Tan0017674 (gene) Snake gourd v1

Overview


Name	Tan0017674
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L28-1-like
Location	LG08: 736940 .. 741278 (+)
RNA-Seq Expression	Tan0017674
Synteny	Tan0017674

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTCAGTAAAGCTATATAAGATCAGTCGGGGCTGAAGAGAACGGCAGACGGAACCGGCGTACTCTCCTCTGTTTCTGCGTCTCTCTTCGACTTGTTGCAGCACAGGTCCGTTCCTTCTTCCACCTTTTAGATCTTCTTTTTCTCTTTCATTTTCATCATCTTCAATCAGATTTTTCCCATTTTTCGGATTTCCATTTTGTATATCTCATATCAACTGGCATCCTTACTTTTATTTATTGCTGATCTTCGGAATATATCTGTTTCTTATTCGTTCTCATAGTTTATTGAATTATTTCGTAGATGGCGAACGTTCCGGGGCAGTTGGTCTGGGAAATCGTTAAGAATAACAGTTCCTTCCTCGTTAAAGAGTTTGGCAGAGGCAATGCTAGTGTTCAATTCAGCAAAGAGCCTAACAACCTCTACAACCTCAACTCCTACAAGCATTCCGGTTAGATTCGAATCAGTAATCTGTTTCCCTCTTTTACTTGTTTAGTACAATCGTTTAAAATTGAGCAAAATATGAAGAATCAATTGGCATTTGTGTTTTGTGCTTTTTCTTTGGGAATGTCTATTAAATCTTGTTTGGGGGTCTCTTACAGGCTTGGCAAACCGTAAGACAGTAACCGTTCAGGCAGGAGGCAAGGATTTGTCAGTATTGCTTGCGACAACCAAGACGAAGAAGCAGAGCAAACCCGCGAGTTTGCTCCACAAATCAGTCATGAGGAAGGAATTTCCTCGCATGGCCAAGGCAGTGACTAATCAGGTAACTACCATTGGTTGTTAATTCAATTCAGATTTTTTAATTGATGCCCACTGCGATGAAATATGTGTTTGCCAAATCAATTCAATTCCTGCTGTTTGTTAATTCTGCCTGCATTTACCATTGATTGTGCTTTTTAAGTCATCAGCTCTTTGTTTCTACTTCTCATCACTTCTTGTGTGTTTAAGAAGCAGCCCATAAAGCCTTTTCTGTTTTATAGTTTTTTTAGAGATTGGAATTGAATGCATTGTTGCAGTGACGAGAAGCTAACATGTAAGAAGGGCTGCTTTTGTAGCGGCATCTTCAGTGAAATATATTTGTTACGCTTGGCTTCTGAGCACAATTTTCCATTGTCTACCATATTAGACTGTTGGAGGTCATGGTCATATGTAATGATTAGATGCTTTATGGTAATGAGTTATATATTTGCTGTTAAATCAACCATCAACCCAAAGGCTTAAGTTGATGGGTTATGGTAAATTTAATTATATCATTCCTCCAATACTCCCTACACATGTATTTGAAAATTTGTTAGAAGGACCAACAAGTGAAAATCAATATTAATTGTCTACCATATTAACTGCTTTAGATGCTTTATGTAATAAATTGAGCCGAATGTGGATTGTTGCAGTGACGAGAAGCTAACATGTAAGAAGGGCCGCTTTTGTAGCAGCATCTTCAATGAAATATATTTGTTACGCTTGGCTTCTGAGCACAATCTTCCCTTGTCTATATCATACCAGACTGTTGAATATCATGTTGAGATCATATGTAATGATTTATTTGTGTGGTTTATGTTAATGAGTTAACTAATATATTATCTGATTGCTTTCTTTCCAGAACTTGTATTAATATCATACTGCAGTGCACAAGATAGTTGTGGAAAAACTAGGTGATCCAAAGTTCTATTGGATAGTTTATTTGGTCAAGCATTAAAACTATTAATGCAATGATGGCCCAAGTATTATTTCATCAAAGATGCTGCCACAAAAGCATAGCGCATACCCTGACCAAGGCCCAAAATTGTGAATTACCCATCCTCACATGTTGTCGACAAAAAAAAACTTAAAACTGATTGTGCGATGATGACCTGCTAACATGTAAGGAGGTCACTTTTGTAGTGGCATCTTCAATGAAATCCTTTTGTTACGCTTGGCTTCTGAGCATTAAATCTCCTCTGGGCTGCAAACAACTTCTATCTTTTATTTGCTTTGCTTGATTGATCTCTGATTATATTCCTTAAACACTTTTCTTCATGTAATCTTCCCGAACTTCCTCGTCTAGCATAATAACAAACTTTTGTTAATACTATAAGTTAAGGAAAGACTAGGGATGGTTGCAAACTCAACTGTTACTGCGATGATGAGCTGCTAACATGTAAGAAGGTGTCGCTTTTGTAGTGGCATCTTCAATGAAATCCATTTGTTACGCTTGGCTTCTGAGCATTAATTTTTATGTATATTCGTTGTGAAGTATTCTACTCTCTCTCTATATATATTGGTTGCTTCTGATTGCATGAAATTAGATGTGTCTTAATCTGTTGTTTTCTCAAGTAATTTTTTAATTAATAACCGAACTTTCATTAATAAAAAAAATGAAAGTAGATGTGGGTATCTGTTAGATCAATCGGCTTGATTCAGTGAGTGTACTTGTTGAATTTTGCAGGTTGCTGACAATTACTACCGCCCGGACTTGAAGAAGGCTGCCCTTGCTAAGCTAAGTGCAGTTTACAGGAGCCTTAAGGTTGCCAAGTCTGGTGTGAAGAAGAGGAACAGGCAGGCTATTAAGACCCGCGGTAGGAACTGAAACAATGGTTTACAGAAGGATTTTTGCCCTATTTGAGTTTTTTTTACCCCCTTTTCCACCTTTCTAAAGAGAGACTTGCTGGGCTTTTATTTACTTTTAAATTCTTATGTACCCTACTTGAAATTTAGGATTTTTGACCATCCCATTTCGATTTTGGTTTATATTTTAGCTCATTCCCTTCGGAGTTTTGTTATTTTTTTTAATGTAGTTTTTAAAAGGATTAGTTTAAATGTGAATCTTTTTTTTTTTTTTTTTTGAAGAAGAAGTTAAAATATGAATCATGTATACCAAGATAATTCTCTCTTTGATGGTTGTTTTCTCGCTGGATTATTACCCATAATCTCTCTTATATAGCTCATCTTAATTTGAAGTTTATTTTTCGCCCGGAAATGACCTTACATCTAAGATATTAATGATTGAATACATTATTTTGATTAAAAAGAGCTGAGTAAATAAATATACCGTCGTTCAATTTGTCATTTCGCCAGTATTATCATATCAGTATGTTGGAAGTGTTAAAATGTATGGATTCTAATAAGCAGTTGTTTTCTCAGGTGATTTTAAATTTGAATAGATTTCGAATGAATTTTGTTACTATATTTTATGAAATTGGATGATACGAAATCTTAGAATTTCAGGCTAAGAAAAAGTTTATTTGGTAGGGTGTCATGAAAATTTATTGAGTATCTAACAATTTGAATTTCCTCAGCCACATGTCGCATTGAAAAAAACTTTTTATATAATAATTTAGCATTTGAAGTGGGTTTTTTTTTCCTAGTAAACATTTACATCTGTAAGGGGTAGTTTTTTTAGCCAAATATGCAGACTTGAAGAGTAGGAGTTTCCATTTTGACGCCTCACACGTTTCTTCCAGACGTTCTCTCTATATGTGATGCTTTATGGTTAGTCCTTTTGCCGTTTTTATATGGATCTTTCCCCTTTGTGATGTTTTCTCTTATTCTCCCTTCAAGTTAGTTCCTTTGATTTTTATTGTTGATCATACATGTTTTTCTTCGATTCTTCTTGGGTTTTTATTTTTTTGTGTTTTGTTTCTTTATGTTGAGTTGGTGTGCTTGGTAGGGGTTGTTGATTTCTTGAAGCTTGGTGGGAGGGGGGCATGAATTCAACAGTAGGTAAGTATTTCTGCACCATTTTTTTTACTATGACCTCTCTGTTTTGGTTGAAATATAGTGTTTACTTTCGTTATTTCAACTATTCTCTCATCTTTGTTTTGTTACTTTTTCTCTTCTTTTTCTTTCTCTGTTTACTTGTACACTATTTATATATTTGAATCAAATTAGATTTAATGCCATGAATATAAGGGATGTTTCGATGTTTCTCTAATTTCACTCTATATAATGGAATGCCACATTAGAAAGTTTTTTAGCACAACTCCAAGGCATCCACACAACTCCAACGTGAGTCTCTCCATCTTTCATATTCACAAATCAAATGAAGACGTTCAACTTCTCGGCTGTCCCAATGGAAGATAAACGATAGTACTACACGTACCTGCTTGGAAGAACGGAATGACTCAGGTTGCTTCGCCCTCTTTTGTGCTCTTATGGAGTTGGATGATATATATTGATTCCATATTTTTTATTTGTAAAATTAACAACCTTCGACAGTCTTATGAACTGATATGTTTAGTATAATGGGCATCAACTTATATTTATTTCTGTTGTAACAAACTTGTTCCTTATTGGCCATTTGATGTATTTGTTTGTAAAACGAACTTGGTTTTTATTCATATTATATTTTTTTGTTCAA

