTTAATCCCAGTAACTCATGTTCCCCTTCATTGTATGTGTAATAAGATTTGTCAAGTTCATTAGAATGAAGCCCCCCTTTTCTCAAA

mRNA sequence

GGGGAAGAAAATTTTGAGTCCTCAAAATAAGGATTTCAGATAGGGAACTAGCCAATCACAACGAAGGACCTGTCCACGTGTCGCTACCAGAGGCCATCTTCCGAAAATGTGATCGCGGATAAACAAGCCATTTCTGAGCATAGAAAATGGTGAACAAAAAAAATCTCTGCAAAAACCAGGGATCGAAAAGTCGTCAGCAGCAGCAGCTCCTCGACGGCCATTTGATTAAGGATTGCTCTCTCTTTCCGGCGCCGATTCTTAGTTTGATTGAACTACCTGCAAAGAAATGGCAGCCACGGCCTCCCCCACAGCGGCCACCGCCGTTCTGAGACCTTCTCTGACTGCTCCTCAACCCAGTCGCCGCTCCACCGTTCCACTCCTCCCCCCTCGACTTGTATCCCCGTCTTTCCCCACTTCTCTCAAACTCTCATTGGAGTCTCGTAGATCGTCTCTACTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGTTGCTGATGCATCTGAGCTCTTTACAGACTTGAAAGAAAAGTGGGATGCCCTTGAGAACAAATCCACGGTACTTCTCTATGGAGGCGGTGCGATTGTTGCTGTTTGGCTTTCTTCCATTCTTGTTGGTGCAATCAACTCAGTTCCATTGCTTCCGAAGATCCTGGAGTTGGTAGGACTTGGATATACGGGGTGGTTCGTGTATCGATATCTACTCTTCAAGTCAAGCAGAAAGGAGCTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAGCCGAATAAGATTTGCGTTATCGGGCGCCATGTTCGACATGCTTAGTACCTCTTATTATCATCATTTTGTACTCTATTCTCTTTCGTTTATAAGAGGCAATCTTAAATCATGTAATGTGGAATAGGCTTTGCTTTAATCCCAGTAACTCATGTTCCCCTTCATTGTATGTGTAATAAGATTTGTCAAGTTCATTAGAATGAAGCCCCCCTTTTCTCAAA

Coding sequence (CDS)

ATGGCAGCCACGGCCTCCCCCACAGCGGCCACCGCCGTTCTGAGACCTTCTCTGACTGCTCCTCAACCCAGTCGCCGCTCCACCGTTCCACTCCTCCCCCCTCGACTTGTATCCCCGTCTTTCCCCACTTCTCTCAAACTCTCATTGGAGTCTCGTAGATCGTCTCTACTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGTTGCTGATGCATCTGAGCTCTTTACAGACTTGAAAGAAAAGTGGGATGCCCTTGAGAACAAATCCACGGTACTTCTCTATGGAGGCGGTGCGATTGTTGCTGTTTGGCTTTCTTCCATTCTTGTTGGTGCAATCAACTCAGTTCCATTGCTTCCGAAGATCCTGGAGTTGGTAGGACTTGGATATACGGGGTGGTTCGTGTATCGATATCTACTCTTCAAGTCAAGCAGAAAGGAGCTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAGCCGAATAA

Protein sequence

MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTRASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE
Homology
[Close]
BLAST of Tan0018744 vs. ExPASy Swiss-Prot
Match: O04616 (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1A PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.6e-46
Identity = 111/166 (66.87%), Postives = 132/166 (79.52%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVS-PSFPTSLKLSLES--RRSSLL 60
           MA + + +++ AV+ P + A   +R S VP LPPR     SF   LKL   +  ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVP 120
           +TRASS E SS+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGAINSVP
Sbjct: 61  KTRASSEETSSI-DTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

Query: 121 LLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           LLPK++ELVGLGYTGWFVYRYLLFKSSRKELA+DIE+LKKKIAG+E
Sbjct: 121 LLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]
BLAST of Tan0018744 vs. ExPASy Swiss-Prot
Match: Q8LDD3 (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1D PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.6e-16
Identity = 43/98 (43.88%), Postives = 65/98 (66.33%), Query Frame = 0 

Query: 66  ESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKILEL 125
           E     A E   D+K   D      ++LLYG GAIVA++L+S +V ++ ++PL PK++E+
Sbjct: 97  EDEETQALEFLNDIKLDSD---KTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEV 156

