Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCTCTTCTTATAAATAACCCTAAAACACTCACATCACATTCATCATCTGAGTTTTTAAATTAAATTTTTCCATATATCATTTTCTATTTTATTTCCGACCAAACAAACCTTTTTTTTCTTGTTTCATTATGGCCGGTCGTTTTGGTCGTTCGTTATACCGTTTTTCTTCCGTTAACCGACCCGCTGCCCCCGGCGGCAATACTTCAAGTCAAGATTTGAATCAGTATGATGGTCGGCGGTATCCTTCAGCCACCAAAGACACGTCGGATGAACTCCGACCGACTCGCTCACCGCTGCTTTCGCCTACGTTCTCTGTCAAGAAGGCTGCTTCGCCGCCATCTTCTCCTCCGTCTTACAGAGCTTCGACTGTACGAATGATTCGCTCGCCATCGAAGCCTATAGACGAATACCCTAATTACAAACCTACTACTCGATCTAGGTTCGTTAAACTATCCCTAAATTCAAAAGCTTAAAACTCTTATTCTTCAACTGTGTCTTTTAAGTTTTTGTTTTTTAAAAAAAATAGACTTATTTTCTTATTATTTTTTTGGTATATGCTTTTTATCTTTATTGAAAACACATTTAAATTCTTAGCTAAATTTTGAAAATGCATTTAGAAAGTTAGATAACAAAACAAAAAAATATGAACACATAGAAAAGGAGTTTGAATGCTTAATTTTAAAACATAATAGTTATCAAATAGTACATGCTACCATGGTATTAAATTTTTATCGATATGTCGATATTTTTACATGTCTATGGGTTTGACATTGACACCAGAGTTAATCAACATTTCCATTATATCGTACAAAATTGATGAAATATTGAAGAAAACAGCAACAAAATATAATATAATGTGAATATAATATCATAACAAGTATTTTAACTTATTTAAAAAGTGTAAAAGGCTTACTCTCTAATTTAATACATTTTTTAACTTTTTTATTTTTAATTTTTTCCCAGAAATATCCATCGACATCGACATTTTATCGATATTTTCATCAACATTTCCATGAAATTGAGACTTCAATATTTCCATCGACATCGACATTTTAAATCTTGCATGCTACTACAAATTTTAAATATGCACCACATTTGATCTCTTACACATTAACCATGGTTTCTCAAGTTAGTCGTAGTCTATCCTCAATCGTGATTGATATTAGAAACAATTCACATAAGCCATCTGATCGTATGGTATAATAGACCATAGTCATGATTATGTAGTCTAAATTAAATTTTGTAGGTCTTATCTAATAACCATTTAGTTTTTTGTTTTTTATTTTTGAAAATTAAACTTAAAAATACTACTTCTCTCCATAGATTTCTATGTTTTTTTTATTTACTTTAAAACTCTATTTTTAAAAAACAATCTAAGTTTTGAAAACTAAAAAAAAAAAAGTTAAAAAAAAATAATATTAATATATATATATATATATTTAAAATTTTAGCTAGAAATTCAAGTAATGTCTTAAGAAATATGGAAATCATTACGAGAGAAGATAATGAAAAATTGAAAAAAAAATATATAATTTAAAAAAAAATAAATGGTTATTAAATCGGGTTGTAGTAGTGTGAGGCTTCAAAAGTCTCTTTCCTTACAACTGTCACCTTTTCAATTGTTTGATGTATGGTTAAATAAAAAAATTTATTTCTCCTTCATATATCTAACTTTATCATGAACTAGTTTAATTGTGTAGATATAGACTACAATATGTTTAAGTCATTTATTCATATTCTTAACACAGGTCACCTGAAGTCGAGCCTAAATCGATGGTCTACAAAGCCATCGAGAAGGTGACGAAGTCGGACCATCACGTCGGGTCGGGGAAGACGACGACCTCGTCCCACAAGCAGCAGCCAAATGCAATAAACATATCAGGAGAAAATCTTGGGGCAGTAATGGAAATTGTTGAGTCAAAACGGGAAGGGGGGCATGTCATAAAGAAGAAAGAGACAGTTAGAGGAATATTAAACAGCATTACCAATGACCAAAACAACGAAGATTCTAAGGACCACAAGGCCGAAGGCCAAAAAGCACTTAATTCTATGCCAGCAAGCACTTTTTTGAACAGCAATTTTCAGAGCGTAAATAATTCTCTTCTTTACGGTGCTTCTTTGGCTCACCGTGACCCCGGTTTGCACCTCTCTTTCTCCCGGAACCCGACCGGCGACCGGTTCACTCATGATGACAAGAAGCAACAGCACAAGAAGTACTAGAGATAAAGAAGCAAGAGAGAATTTAATGATGGATAATTAATAAAACAATAAGATTTATATATTATTATTATTATTATCTTATGAGAATAAAATGAGATGATTTATGTAACAGAAAAATGTCAGTATTATTTAAGTTTTATATGTGGTTTCATTGGTCATTAATTTATGTATGTTGAATATATAATATAAAGTTTGGATTTTCTTTTGGTTTTTGTGGCCAAAATTAATTTTAATCAAGT
mRNA sequence
GGCTCTTCTTATAAATAACCCTAAAACACTCACATCACATTCATCATCTGAGTTTTTAAATTAAATTTTTCCATATATCATTTTCTATTTTATTTCCGACCAAACAAACCTTTTTTTTCTTGTTTCATTATGGCCGGTCGTTTTGGTCGTTCGTTATACCGTTTTTCTTCCGTTAACCGACCCGCTGCCCCCGGCGGCAATACTTCAAGTCAAGATTTGAATCAGTATGATGGTCGGCGGTATCCTTCAGCCACCAAAGACACGTCGGATGAACTCCGACCGACTCGCTCACCGCTGCTTTCGCCTACGTTCTCTGTCAAGAAGGCTGCTTCGCCGCCATCTTCTCCTCCGTCTTACAGAGCTTCGACTGTACGAATGATTCGCTCGCCATCGAAGCCTATAGACGAATACCCTAATTACAAACCTACTACTCGATCTAGGTCACCTGAAGTCGAGCCTAAATCGATGGTCTACAAAGCCATCGAGAAGGTGACGAAGTCGGACCATCACGTCGGGTCGGGGAAGACGACGACCTCGTCCCACAAGCAGCAGCCAAATGCAATAAACATATCAGGAGAAAATCTTGGGGCAGTAATGGAAATTGTTGAGTCAAAACGGGAAGGGGGGCATGTCATAAAGAAGAAAGAGACAGTTAGAGGAATATTAAACAGCATTACCAATGACCAAAACAACGAAGATTCTAAGGACCACAAGGCCGAAGGCCAAAAAGCACTTAATTCTATGCCAGCAAGCACTTTTTTGAACAGCAATTTTCAGAGCGTAAATAATTCTCTTCTTTACGGTGCTTCTTTGGCTCACCGTGACCCCGGTTTGCACCTCTCTTTCTCCCGGAACCCGACCGGCGACCGGTTCACTCATGATGACAAGAAGCAACAGCACAAGAAGTACTAGAGATAAAGAAGCAAGAGAGAATTTAATGATGGATAATTAATAAAACAATAAGATTTATATATTATTATTATTATTATCTTATGAGAATAAAATGAGATGATTTATGTAACAGAAAAATGTCAGTATTATTTAAGTTTTATATGTGGTTTCATTGGTCATTAATTTATGTATGTTGAATATATAATATAAAGTTTGGATTTTCTTTTGGTTTTTGTGGCCAAAATTAATTTTAATCAAGT
Coding sequence (CDS)
ATGGCCGGTCGTTTTGGTCGTTCGTTATACCGTTTTTCTTCCGTTAACCGACCCGCTGCCCCCGGCGGCAATACTTCAAGTCAAGATTTGAATCAGTATGATGGTCGGCGGTATCCTTCAGCCACCAAAGACACGTCGGATGAACTCCGACCGACTCGCTCACCGCTGCTTTCGCCTACGTTCTCTGTCAAGAAGGCTGCTTCGCCGCCATCTTCTCCTCCGTCTTACAGAGCTTCGACTGTACGAATGATTCGCTCGCCATCGAAGCCTATAGACGAATACCCTAATTACAAACCTACTACTCGATCTAGGTCACCTGAAGTCGAGCCTAAATCGATGGTCTACAAAGCCATCGAGAAGGTGACGAAGTCGGACCATCACGTCGGGTCGGGGAAGACGACGACCTCGTCCCACAAGCAGCAGCCAAATGCAATAAACATATCAGGAGAAAATCTTGGGGCAGTAATGGAAATTGTTGAGTCAAAACGGGAAGGGGGGCATGTCATAAAGAAGAAAGAGACAGTTAGAGGAATATTAAACAGCATTACCAATGACCAAAACAACGAAGATTCTAAGGACCACAAGGCCGAAGGCCAAAAAGCACTTAATTCTATGCCAGCAAGCACTTTTTTGAACAGCAATTTTCAGAGCGTAAATAATTCTCTTCTTTACGGTGCTTCTTTGGCTCACCGTGACCCCGGTTTGCACCTCTCTTTCTCCCGGAACCCGACCGGCGACCGGTTCACTCATGATGACAAGAAGCAACAGCACAAGAAGTACTAG
Protein sequence
MAGRFGRSLYRFSSVNRPAAPGGNTSSQDLNQYDGRRYPSATKDTSDELRPTRSPLLSPTFSVKKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEVEPKSMVYKAIEKVTKSDHHVGSGKTTTSSHKQQPNAINISGENLGAVMEIVESKREGGHVIKKKETVRGILNSITNDQNNEDSKDHKAEGQKALNSMPASTFLNSNFQSVNNSLLYGASLAHRDPGLHLSFSRNPTGDRFTHDDKKQQHKKY
Homology
BLAST of Tan0017872 vs. NCBI nr
Match:
XP_022147459.1 (serine/arginine repetitive matrix protein 1-like [Momordica charantia])
HSP 1 Score: 311.6 bits (797), Expect = 6.3e-81
Identity = 181/275 (65.82%), Postives = 209/275 (76.00%), Query Frame = 0
Query: 1 MAGRFGRSLYRFSSVNRPAAPGGNTSSQDLNQYDGRRYPSATKDTSDELRPTRSPL---- 60
MAGR+GRS YRFSSVNRP APGGNTS+QD QYDGR+YPSAT+D+S E R P
Sbjct: 1 MAGRYGRSFYRFSSVNRPLAPGGNTSAQDSAQYDGRQYPSATRDSSVEPRARSPPFSPRR 60
Query: 61 ----LSPTFSVKKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEVEPKS 120
SPT+SVKKAASPPSSPP YRA R + SP + +DEYP YKPTT+ RSPE + K
Sbjct: 61 ESYPASPTYSVKKAASPPSSPP-YRAPAARTVSSPPRLVDEYPKYKPTTQPRSPEADQKP 120
Query: 121 MVYKAIEK-VTKSDHHVGSGKTTTSSHKQQ--PNAINISGENLGAVMEIVES-KREGGHV 180
++YKAIEK TKSD + +GKTT+S +QQ PNAINISGENLGAVMEIV+S KREGGH+
Sbjct: 121 VIYKAIEKATTKSDRYPETGKTTSSQKQQQQKPNAINISGENLGAVMEIVQSPKREGGHI 180
Query: 181 IKKKETVRGILNSITNDQNNEDSKDHK---AEGQKALNSMPASTFLNSNFQSVNNSLLYG 240
I+KKE+ L+S NDQNNE SKD K A + +S+PA+TFLNSNFQSVNNSLLY
Sbjct: 181 IRKKESRGSTLHS--NDQNNEHSKDQKGKEATSSSSSSSLPANTFLNSNFQSVNNSLLYN 240
Query: 241 ASLAHRDPGLHLSFSRNPTGDRFTHDDKKQQHKKY 261
ASLAHRDPGLHL+F+RNP GDRF DDKK H KY
Sbjct: 241 ASLAHRDPGLHLAFARNPAGDRFAADDKK-HHPKY 271
BLAST of Tan0017872 vs. NCBI nr
Match:
XP_008437848.1 (PREDICTED: uncharacterized protein LOC103483156 [Cucumis melo] >KAA0048861.1 zyxin-like [Cucumis melo var. makuwa] >TYK20813.1 zyxin-like [Cucumis melo var. makuwa])
HSP 1 Score: 281.6 bits (719), Expect = 7.0e-72
Identity = 175/277 (63.18%), Postives = 196/277 (70.76%), Query Frame = 0
Query: 1 MAGR-FGRSLYRFSSVNRPAAPGGNTSSQDLNQYDGRRYPSATKDTSDE---------LR 60
MAGR FGR +YRFSS NRP AP NTS QD QYD R+YPSAT+DTS E LR
Sbjct: 1 MAGRNFGR-MYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLR 60
Query: 61 PTRSPL-LSPTFSVKKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEVE 120
PL SPT+S+KKA SPPSSPP YR R I SP K +DEYP YKP T+ RSPE +
Sbjct: 61 KDDPPLPASPTYSIKKATSPPSSPP-YRGMAAREISSPPKMVDEYPKYKPITQPRSPEAK 120
Query: 121 PKSMVYK--AIEKVTKSDHHVGSGKTTTSSHKQQPNAINISGENLGAVMEIVE-SKREGG 180
K ++K +EKVTKSD + K +S QQPNAINI GEN+GAVMEIVE SKREGG
Sbjct: 121 QKPGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQQPNAINIKGENVGAVMEIVESSKREGG 180
Query: 181 HVIKK-KETVRGILNS--ITNDQNNEDSKDHKAEGQKALNSMPASTFLNSNFQSVNNSLL 240
H+IKK KET RGILN+ + NDQNNE SK +SMP +TFLNSNFQSVNNSLL
Sbjct: 181 HMIKKIKETARGILNNNDMANDQNNEASKTTN-------SSMPTNTFLNSNFQSVNNSLL 240
Query: 241 YGASLAHRDPGLHLSFSRNPTGDRFTHDDKKQQHKKY 261
Y A+L +RDPGLHLSFSRNPTGDRF DDKKQ H KY
Sbjct: 241 YNANLTYRDPGLHLSFSRNPTGDRFPVDDKKQHHTKY 268
BLAST of Tan0017872 vs. NCBI nr
Match:
XP_038879892.1 (uncharacterized protein At1g10890-like isoform X1 [Benincasa hispida])
HSP 1 Score: 281.2 bits (718), Expect = 9.2e-72
Identity = 174/276 (63.04%), Postives = 194/276 (70.29%), Query Frame = 0
Query: 1 MAGR-FGRSLYRFSSVNRPAAP-GGNTSSQDLNQYDGRRYPSATKDTSDELRPTRSPLL- 60
MAGR FGR LYRFSS NRP AP NTS QD QYDGR+Y SAT+DTS E R P L
Sbjct: 1 MAGRNFGR-LYRFSSANRPLAPSAANTSGQDSAQYDGRQYRSATRDTSLEPRARSPPPLS 60
Query: 61 ---------SPTFSVKKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEV 120
SPT+S+KKA SPP SPP YRA R+I SP K +DEY YKPTT+ RSPE
Sbjct: 61 PRRDQPLPASPTYSIKKATSPPPSPP-YRAPAARVISSPPKTVDEYSKYKPTTQPRSPEA 120
Query: 121 EPKSMVYKAIEKVTKSDHHVGSGKTTTSSHKQQPNAINISGENLGAVMEIVE-SKREG-G 180
+ K + K ++KVTKSD H S KT +S QQPNAINI G+N+GAVMEIVE SKREG G
Sbjct: 121 KQKPAIQKTVDKVTKSDRHHESSKTVSSHKVQQPNAINIKGDNVGAVMEIVESSKREGAG 180
Query: 181 HVIKKKETVRGILN--SITNDQNNEDSKDHKAEGQKALNSMPASTFLNSNFQSVNNSLLY 240
HVIKKKET R +LN + NDQ NE SK +SMP STFLNSNFQSVNNSLL+
Sbjct: 181 HVIKKKETARELLNKDNFANDQYNEASKTPN-------SSMPKSTFLNSNFQSVNNSLLF 240
Query: 241 GASLAHRDPGLHLSFSRNPTGDRFTHDDKKQQHKKY 261
A+LAHRDPGLHL+FS NPTGDR T DDKKQ H KY
Sbjct: 241 NATLAHRDPGLHLAFSLNPTGDRLTVDDKKQHHTKY 267
BLAST of Tan0017872 vs. NCBI nr
Match:
XP_004133795.1 (DNA-directed RNA polymerase II subunit RPB1 [Cucumis sativus] >KGN56393.1 hypothetical protein Csa_011382 [Cucumis sativus])
HSP 1 Score: 271.9 bits (694), Expect = 5.6e-69
Identity = 177/280 (63.21%), Postives = 199/280 (71.07%), Query Frame = 0
Query: 1 MAGR-FGRSLYRFSSVNRPAAPGGNTSSQDLNQYDGRRYPSATKDTSDE---------LR 60
MAGR FGR LYRFSS NRP AP NTS QD QYDGRRYPS+ +DTS E LR
Sbjct: 1 MAGRNFGR-LYRFSSANRPLAPVTNTSGQDSAQYDGRRYPSSARDTSLEPRSSPPRVALR 60
Query: 61 PTRSPL-LSPTFSVKKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEVE 120
PL SPT+S+KKA SPPSS PSYRA R I SP+K +DEYP YKP T+ RSPE +
Sbjct: 61 RDDQPLPASPTYSIKKATSPPSS-PSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAK 120
Query: 121 PKSMVY--KAIEKVTKSDHHVGSGKTTTSSHK--QQPNAINISGENLGAVMEIVE-SKRE 180
K ++ +EKVTKSD + S K T SSHK QPNAINI GEN+GAVMEIVE SKRE
Sbjct: 121 QKPGIFHKSTVEKVTKSDRYHESSK-TLSSHKGQLQPNAINIKGENVGAVMEIVESSKRE 180
Query: 181 GGHVIKK-KETVRGILNS--ITNDQNNEDSKDHKAEGQKALNSMPASTFLNSNFQSVNNS 240
GGH+IKK KET RGILN+ + NDQNNE SK +SMP +TFLNSNFQSVNNS
Sbjct: 181 GGHMIKKIKETARGILNNNDMANDQNNEASKAPN-------SSMPTNTFLNSNFQSVNNS 240
Query: 241 LLYGASLAHRDPGLHLSFSRNPTGDRFTHDD-KKQQHKKY 261
LLY A+L HRDPGLHL+FSRNPTG+R DD KKQ H +Y
Sbjct: 241 LLYNANLTHRDPGLHLAFSRNPTGERSGVDDHKKQHHTRY 270
BLAST of Tan0017872 vs. NCBI nr
Match:
XP_038879901.1 (uncharacterized protein LOC120071611 isoform X2 [Benincasa hispida])
HSP 1 Score: 264.6 bits (675), Expect = 8.9e-67
Identity = 169/276 (61.23%), Postives = 189/276 (68.48%), Query Frame = 0
Query: 1 MAGR-FGRSLYRFSSVNRPAAP-GGNTSSQDLNQYDGRRYPSATKDTSDELRPTRSPLL- 60
MAGR FGR LYRFSS NRP AP NTS QD QYDGR+Y SAT+DTS E R P L
Sbjct: 1 MAGRNFGR-LYRFSSANRPLAPSAANTSGQDSAQYDGRQYRSATRDTSLEPRARSPPPLS 60
Query: 61 ---------SPTFSVKKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEV 120
SPT+S+KKA SPP SPP YRA R+I SP K +DEY S+SPE
Sbjct: 61 PRRDQPLPASPTYSIKKATSPPPSPP-YRAPAARVISSPPKTVDEY--------SKSPEA 120
Query: 121 EPKSMVYKAIEKVTKSDHHVGSGKTTTSSHKQQPNAINISGENLGAVMEIVE-SKREG-G 180
+ K + K ++KVTKSD H S KT +S QQPNAINI G+N+GAVMEIVE SKREG G
Sbjct: 121 KQKPAIQKTVDKVTKSDRHHESSKTVSSHKVQQPNAINIKGDNVGAVMEIVESSKREGAG 180
Query: 181 HVIKKKETVRGILN--SITNDQNNEDSKDHKAEGQKALNSMPASTFLNSNFQSVNNSLLY 240
HVIKKKET R +LN + NDQ NE SK +SMP STFLNSNFQSVNNSLL+
Sbjct: 181 HVIKKKETARELLNKDNFANDQYNEASKTPN-------SSMPKSTFLNSNFQSVNNSLLF 240
Query: 241 GASLAHRDPGLHLSFSRNPTGDRFTHDDKKQQHKKY 261
A+LAHRDPGLHL+FS NPTGDR T DDKKQ H KY
Sbjct: 241 NATLAHRDPGLHLAFSLNPTGDRLTVDDKKQHHTKY 259
BLAST of Tan0017872 vs. ExPASy TrEMBL
Match:
A0A6J1D126 (serine/arginine repetitive matrix protein 1-like OS=Momordica charantia OX=3673 GN=LOC111016379 PE=4 SV=1)
HSP 1 Score: 311.6 bits (797), Expect = 3.1e-81
Identity = 181/275 (65.82%), Postives = 209/275 (76.00%), Query Frame = 0
Query: 1 MAGRFGRSLYRFSSVNRPAAPGGNTSSQDLNQYDGRRYPSATKDTSDELRPTRSPL---- 60
MAGR+GRS YRFSSVNRP APGGNTS+QD QYDGR+YPSAT+D+S E R P
Sbjct: 1 MAGRYGRSFYRFSSVNRPLAPGGNTSAQDSAQYDGRQYPSATRDSSVEPRARSPPFSPRR 60
Query: 61 ----LSPTFSVKKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEVEPKS 120
SPT+SVKKAASPPSSPP YRA R + SP + +DEYP YKPTT+ RSPE + K
Sbjct: 61 ESYPASPTYSVKKAASPPSSPP-YRAPAARTVSSPPRLVDEYPKYKPTTQPRSPEADQKP 120
Query: 121 MVYKAIEK-VTKSDHHVGSGKTTTSSHKQQ--PNAINISGENLGAVMEIVES-KREGGHV 180
++YKAIEK TKSD + +GKTT+S +QQ PNAINISGENLGAVMEIV+S KREGGH+
Sbjct: 121 VIYKAIEKATTKSDRYPETGKTTSSQKQQQQKPNAINISGENLGAVMEIVQSPKREGGHI 180
Query: 181 IKKKETVRGILNSITNDQNNEDSKDHK---AEGQKALNSMPASTFLNSNFQSVNNSLLYG 240
I+KKE+ L+S NDQNNE SKD K A + +S+PA+TFLNSNFQSVNNSLLY
Sbjct: 181 IRKKESRGSTLHS--NDQNNEHSKDQKGKEATSSSSSSSLPANTFLNSNFQSVNNSLLYN 240
Query: 241 ASLAHRDPGLHLSFSRNPTGDRFTHDDKKQQHKKY 261
ASLAHRDPGLHL+F+RNP GDRF DDKK H KY
Sbjct: 241 ASLAHRDPGLHLAFARNPAGDRFAADDKK-HHPKY 271
BLAST of Tan0017872 vs. ExPASy TrEMBL
Match:
A0A5A7U5I8 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00740 PE=4 SV=1)
HSP 1 Score: 281.6 bits (719), Expect = 3.4e-72
Identity = 175/277 (63.18%), Postives = 196/277 (70.76%), Query Frame = 0
Query: 1 MAGR-FGRSLYRFSSVNRPAAPGGNTSSQDLNQYDGRRYPSATKDTSDE---------LR 60
MAGR FGR +YRFSS NRP AP NTS QD QYD R+YPSAT+DTS E LR
Sbjct: 1 MAGRNFGR-MYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLR 60
Query: 61 PTRSPL-LSPTFSVKKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEVE 120
PL SPT+S+KKA SPPSSPP YR R I SP K +DEYP YKP T+ RSPE +
Sbjct: 61 KDDPPLPASPTYSIKKATSPPSSPP-YRGMAAREISSPPKMVDEYPKYKPITQPRSPEAK 120
Query: 121 PKSMVYK--AIEKVTKSDHHVGSGKTTTSSHKQQPNAINISGENLGAVMEIVE-SKREGG 180
K ++K +EKVTKSD + K +S QQPNAINI GEN+GAVMEIVE SKREGG
Sbjct: 121 QKPGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQQPNAINIKGENVGAVMEIVESSKREGG 180
Query: 181 HVIKK-KETVRGILNS--ITNDQNNEDSKDHKAEGQKALNSMPASTFLNSNFQSVNNSLL 240
H+IKK KET RGILN+ + NDQNNE SK +SMP +TFLNSNFQSVNNSLL
Sbjct: 181 HMIKKIKETARGILNNNDMANDQNNEASKTTN-------SSMPTNTFLNSNFQSVNNSLL 240
Query: 241 YGASLAHRDPGLHLSFSRNPTGDRFTHDDKKQQHKKY 261
Y A+L +RDPGLHLSFSRNPTGDRF DDKKQ H KY
Sbjct: 241 YNANLTYRDPGLHLSFSRNPTGDRFPVDDKKQHHTKY 268
BLAST of Tan0017872 vs. ExPASy TrEMBL
Match:
A0A1S3AVL1 (uncharacterized protein LOC103483156 OS=Cucumis melo OX=3656 GN=LOC103483156 PE=4 SV=1)
HSP 1 Score: 281.6 bits (719), Expect = 3.4e-72
Identity = 175/277 (63.18%), Postives = 196/277 (70.76%), Query Frame = 0
Query: 1 MAGR-FGRSLYRFSSVNRPAAPGGNTSSQDLNQYDGRRYPSATKDTSDE---------LR 60
MAGR FGR +YRFSS NRP AP NTS QD QYD R+YPSAT+DTS E LR
Sbjct: 1 MAGRNFGR-MYRFSSANRPLAPATNTSGQDSAQYDRRQYPSATRDTSLEPRSSPPRISLR 60
Query: 61 PTRSPL-LSPTFSVKKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEVE 120
PL SPT+S+KKA SPPSSPP YR R I SP K +DEYP YKP T+ RSPE +
Sbjct: 61 KDDPPLPASPTYSIKKATSPPSSPP-YRGMAAREISSPPKMVDEYPKYKPITQPRSPEAK 120
Query: 121 PKSMVYK--AIEKVTKSDHHVGSGKTTTSSHKQQPNAINISGENLGAVMEIVE-SKREGG 180
K ++K +EKVTKSD + K +S QQPNAINI GEN+GAVMEIVE SKREGG
Sbjct: 121 QKPGIHKTTTVEKVTKSDRYHEPSKAVSSHKGQQPNAINIKGENVGAVMEIVESSKREGG 180
Query: 181 HVIKK-KETVRGILNS--ITNDQNNEDSKDHKAEGQKALNSMPASTFLNSNFQSVNNSLL 240
H+IKK KET RGILN+ + NDQNNE SK +SMP +TFLNSNFQSVNNSLL
Sbjct: 181 HMIKKIKETARGILNNNDMANDQNNEASKTTN-------SSMPTNTFLNSNFQSVNNSLL 240
Query: 241 YGASLAHRDPGLHLSFSRNPTGDRFTHDDKKQQHKKY 261
Y A+L +RDPGLHLSFSRNPTGDRF DDKKQ H KY
Sbjct: 241 YNANLTYRDPGLHLSFSRNPTGDRFPVDDKKQHHTKY 268
BLAST of Tan0017872 vs. ExPASy TrEMBL
Match:
A0A0A0L3R5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1)
HSP 1 Score: 271.9 bits (694), Expect = 2.7e-69
Identity = 177/280 (63.21%), Postives = 199/280 (71.07%), Query Frame = 0
Query: 1 MAGR-FGRSLYRFSSVNRPAAPGGNTSSQDLNQYDGRRYPSATKDTSDE---------LR 60
MAGR FGR LYRFSS NRP AP NTS QD QYDGRRYPS+ +DTS E LR
Sbjct: 1 MAGRNFGR-LYRFSSANRPLAPVTNTSGQDSAQYDGRRYPSSARDTSLEPRSSPPRVALR 60
Query: 61 PTRSPL-LSPTFSVKKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEVE 120
PL SPT+S+KKA SPPSS PSYRA R I SP+K +DEYP YKP T+ RSPE +
Sbjct: 61 RDDQPLPASPTYSIKKATSPPSS-PSYRAPAARGISSPTKTVDEYPKYKPNTQPRSPEAK 120
Query: 121 PKSMVY--KAIEKVTKSDHHVGSGKTTTSSHK--QQPNAINISGENLGAVMEIVE-SKRE 180
K ++ +EKVTKSD + S K T SSHK QPNAINI GEN+GAVMEIVE SKRE
Sbjct: 121 QKPGIFHKSTVEKVTKSDRYHESSK-TLSSHKGQLQPNAINIKGENVGAVMEIVESSKRE 180
Query: 181 GGHVIKK-KETVRGILNS--ITNDQNNEDSKDHKAEGQKALNSMPASTFLNSNFQSVNNS 240
GGH+IKK KET RGILN+ + NDQNNE SK +SMP +TFLNSNFQSVNNS
Sbjct: 181 GGHMIKKIKETARGILNNNDMANDQNNEASKAPN-------SSMPTNTFLNSNFQSVNNS 240
Query: 241 LLYGASLAHRDPGLHLSFSRNPTGDRFTHDD-KKQQHKKY 261
LLY A+L HRDPGLHL+FSRNPTG+R DD KKQ H +Y
Sbjct: 241 LLYNANLTHRDPGLHLAFSRNPTGERSGVDDHKKQHHTRY 270
BLAST of Tan0017872 vs. ExPASy TrEMBL
Match:
A0A6J1INF1 (uncharacterized protein LOC111479075 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479075 PE=4 SV=1)
HSP 1 Score: 222.6 bits (566), Expect = 1.9e-54
Identity = 144/263 (54.75%), Postives = 174/263 (66.16%), Query Frame = 0
Query: 1 MAGRFGRSLYRFSSVNRPAAPGGNTSSQDLNQYDGRRYPSATKDTSDELRPTRSPLLSPT 60
MA RFGRSLYRFSSVNRP AP RYPS E RP+ SP P
Sbjct: 1 MAARFGRSLYRFSSVNRPTAP-------------APRYPST------EPRPS-SPTTEP- 60
Query: 61 FSVKKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEVEPKSMVYKAIEK 120
+ ASPPSS R+I SP P+ +YP +SPE + K+MV+K +EK
Sbjct: 61 ----RPASPPSS---------RLIASPPNPVHKYP--------KSPEPKQKAMVHKGVEK 120
Query: 121 VTKSDHHVGSGKTTTSSHKQQPNAINISGENLGAVMEIVE-SKREGGHVIKKKETVRGIL 180
KS+ ++ SG+T + QQPNAINI+GEN+GAVMEIVE SK EGGHV+KKKET RG++
Sbjct: 121 AAKSERYLDSGRTQKA---QQPNAINIAGENVGAVMEIVESSKGEGGHVMKKKETPRGVV 180
Query: 181 NS---ITNDQNNEDSKDHKAEGQK--ALNSMPASTFLNSNFQSVNNSLLYGASLAHRDPG 240
++ NDQ+ + SK HKA QK A +S+P +TFLN+NFQSVNNSLL+ ASLAHRDPG
Sbjct: 181 SNADDTVNDQDKDASKHHKAGAQKAPASSSLPTTTFLNNNFQSVNNSLLFDASLAHRDPG 218
Query: 241 LHLSFSRNPTGDRFTHDDKKQQH 258
LHL+FSRN TGDRFT DDKKQ H
Sbjct: 241 LHLAFSRNRTGDRFTLDDKKQHH 218
BLAST of Tan0017872 vs. TAIR 10
Match:
AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )
HSP 1 Score: 65.5 bits (158), Expect = 7.4e-11
Identity = 64/246 (26.02%), Postives = 98/246 (39.84%), Query Frame = 0
Query: 64 KKAASPPSSPPSYRASTVRMIRSPSKPIDEYPNYKPTTRSRSPEVEPKSMVYKAIEKVTK 123
+K SPPS S R++T +++ S E P+ R SP P S+++ E K
Sbjct: 137 RKPNSPPSPAHSSRSTTSESVKTRSPSESENHRKAPSPRVLSPYSLPASLLHSERETTQK 196
Query: 124 -------------SDHHVGS------------------------GKTTTSSHKQQPNA-- 183
++HH + G H+Q ++
Sbjct: 197 NILTAEKTSQTHETNHHNQNHNHDYNQNHNYNQNHSYNQNQNHQGNNPKKMHRQPSSSDS 256
Query: 184 --------INISGENLGAVMEIVES---KREGGHVIKKKETVRGILNSITNDQNNEDSKD 243
I I+GEN GAVMEI+ S + GG G Q++ S
Sbjct: 257 ENIMSTRVITIAGENKGAVMEILRSPQGNKTGGSGTHSSRVSHGTGEKGRRLQSSSSSSS 316
Query: 244 HKAEGQKAL---------NSMPASTFLNSNFQSVNNSLLYGASLAHRDPGLHLSFSRNPT 251
+ EG+K +++P F+NSN Q +NNS++Y ++ +H DPG+HL SR P
Sbjct: 317 DEGEGKKKTTKNVPNKGNSNLPMKAFMNSNVQMINNSIVYNSTASHHDPGVHLKISRKPG 376
BLAST of Tan0017872 vs. TAIR 10
Match:
AT1G63310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20362.1); Has 78 Blast hits to 77 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 37/126 (29.37%), Postives = 54/126 (42.86%), Query Frame = 0
Query: 118 IEKVTKSDHHVGSGKTTTSSHKQQPNAINI---SGENLGAVMEIVESKREGGHVIKKKET 177
++ + S H+G K S + ++ + I + SG NLGA M+ G
Sbjct: 23 LKNMISSLTHMGGDKAGPSQYDEEEDGIRVITLSGSNLGATMKTELDNNHG--------- 82
Query: 178 VRGILNSITNDQNNEDSKDHKAEGQKALNSMPASTFLNSNFQSVNNSLLYGASLAHRDPG 237
DQN + D ST++NSNFQ+VNNS++ GA DPG
Sbjct: 83 --------DRDQNGDHELDF------------LSTYVNSNFQAVNNSIMIGAKYETHDPG 119
Query: 238 LHLSFS 241
+HL S
Sbjct: 143 VHLDIS 119
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022147459.1 | 6.3e-81 | 65.82 | serine/arginine repetitive matrix protein 1-like [Momordica charantia] | [more] |
XP_008437848.1 | 7.0e-72 | 63.18 | PREDICTED: uncharacterized protein LOC103483156 [Cucumis melo] >KAA0048861.1 zyx... | [more] |
XP_038879892.1 | 9.2e-72 | 63.04 | uncharacterized protein At1g10890-like isoform X1 [Benincasa hispida] | [more] |
XP_004133795.1 | 5.6e-69 | 63.21 | DNA-directed RNA polymerase II subunit RPB1 [Cucumis sativus] >KGN56393.1 hypoth... | [more] |
XP_038879901.1 | 8.9e-67 | 61.23 | uncharacterized protein LOC120071611 isoform X2 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1D126 | 3.1e-81 | 65.82 | serine/arginine repetitive matrix protein 1-like OS=Momordica charantia OX=3673 ... | [more] |
A0A5A7U5I8 | 3.4e-72 | 63.18 | Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00740 PE=... | [more] |
A0A1S3AVL1 | 3.4e-72 | 63.18 | uncharacterized protein LOC103483156 OS=Cucumis melo OX=3656 GN=LOC103483156 PE=... | [more] |
A0A0A0L3R5 | 2.7e-69 | 63.21 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1 | [more] |
A0A6J1INF1 | 1.9e-54 | 54.75 | uncharacterized protein LOC111479075 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
Match Name | E-value | Identity | Description | |
AT2G46630.1 | 7.4e-11 | 26.02 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP... | [more] |
AT1G63310.1 | 1.2e-05 | 29.37 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |