Tan0018496 (gene) Snake gourd v1

Overview


Name	Tan0018496
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Sterol regulatory element-binding protein cleavage-activating protein, putative
Location	LG01: 1747526 .. 1748367 (+)
RNA-Seq Expression	Tan0018496
Synteny	Tan0018496

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACATTGCAATTATCAAATATCAAAAAATATCTTTTCGATGATGGAAATTGAAACACCACCGTTCGCCTCATAAAAAGCTTTGGGATAAGATTTCCGGCGATAAAACAAACAGAAGCGAAACCAAGTCGCCATGAAAACTCTGGTGTGTTCCTTTCGTCAAGCTCTCGACCTCTCGAATCCTCCGCCATGGAAACAAAGAAGCCGAATCAACGAGTCAGCAATAACGAAGAATCTCATTATTTTCACAAGAACATCCAGAGGCCAAGTCCAAGTAAACGCCAAGGGTTTCACAGGTTCTCCGGCGACGGCGAAAGACACAGAAACCGCAAAGAAAAAACTCTCTGGCCAAAACAGCCGCAAAGACGACGGCGGCGACGACGACGAACTTCCAGAGGCCGTAGCCAAGAGGATCATAACTAGAATCTTGGCTTTCGTCGGAATTCCGATGGCGTTCGGTTTGACATTGCTGAAGATTTTGGAGGCAATCAAGGTGCAGAATCTTTGGGATGTGCCGATTTGGCTGCCATTTTTGATGATTTTTTTGACATTTGGAGCTTCGACGATGGGAATTGCTTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGACTCTGTTTGGGTGGGAAGAGGCGCAGGAGAATTGGGTTGAGATGTGGAAGGAGGAAGACGAAGCCAATCGCCGAGGAAACTAATTGGCTCTGTTTGGTTACGAAGATATCATATCCCCGGATAAGTCTGCTCCGTTTAAATACCGGTAATGTAGACAACTGCATAAATGAAATGACTATATAATTTGTGATTTTTACTTCCCAATATGACTTCTGTTTGGATA

mRNA sequence

AAACATTGCAATTATCAAATATCAAAAAATATCTTTTCGATGATGGAAATTGAAACACCACCGTTCGCCTCATAAAAAGCTTTGGGATAAGATTTCCGGCGATAAAACAAACAGAAGCGAAACCAAGTCGCCATGAAAACTCTGGTGTGTTCCTTTCGTCAAGCTCTCGACCTCTCGAATCCTCCGCCATGGAAACAAAGAAGCCGAATCAACGAGTCAGCAATAACGAAGAATCTCATTATTTTCACAAGAACATCCAGAGGCCAAGTCCAAGTAAACGCCAAGGGTTTCACAGGTTCTCCGGCGACGGCGAAAGACACAGAAACCGCAAAGAAAAAACTCTCTGGCCAAAACAGCCGCAAAGACGACGGCGGCGACGACGACGAACTTCCAGAGGCCGTAGCCAAGAGGATCATAACTAGAATCTTGGCTTTCGTCGGAATTCCGATGGCGTTCGGTTTGACATTGCTGAAGATTTTGGAGGCAATCAAGGTGCAGAATCTTTGGGATGTGCCGATTTGGCTGCCATTTTTGATGATTTTTTTGACATTTGGAGCTTCGACGATGGGAATTGCTTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGACTCTGTTTGGGTGGGAAGAGGCGCAGGAGAATTGGGTTGAGATGTGGAAGGAGGAAGACGAAGCCAATCGCCGAGGAAACTAATTGGCTCTGTTTGGTTACGAAGATATCATATCCCCGGATAAGTCTGCTCCGTTTAAATACCGGTAATGTAGACAACTGCATAAATGAAATGACTATATAATTTGTGATTTTTACTTCCCAATATGACTTCTGTTTGGATA

Coding sequence (CDS)

ATGAAAACTCTGGTGTGTTCCTTTCGTCAAGCTCTCGACCTCTCGAATCCTCCGCCATGGAAACAAAGAAGCCGAATCAACGAGTCAGCAATAACGAAGAATCTCATTATTTTCACAAGAACATCCAGAGGCCAAGTCCAAGTAAACGCCAAGGGTTTCACAGGTTCTCCGGCGACGGCGAAAGACACAGAAACCGCAAAGAAAAAACTCTCTGGCCAAAACAGCCGCAAAGACGACGGCGGCGACGACGACGAACTTCCAGAGGCCGTAGCCAAGAGGATCATAACTAGAATCTTGGCTTTCGTCGGAATTCCGATGGCGTTCGGTTTGACATTGCTGAAGATTTTGGAGGCAATCAAGGTGCAGAATCTTTGGGATGTGCCGATTTGGCTGCCATTTTTGATGATTTTTTTGACATTTGGAGCTTCGACGATGGGAATTGCTTACGGGACGTTATCGGCGAGTTTGGATCCGGAGAAGGAAGGGACTCTGTTTGGGTGGGAAGAGGCGCAGGAGAATTGGGTTGAGATGTGGAAGGAGGAAGACGAAGCCAATCGCCGAGGAAACTAA

Protein sequence

MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATAKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILEAIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKEEDEANRRGN

Homology

[Close]

BLAST of Tan0018496 vs. ExPASy Swiss-Prot
Match: Q9LTD9 (Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.0e-27
Identity = 72/184 (39.13%), Postives = 110/184 (59.78%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNA--KGFTGSPA 60
           M+ L+CS R  L LS+      R+ +   +     +      R + +++A  KGF  S  
Sbjct: 1   MRALLCSHR-LLPLSS----LSRTTVKTKSHNPKTLYPNNKPRWESKLHAGPKGFQSS-- 60

Query: 61  TAKDTETAKKKLSGQNSRKD-DGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILE 120
                     + S +  R D D  DD  +P+ V +R++ RI+  VG P+  G+ +LK+LE
Sbjct: 61  ----------RTSEKPGRPDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLE 120

Query: 121 AIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEM 180
            +K +N+WDVP+W+P+L   +TFG+S +GIAYG+LS +LDP K  +LFG +EA+ENWVEM
Sbjct: 121 VLKDRNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEM 167

Query: 181 WKEE 182
           WKE+
Sbjct: 181 WKED 167

[Close]

BLAST of Tan0018496 vs. ExPASy Swiss-Prot
Match: O49668 (Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.0e-19
Identity = 61/172 (35.47%), Postives = 94/172 (54.65%), Query Frame = 0


Query: 21  KQRSRINESAITKNLIIFTRTSRGQVQVNA-KGFTGSPATAKDTETAKKKLSGQNSRKDD 80
           K +S++ +S    N +  +R +     +N+ KGF   P   K T+ +KK   G  S +DD
Sbjct: 37  KTKSQVPKSITCINRLEISRIAPLHATMNSPKGFGPPP---KKTKKSKKPKPGNQSDEDD 96

Query: 81  G----GDDDE--------LPEAVAKRIITRILAFVGIPMAFGLTLLKILEAIKVQNLWDV 140
                 DDDE        +PE V  R+I+R+   VG+P+  GL        +KV    DV
Sbjct: 97  DDEDEDDDDEEDERERGVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDV 156

Query: 141 PIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWK 180
           P W+PF++ F+ FG +  G++YG +S+S DP +EG+L GW EA++NW   W+
Sbjct: 157 PTWVPFIVSFVFFGTALAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQ 205

[Close]

BLAST of Tan0018496 vs. NCBI nr
Match: KAG7013265.1 (putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.4 bits (812), Expect = 8.4e-83
Identity = 158/189 (83.60%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATA 60
           MK LVCSFR ALDLS PPPWKQRSRI++S  TKNL IFTRTSRGQ+Q+NAKGFTGSPATA
Sbjct: 1   MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILEAIK 120
           KD ETA KK SGQN+ +D GG DDE+PEAVAKRIITRILAFVGIPMAFG+TL+KILEA+ 
Sbjct: 61  KDRETAVKKPSGQNNSRDGGGGDDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEAVH 120

Query: 121 VQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKE 180
            Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKE
Sbjct: 121 EQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKE 180

Query: 181 EDEANRRGN 190
           EDEANR GN
Sbjct: 181 EDEANRGGN 189

[Close]

BLAST of Tan0018496 vs. NCBI nr
Match: XP_022944901.1 (uncharacterized protein PAM68-like [Cucurbita moschata])

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82
Identity = 157/189 (83.07%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATA 60
           MK LVCSFR AL LS PPPWKQRSRI++S  TKNL IFTRTSRGQ+Q+NAKGFTGSPATA
Sbjct: 1   MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILEAIK 120
           KD ETA KK SGQN+ +D GGDDDE+PEAVAKRIITRILAFVG+PMAFG+TL+KILEA+ 
Sbjct: 61  KDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEAVH 120

Query: 121 VQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKE 180
            Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKE
Sbjct: 121 EQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKE 180

Query: 181 EDEANRRGN 190
           EDEANR GN
Sbjct: 181 EDEANRGGN 189

[Close]

BLAST of Tan0018496 vs. NCBI nr
Match: XP_023541387.1 (uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.3 bits (804), Expect = 7.1e-82
Identity = 159/190 (83.68%), Postives = 170/190 (89.47%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATA 60
           MK LVCSFR ALDLS PPPWKQRSRI++S  TKNL IFTRTSRGQ+Q+NAKGFTGSPATA
Sbjct: 1   MKALVCSFRHALDLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDTETAKKKLSGQ-NSRKDDGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILEAI 120
           KD ETA KK SGQ NSR   GGDDDE+PEAVAKRIITRILAFVG+PMAFG+TL+KILEA+
Sbjct: 61  KDRETAVKKPSGQNNSRGGGGGDDDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEAV 120

Query: 121 KVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWK 180
             Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWK
Sbjct: 121 HEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWK 180

Query: 181 EEDEANRRGN 190
           EEDEANR GN
Sbjct: 181 EEDEANRGGN 190

[Close]

BLAST of Tan0018496 vs. NCBI nr
Match: KAG6574203.1 (putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.4 bits (799), Expect = 2.7e-81
Identity = 158/191 (82.72%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATA 60
           MK LVCSFR AL LS PPPWKQRSRI++S  TKNL IFTRTSRGQ+Q+NAKGFTGSPATA
Sbjct: 1   MKALVCSFRHALHLSKPPPWKQRSRIDDSTATKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDTETAKKKLSGQNSRKDDGG--DDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILEA 120
           KD ETA KK SGQN+ +D GG  DDDE+PEAVAKRIITRILAFVGIPMAFG+TL+KILEA
Sbjct: 61  KDRETAVKKPSGQNNSRDGGGGDDDDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEA 120

Query: 121 IKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMW 180
           +  Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMW
Sbjct: 121 VHEQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMW 180

Query: 181 KEEDEANRRGN 190
           KEEDEANR GN
Sbjct: 181 KEEDEANRGGN 191

[Close]

BLAST of Tan0018496 vs. NCBI nr
Match: XP_022968628.1 (uncharacterized protein PAM68-like [Cucurbita maxima])

HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80
Identity = 156/189 (82.54%), Postives = 169/189 (89.42%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATA 60
           MK LVCSFR ALDLS PPPWKQRSRI+ S  TKNL +FT TSRGQ+Q+NAKGFTGSPATA
Sbjct: 1   MKALVCSFRHALDLSKPPPWKQRSRIDNSTTTKNLRVFTGTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILEAIK 120
           KD ETA KKLS QN+ + DGGDDDE+PEAVAKRIITRILAFVGIPMAFG+TL+KILEA+ 
Sbjct: 61  KDRETAVKKLSDQNNSR-DGGDDDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEAVH 120

Query: 121 VQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKE 180
            Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKE
Sbjct: 121 EQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKE 180

Query: 181 EDEANRRGN 190
           EDEANR G+
Sbjct: 181 EDEANRGGD 188

[Close]

BLAST of Tan0018496 vs. ExPASy TrEMBL
Match: A0A6J1FZC0 (uncharacterized protein PAM68-like OS=Cucurbita moschata OX=3662 GN=LOC111449293 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.3e-83
Identity = 157/189 (83.07%), Postives = 170/189 (89.95%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATA 60
           MK LVCSFR AL LS PPPWKQRSRI++S  TKNL IFTRTSRGQ+Q+NAKGFTGSPATA
Sbjct: 1   MKALVCSFRHALHLSKPPPWKQRSRIDDSTTTKNLRIFTRTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILEAIK 120
           KD ETA KK SGQN+ +D GGDDDE+PEAVAKRIITRILAFVG+PMAFG+TL+KILEA+ 
Sbjct: 61  KDRETAVKKPSGQNNSRDGGGDDDEIPEAVAKRIITRILAFVGVPMAFGVTLVKILEAVH 120

Query: 121 VQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKE 180
            Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKE
Sbjct: 121 EQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKE 180

Query: 181 EDEANRRGN 190
           EDEANR GN
Sbjct: 181 EDEANRGGN 189

[Close]

BLAST of Tan0018496 vs. ExPASy TrEMBL
Match: A0A6J1HYL3 (uncharacterized protein PAM68-like OS=Cucurbita maxima OX=3661 GN=LOC111467790 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.5e-81
Identity = 156/189 (82.54%), Postives = 169/189 (89.42%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATA 60
           MK LVCSFR ALDLS PPPWKQRSRI+ S  TKNL +FT TSRGQ+Q+NAKGFTGSPATA
Sbjct: 1   MKALVCSFRHALDLSKPPPWKQRSRIDNSTTTKNLRVFTGTSRGQIQLNAKGFTGSPATA 60

Query: 61  KDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILEAIK 120
           KD ETA KKLS QN+ + DGGDDDE+PEAVAKRIITRILAFVGIPMAFG+TL+KILEA+ 
Sbjct: 61  KDRETAVKKLSDQNNSR-DGGDDDEIPEAVAKRIITRILAFVGIPMAFGVTLVKILEAVH 120

Query: 121 VQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKE 180
            Q LW VPIWLPFL IFLTFGASTMGIAYGTLS SLDPEKEGTLFGW+EAQ+NWVEMWKE
Sbjct: 121 EQKLWHVPIWLPFLTIFLTFGASTMGIAYGTLSTSLDPEKEGTLFGWDEAQKNWVEMWKE 180

Query: 181 EDEANRRGN 190
           EDEANR G+
Sbjct: 181 EDEANRGGD 188

[Close]

BLAST of Tan0018496 vs. ExPASy TrEMBL
Match: A0A6J1CGP3 (uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC111011500 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.5e-72
Identity = 139/186 (74.73%), Postives = 160/186 (86.02%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNAKGFTGSPATA 60
           MK L+CS+RQAL LS PPPWK RSRIN+S ITKNL   +R +RG V+VNAKGFTG+PATA
Sbjct: 1   MKALLCSYRQALHLSEPPPWKPRSRINDSTITKNLTNLSRIARGDVRVNAKGFTGTPATA 60

Query: 61  KDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILEAIK 120
           K+ E A +K+SGQN+  +D  DDDE+ EAV+ RIITRILAFVG+PMAFG+ LLKI E IK
Sbjct: 61  KEREAAARKISGQNNSSND--DDDEISEAVSNRIITRILAFVGVPMAFGVALLKIFETIK 120

Query: 121 VQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWKE 180
            Q +WDVPIWLPFL  FLTFGAST+GIAYGTLSASLDPEKEG+LFGWEEAQ+NWVEMWKE
Sbjct: 121 EQKVWDVPIWLPFLTTFLTFGASTIGIAYGTLSASLDPEKEGSLFGWEEAQKNWVEMWKE 180

Query: 181 EDEANR 187
           EDEA+R
Sbjct: 181 EDEASR 184

[Close]

BLAST of Tan0018496 vs. ExPASy TrEMBL
Match: A0A5A7STB5 (Putative Sterol regulatory element-binding protein cleavage-activating protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001970 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.6e-69
Identity = 142/187 (75.94%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRS-RINESAITKNLIIFTRTSRGQVQVNAKGFTGSPAT 60
           MK+  CSFRQAL L  PPP  QR+  IN+S ITKNL  FT TSRGQVQVNAKGFTGSPAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  AKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILEAI 120
           AK+ ETA K LSGQN+ +D   DDDE+PEAV  RIITRILAFVGIPMAFG+TLLKI +AI
Sbjct: 61  AKNRETAAKNLSGQNNNED---DDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAI 120

Query: 121 KVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWK 180
           K QNLWDVPIW+PF   FLTFGASTMGIAYGTLS SLDPEK+G++ GWEEAQ+NWVEMWK
Sbjct: 121 KEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWK 180

Query: 181 EEDEANR 187
           EEDE +R
Sbjct: 181 EEDEVSR 184

[Close]

BLAST of Tan0018496 vs. ExPASy TrEMBL
Match: A0A1S3AZ57 (uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.6e-69
Identity = 142/187 (75.94%), Postives = 157/187 (83.96%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRS-RINESAITKNLIIFTRTSRGQVQVNAKGFTGSPAT 60
           MK+  CSFRQAL L  PPP  QR+  IN+S ITKNL  FT TSRGQVQVNAKGFTGSPAT
Sbjct: 1   MKSFGCSFRQALLLPKPPPRNQRTVIINDSTITKNLSNFTTTSRGQVQVNAKGFTGSPAT 60

Query: 61  AKDTETAKKKLSGQNSRKDDGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILEAI 120
           AK+ ETA K LSGQN+ +D   DDDE+PEAV  RIITRILAFVGIPMAFG+TLLKI +AI
Sbjct: 61  AKNRETAAKNLSGQNNNED---DDDEIPEAVYSRIITRILAFVGIPMAFGVTLLKIFQAI 120

Query: 121 KVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWK 180
           K QNLWDVPIW+PF   FLTFGASTMGIAYGTLS SLDPEK+G++ GWEEAQ+NWVEMWK
Sbjct: 121 KEQNLWDVPIWVPFFTTFLTFGASTMGIAYGTLSTSLDPEKKGSVMGWEEAQKNWVEMWK 180

Query: 181 EEDEANR 187
           EEDE +R
Sbjct: 181 EEDEVSR 184

[Close]

BLAST of Tan0018496 vs. TAIR 10
Match: AT5G52780.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-28
Identity = 72/184 (39.13%), Postives = 110/184 (59.78%), Query Frame = 0


Query: 1   MKTLVCSFRQALDLSNPPPWKQRSRINESAITKNLIIFTRTSRGQVQVNA--KGFTGSPA 60
           M+ L+CS R  L LS+      R+ +   +     +      R + +++A  KGF  S  
Sbjct: 1   MRALLCSHR-LLPLSS----LSRTTVKTKSHNPKTLYPNNKPRWESKLHAGPKGFQSS-- 60

Query: 61  TAKDTETAKKKLSGQNSRKD-DGGDDDELPEAVAKRIITRILAFVGIPMAFGLTLLKILE 120
                     + S +  R D D  DD  +P+ V +R++ RI+  VG P+  G+ +LK+LE
Sbjct: 61  ----------RTSEKPGRPDPDPEDDPPIPQEVFERMMGRIVVSVGTPLGLGVAILKVLE 120

Query: 121 AIKVQNLWDVPIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEM 180
            +K +N+WDVP+W+P+L   +TFG+S +GIAYG+LS +LDP K  +LFG +EA+ENWVEM
Sbjct: 121 VLKDRNVWDVPLWVPYLTTLVTFGSSALGIAYGSLSTNLDPAKTNSLFGLKEAKENWVEM 167

Query: 181 WKEE 182
           WKE+
Sbjct: 181 WKED 167

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BLAST of Tan0018496 vs. TAIR 10
Match: AT4G19100.1 (Protein of unknown function (DUF3464) )

HSP 1 Score: 96.3 bits (238), Expect = 2.8e-20
Identity = 61/172 (35.47%), Postives = 94/172 (54.65%), Query Frame = 0


Query: 21  KQRSRINESAITKNLIIFTRTSRGQVQVNA-KGFTGSPATAKDTETAKKKLSGQNSRKDD 80
           K +S++ +S    N +  +R +     +N+ KGF   P   K T+ +KK   G  S +DD
Sbjct: 37  KTKSQVPKSITCINRLEISRIAPLHATMNSPKGFGPPP---KKTKKSKKPKPGNQSDEDD 96

Query: 81  G----GDDDE--------LPEAVAKRIITRILAFVGIPMAFGLTLLKILEAIKVQNLWDV 140
                 DDDE        +PE V  R+I+R+   VG+P+  GL        +KV    DV
Sbjct: 97  DDEDEDDDDEEDERERGVIPEIVTNRMISRMGFTVGLPLFIGLLFFPFFYYLKVGLKVDV 156

Query: 141 PIWLPFLMIFLTFGASTMGIAYGTLSASLDPEKEGTLFGWEEAQENWVEMWK 180
           P W+PF++ F+ FG +  G++YG +S+S DP +EG+L GW EA++NW   W+
Sbjct: 157 PTWVPFIVSFVFFGTALAGVSYGIVSSSWDPLREGSLLGWNEAKKNWPVFWQ 205

The following BLAST results are available for this feature:

BLAST of Tan0018496 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTD9	4.0e-27	39.13	Uncharacterized protein PAM68-like OS=Arabidopsis thaliana OX=3702 GN=At5g52780 ...	[more]
O49668	4.0e-19	35.47	Protein PAM68, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM68 PE=1 SV=1	[more]

BLAST of Tan0018496 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013265.1	8.4e-83	83.60	putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_022944901.1	1.1e-82	83.07	uncharacterized protein PAM68-like [Cucurbita moschata]	[more]
XP_023541387.1	7.1e-82	83.68	uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo]	[more]
KAG6574203.1	2.7e-81	82.72	putative protein PAM68-like protein, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022968628.1	1.3e-80	82.54	uncharacterized protein PAM68-like [Cucurbita maxima]	[more]

BLAST of Tan0018496 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZC0	5.3e-83	83.07	uncharacterized protein PAM68-like OS=Cucurbita moschata OX=3662 GN=LOC111449293...	[more]
A0A6J1HYL3	6.5e-81	82.54	uncharacterized protein PAM68-like OS=Cucurbita maxima OX=3661 GN=LOC111467790 P...	[more]
A0A6J1CGP3	5.5e-72	74.73	uncharacterized protein PAM68-like OS=Momordica charantia OX=3673 GN=LOC11101150...	[more]
A0A5A7STB5	2.6e-69	75.94	Putative Sterol regulatory element-binding protein cleavage-activating protein O...	[more]
A0A1S3AZ57	2.6e-69	75.94	uncharacterized protein PAM68-like OS=Cucumis melo OX=3656 GN=LOC103484134 PE=4 ...	[more]

BLAST of Tan0018496 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52780.1	2.8e-28	39.13	Protein of unknown function (DUF3464)	[more]
AT4G19100.1	2.8e-20	35.47	Protein of unknown function (DUF3464)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021855	PAM68-like	PFAM	PF11947	DUF3464	coord: 59..180 e-value: 1.0E-37 score: 129.2
IPR021855	PAM68-like	PANTHER	PTHR34575	PROTEIN PAM68, CHLOROPLASTIC	coord: 1..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..85
None	No IPR available	PANTHER	PTHR34575:SF6	EXPRESSED PROTEIN	coord: 1..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0018496.1	Tan0018496.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane