Tan0018578 (gene) Snake gourd v1

Overview
NameTan0018578
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLEA_2 domain-containing protein
LocationLG08: 75666208 .. 75666930 (-)
RNA-Seq ExpressionTan0018578
SyntenyTan0018578
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAATAATAATGATGATGTTGCTATTCAACTCAATCGAGTTCCAAGTCAAGACAAAGGAGCGCGTCGGGTTGCCTTCTCCAATTCCCTTCCTAAACACCATACGACATCCGCCCATCACATCAAATTTTGTCCCCGATTGTTTGCTTGTTGCGCATGGATATGTCTTGGGGTGTTCGGAATTATTCTCACCCTGCTCATCCTTGGCGTAATATTTATGTCCTTCCTTCAATCAGGATTGCCAGAAATCACCGTAAGAATGTTGGACTTGTCCAATTTTGAGATTAAAAACTCCACAAATCAGAATGATGCTCTCCTGAATGCAAAAGTAGCGATGTCAATCGAGATAAAGAACAAGAATGACAAAATGGAGTTGAGTTATAGCGATATTGCGGTGAATCTGGTGTCAGAGGACGTGAAATTGGGCAAGAACGTGATTGCTGGTTTCTCTCATAATCCTGGAAATACCACATTGTTAAATGTAACGATGAATGTGGTTGGAGATTCCACAGATAGAGAGAATGCATTGCAACTAGAAGATGACAGAAAAAGGGTGCAAATGGATGTGCAGATCACAATGGAAGCTACAGTTGGTTTTCATCTTGGGATATTCAACCTGAACAAGGTGCCAATCCATGTAGCCTGTGATTTTCAACAATTTCTTCTTCTATATCGCACAAAGGAGCCCCCATGTAATATTAGAATGGTTCCCCCCAGGTAA

mRNA sequence

ATGAATAATAATAATGATGATGTTGCTATTCAACTCAATCGAGTTCCAAGTCAAGACAAAGGAGCGCGTCGGGTTGCCTTCTCCAATTCCCTTCCTAAACACCATACGACATCCGCCCATCACATCAAATTTTGTCCCCGATTGTTTGCTTGTTGCGCATGGATATGTCTTGGGGTGTTCGGAATTATTCTCACCCTGCTCATCCTTGGCGTAATATTTATGTCCTTCCTTCAATCAGGATTGCCAGAAATCACCGTAAGAATGTTGGACTTGTCCAATTTTGAGATTAAAAACTCCACAAATCAGAATGATGCTCTCCTGAATGCAAAAGTAGCGATGTCAATCGAGATAAAGAACAAGAATGACAAAATGGAGTTGAGTTATAGCGATATTGCGGTGAATCTGGTGTCAGAGGACGTGAAATTGGGCAAGAACGTGATTGCTGGTTTCTCTCATAATCCTGGAAATACCACATTGTTAAATGTAACGATGAATGTGGTTGGAGATTCCACAGATAGAGAGAATGCATTGCAACTAGAAGATGACAGAAAAAGGGTGCAAATGGATGTGCAGATCACAATGGAAGCTACAGTTGGTTTTCATCTTGGGATATTCAACCTGAACAAGGTGCCAATCCATGTAGCCTGTGATTTTCAACAATTTCTTCTTCTATATCGCACAAAGGAGCCCCCATGTAATATTAGAATGGTTCCCCCCAGGTAA

Coding sequence (CDS)

ATGAATAATAATAATGATGATGTTGCTATTCAACTCAATCGAGTTCCAAGTCAAGACAAAGGAGCGCGTCGGGTTGCCTTCTCCAATTCCCTTCCTAAACACCATACGACATCCGCCCATCACATCAAATTTTGTCCCCGATTGTTTGCTTGTTGCGCATGGATATGTCTTGGGGTGTTCGGAATTATTCTCACCCTGCTCATCCTTGGCGTAATATTTATGTCCTTCCTTCAATCAGGATTGCCAGAAATCACCGTAAGAATGTTGGACTTGTCCAATTTTGAGATTAAAAACTCCACAAATCAGAATGATGCTCTCCTGAATGCAAAAGTAGCGATGTCAATCGAGATAAAGAACAAGAATGACAAAATGGAGTTGAGTTATAGCGATATTGCGGTGAATCTGGTGTCAGAGGACGTGAAATTGGGCAAGAACGTGATTGCTGGTTTCTCTCATAATCCTGGAAATACCACATTGTTAAATGTAACGATGAATGTGGTTGGAGATTCCACAGATAGAGAGAATGCATTGCAACTAGAAGATGACAGAAAAAGGGTGCAAATGGATGTGCAGATCACAATGGAAGCTACAGTTGGTTTTCATCTTGGGATATTCAACCTGAACAAGGTGCCAATCCATGTAGCCTGTGATTTTCAACAATTTCTTCTTCTATATCGCACAAAGGAGCCCCCATGTAATATTAGAATGGTTCCCCCCAGGTAA

Protein sequence

MNNNNDDVAIQLNRVPSQDKGARRVAFSNSLPKHHTTSAHHIKFCPRLFACCAWICLGVFGIILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQNDALLNAKVAMSIEIKNKNDKMELSYSDIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDSTDRENALQLEDDRKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQFLLLYRTKEPPCNIRMVPPR
Homology
BLAST of Tan0018578 vs. NCBI nr
Match: XP_038895624.1 (uncharacterized protein LOC120083816 [Benincasa hispida])

HSP 1 Score: 345.1 bits (884), Expect = 4.8e-91
Identity = 173/239 (72.38%), Postives = 203/239 (84.94%), Query Frame = 0

Query: 5   NDDVAIQLNRVPSQDKGARRVAFSNSLPKHHTTSA-----HHIKFCPRLFACCAWICLGV 64
           N+  + QL+R+PSQ++G+RRVAFS SLP+H   S      H  K CPRLFACCAWICL V
Sbjct: 2   NNVASNQLDRLPSQNRGSRRVAFSESLPRHRAASGEGNSRHRSKCCPRLFACCAWICLVV 61

Query: 65  FGIILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQNDALLNAKVAMSIEIKN 124
           FGI+L +LILGVIFMSFLQSGLP+ITV+ML+LS FE  NSTNQN+ LLNAKV +SIE++N
Sbjct: 62  FGIVLAVLILGVIFMSFLQSGLPQITVKMLNLSKFETNNSTNQNNVLLNAKVDVSIEMRN 121

Query: 125 KNDKMELSYSDIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDSTDRENALQL 184
           KNDK+ELSYS+I VNL S+DVKLG++VI GF+H PGNTT  NVTMNVVG STD++N  QL
Sbjct: 122 KNDKIELSYSNIVVNLASDDVKLGRSVIPGFTHKPGNTTYFNVTMNVVGASTDKDNVSQL 181

Query: 185 EDDRKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQFLLLYRTKEPPCNIRMVP 239
           EDDRKRVQM+VQ+TME+TVGFH+GIFNLN VPIHVACDF+QFLLLYR  EPPCNIRM P
Sbjct: 182 EDDRKRVQMNVQVTMESTVGFHIGIFNLNDVPIHVACDFKQFLLLYRINEPPCNIRMFP 240

BLAST of Tan0018578 vs. NCBI nr
Match: XP_008457557.1 (PREDICTED: uncharacterized protein LOC103497223 [Cucumis melo] >KAA0059969.1 putative transmembrane protein [Cucumis melo var. makuwa] >TYJ97225.1 putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 340.1 bits (871), Expect = 1.5e-89
Identity = 176/241 (73.03%), Postives = 204/241 (84.65%), Query Frame = 0

Query: 5   NDDVAIQLNRVPSQDKGARRVAFSNSLPKHHT-----TSAHHIKFCPRLFACCAWICLGV 64
           N+  A +L+R+PSQ+KG+RRVAFS+SLPKH        S  H K CPRLFACCAWIC+G+
Sbjct: 2   NNIGANRLDRLPSQNKGSRRVAFSDSLPKHRAAFGDGNSERHNKCCPRLFACCAWICVGI 61

Query: 65  FGIILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQND--ALLNAKVAMSIEI 124
           FGI++ +LILGVIF+SFLQSGLPEITVRML+LSNFEIKNSTNQND  ALLNAK+ MSIE+
Sbjct: 62  FGIVVAILILGVIFVSFLQSGLPEITVRMLNLSNFEIKNSTNQNDNNALLNAKLDMSIEM 121

Query: 125 KNKNDKMELSYSDIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDSTDRENAL 184
           +NKN+K+ELSYS I VNLVSEDVKLG++VI  FSH+PGNTT LNVTMNV   STD++N  
Sbjct: 122 RNKNEKIELSYSSIVVNLVSEDVKLGRSVIPSFSHSPGNTTYLNVTMNVERVSTDKDNLS 181

Query: 185 QLEDDRKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQFLLLYRTKEPPCNIRMV 239
           QLEDDRK+VQMDVQ+ MEA VGFH+GIFNL  VPIHVACDFQQ LL+YR  EPPCNIRM 
Sbjct: 182 QLEDDRKKVQMDVQVKMEAKVGFHVGIFNLKNVPIHVACDFQQTLLVYRINEPPCNIRMF 241

BLAST of Tan0018578 vs. NCBI nr
Match: KAG6607382.1 (hypothetical protein SDJN03_00724, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318.2 bits (814), Expect = 6.3e-83
Identity = 166/238 (69.75%), Postives = 197/238 (82.77%), Query Frame = 0

Query: 4   NNDDVAIQLNRVPSQDKGARRVAFSNSLPKHHTTSAHHIKFC-PRLFACCAWICLGVFGI 63
           +N+ VAIQL+RVPS DKGARRVAFS+SLPKH +TS    KF   RLFA CAWICL VFGI
Sbjct: 3   DNNHVAIQLDRVPSTDKGARRVAFSDSLPKHRSTSLRATKFVFSRLFAFCAWICLAVFGI 62

Query: 64  ILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQNDALLNAKVAMSIEIKNKND 123
            +TLLILGVIF+SFLQSGLPEITV+MLDLS  +I+NSTNQN A+LN KV M+I+IKNKN+
Sbjct: 63  AITLLILGVIFVSFLQSGLPEITVKMLDLSKIQIQNSTNQNVAVLNTKVRMAIDIKNKNE 122

Query: 124 KMELSYSDIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDSTDRENALQLEDD 183
           K+ELSYSD+ + LVSE+++LG+NVI  FS  PGNTT LNVT+NV  DS DR++   LEDD
Sbjct: 123 KLELSYSDLNMKLVSENIELGRNVIPSFSQEPGNTTSLNVTLNVDRDSIDRDSISLLEDD 182

Query: 184 RKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQFLLLYRTKEPPCNIRMVPPR 241
           RK+ Q+ V+ITM  +VGFHLGIF LNKVPIHV C+FQQ+LLLYR KEPPC+I M P R
Sbjct: 183 RKKAQVVVKITMVGSVGFHLGIFKLNKVPIHVTCNFQQYLLLYRVKEPPCSITMFPTR 240

BLAST of Tan0018578 vs. NCBI nr
Match: XP_022949169.1 (uncharacterized protein LOC111452600 [Cucurbita moschata] >XP_023522969.1 uncharacterized protein LOC111787033 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-81
Identity = 164/238 (68.91%), Postives = 195/238 (81.93%), Query Frame = 0