Query: 126 VGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           VGLGYT WF  RYLLFK +R+EL   +  +KK++ G++
Sbjct: 157 VGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]
BLAST of Tan0018744 vs. ExPASy Swiss-Prot
Match: Q8LCA1 (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1B PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-10
Identity = 42/160 (26.25%), Postives = 88/160 (55.00%), Query Frame = 0 

Query: 3   ATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTRAS 62
           A+AS ++ + +  P+L     +R +       ++V          ++ +R ++ +    +
Sbjct: 23  ASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVR---------NVVTRATTEVGEAPA 82

Query: 63  SSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKI 122
           ++ E+   +  E+    +E W+ +++K  +       +VA+W S+ ++ AI+ +PL+P +
Sbjct: 83  TTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGV 142

Query: 123 LELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGA 163
           LELVG+GYTGWF Y+ L+FK  R+ L + +++  K I G+
Sbjct: 143 LELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]
BLAST of Tan0018744 vs. ExPASy Swiss-Prot
Match: Q9M812 (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CURT1C PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 47/145 (32.41%), Postives = 78/145 (53.79%), Query Frame = 0 

Query: 16  PSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTRASSSEESSVADASEL 75
           P L   + S  +++  LP  L   +   S  LSL    SS+     +S E S  +   ++
Sbjct: 11  PLLLTQRKSNLTSIQKLPFSLTRGTNDLS-PLSLTRNPSSISLMVKASGESSDSSTDLDV 70

Query: 76  FTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKILELVGLGYTGWFV 135
            + ++  WD  E++  ++  G   IVA+W S  L+ AI+ +P++    ELVG+ ++ WF 
Sbjct: 71  VSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFT 130

Query: 136 YRYLLFKSSRKELADDIEALKKKIA 161
           YRYLLFK  R+EL+   + +KK +A
Sbjct: 131 YRYLLFKPDRQELS---KIVKKSVA 151

[Close]
BLAST of Tan0018744 vs. ExPASy Swiss-Prot
Match: Q119Z5 (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=gltX PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.1e-08
Identity = 30/70 (42.86%), Postives = 50/70 (71.43%), Query Frame = 0 

Query: 94  LYGGGAIVAVWLS--SILVGAINSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADD 153
           L+G  A+V +  +  ++++ A++ +P+L  I EL+G+ Y  WFVYRYLL +S+R+EL D 
Sbjct: 809 LFGWLALVILTFTFMAVVIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRSNRQELLDK 868

Query: 154 IEALKKKIAG 162
           IE +K++I G
Sbjct: 869 IENIKREIFG 878

[Close]
BLAST of Tan0018744 vs. NCBI nr
Match: XP_023539167.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.9 bits (725), Expect = 8.9e-73
Identity = 155/163 (95.09%), Postives = 159/163 (97.55%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTR 60
           MAATASPTAATAVLRPSL APQP+RRS +PLLPPRL SPSFPTSLK+SLESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 60

Query: 61  ASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESS ADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 163

[Close]
BLAST of Tan0018744 vs. NCBI nr
Match: XP_022933676.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita moschata] >KAG6597102.1 Protein CURVATURE THYLAKOID 1A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281.6 bits (719), Expect = 4.4e-72
Identity = 154/163 (94.48%), Postives = 158/163 (96.93%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTR 60
           MAATASPTAA AVLRPSL APQP+RRS +PLLPPRL SPSFPTSLK+SLESRRSSLLQTR
Sbjct: 1   MAATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 60

Query: 61  ASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESS ADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 163

[Close]
BLAST of Tan0018744 vs. NCBI nr
Match: XP_022974634.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 281.2 bits (718), Expect = 5.8e-72
Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTR 60
           MAATASPTAATAVLRPSL APQP+RRS +PLLPPR  SP+FPTSLK+SLESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRFGSPAFPTSLKISLESRRSSLLQTR 60

Query: 61  ASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESS ADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 163

[Close]
BLAST of Tan0018744 vs. NCBI nr
Match: XP_023529055.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.1 bits (710), Expect = 4.9e-71
Identity = 154/163 (94.48%), Postives = 156/163 (95.71%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTR 60
           MAATASPTAATAVLRPSLTA QP+RRS +PLLPPRL SPSFPTSLK SLESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRLGSPSFPTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESS ADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAG E
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

[Close]
BLAST of Tan0018744 vs. NCBI nr
Match: XP_022980149.1 (protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 277.3 bits (708), Expect = 8.3e-71
Identity = 153/163 (93.87%), Postives = 156/163 (95.71%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTR 60
           MAATASPTAATAVLRPSLTA QP+RRS +PLLPPR+ SPSFPTSLK SLESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRIGSPSFPTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESS ADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAG E
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

[Close]
BLAST of Tan0018744 vs. ExPASy TrEMBL
Match: A0A6J1EZQ9 (protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441016 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.1e-72
Identity = 154/163 (94.48%), Postives = 158/163 (96.93%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTR 60
           MAATASPTAA AVLRPSL APQP+RRS +PLLPPRL SPSFPTSLK+SLESRRSSLLQTR
Sbjct: 1   MAATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 60

Query: 61  ASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESS ADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 163

[Close]
BLAST of Tan0018744 vs. ExPASy TrEMBL
Match: A0A6J1II67 (protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111473314 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.8e-72
Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTR 60
           MAATASPTAATAVLRPSL APQP+RRS +PLLPPR  SP+FPTSLK+SLESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRFGSPAFPTSLKISLESRRSSLLQTR 60

Query: 61  ASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESS ADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 163

[Close]
BLAST of Tan0018744 vs. ExPASy TrEMBL
Match: A0A6J1IYH5 (protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111479625 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.0e-71
Identity = 153/163 (93.87%), Postives = 156/163 (95.71%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTR 60
           MAATASPTAATAVLRPSLTA QP+RRS +PLLPPR+ SPSFPTSLK SLESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRIGSPSFPTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESS ADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAG E
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

[Close]
BLAST of Tan0018744 vs. ExPASy TrEMBL
Match: A0A6J1E9V5 (protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111432156 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.0e-70
Identity = 153/163 (93.87%), Postives = 155/163 (95.09%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTR 60
           MAATASPTAATAVLRPSLTA QP+RRS +PLLPPRL SPSF TSLK SLESRRSSLLQTR
Sbjct: 1   MAATASPTAATAVLRPSLTAFQPTRRSALPLLPPRLGSPSFTTSLKFSLESRRSSLLQTR 60

Query: 61  ASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120
           ASSSEESS ADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP
Sbjct: 61  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLP 120

Query: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           KILELVGLGYTGWFVYRYLLFKSSRKELADDIE LKKKIAG E
Sbjct: 121 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEVLKKKIAGTE 163

[Close]
BLAST of Tan0018744 vs. ExPASy TrEMBL
Match: A0A5D3D097 (Protein CURVATURE THYLAKOID 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005230 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.9e-69
Identity = 152/164 (92.68%), Postives = 156/164 (95.12%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSP-SFPTSLKLSLESRRSSLLQT 60
           MAATASPTAATAVLRPSL A QP+RRS +PLLPPR+ SP SF TSLKLSL+SRRSSLLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRVGSPSSFSTSLKLSLDSRRSSLLQT 60

Query: 61  RASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120
           RASSSEESS ADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAG E
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164

[Close]
BLAST of Tan0018744 vs. TAIR 10
Match: AT4G01150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 184.5 bits (467), Expect = 6.8e-47
Identity = 111/166 (66.87%), Postives = 132/166 (79.52%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVS-PSFPTSLKLSLES--RRSSLL 60
           MA + + +++ AV+ P + A   +R S VP LPPR     SF   LKL   +  ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVP 120
           +TRASS E SS+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGAINSVP
Sbjct: 61  KTRASSEETSSI-DTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

Query: 121 LLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           LLPK++ELVGLGYTGWFVYRYLLFKSSRKELA+DIE+LKKKIAG+E
Sbjct: 121 LLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]
BLAST of Tan0018744 vs. TAIR 10
Match: AT4G01150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22
Identity = 71/122 (58.20%), Postives = 88/122 (72.13%), Query Frame = 0 

Query: 1   MAATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVS-PSFPTSLKLSLES--RRSSLL 60
           MA + + +++ AV+ P + A   +R S VP LPPR     SF   LKL   +  ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVP 120
           +TRASS E SS+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGAINSVP
Sbjct: 61  KTRASSEETSSI-DTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

[Close]
BLAST of Tan0018744 vs. TAIR 10
Match: AT4G38100.1 (unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.9 bits (211), Expect = 3.3e-17
Identity = 43/98 (43.88%), Postives = 65/98 (66.33%), Query Frame = 0 

Query: 66  ESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKILEL 125
           E     A E   D+K   D      ++LLYG GAIVA++L+S +V ++ ++PL PK++E+
Sbjct: 97  EDEETQALEFLNDIKLDSD---KTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEV 156

Query: 126 VGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           VGLGYT WF  RYLLFK +R+EL   +  +KK++ G++
Sbjct: 157 VGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]
BLAST of Tan0018744 vs. TAIR 10
Match: AT2G46820.1 (photosystem I P subunit )

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11
Identity = 42/160 (26.25%), Postives = 88/160 (55.00%), Query Frame = 0 

Query: 3   ATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTRAS 62
           A+AS ++ + +  P+L     +R +       ++V          ++ +R ++ +    +
Sbjct: 23  ASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVR---------NVVTRATTEVGEAPA 82

Query: 63  SSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKI 122
           ++ E+   +  E+    +E W+ +++K  +       +VA+W S+ ++ AI+ +PL+P +
Sbjct: 83  TTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGV 142

Query: 123 LELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGA 163
           LELVG+GYTGWF Y+ L+FK  R+ L + +++  K I G+
Sbjct: 143 LELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]
BLAST of Tan0018744 vs. TAIR 10
Match: AT2G46820.2 (photosystem I P subunit )

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11
Identity = 42/160 (26.25%), Postives = 88/160 (55.00%), Query Frame = 0 

Query: 3   ATASPTAATAVLRPSLTAPQPSRRSTVPLLPPRLVSPSFPTSLKLSLESRRSSLLQTRAS 62
           A+AS ++ + +  P+L     +R +       ++V          ++ +R ++ +    +
Sbjct: 23  ASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVR---------NVVTRATTEVGEAPA 82

Query: 63  SSEESSVADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLLPKI 122
           ++ E+   +  E+    +E W+ +++K  +       +VA+W S+ ++ AI+ +PL+P +
Sbjct: 83  TTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGV 142

Query: 123 LELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGA 163
           LELVG+GYTGWF Y+ L+FK  R+ L + +++  K I G+
Sbjct: 143 LELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

The following BLAST results are available for this feature:
BLAST of Tan0018744 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O046169.6e-4666.87Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
Q8LDD34.6e-1643.88Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
Q8LCA13.8e-1026.25Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
Q9M8121.2e-0832.41Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
Q119Z56.1e-0842.86Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=... [more]
BLAST of Tan0018744 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023539167.18.9e-7395.09protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
XP_022933676.14.4e-7294.48protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita moschata] >KAG6597... [more]
XP_022974634.15.8e-7293.87protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita maxima][more]
XP_023529055.14.9e-7194.48protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
XP_022980149.18.3e-7193.87protein CURVATURE THYLAKOID 1A, chloroplastic-like [Cucurbita maxima][more]
BLAST of Tan0018744 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EZQ92.1e-7294.48protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1II672.8e-7293.87protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1IYH54.0e-7193.87protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1E9V52.0e-7093.87protein CURVATURE THYLAKOID 1A, chloroplastic-like OS=Cucurbita moschata OX=3662... [more]
A0A5D3D0974.9e-6992.68Protein CURVATURE THYLAKOID 1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
BLAST of Tan0018744 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G01150.16.8e-4766.87unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G01150.22.6e-2258.20unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G38100.13.3e-1743.88unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 pl... [more]
AT2G46820.12.7e-1126.25photosystem I P subunit [more]
AT2G46820.22.7e-1126.25photosystem I P subunit [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 145..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availablePANTHERPTHR33222:SF31MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATEDcoord: 2..163
IPR025564Cyanobacterial aminoacyl-tRNA synthetase, CAAD domainPFAMPF14159CAADcoord: 78..161
e-value: 1.7E-30
score: 104.7
IPR033344Protein CURVATURE THYLAKOID 1PANTHERPTHR33222FAMILY NOT NAMEDcoord: 2..163

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0018744.1Tan0018744.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090391 granum assembly
biological_process GO:0097753 membrane bending
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009515 granal stacked thylakoid
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009579 thylakoid