Tan0018221 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCGCAAAAGCAAAAGGGAACAGCAGAGGCCTAAGATATCAAGACAGCAACTAAGTTTAATCTTCAAAAACCATGACCGCGACGGCGACGGCCGCCTCAGCGCCACCGACCTTACTGAAGCCTTCCACTATATCGGCGCCCTTCTGCCGTCTTACCGAGCTTGCCACGCTCTTCTTCACACCGATTCCGATCGAGATGGATTCATCTGCGAGAAGGATTTCGAATTGCTCGTCAATTATGCCGAGAAACGCAAATACACAGTCATTTGA ATGTCTCGCAAAAGCAAAAGGGAACAGCAGAGGCCTAAGATATCAAGACAGCAACTAAGTTTAATCTTCAAAAACCATGACCGCGACGGCGACGGCCGCCTCAGCGCCACCGACCTTACTGAAGCCTTCCACTATATCGGCGCCCTTCTGCCGTCTTACCGAGCTTGCCACGCTCTTCTTCACACCGATTCCGATCGAGATGGATTCATCTGCGAGAAGGATTTCGAATTGCTCGTCAATTATGCCGAGAAACGCAAATACACAGTCATTTGA ATGTCTCGCAAAAGCAAAAGGGAACAGCAGAGGCCTAAGATATCAAGACAGCAACTAAGTTTAATCTTCAAAAACCATGACCGCGACGGCGACGGCCGCCTCAGCGCCACCGACCTTACTGAAGCCTTCCACTATATCGGCGCCCTTCTGCCGTCTTACCGAGCTTGCCACGCTCTTCTTCACACCGATTCCGATCGAGATGGATTCATCTGCGAGAAGGATTTCGAATTGCTCGTCAATTATGCCGAGAAACGCAAATACACAGTCATTTGA MSRKSKREQQRPKISRQQLSLIFKNHDRDGDGRLSATDLTEAFHYIGALLPSYRACHALLHTDSDRDGFICEKDFELLVNYAEKRKYTVI Homology
BLAST of Tan0018221 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.0e-04 Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = 0
BLAST of Tan0018221 vs. ExPASy Swiss-Prot
Match: Q8L3R2 (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2) HSP 1 Score: 45.1 bits (105), Expect = 5.0e-04 Identity = 21/61 (34.43%), Postives = 35/61 (57.38%), Query Frame = 0
BLAST of Tan0018221 vs. ExPASy Swiss-Prot
Match: O81701 (Polcalcin Aln g 4 OS=Alnus glutinosa OX=3517 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.0e-04 Identity = 21/54 (38.89%), Postives = 34/54 (62.96%), Query Frame = 0
BLAST of Tan0018221 vs. ExPASy Swiss-Prot
Match: Q0DJV6 (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 6.6e-04 Identity = 20/58 (34.48%), Postives = 32/58 (55.17%), Query Frame = 0
BLAST of Tan0018221 vs. ExPASy Swiss-Prot
Match: Q8RYK0 (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 GN=CML31 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 6.6e-04 Identity = 24/65 (36.92%), Postives = 33/65 (50.77%), Query Frame = 0
BLAST of Tan0018221 vs. NCBI nr
Match: KAG6600743.1 (Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031384.1 Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 148.7 bits (374), Expect = 2.5e-32 Identity = 71/90 (78.89%), Postives = 82/90 (91.11%), Query Frame = 0
BLAST of Tan0018221 vs. NCBI nr
Match: KAG7024248.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.1 bits (370), Expect = 7.2e-32 Identity = 73/90 (81.11%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of Tan0018221 vs. NCBI nr
Match: KAG6591370.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.1 bits (362), Expect = 6.1e-31 Identity = 71/88 (80.68%), Postives = 77/88 (87.50%), Query Frame = 0
BLAST of Tan0018221 vs. NCBI nr
Match: KAG6608481.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037808.1 putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 141.0 bits (354), Expect = 5.1e-30 Identity = 68/90 (75.56%), Postives = 78/90 (86.67%), Query Frame = 0
BLAST of Tan0018221 vs. NCBI nr
Match: KAG6600744.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 141.0 bits (354), Expect = 5.1e-30 Identity = 67/90 (74.44%), Postives = 80/90 (88.89%), Query Frame = 0
BLAST of Tan0018221 vs. ExPASy TrEMBL
Match: A0A0A0KZR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.8e-28 Identity = 67/90 (74.44%), Postives = 75/90 (83.33%), Query Frame = 0
BLAST of Tan0018221 vs. ExPASy TrEMBL
Match: A0A5A7VDB9 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003480 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 4.0e-28 Identity = 66/90 (73.33%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of Tan0018221 vs. ExPASy TrEMBL
Match: A5AWP8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023174 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.8e-12 Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of Tan0018221 vs. ExPASy TrEMBL
Match: A0A5N6RQV2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018544 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 4.0e-12 Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 0
BLAST of Tan0018221 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.8e-12 Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 0
BLAST of Tan0018221 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 ) HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05 Identity = 21/61 (34.43%), Postives = 35/61 (57.38%), Query Frame = 0
BLAST of Tan0018221 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 ) HSP 1 Score: 41.6 bits (96), Expect = 3.9e-04 Identity = 20/62 (32.26%), Postives = 33/62 (53.23%), Query Frame = 0
BLAST of Tan0018221 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family ) HSP 1 Score: 41.6 bits (96), Expect = 3.9e-04 Identity = 16/58 (27.59%), Postives = 34/58 (58.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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