
Tan0018423 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTAGGTCACCGGCGGCGGCGGGCATGGGAAATCACGGTTCACGCCAAGATCAGTAACCTTTATATCAAGCTCAAGGCCACCGTGAAACTTCCGTTAGGAAAATTCCAACGCCTCCTTAAGGTGGACAAATTACTCATCGGACTGGATTCCAAATCTGAATCTCGGATCCTCGTTCAGCAACGGCGGACTTTAAAATCCCGAACAATCAGCTTCGTCAAGAAACATTTCTGGCGTCGCCGATCTAAAACCAGCGTCGGCTTCAAAATGCCAGATGCCTCGTGCTCATATCCATACCTAATTGCTGAAACTGAAAATCGATCTTGGCGTCTGGGCCGTGTGGTACGAAGTTTTGAACATAACGTGTTCGATGAATTGAATTAGAATGAGGAGTTTCAATTTACAGATTGTTGATTGATGTGCAGGAATTAAGTTGCGTGGCTGCTTTTGGTGTTGGACTGGGTTATCTATCTGCTTGCGGAATTTGGCGCCACATTGAAGACAAATGTTGGTATAGTTCCCAGCTTGAGTTCCTTTATATTGGTGTGCCTGATTTTATTTGTTTTATGGCTCCACAAATCCAAGTTCCTTTGGGCAATGCTTTGTGGTTTCTCTCTTACCGCTAGAAATTGATAGATGTCTAGAACTTTTAGAGCCGGTTTGGGCAATGCTTCGTGGACCTCTTTCTTTTCATTCTTATATCTTATAACCTCATTCTTTTCATTTTTCCTTACAAATGTTTGACATCTTCTGGTGTCCAAACTACTGGTCCAAAAAGAGTTTAATTCTACCTGGATCGGTATCATTTATACGTCGACATTCTTCCATAGATTTTGGATCAGAATCATTTCATTAATAATATCATGACCAAGATTGTGAGCAAAAATGTTGTCAACAAATCTTTCAGTTTCATCTTTTTTCTGATATAATATAGTTGTATCATAGATGGAAGTCGCAATAGCTTCTCTTGAATCATGTCAGGCTCACCCCTCATTGCTACTATTTCCTTATCGGTAACATTCAATCGTTCTTCCAGCCGTTGCGTCATCCTTCGATCCTTCGAGTCCTCCCCAAGTTGGTTGCTCTGCCAATATATTAGGATTTTCCCCTTTTATATTGATAAACAGAGAGGATCAAAAGAAAATACAAAACTTCCAGCGGATGCTAATTCCCATCTGCCATAGGACCCACAGCAACGCTCCCACTTGCCCCTCCCTGCTCCTCTAACGAACTTGACGCCCTTTTTCCCTTTTTACCCCTTCTAAAATAATGGGCCTTGATTGGGGCCTAACACATCCTTCCAAGAATAATGAGCACACAATCTAGTAACCACTTTAATCTTATCAAAATCAACATTCACAACTTCATTTTTTAACCCAAAAATGAGAAGGTACCGAGAAACTTAAGAAGACTTGGAAGAAGAACAGACCGGGGTGGAGGCTTTTCAGACTGCTCACAAGCGACCTTTGCTTCTAAATTGGAAGAGGAATGCTTTTCAGTCGAAGCTACATCAGACACTATAATGGACTTACTCGAACCATCTCCATTCAAGCTGACAAAACCCAAGTACGCAGATAAACCTAAGCAATTCTCTAGTTCCCTGAAGAGAAGCCAACGTTTTTTAAATTAACCTGGATCTCTAATGAACTTTCTTCCACTAATGCAATCCACCACTCTACCCTATTGAATCTGCCGCTTGGCCGGACCGATTGTTCTGGAATCACTTTTATGCTTCAACAGAAATGGCAAGTGAGTCGGATTATGCAAGAGCTTGACAAAGGCACTTTCGAACGAGACAAGATGCTGAGGCACGACCTTGAGAGCTAATTGGATGTTAGCATCCTCAACATATAACGAACATTCTAACCTCCATGATAAAGAAACAAAACCACCAGAGAATGACCGTGAGGACTGCTGAAAAACTGGCTAATGAAGTCTTAAAACGACGGCCGTAGGAGAAGAAACCAACGACTGAAGGCTCGGGGAAGGAGAGAAGAGAG ATGGCGTTAGGTCACCGGCGGCGGCGGGCATGGGAAATCACGGTTCACGCCAAGATCAGTAACCTTTATATCAAGCTCAAGGCCACCGTGAAACTTCCGTTAGGAAAATTCCAACGCCTCCTTAAGGTGGACAAATTACTCATCGGACTGGATTCCAAATCTGAATCTCGGATCCTCGTTCAGCAACGGCGGACTTTAAAATCCCGAACAATCAGCTTCGTCAAGAAACATTTCTGGCGTCGCCGATCTAAAACCAGCGTCGGCTTCAAAATGCCAGATGCCTCGTGCTCATATCCATACCTAATTGCTGAAACTGAAAATCGATCTTGGCGTCTGGGCCGTGTGGAATTAAGTTGCGTGGCTGCTTTTGGTGTTGGACTGGGTTATCTATCTGCTTTTCCCAGCTTGAGTTCCTTTATATTGGTGTGCCTGATTTTATTTGTTTTATGGCTCCACAAATCCAAGTTCCTTTGGGCAATGCTTTGTGGTTTCTCTCTTACCGCTAGAAATTGATAGATGTCTAGAACTTTTAGAGCCGGTTTGGGCAATGCTTCGTGGACCTCTTTCTTTTCATTCTTATATCTTATAACCTCATTCTTTTCATTTTTCCTTACAAATGTTTGACATCTTCTGGTGTCCAAACTACTGGTCCAAAAAGAGTTTAATTCTACCTGGATCGGTATCATTTATACGTCGACATTCTTCCATAGATTTTGGATCAGAATCATTTCATTAATAATATCATGACCAAGATTGTGAGCAAAAATGTTGTCAACAAATCTTTCAGTTTCATCTTTTTTCTGATATAATATAGTTGTATCATAGATGGAAGTCGCAATAGCTTCTCTTGAATCATGTCAGGCTCACCCCTCATTGCTACTATTTCCTTATCGGTAACATTCAATCGTTCTTCCAGCCGTTGCGTCATCCTTCGATCCTTCGAGTCCTCCCCAAGTTGGTTGCTCTGCCAATATATTAGGATTTTCCCCTTTTATATTGATAAACAGAGAGGATCAAAAGAAAATACAAAACTTCCAGCGGATGCTAATTCCCATCTGCCATAGGACCCACAGCAACGCTCCCACTTGCCCCTCCCTGCTCCTCTAACGAACTTGACGCCCTTTTTCCCTTTTTACCCCTTCTAAAATAATGGGCCTTGATTGGGGCCTAACACATCCTTCCAAGAATAATGAGCACACAATCTAGTAACCACTTTAATCTTATCAAAATCAACATTCACAACTTCATTTTTTAACCCAAAAATGAGAAGGTACCGAGAAACTTAAGAAGACTTGGAAGAAGAACAGACCGGGGTGGAGGCTTTTCAGACTGCTCACAAGCGACCTTTGCTTCTAAATTGGAAGAGGAATGCTTTTCAGTCGAAGCTACATCAGACACTATAATGGACTTACTCGAACCATCTCCATTCAAGCTGACAAAACCCAAGTACGCAGATAAACCTAAGCAATTCTCTAGTTCCCTGAAGAGAAGCCAACGTTTTTTAAATTAACCTGGATCTCTAATGAACTTTCTTCCACTAATGCAATCCACCACTCTACCCTATTGAATCTGCCGCTTGGCCGGACCGATTGTTCTGGAATCACTTTTATGCTTCAACAGAAATGGCAAGTGAGTCGGATTATGCAAGAGCTTGACAAAGGCACTTTCGAACGAGACAAGATGCTGAGGCACGACCTTGAGAGCTAATTGGATGTTAGCATCCTCAACATATAACGAACATTCTAACCTCCATGATAAAGAAACAAAACCACCAGAGAATGACCGTGAGGACTGCTGAAAAACTGGCTAATGAAGTCTTAAAACGACGGCCGTAGGAGAAGAAACCAACGACTGAAGGCTCGGGGAAGGAGAGAAGAGAG ATGGCGTTAGGTCACCGGCGGCGGCGGGCATGGGAAATCACGGTTCACGCCAAGATCAGTAACCTTTATATCAAGCTCAAGGCCACCGTGAAACTTCCGTTAGGAAAATTCCAACGCCTCCTTAAGGTGGACAAATTACTCATCGGACTGGATTCCAAATCTGAATCTCGGATCCTCGTTCAGCAACGGCGGACTTTAAAATCCCGAACAATCAGCTTCGTCAAGAAACATTTCTGGCGTCGCCGATCTAAAACCAGCGTCGGCTTCAAAATGCCAGATGCCTCGTGCTCATATCCATACCTAATTGCTGAAACTGAAAATCGATCTTGGCGTCTGGGCCGTGTGGAATTAAGTTGCGTGGCTGCTTTTGGTGTTGGACTGGGTTATCTATCTGCTTTTCCCAGCTTGAGTTCCTTTATATTGGTGTGCCTGATTTTATTTGTTTTATGGCTCCACAAATCCAAGTTCCTTTGGGCAATGCTTTGTGGTTTCTCTCTTACCGCTAGAAATTGA MALGHRRRRAWEITVHAKISNLYIKLKATVKLPLGKFQRLLKVDKLLIGLDSKSESRILVQQRRTLKSRTISFVKKHFWRRRSKTSVGFKMPDASCSYPYLIAETENRSWRLGRVELSCVAAFGVGLGYLSAFPSLSSFILVCLILFVLWLHKSKFLWAMLCGFSLTARN Homology
BLAST of Tan0018423 vs. NCBI nr
Match: XP_023540743.1 (uncharacterized protein LOC111801019 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 221.1 bits (562), Expect = 7.4e-54 Identity = 122/174 (70.11%), Postives = 135/174 (77.59%), Query Frame = 0
BLAST of Tan0018423 vs. NCBI nr
Match: KAG7027863.1 (hypothetical protein SDJN02_09040 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 220.3 bits (560), Expect = 1.3e-53 Identity = 123/174 (70.69%), Postives = 133/174 (76.44%), Query Frame = 0
BLAST of Tan0018423 vs. NCBI nr
Match: KAG6596309.1 (hypothetical protein SDJN03_09489, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 220.3 bits (560), Expect = 1.3e-53 Identity = 123/174 (70.69%), Postives = 133/174 (76.44%), Query Frame = 0
BLAST of Tan0018423 vs. NCBI nr
Match: XP_038906422.1 (uncharacterized protein LOC120092221 [Benincasa hispida]) HSP 1 Score: 165.6 bits (418), Expect = 3.7e-37 Identity = 106/176 (60.23%), Postives = 123/176 (69.89%), Query Frame = 0
BLAST of Tan0018423 vs. NCBI nr
Match: KAE8650972.1 (hypothetical protein Csa_002588 [Cucumis sativus]) HSP 1 Score: 163.3 bits (412), Expect = 1.8e-36 Identity = 100/173 (57.80%), Postives = 120/173 (69.36%), Query Frame = 0
BLAST of Tan0018423 vs. ExPASy TrEMBL
Match: A0A1S3B4Y8 (uncharacterized protein LOC103486229 OS=Cucumis melo OX=3656 GN=LOC103486229 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 9.5e-31 Identity = 92/172 (53.49%), Postives = 113/172 (65.70%), Query Frame = 0
BLAST of Tan0018423 vs. ExPASy TrEMBL
Match: A0A0A0LCL9 (50S ribosomal protein L35 OS=Cucumis sativus OX=3659 GN=Csa_3G728110 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.0e-29 Identity = 88/156 (56.41%), Postives = 106/156 (67.95%), Query Frame = 0
BLAST of Tan0018423 vs. ExPASy TrEMBL
Match: A0A5A7TM08 (RING-H2 finger protein ATL74-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005850 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25 Identity = 76/132 (57.58%), Postives = 90/132 (68.18%), Query Frame = 0
BLAST of Tan0018423 vs. ExPASy TrEMBL
Match: A0A5D3DNQ2 (50S ribosomal protein L35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00230 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.1e-23 Identity = 75/140 (53.57%), Postives = 92/140 (65.71%), Query Frame = 0
BLAST of Tan0018423 vs. ExPASy TrEMBL
Match: A0A6P6A826 (uncharacterized protein LOC111307197 isoform X2 OS=Durio zibethinus OX=66656 GN=LOC111307197 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 8.9e-05 Identity = 38/120 (31.67%), Postives = 68/120 (56.67%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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