Query: 4   NNDDVAIQLNRVPSQDKGARRVAFSNSLPKHHTTSAHHIKFC-PRLFACCAWICLGVFGI 63
           +N+ VAIQL+RVPS DKGARRVAFS+SLPKH +TS    KF    L A CAWICL VFGI
Sbjct: 3   DNNHVAIQLDRVPSTDKGARRVAFSDSLPKHRSTSLRATKFVFSHLLAFCAWICLAVFGI 62

Query: 64  ILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQNDALLNAKVAMSIEIKNKND 123
            +TLLILGVIF+SFLQSGLPEITV+MLDLS  +I+NSTNQN A+LN KV M+I+IKNKN+
Sbjct: 63  AITLLILGVIFVSFLQSGLPEITVKMLDLSKIQIQNSTNQNVAVLNTKVRMAIDIKNKNE 122

Query: 124 KMELSYSDIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDSTDRENALQLEDD 183
           K+ELSYSD+ + LVSE+++LG+NVI  FS  PGNTT LNVT+NV  DS DR++   LEDD
Sbjct: 123 KLELSYSDLNMKLVSENIELGRNVIPSFSQEPGNTTSLNVTLNVDRDSIDRDSISLLEDD 182

Query: 184 RKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQFLLLYRTKEPPCNIRMVPPR 241
           RK+ Q+ V+ITM  +VGFHLGIF LNKVPIHV C+FQQ+LLLYR KEPPC+I M P R
Sbjct: 183 RKKAQVVVKITMVGSVGFHLGIFKLNKVPIHVTCNFQQYLLLYRVKEPPCSITMFPTR 240

BLAST of Tan0018578 vs. NCBI nr
Match: XP_022998792.1 (uncharacterized protein LOC111493353 [Cucurbita maxima])

HSP 1 Score: 308.5 bits (789), Expect = 5.0e-80
Identity = 161/238 (67.65%), Postives = 193/238 (81.09%), Query Frame = 0

Query: 4   NNDDVAIQLNRVPSQDKGARRVAFSNSLPKHHTTSAHHIKFC-PRLFACCAWICLGVFGI 63
           +N+ VAIQL+RVPS DKGARRVAFS+SLPKH + S    KF    LFA CAWICL VFGI
Sbjct: 3   DNNHVAIQLDRVPSTDKGARRVAFSDSLPKHRSASLRATKFVFSHLFAFCAWICLAVFGI 62

Query: 64  ILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQNDALLNAKVAMSIEIKNKND 123
            +TLLILGVIF+SFLQS LPEITV+MLDLS  +I+NSTNQN A+LN KV M+I+I+NKN+
Sbjct: 63  AITLLILGVIFVSFLQSSLPEITVKMLDLSKIQIQNSTNQNVAVLNTKVRMAIDIRNKNE 122

Query: 124 KMELSYSDIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDSTDRENALQLEDD 183
           K+ELSYSD+ + LVSE+++LG+NVI  FS  PGNTT LNVT+ V  DS DR++   LEDD
Sbjct: 123 KLELSYSDLNMKLVSENIELGRNVIPSFSQEPGNTTSLNVTLKVDRDSIDRDSISLLEDD 182

Query: 184 RKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQFLLLYRTKEPPCNIRMVPPR 241
           RK+ Q+ V+ITM  +VGFHLGIF LNKVPIHV C+FQQ+LLLYR KEPPC+I M P R
Sbjct: 183 RKKAQVVVKITMVGSVGFHLGIFKLNKVPIHVTCNFQQYLLLYRVKEPPCSITMFPTR 240

BLAST of Tan0018578 vs. ExPASy TrEMBL
Match: A0A5A7V2C7 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00130 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 7.4e-90
Identity = 176/241 (73.03%), Postives = 204/241 (84.65%), Query Frame = 0

Query: 5   NDDVAIQLNRVPSQDKGARRVAFSNSLPKHHT-----TSAHHIKFCPRLFACCAWICLGV 64
           N+  A +L+R+PSQ+KG+RRVAFS+SLPKH        S  H K CPRLFACCAWIC+G+
Sbjct: 2   NNIGANRLDRLPSQNKGSRRVAFSDSLPKHRAAFGDGNSERHNKCCPRLFACCAWICVGI 61

Query: 65  FGIILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQND--ALLNAKVAMSIEI 124
           FGI++ +LILGVIF+SFLQSGLPEITVRML+LSNFEIKNSTNQND  ALLNAK+ MSIE+
Sbjct: 62  FGIVVAILILGVIFVSFLQSGLPEITVRMLNLSNFEIKNSTNQNDNNALLNAKLDMSIEM 121

Query: 125 KNKNDKMELSYSDIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDSTDRENAL 184
           +NKN+K+ELSYS I VNLVSEDVKLG++VI  FSH+PGNTT LNVTMNV   STD++N  
Sbjct: 122 RNKNEKIELSYSSIVVNLVSEDVKLGRSVIPSFSHSPGNTTYLNVTMNVERVSTDKDNLS 181

Query: 185 QLEDDRKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQFLLLYRTKEPPCNIRMV 239
           QLEDDRK+VQMDVQ+ MEA VGFH+GIFNL  VPIHVACDFQQ LL+YR  EPPCNIRM 
Sbjct: 182 QLEDDRKKVQMDVQVKMEAKVGFHVGIFNLKNVPIHVACDFQQTLLVYRINEPPCNIRMF 241

BLAST of Tan0018578 vs. ExPASy TrEMBL
Match: A0A1S3C5S1 (uncharacterized protein LOC103497223 OS=Cucumis melo OX=3656 GN=LOC103497223 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 7.4e-90
Identity = 176/241 (73.03%), Postives = 204/241 (84.65%), Query Frame = 0

Query: 5   NDDVAIQLNRVPSQDKGARRVAFSNSLPKHHT-----TSAHHIKFCPRLFACCAWICLGV 64
           N+  A +L+R+PSQ+KG+RRVAFS+SLPKH        S  H K CPRLFACCAWIC+G+
Sbjct: 2   NNIGANRLDRLPSQNKGSRRVAFSDSLPKHRAAFGDGNSERHNKCCPRLFACCAWICVGI 61

Query: 65  FGIILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQND--ALLNAKVAMSIEI 124
           FGI++ +LILGVIF+SFLQSGLPEITVRML+LSNFEIKNSTNQND  ALLNAK+ MSIE+
Sbjct: 62  FGIVVAILILGVIFVSFLQSGLPEITVRMLNLSNFEIKNSTNQNDNNALLNAKLDMSIEM 121

Query: 125 KNKNDKMELSYSDIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDSTDRENAL 184
           +NKN+K+ELSYS I VNLVSEDVKLG++VI  FSH+PGNTT LNVTMNV   STD++N  
Sbjct: 122 RNKNEKIELSYSSIVVNLVSEDVKLGRSVIPSFSHSPGNTTYLNVTMNVERVSTDKDNLS 181

Query: 185 QLEDDRKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQFLLLYRTKEPPCNIRMV 239
           QLEDDRK+VQMDVQ+ MEA VGFH+GIFNL  VPIHVACDFQQ LL+YR  EPPCNIRM 
Sbjct: 182 QLEDDRKKVQMDVQVKMEAKVGFHVGIFNLKNVPIHVACDFQQTLLVYRINEPPCNIRMF 241

BLAST of Tan0018578 vs. ExPASy TrEMBL
Match: A0A6J1GC15 (uncharacterized protein LOC111452600 OS=Cucurbita moschata OX=3662 GN=LOC111452600 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.7e-82
Identity = 164/238 (68.91%), Postives = 195/238 (81.93%), Query Frame = 0

Query: 4   NNDDVAIQLNRVPSQDKGARRVAFSNSLPKHHTTSAHHIKFC-PRLFACCAWICLGVFGI 63
           +N+ VAIQL+RVPS DKGARRVAFS+SLPKH +TS    KF    L A CAWICL VFGI
Sbjct: 3   DNNHVAIQLDRVPSTDKGARRVAFSDSLPKHRSTSLRATKFVFSHLLAFCAWICLAVFGI 62

Query: 64  ILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQNDALLNAKVAMSIEIKNKND 123
            +TLLILGVIF+SFLQSGLPEITV+MLDLS  +I+NSTNQN A+LN KV M+I+IKNKN+
Sbjct: 63  AITLLILGVIFVSFLQSGLPEITVKMLDLSKIQIQNSTNQNVAVLNTKVRMAIDIKNKNE 122

Query: 124 KMELSYSDIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDSTDRENALQLEDD 183
           K+ELSYSD+ + LVSE+++LG+NVI  FS  PGNTT LNVT+NV  DS DR++   LEDD
Sbjct: 123 KLELSYSDLNMKLVSENIELGRNVIPSFSQEPGNTTSLNVTLNVDRDSIDRDSISLLEDD 182

Query: 184 RKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQFLLLYRTKEPPCNIRMVPPR 241
           RK+ Q+ V+ITM  +VGFHLGIF LNKVPIHV C+FQQ+LLLYR KEPPC+I M P R
Sbjct: 183 RKKAQVVVKITMVGSVGFHLGIFKLNKVPIHVTCNFQQYLLLYRVKEPPCSITMFPTR 240

BLAST of Tan0018578 vs. ExPASy TrEMBL
Match: A0A6J1K8Y2 (uncharacterized protein LOC111493353 OS=Cucurbita maxima OX=3661 GN=LOC111493353 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.4e-80
Identity = 161/238 (67.65%), Postives = 193/238 (81.09%), Query Frame = 0

Query: 4   NNDDVAIQLNRVPSQDKGARRVAFSNSLPKHHTTSAHHIKFC-PRLFACCAWICLGVFGI 63
           +N+ VAIQL+RVPS DKGARRVAFS+SLPKH + S    KF    LFA CAWICL VFGI
Sbjct: 3   DNNHVAIQLDRVPSTDKGARRVAFSDSLPKHRSASLRATKFVFSHLFAFCAWICLAVFGI 62

Query: 64  ILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQNDALLNAKVAMSIEIKNKND 123
            +TLLILGVIF+SFLQS LPEITV+MLDLS  +I+NSTNQN A+LN KV M+I+I+NKN+
Sbjct: 63  AITLLILGVIFVSFLQSSLPEITVKMLDLSKIQIQNSTNQNVAVLNTKVRMAIDIRNKNE 122

Query: 124 KMELSYSDIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDSTDRENALQLEDD 183
           K+ELSYSD+ + LVSE+++LG+NVI  FS  PGNTT LNVT+ V  DS DR++   LEDD
Sbjct: 123 KLELSYSDLNMKLVSENIELGRNVIPSFSQEPGNTTSLNVTLKVDRDSIDRDSISLLEDD 182

Query: 184 RKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQFLLLYRTKEPPCNIRMVPPR 241
           RK+ Q+ V+ITM  +VGFHLGIF LNKVPIHV C+FQQ+LLLYR KEPPC+I M P R
Sbjct: 183 RKKAQVVVKITMVGSVGFHLGIFKLNKVPIHVTCNFQQYLLLYRVKEPPCSITMFPTR 240

BLAST of Tan0018578 vs. ExPASy TrEMBL
Match: A0A6J1E0W1 (uncharacterized protein LOC111024923 OS=Momordica charantia OX=3673 GN=LOC111024923 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.1e-69
Identity = 144/232 (62.07%), Postives = 178/232 (76.72%), Query Frame = 0

Query: 12  LNRVPSQDKGARRVAFSNSLPKHHTTSAHHIKFCPRLFACCAWICLGVFGIILTLLILGV 71
           +N   ++DKG RRV FS SLP H  TS    K   RLFA C  IC+G FGI+L LLI+ V
Sbjct: 1   MNNNYNEDKGERRVYFSESLPTHRATSDSGTKCRRRLFAYCGRICIGAFGILLALLIIAV 60

Query: 72  IFMSFLQSGLPEITVRMLDLSNFEIKNSTNQ--NDALLNAKVAMSIEIKNKNDKMELSYS 131
           IFMSFLQSGLPEI+++ L LS FEI +STNQ  N+A+L+A+V +S+ ++NKNDK+ELSY 
Sbjct: 61  IFMSFLQSGLPEISIKTLQLSKFEIHDSTNQNHNNAVLDARVDISMTVRNKNDKIELSYG 120

Query: 132 DIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDSTDRENALQLEDDRKRVQMD 191
           DI VN+ S+DVKLGK+VI GFSH PGNTT LNVT NVVGD  DRENAL++++++KRV+M 
Sbjct: 121 DIVVNVASDDVKLGKSVIGGFSHGPGNTTYLNVTTNVVGDGVDRENALEIQEEKKRVEMV 180

Query: 192 VQITMEATVGFHLGIFNLNKVPIHVAC-DFQQFLLLYRTKEPPCNIRMVPPR 241
            Q+ MEA +GFH GIF++ KVPIHV C D QQFLL+ R KE  CNIRM P R
Sbjct: 181 AQVRMEAIIGFHAGIFSIEKVPIHVRCDDVQQFLLVNRIKEASCNIRMFPFR 232

BLAST of Tan0018578 vs. TAIR 10
Match: AT2G30505.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 79.3 bits (194), Expect = 4.6e-15
Identity = 51/186 (27.42%), Postives = 98/186 (52.69%), Query Frame = 0

Query: 51  CCAWICLGVFGIILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQNDALLNAK 110
           CCA  C+ V  +++ +L++G+   S ++S LP++ V  L  S  +I  S+   D L+NA 
Sbjct: 136 CCACTCMFVSVVLIIVLLVGLSANSSIKSILPQVLVTNLKFSRLDIAKSS--TDLLMNAN 195

Query: 111 VAMSIEIKNKNDKMELSYSDIAVNLVSEDVKLGKNVIAGFSHNPGNTTLLNVTMNVVGDS 170
           +   +++ N NDK  L YS +  ++ SE++ LGK  ++GF  +PGN T L +   +    
Sbjct: 196 LNTVLQLSNNNDKTVLYYSPMKADISSENINLGKKTLSGFKQDPGNVTSLKILTRLRKSK 255

Query: 171 TDRENALQLEDDRKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQFLLLYRTKEP 230
               +A  L +  K ++  V + +   +      F ++ +PI +AC+  +   +    +P
Sbjct: 256 VYDVDATLLTNKEKTLEALVDVFLRGKLSVDWLGFKVH-IPIVIACESVKQSDVINGLKP 315

Query: 231 PCNIRM 237
            C++R+
Sbjct: 316 ACDVRI 318

BLAST of Tan0018578 vs. TAIR 10
Match: AT4G01110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01453.1); Has 273 Blast hits to 272 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 273; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 3.4e-10
Identity = 52/197 (26.40%), Postives = 91/197 (46.19%), Query Frame = 0

Query: 47  RLFACCAWICLGVFGIILTLLILGVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQNDAL 106
           R+F CC  +C+ V  +IL L++   +F  +    LP + +    +SNF         D L
Sbjct: 62  RVFCCC--VCITVAIVILLLILTVSVFFLYYSPRLPVVRLSSFRVSNFNFSGG-KAGDGL 121

Query: 107 --LNAKVAMSIEIKNKNDKMELSYS--DIAVNLVSED--VKLGKNVIAGFSHNPGNTTLL 166
             L A+    ++ +N N K+   Y   D+AV++  +D    LG   + GF   PGN T++
Sbjct: 122 SQLTAEATARLDFRNPNGKLRYYYGNVDVAVSVGEDDFETSLGSTKVKGFVEKPGNRTVV 181

Query: 167 NVTMNVVGDSTDRENALQLEDDRKRVQMDVQITMEATVGFHLGIFNLNKVPIHVACDFQQ 226
            V + V     D     +L  D K  ++ V++  +  VG  +G   +  V + ++C   +
Sbjct: 182 IVPIKVKKQQVDDPTVKRLRADMKSKKLVVKVMAKTKVGLGVGRRKIVTVGVTISCGGVR 241

Query: 227 FLLLYRTKEPPCNIRMV 238
              L  +K   C I+M+
Sbjct: 242 LQTL-DSKMSKCTIKML 254

BLAST of Tan0018578 vs. TAIR 10
Match: AT1G17620.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 55.5 bits (132), Expect = 7.0e-08
Identity = 51/178 (28.65%), Postives = 83/178 (46.63%), Query Frame = 0

Query: 51  CCAWICLGVFGIILTLLIL----GVIFMSFLQSGLPEITVRMLDLSNFEIKNSTNQNDAL 110
           CC   C  +F IIL LLI+     V+++ + +   P  TV  L +S     ++       
Sbjct: 58  CCRCCCWTIFVIILLLLIVAAASAVVYLIY-RPQRPSFTVSELKISTLNFTSAVR----- 117

Query: 111 LNAKVAMSIEIKNKNDKMELSY--SDIAVNLVS----EDVKLGKNVIAGFSHNPGNTTLL 170
           L   +++S+  +N N  +   Y  +DI +   S    +DV +GK  IA FSH   NTT L
Sbjct: 118 LTTAISLSVIARNPNKNVGFIYDVTDITLYKASTGGDDDVVIGKGTIAAFSHGKKNTTTL 177

Query: 171 NVTMNVVGDSTDRENALQLEDDRK-RVQMDVQITMEATVGFHLGIFNLNKVPIHVACD 218
             T+    D  D  +A +L+ D K +  + ++I + + V   +G     K  I V C+
Sbjct: 178 RSTIGSPPDELDEISAGKLKGDLKAKKAVAIKIVLNSKVKVKMGALKTPKSGIRVTCE 229

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038895624.14.8e-9172.38uncharacterized protein LOC120083816 [Benincasa hispida][more]
XP_008457557.11.5e-8973.03PREDICTED: uncharacterized protein LOC103497223 [Cucumis melo] >KAA0059969.1 put... [more]
KAG6607382.16.3e-8369.75hypothetical protein SDJN03_00724, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022949169.11.2e-8168.91uncharacterized protein LOC111452600 [Cucurbita moschata] >XP_023522969.1 unchar... [more]
XP_022998792.15.0e-8067.65uncharacterized protein LOC111493353 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A5A7V2C77.4e-9073.03Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3C5S17.4e-9073.03uncharacterized protein LOC103497223 OS=Cucumis melo OX=3656 GN=LOC103497223 PE=... [more]
A0A6J1GC155.7e-8268.91uncharacterized protein LOC111452600 OS=Cucurbita moschata OX=3662 GN=LOC1114526... [more]
A0A6J1K8Y22.4e-8067.65uncharacterized protein LOC111493353 OS=Cucurbita maxima OX=3661 GN=LOC111493353... [more]
A0A6J1E0W11.1e-6962.07uncharacterized protein LOC111024923 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
Match NameE-valueIdentityDescription
AT2G30505.14.6e-1527.42Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G01110.13.4e-1026.40unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G17620.17.0e-0828.65Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31234LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 30..237
NoneNo IPR availablePANTHERPTHR31234:SF32LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 30..237

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0018578.1Tan0018578.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane