Tan0018044 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGTACCGATCAACCAGAAGAAAAGGTGGCTCCTCCATGGGGAGAGCTCACCGTGGCCGGTGATTTCGTCGACGGACTTTGAACAGGGAGAAAGTTGCTGAGTAACGGAACGTGAAGAGAAGAAGGAATAAGCTTGTCGGGATCGGAAATTGCACGCATCTTTTGGTTTTATCAATCGGCGGTCAAGTATGAGCTTCCTCTTTGGCAGCCGAAAAACTCCCGCAGGTTCTTAATGTTCTTACCTTCTCAAATTTTGGATATTCTGGAGCTTTGTTTTTTATGATAGCTTGATTTCTTGTGATGAATGTCTAACTCTGGAGTTTAGTTTCCTATAAATGTCAATTTGATGCGGATGAAGTTTTGCGTTCTTAACTTCTCAATTAATGTATACTCCGGAGCTTTGTTCTTGTGATAGCGTGATTTCTTGTGTTAGTTTATAAGTTTGGAGTTCATACCTGTAAACGTCAATTTGATGTGGATGAAATTCTTCGACAGTAATTTCAATACATGTAATTTTACTCGTGATGTCGAAGAATCAAAACATGCCTGTGCGTTATAATTTGTGTAAGTAAATTTGTGCGTTCTATCACAATAGACGGCTCGAGATTGTAATCTGTTTGGTTTTCTGCACAGAGATTCTGCGGGAGAACAAGAGGATGCTAGATAAGTCCATTAGAGAAATAGAACGGGAAAGACAAGGCTTACAGTCTCAGGAAAAGAAGTTGATTGTTGAGATAAAGAAAAATGCTAAACAAGGACAAATGGTGAGTTAAGCAATTTAGAACTTGTTCTTTGACATCGACACTTCAGTGTCTGCATTTCTTTTGTTTTACTGGTAGTAAGTGTGCTTCTAATTTTGAATCGAAATCTAGTCTTTCGTTCTTTTGTTTCTTTAGGAAGGGTGATCGATACTAGGCTGGAACCATCAACTGCGCACAATGTCCTTGATTCATTTTGTCTTTTTCAGGGAGCTGTTAAAATAATGGCCAAAGATCTTATCAGGACACGACATCAGATTGAAAAGTTTTATAAACTAAAATCACAGCTCCAGGGCGTGGCTTTGAGAATTCAGGTATCCTATATACACCGTTCTCCGAAGCTAATATTACCTCTCTTCTTTTATTTTTCATCAGAGCGACTATAGTACTGCTGAGAACTATTTGTACAAGTTTTGGATTATAATTATTGACTTGATGTGCTAGGACGCAGGTGATAGTTATTTCTGATAGATGAGCTCTAAAAATCTAAAATGAAAGTTTAAGGTTGTAACCATCTAGAGCTTGTAAAGCTTCATTGTAGATGCATTCTATTGGTTTAAATTTTAAATGAGGTGCGCTTATATACGTGCTAAGAAAAGAAGCATTTTACAAGCCATACTGTCCTCTTCCCATACAATGAAGAACAAAATAACAAAATGCTTTAGTATTGGTTTAATTTCGCTTGCATCCTCTAATTTTGTTGTGTTGTAAAAGGAAGATGTGAACAAAATTGGGATTTTGAGGGAACACTATTTTCTTGCTTCAAGTTGATGTGCAAATTGGAAATTGAAAAGTTTATTCAGTCACTTTTTTAAAAATGGATTTGATTCCATTAAATCTTATCTGCTTTTTTAGGGTGTGTTTCTAAATTGATTTTTAATAAAAAATTTGGAAAAACTATCTTTTTAGTTCTTTTTTTTATTTCAGAAACTTTACTGCGAAGGTTGTTTCTAGTATGTCTGCCTTCTGTTTACTTTTCGATTTTGTTTATCTAATATGTCGTATTCTGGATCACTGTCCATTGAAATACACCATGATTAATACAATTTTCCATTATTCAATATTTATGAAACAAGTGGCTATATTATTAGAAAAAGAGAAAATATTGTTTTCTATTCGAAGAAAACTGCTCATTACTGTAAGTGGAGGTTTCTTTATAAACTTCATCCTCAAATGAACTCTTGCTTTCTTTTTGAGACCATAAAGATATAAAGTTGTTTTTTAAATCAATTGACACATACAATTTCTGCAAATTTCTGCAATTGTGATTATTTAGAGGTTAAAAAATGCTTTTGGTCCCAGGACTTTCATAAAAGTAACAATTTAGTGTCTAACTTTATTTTGTAATAATTTAGACGCCGTACATTCAAATTTATAACAATTTAGTCCCTAAACTTTAGTATGTGACAATTTTGTATTTGTACTCTCAAATTTGTAACAATTTAATTCCTACCGTAGAAAATTCCATCAAAATTAAATGTCGGGTTTTATTATTTAAGATTCAATAATTTTCACCATAGTGACTAAATCATTATAAATTTTCATGTATAGGGACTAAATTGTTACATACTTATGTTCAAGCACTAAATTGTTACAAAATTGAGAGTACATGACTAAATTATTACAAACCAAAGTTCATGAATTAAGTGGTTACTTTCATGAAAGTTCAGGAGCCAAAAGTGATTTTTAACCTGATTTAAATTTTGCTCCAATTGTTTGCTTCCTGCAGACACTGAAATCAACTCAAGCTATGGGAGAAGCCATGAAAGGTGTTACTAAGGCAATGGGCCAGATGAATAGGCAGATGAACTTGCCGGCATTACAGAAGATAATGCAAGAGTTTGAGAGGCAGAATGAGAAGATGGAAATGACATCTGAAATAATGGCAGATGCTCTTGACGATGCTTTAGAAGGAGATGAAGAAGAGGAGGAGACAGATGAGCTTGTAAATCAGGTGCTTGATGAGATTGGAATTGATATCAACTCAGAGGTAAATGTGCTTGCATTTGCATGCATACATTTTTGTCATAATGGTCCATATATTATCGTGGGAAAAGGTAATTTAATCACTATGTTGATTGCTTTCTGCTATCTCTCACACGCAGCTTGTGAATGCACCCTCAGCTTCTGTGTCAGTGTCAACTGCGAATAATAGGGTTCCCCAAGCAGAAGCCGAAGATACTGGAATTGACAGTGATTTACAGGCTAGGCTGGATAACTTGAGAAAGATGTAGGTTTCCATTATGGGGAATTAATAACACTCCGATAATATACATAATAAATCATGTATTGTTTATATTTGCACTCTATTCAGCTAAGTTTGTATTTGAATAATATATTGACAAGTATGATCTCTTATTTGGAGAAATGTGACAATGTATTTAGCACTTGTGATA GCGTACCGATCAACCAGAAGAAAAGGTGGCTCCTCCATGGGGAGAGCTCACCGTGGCCGGTGATTTCGTCGACGGACTTTGAACAGGGAGAAAGTTGCTGAGTAACGGAACGTGAAGAGAAGAAGGAATAAGCTTGTCGGGATCGGAAATTGCACGCATCTTTTGGTTTTATCAATCGGCGGTCAAGTATGAGCTTCCTCTTTGGCAGCCGAAAAACTCCCGCAGAGATTCTGCGGGAGAACAAGAGGATGCTAGATAAGTCCATTAGAGAAATAGAACGGGAAAGACAAGGCTTACAGTCTCAGGAAAAGAAGTTGATTGTTGAGATAAAGAAAAATGCTAAACAAGGACAAATGGGAGCTGTTAAAATAATGGCCAAAGATCTTATCAGGACACGACATCAGATTGAAAAGTTTTATAAACTAAAATCACAGCTCCAGGGCGTGGCTTTGAGAATTCAGACACTGAAATCAACTCAAGCTATGGGAGAAGCCATGAAAGGTGTTACTAAGGCAATGGGCCAGATGAATAGGCAGATGAACTTGCCGGCATTACAGAAGATAATGCAAGAGTTTGAGAGGCAGAATGAGAAGATGGAAATGACATCTGAAATAATGGCAGATGCTCTTGACGATGCTTTAGAAGGAGATGAAGAAGAGGAGGAGACAGATGAGCTTGTAAATCAGGTGCTTGATGAGATTGGAATTGATATCAACTCAGAGCTTGTGAATGCACCCTCAGCTTCTGTGTCAGTGTCAACTGCGAATAATAGGGTTCCCCAAGCAGAAGCCGAAGATACTGGAATTGACAGTGATTTACAGGCTAGGCTGGATAACTTGAGAAAGATGTAGGTTTCCATTATGGGGAATTAATAACACTCCGATAATATACATAATAAATCATGTATTGTTTATATTTGCACTCTATTCAGCTAAGTTTGTATTTGAATAATATATTGACAAGTATGATCTCTTATTTGGAGAAATGTGACAATGTATTTAGCACTTGTGATA ATGAGCTTCCTCTTTGGCAGCCGAAAAACTCCCGCAGAGATTCTGCGGGAGAACAAGAGGATGCTAGATAAGTCCATTAGAGAAATAGAACGGGAAAGACAAGGCTTACAGTCTCAGGAAAAGAAGTTGATTGTTGAGATAAAGAAAAATGCTAAACAAGGACAAATGGGAGCTGTTAAAATAATGGCCAAAGATCTTATCAGGACACGACATCAGATTGAAAAGTTTTATAAACTAAAATCACAGCTCCAGGGCGTGGCTTTGAGAATTCAGACACTGAAATCAACTCAAGCTATGGGAGAAGCCATGAAAGGTGTTACTAAGGCAATGGGCCAGATGAATAGGCAGATGAACTTGCCGGCATTACAGAAGATAATGCAAGAGTTTGAGAGGCAGAATGAGAAGATGGAAATGACATCTGAAATAATGGCAGATGCTCTTGACGATGCTTTAGAAGGAGATGAAGAAGAGGAGGAGACAGATGAGCTTGTAAATCAGGTGCTTGATGAGATTGGAATTGATATCAACTCAGAGCTTGTGAATGCACCCTCAGCTTCTGTGTCAGTGTCAACTGCGAATAATAGGGTTCCCCAAGCAGAAGCCGAAGATACTGGAATTGACAGTGATTTACAGGCTAGGCTGGATAACTTGAGAAAGATGTAG MSFLFGSRKTPAEILRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVKIMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPALQKIMQEFERQNEKMEMTSEIMADALDDALEGDEEEEETDELVNQVLDEIGIDINSELVNAPSASVSVSTANNRVPQAEAEDTGIDSDLQARLDNLRKM Homology
BLAST of Tan0018044 vs. ExPASy Swiss-Prot
Match: Q9SKI2 (Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS2.1 PE=1 SV=2) HSP 1 Score: 344.0 bits (881), Expect = 1.3e-93 Identity = 192/224 (85.71%), Postives = 208/224 (92.86%), Query Frame = 0
BLAST of Tan0018044 vs. ExPASy Swiss-Prot
Match: Q6IP52 (Charged multivesicular body protein 2a OS=Xenopus laevis OX=8355 GN=chmp2a PE=2 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 2.3e-58 Identity = 122/219 (55.71%), Postives = 169/219 (77.17%), Query Frame = 0
BLAST of Tan0018044 vs. ExPASy Swiss-Prot
Match: Q54DB1 (Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum OX=44689 GN=chmp2a2 PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 3.9e-58 Identity = 124/191 (64.92%), Postives = 160/191 (83.77%), Query Frame = 0
BLAST of Tan0018044 vs. ExPASy Swiss-Prot
Match: Q6DFS6 (Charged multivesicular body protein 2a OS=Xenopus tropicalis OX=8364 GN=chmp2a PE=2 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 5.1e-58 Identity = 122/219 (55.71%), Postives = 168/219 (76.71%), Query Frame = 0
BLAST of Tan0018044 vs. ExPASy Swiss-Prot
Match: O43633 (Charged multivesicular body protein 2a OS=Homo sapiens OX=9606 GN=CHMP2A PE=1 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 5.6e-57 Identity = 122/221 (55.20%), Postives = 167/221 (75.57%), Query Frame = 0
BLAST of Tan0018044 vs. NCBI nr
Match: XP_008462317.1 (PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1-like [Cucumis melo] >XP_038897571.1 vacuolar protein sorting-associated protein 2 homolog 1-like [Benincasa hispida]) HSP 1 Score: 391.7 bits (1005), Expect = 4.1e-105 Identity = 216/220 (98.18%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Tan0018044 vs. NCBI nr
Match: XP_022954248.1 (vacuolar protein sorting-associated protein 2 homolog 1-like [Cucurbita moschata] >XP_022992389.1 vacuolar protein sorting-associated protein 2 homolog 1-like [Cucurbita maxima] >KAG7013995.1 Vacuolar protein sorting-associated protein 2-like 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104 Identity = 215/220 (97.73%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Tan0018044 vs. NCBI nr
Match: XP_004141696.1 (vacuolar protein sorting-associated protein 2 homolog 1 [Cucumis sativus] >KGN45498.1 hypothetical protein Csa_016370 [Cucumis sativus]) HSP 1 Score: 388.7 bits (997), Expect = 3.5e-104 Identity = 214/220 (97.27%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Tan0018044 vs. NCBI nr
Match: KAG6575451.1 (Vacuolar protein sorting-associated protein 2-like 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 388.7 bits (997), Expect = 3.5e-104 Identity = 214/220 (97.27%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Tan0018044 vs. NCBI nr
Match: XP_022964195.1 (vacuolar protein sorting-associated protein 2 homolog 1-like [Cucurbita moschata] >XP_022999987.1 vacuolar protein sorting-associated protein 2 homolog 1-like [Cucurbita maxima] >XP_023514166.1 vacuolar protein sorting-associated protein 2 homolog 1-like [Cucurbita pepo subsp. pepo] >KAG6593543.1 Vacuolar protein sorting-associated protein 2-like 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 387.9 bits (995), Expect = 5.9e-104 Identity = 215/220 (97.73%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Tan0018044 vs. ExPASy TrEMBL
Match: A0A1S3CGM4 (vacuolar protein sorting-associated protein 2 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103500700 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 2.0e-105 Identity = 216/220 (98.18%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Tan0018044 vs. ExPASy TrEMBL
Match: A0A6J1JXE8 (vacuolar protein sorting-associated protein 2 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488711 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 5.7e-105 Identity = 215/220 (97.73%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Tan0018044 vs. ExPASy TrEMBL
Match: A0A6J1GQK3 (vacuolar protein sorting-associated protein 2 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456560 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 5.7e-105 Identity = 215/220 (97.73%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Tan0018044 vs. ExPASy TrEMBL
Match: A0A0A0K7U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450570 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 1.7e-104 Identity = 214/220 (97.27%), Postives = 219/220 (99.55%), Query Frame = 0
BLAST of Tan0018044 vs. ExPASy TrEMBL
Match: A0A6J1KC98 (vacuolar protein sorting-associated protein 2 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111494308 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 2.9e-104 Identity = 215/220 (97.73%), Postives = 218/220 (99.09%), Query Frame = 0
BLAST of Tan0018044 vs. TAIR 10
Match: AT2G06530.1 (SNF7 family protein ) HSP 1 Score: 344.0 bits (881), Expect = 9.1e-95 Identity = 192/224 (85.71%), Postives = 208/224 (92.86%), Query Frame = 0
BLAST of Tan0018044 vs. TAIR 10
Match: AT1G03950.1 (vacuolar protein sorting-associated protein 2.3 ) HSP 1 Score: 156.8 bits (395), Expect = 2.1e-38 Identity = 93/215 (43.26%), Postives = 143/215 (66.51%), Query Frame = 0
BLAST of Tan0018044 vs. TAIR 10
Match: AT5G44560.1 (SNF7 family protein ) HSP 1 Score: 144.8 bits (364), Expect = 8.1e-35 Identity = 87/221 (39.37%), Postives = 141/221 (63.80%), Query Frame = 0
BLAST of Tan0018044 vs. TAIR 10
Match: AT5G44560.2 (SNF7 family protein ) HSP 1 Score: 132.5 bits (332), Expect = 4.2e-31 Identity = 80/198 (40.40%), Postives = 128/198 (64.65%), Query Frame = 0
BLAST of Tan0018044 vs. TAIR 10
Match: AT5G22950.1 (SNF7 family protein ) HSP 1 Score: 78.6 bits (192), Expect = 7.1e-15 Identity = 57/217 (26.27%), Postives = 119/217 (54.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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