mRNA sequence

GTTTTTCAGTAAAGCTATATAAGATCAGTCGGGGCTGAAGAGAACGGCAGACGGAACCGGCGTACTCTCCTCTGTTTCTGCGTCTCTCTTCGACTTGTTGCAGCACAGATGGCGAACGTTCCGGGGCAGTTGGTCTGGGAAATCGTTAAGAATAACAGTTCCTTCCTCGTTAAAGAGTTTGGCAGAGGCAATGCTAGTGTTCAATTCAGCAAAGAGCCTAACAACCTCTACAACCTCAACTCCTACAAGCATTCCGGCTTGGCAAACCGTAAGACAGTAACCGTTCAGGCAGGAGGCAAGGATTTGTCAGTATTGCTTGCGACAACCAAGACGAAGAAGCAGAGCAAACCCGCGAGTTTGCTCCACAAATCAGTCATGAGGAAGGAATTTCCTCGCATGGCCAAGGCAGTGACTAATCAGGTTGCTGACAATTACTACCGCCCGGACTTGAAGAAGGCTGCCCTTGCTAAGCTAAGTGCAGTTTACAGGAGCCTTAAGGTTGCCAAGTCTGGTGTGAAGAAGAGGAACAGGCAGGCTATTAAGACCCGCGGTAGGAACTGAAACAATGGTTTACAGAAGGATTTTTGCCCTATTTGAGTTTTTTTTACCCCCTTTTCCACCTTTCTAAAGAGAGACTTGCTGGGCTTTTATTTACTTTTAAATTCTTATGTACCCTACTTGAAATTTAGGATTTTTGACCATCCCATTTCGATTTTGGTTTATATTTTAGCTCATTCCCTTCGGAGTTTTGTTATTTTTTTTAATGTAGTTTTTAAAAGGATTAGTTTAAATGTGAATCTTTTTTTTTTTTTTTTTTGAAGAAGAAGTTAAAATATGAATCATGTATACCAAGATAATTCTCTCTTTGATGGTTGTTTTCTCGCTGGATTATTACCCATAATCTCTCTTATATAGCTCATCTTAATTTGAAGTTTATTTTTCGCCCGGAAATGACCTTACATCTAAGATATTAATGATTGAATACATTATTTTGATTAAAAAGAGCTGAGTAAATAAATATACCGTCGTTCAATTTGTCATTTCGCCAGTATTATCATATCAGTATGTTGGAAGTGTTAAAATGTATGGATTCTAATAAGCAGTTGTTTTCTCAGGTGATTTTAAATTTGAATAGATTTCGAATGAATTTTGTTACTATATTTTATGAAATTGGATGATACGAAATCTTAGAATTTCAGGCTAAGAAAAAGTTTATTTGGTAGGGTGTCATGAAAATTTATTGAGTATCTAACAATTTGAATTTCCTCAGCCACATGTCGCATTGAAAAAAACTTTTTATATAATAATTTAGCATTTGAAGTGGGTTTTTTTTTCCTAGTAAACATTTACATCTGTAAGGGGTAGTTTTTTTAGCCAAATATGCAGACTTGAAGAGTAGGAGTTTCCATTTTGACGCCTCACACGTTTCTTCCAGACGTTCTCTCTATATGTGATGCTTTATGGTTAGTCCTTTTGCCGTTTTTATATGGATCTTTCCCCTTTGTGATGTTTTCTCTTATTCTCCCTTCAAGTTAGTTCCTTTGATTTTTATTGTTGATCATACATGTTTTTCTTCGATTCTTCTTGGGTTTTTATTTTTTTGTGTTTTGTTTCTTTATGTTGAGTTGGTGTGCTTGGTAGGGGTTGTTGATTTCTTGAAGCTTGGTGGGAGGGGGGCATGAATTCAACAGTAGGTAAGTATTTCTGCACCATTTTTTTTACTATGACCTCTCTGTTTTGGTTGAAATATAGTGTTTACTTTCGTTATTTCAACTATTCTCTCATCTTTGTTTTGTTACTTTTTCTCTTCTTTTTCTTTCTCTGTTTACTTGTACACTATTTATATATTTGAATCAAATTAGATTTAATGCCATGAATATAAGGGATGTTTCGATGTTTCTCTAATTTCACTCTATATAATGGAATGCCACATTAGAAAGTTTTTTAGCACAACTCCAAGGCATCCACACAACTCCAACGTGAGTCTCTCCATCTTTCATATTCACAAATCAAATGAAGACGTTCAACTTCTCGGCTGTCCCAATGGAAGATAAACGATAGTACTACACGTACCTGCTTGGAAGAACGGAATGACTCAGGTTGCTTCGCCCTCTTTTGTGCTCTTATGGAGTTGGATGATATATATTGATTCCATATTTTTTATTTGTAAAATTAACAACCTTCGACAGTCTTATGAACTGATATGTTTAGTATAATGGGCATCAACTTATATTTATTTCTGTTGTAACAAACTTGTTCCTTATTGGCCATTTGATGTATTTGTTTGTAAAACGAACTTGGTTTTTATTCATATTATATTTTTTTGTTCAA

Coding sequence (CDS)

ATGGCGAACGTTCCGGGGCAGTTGGTCTGGGAAATCGTTAAGAATAACAGTTCCTTCCTCGTTAAAGAGTTTGGCAGAGGCAATGCTAGTGTTCAATTCAGCAAAGAGCCTAACAACCTCTACAACCTCAACTCCTACAAGCATTCCGGCTTGGCAAACCGTAAGACAGTAACCGTTCAGGCAGGAGGCAAGGATTTGTCAGTATTGCTTGCGACAACCAAGACGAAGAAGCAGAGCAAACCCGCGAGTTTGCTCCACAAATCAGTCATGAGGAAGGAATTTCCTCGCATGGCCAAGGCAGTGACTAATCAGGTTGCTGACAATTACTACCGCCCGGACTTGAAGAAGGCTGCCCTTGCTAAGCTAAGTGCAGTTTACAGGAGCCTTAAGGTTGCCAAGTCTGGTGTGAAGAAGAGGAACAGGCAGGCTATTAAGACCCGCGGTAGGAACTGA

Protein sequence

MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQAGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALAKLSAVYRSLKVAKSGVKKRNRQAIKTRGRN

Homology

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BLAST of Tan0017674 vs. ExPASy Swiss-Prot
Match: O82204 (60S ribosomal protein L28-1 OS=Arabidopsis thaliana OX=3702 GN=RPL28A PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.8e-54
Identity = 105/143 (73.43%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MA VPGQL+WEIVKNN+ FLVK+FGRGN+ VQFSKE NNL N++SYKHSGLAN+KTVT+Q
Sbjct: 1   MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
           A  KD +V+LATTKTKKQ+KP   ++KS+++KEFPRM+KAV NQV DNYYRPDLKKAALA
Sbjct: 61  AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQA 144
           +LSA+ + L+VAKSG K+RNRQA
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA 143

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BLAST of Tan0017674 vs. ExPASy Swiss-Prot
Match: Q9M0E2 (60S ribosomal protein L28-2 OS=Arabidopsis thaliana OX=3702 GN=RPL28C PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 9.8e-53
Identity = 103/143 (72.03%), Postives = 123/143 (86.01%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MA VPGQL+WEIVK N+ FLVK+FGRGNA VQFSKE NNL N+NSYKHSGLAN+KTVT+Q
Sbjct: 1   MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
           A GKD  V+L TTKTK+Q+KP   ++KS+++KEF RM+K V NQV DNYYRPDLKKAALA
Sbjct: 61  AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQA 144
           +LSA+ + L+VAKSG K+RNRQA
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA 143

[Close]

BLAST of Tan0017674 vs. ExPASy Swiss-Prot
Match: Q962T2 (60S ribosomal protein L28 OS=Spodoptera frugiperda OX=7108 GN=RpL28 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12
Identity = 54/143 (37.76%), Postives = 77/143 (53.85%), Query Frame = 0


Query: 8   LVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQAGGKDLS 67
           L W I++NN++FLVK   + N    FSKEPNN+ NLNSY+++GL  +K V V        
Sbjct: 5   LNWMIIRNNNAFLVK---KRNIKKPFSKEPNNVTNLNSYRYNGLIQKKAVGVVENPDRKG 64

Query: 68  VLLATTKTKKQSKPASLLHKSVMRKEFPRMAK----AVTNQVADNYYRPDLKKAALAKLS 127
             +   K K  +KPA    K+ +R++F   A+     V   +  N+YR DL KA L + S
Sbjct: 65  FTVVYKKAKATNKPA----KNAVRRQFKAGARRSLYKVKRLLKANHYRTDLSKATLRRAS 124

Query: 128 AVYRSLKVAKSGVKKRNRQAIKT 147
           A+ RS +  K+  KK      KT
Sbjct: 125 AILRSQRPIKA--KKPKAAVAKT 138

[Close]

BLAST of Tan0017674 vs. ExPASy Swiss-Prot
Match: Q3T0L7 (60S ribosomal protein L28 OS=Bos taurus OX=9913 GN=RPL28 PE=2 SV=3)

HSP 1 Score: 72.8 bits (177), Expect = 3.7e-12
Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 8   LVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQAGGKDLS 67
           L W +V+N SSFL+K          +S EPNNL   NS++++GL +RKTV V+       
Sbjct: 5   LQWMVVRNCSSFLIK-----RNKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKG 64

Query: 68  VLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALAKLSAVYR 127
           V++   +   Q KPA+   ++ + K       ++ + +  N YRPDL+ AA+ + SA+ R
Sbjct: 65  VVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 122

Query: 128 SLK 131
           S K
Sbjct: 125 SQK 122

[Close]

BLAST of Tan0017674 vs. ExPASy Swiss-Prot
Match: P17702 (60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4)

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-12
Identity = 48/134 (35.82%), Postives = 73/134 (54.48%), Query Frame = 0


Query: 8   LVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQAGGKDLS 67
           L W +V+N SSFL+K          +S EPNNL   NS++++GL +RKTV V+A      
Sbjct: 5   LQWMVVRNCSSFLIK-----RNKQTYSTEPNNLKARNSFRYNGLIHRKTVGVEAWPDGKG 64

Query: 68  VLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALAKLSAVYR 127
           V++   +   Q KPA+   ++ + K       ++ + +  N YRPDL+ AA+ + SA+ R
Sbjct: 65  VVVVMKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILR 124

Query: 128 SLKVAKSGVKKRNR 142
           S K     V KR R
Sbjct: 125 SQKPV---VVKRKR 130

[Close]

BLAST of Tan0017674 vs. NCBI nr
Match: XP_038889445.1 (60S ribosomal protein L28-1-like [Benincasa hispida])

HSP 1 Score: 267.7 bits (683), Expect = 6.1e-68
Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MANVPGQLVWEIVK NSSFL KEFGRGNAS+QFSKEPNNLYNLNSYKHSGLAN+KTVT+Q
Sbjct: 1   MANVPGQLVWEIVKKNSSFLFKEFGRGNASIQFSKEPNNLYNLNSYKHSGLANQKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
            GGKDLSVLLATTKTKKQ+KPASLLHKS+MRKEFPRMAKAVTNQVADNYYRPDLK AALA
Sbjct: 61  PGGKDLSVLLATTKTKKQNKPASLLHKSIMRKEFPRMAKAVTNQVADNYYRPDLKNAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQAIKTRGR 150
           KLSAV+RSLKVAKSGVKKRNRQA++TRGR
Sbjct: 121 KLSAVHRSLKVAKSGVKKRNRQAVRTRGR 149

[Close]

BLAST of Tan0017674 vs. NCBI nr
Match: XP_022938097.1 (60S ribosomal protein L28-2-like [Cucurbita moschata])

HSP 1 Score: 265.8 bits (678), Expect = 2.3e-67
Identity = 136/149 (91.28%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MANVPGQLVWEIVK NSSFLVKEFGRGNA VQFSKEPNNLYNLNSYKHSGLANRKTVT+Q
Sbjct: 1   MANVPGQLVWEIVKKNSSFLVKEFGRGNAGVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
           AGGKDLS+L+ATTKTKKQ+KPASLLHKS+ RKEFPRM K VTNQVADNYYRPDLK AALA
Sbjct: 61  AGGKDLSILIATTKTKKQNKPASLLHKSITRKEFPRMVKTVTNQVADNYYRPDLKNAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQAIKTRGR 150
           KLSAV+RSLKVA+SGVKKRNRQAIKTRGR
Sbjct: 121 KLSAVHRSLKVARSGVKKRNRQAIKTRGR 149

[Close]

BLAST of Tan0017674 vs. NCBI nr
Match: XP_022154747.1 (60S ribosomal protein L28-1-like [Momordica charantia])

HSP 1 Score: 265.0 bits (676), Expect = 3.9e-67
Identity = 137/149 (91.95%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MANVPGQLVWEIVK N+SFLVKEFGRGNA VQFSKEPNNLYNLNSYKHSGLANRKTVT+Q
Sbjct: 1   MANVPGQLVWEIVKKNNSFLVKEFGRGNAGVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
            GGKDLSVLLATTK KKQ+KPASLLH+SVMRKEFPRMAKAV NQVADNYYRPDLKKAALA
Sbjct: 61  PGGKDLSVLLATTKAKKQNKPASLLHRSVMRKEFPRMAKAVINQVADNYYRPDLKKAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQAIKTRGR 150
           KLS V+RSLKVAKSGVKKRNRQA+KTRGR
Sbjct: 121 KLSVVHRSLKVAKSGVKKRNRQALKTRGR 149

[Close]

BLAST of Tan0017674 vs. NCBI nr
Match: KAG6586468.1 (60S ribosomal protein L28-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263.8 bits (673), Expect = 8.7e-67
Identity = 135/149 (90.60%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           M NVPGQLVWEIVK NSSFLVKEFGRGNA VQFSKEPNNLYNLNSYKHSGLANRKTVT+Q
Sbjct: 1   MPNVPGQLVWEIVKKNSSFLVKEFGRGNAGVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
           AGGKDLS+L+ATTKTKKQ+KPASLLHKS+ RKEFPRM K VTNQVADNYYRPDLK AALA
Sbjct: 61  AGGKDLSILIATTKTKKQNKPASLLHKSITRKEFPRMVKTVTNQVADNYYRPDLKNAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQAIKTRGR 150
           KLSAV+RSLKVA+SGVKKRNRQAIKTRGR
Sbjct: 121 KLSAVHRSLKVARSGVKKRNRQAIKTRGR 149

[Close]

BLAST of Tan0017674 vs. NCBI nr
Match: KAG7021324.1 (60S ribosomal protein L28-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 262.3 bits (669), Expect = 2.5e-66
Identity = 134/149 (89.93%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MANVPGQL WEIVK NSSFLVKEFGRGNA VQFSKEPNNLYNLNSYKHSGLANRKTVT+Q
Sbjct: 1   MANVPGQLAWEIVKKNSSFLVKEFGRGNAGVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
            GGKDLS+L+ATTKTKKQ+KPASLLHKS+ RKEFPRM K VTNQVADNYYRPDLK AALA
Sbjct: 61  EGGKDLSILIATTKTKKQNKPASLLHKSITRKEFPRMVKTVTNQVADNYYRPDLKNAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQAIKTRGR 150
           KLSAV+RSLKVA+SGVKKRNRQAIKTRGR
Sbjct: 121 KLSAVHRSLKVARSGVKKRNRQAIKTRGR 149

[Close]

BLAST of Tan0017674 vs. ExPASy TrEMBL
Match: A0A6J1FD25 (60S ribosomal protein L28-2-like OS=Cucurbita moschata OX=3662 GN=LOC111444289 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 136/149 (91.28%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MANVPGQLVWEIVK NSSFLVKEFGRGNA VQFSKEPNNLYNLNSYKHSGLANRKTVT+Q
Sbjct: 1   MANVPGQLVWEIVKKNSSFLVKEFGRGNAGVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
           AGGKDLS+L+ATTKTKKQ+KPASLLHKS+ RKEFPRM K VTNQVADNYYRPDLK AALA
Sbjct: 61  AGGKDLSILIATTKTKKQNKPASLLHKSITRKEFPRMVKTVTNQVADNYYRPDLKNAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQAIKTRGR 150
           KLSAV+RSLKVA+SGVKKRNRQAIKTRGR
Sbjct: 121 KLSAVHRSLKVARSGVKKRNRQAIKTRGR 149

[Close]

BLAST of Tan0017674 vs. ExPASy TrEMBL
Match: A0A6J1DMI9 (60S ribosomal protein L28-1-like OS=Momordica charantia OX=3673 GN=LOC111021927 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67
Identity = 137/149 (91.95%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MANVPGQLVWEIVK N+SFLVKEFGRGNA VQFSKEPNNLYNLNSYKHSGLANRKTVT+Q
Sbjct: 1   MANVPGQLVWEIVKKNNSFLVKEFGRGNAGVQFSKEPNNLYNLNSYKHSGLANRKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
            GGKDLSVLLATTK KKQ+KPASLLH+SVMRKEFPRMAKAV NQVADNYYRPDLKKAALA
Sbjct: 61  PGGKDLSVLLATTKAKKQNKPASLLHRSVMRKEFPRMAKAVINQVADNYYRPDLKKAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQAIKTRGR 150
           KLS V+RSLKVAKSGVKKRNRQA+KTRGR
Sbjct: 121 KLSVVHRSLKVAKSGVKKRNRQALKTRGR 149

[Close]

BLAST of Tan0017674 vs. ExPASy TrEMBL
Match: A0A6J1HQK6 (60S ribosomal protein L28-2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465713 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 135/149 (90.60%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MANVPGQLVWEIVK NSSFLVKEFGRGNA VQFSKEPNNLY+LNSYKHSGLANRKTVT+Q
Sbjct: 1   MANVPGQLVWEIVKKNSSFLVKEFGRGNAGVQFSKEPNNLYSLNSYKHSGLANRKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
           AGGKDLS+L+ATTKTKKQ+KPASLLHKS+ RKEFPRM K VTNQVADNYYRPDLK AALA
Sbjct: 61  AGGKDLSMLIATTKTKKQNKPASLLHKSITRKEFPRMLKTVTNQVADNYYRPDLKNAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQAIKTRGR 150
           KLSAV+RSLKVAKSGVK RNRQAIKTRGR
Sbjct: 121 KLSAVHRSLKVAKSGVKTRNRQAIKTRGR 149

[Close]

BLAST of Tan0017674 vs. ExPASy TrEMBL
Match: A0A6J1KHD5 (60S ribosomal protein L28-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493869 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.0e-66
Identity = 134/149 (89.93%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MANVPGQLVWEIVK NS FLVKEFGRG+A VQFSKEPNNLYNLNSYKHSGLAN+KTVT+Q
Sbjct: 1   MANVPGQLVWEIVKKNSCFLVKEFGRGSAGVQFSKEPNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
            GGKDLSVLLATTK KKQ+KPASLL+KSVMRKEFP MAKAVTNQVADNYYRPDLKKAALA
Sbjct: 61  PGGKDLSVLLATTKRKKQNKPASLLNKSVMRKEFPSMAKAVTNQVADNYYRPDLKKAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQAIKTRGR 150
           KLSAV+RSLK+AKSGVKKRNRQA++TRGR
Sbjct: 121 KLSAVHRSLKIAKSGVKKRNRQAVRTRGR 149

[Close]

BLAST of Tan0017674 vs. ExPASy TrEMBL
Match: A0A1S3CAX2 (60S ribosomal protein L28-1-like OS=Cucumis melo OX=3656 GN=LOC103498417 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.0e-66
Identity = 135/149 (90.60%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MANVPGQLVWEIVK NSSFLVKEFGRGNASVQFSKEPNNLY+LNSYKHSGLAN KTVT+Q
Sbjct: 1   MANVPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYSLNSYKHSGLANLKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
            GGKDLSVLLAT+KTKKQ+KPA+ LHKSVMRKEFPRMAKAVTNQVADNYYRPDLK AALA
Sbjct: 61  PGGKDLSVLLATSKTKKQNKPANSLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKNAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQAIKTRGR 150
           KLSAV+RSLKVAKSGVKK NRQA++TRGR
Sbjct: 121 KLSAVHRSLKVAKSGVKKGNRQAVRTRGR 149

[Close]

BLAST of Tan0017674 vs. TAIR 10
Match: AT2G19730.1 (Ribosomal L28e protein family )

HSP 1 Score: 211.5 bits (537), Expect = 4.8e-55
Identity = 105/143 (73.43%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MA VPGQL+WEIVKNN+ FLVK+FGRGN+ VQFSKE NNL N++SYKHSGLAN+KTVT+Q
Sbjct: 1   MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
           A  KD +V+LATTKTKKQ+KP   ++KS+++KEFPRM+KAV NQV DNYYRPDLKKAALA
Sbjct: 61  AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQA 144
           +LSA+ + L+VAKSG K+RNRQA
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA 143

[Close]

BLAST of Tan0017674 vs. TAIR 10
Match: AT2G19730.2 (Ribosomal L28e protein family )

HSP 1 Score: 211.5 bits (537), Expect = 4.8e-55
Identity = 105/143 (73.43%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MA VPGQL+WEIVKNN+ FLVK+FGRGN+ VQFSKE NNL N++SYKHSGLAN+KTVT+Q
Sbjct: 1   MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
           A  KD +V+LATTKTKKQ+KP   ++KS+++KEFPRM+KAV NQV DNYYRPDLKKAALA
Sbjct: 61  AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQA 144
           +LSA+ + L+VAKSG K+RNRQA
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA 143

[Close]

BLAST of Tan0017674 vs. TAIR 10
Match: AT2G19730.3 (Ribosomal L28e protein family )

HSP 1 Score: 211.5 bits (537), Expect = 4.8e-55
Identity = 105/143 (73.43%), Postives = 127/143 (88.81%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MA VPGQL+WEIVKNN+ FLVK+FGRGN+ VQFSKE NNL N++SYKHSGLAN+KTVT+Q
Sbjct: 1   MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
           A  KD +V+LATTKTKKQ+KP   ++KS+++KEFPRM+KAV NQV DNYYRPDLKKAALA
Sbjct: 61  AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQA 144
           +LSA+ + L+VAKSG K+RNRQA
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA 143

[Close]

BLAST of Tan0017674 vs. TAIR 10
Match: AT4G29410.1 (Ribosomal L28e protein family )

HSP 1 Score: 207.6 bits (527), Expect = 6.9e-54
Identity = 103/143 (72.03%), Postives = 123/143 (86.01%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MA VPGQL+WEIVK N+ FLVK+FGRGNA VQFSKE NNL N+NSYKHSGLAN+KTVT+Q
Sbjct: 1   MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
           A GKD  V+L TTKTK+Q+KP   ++KS+++KEF RM+K V NQV DNYYRPDLKKAALA
Sbjct: 61  AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQA 144
           +LSA+ + L+VAKSG K+RNRQA
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA 143

[Close]

BLAST of Tan0017674 vs. TAIR 10
Match: AT4G29410.2 (Ribosomal L28e protein family )

HSP 1 Score: 207.6 bits (527), Expect = 6.9e-54
Identity = 103/143 (72.03%), Postives = 123/143 (86.01%), Query Frame = 0


Query: 1   MANVPGQLVWEIVKNNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTVQ 60
           MA VPGQL+WEIVK N+ FLVK+FGRGNA VQFSKE NNL N+NSYKHSGLAN+KTVT+Q
Sbjct: 1   MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60

Query: 61  AGGKDLSVLLATTKTKKQSKPASLLHKSVMRKEFPRMAKAVTNQVADNYYRPDLKKAALA 120
           A GKD  V+L TTKTK+Q+KP   ++KS+++KEF RM+K V NQV DNYYRPDLKKAALA
Sbjct: 61  AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120

Query: 121 KLSAVYRSLKVAKSGVKKRNRQA 144
           +LSA+ + L+VAKSG K+RNRQA
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA 143

The following BLAST results are available for this feature:

BLAST of Tan0017674 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82204	6.8e-54	73.43	60S ribosomal protein L28-1 OS=Arabidopsis thaliana OX=3702 GN=RPL28A PE=1 SV=1	[more]
Q9M0E2	9.8e-53	72.03	60S ribosomal protein L28-2 OS=Arabidopsis thaliana OX=3702 GN=RPL28C PE=2 SV=1	[more]
Q962T2	2.2e-12	37.76	60S ribosomal protein L28 OS=Spodoptera frugiperda OX=7108 GN=RpL28 PE=2 SV=1	[more]
Q3T0L7	3.7e-12	34.96	60S ribosomal protein L28 OS=Bos taurus OX=9913 GN=RPL28 PE=2 SV=3	[more]
P17702	6.4e-12	35.82	60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4	[more]

BLAST of Tan0017674 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889445.1	6.1e-68	91.95	60S ribosomal protein L28-1-like [Benincasa hispida]	[more]
XP_022938097.1	2.3e-67	91.28	60S ribosomal protein L28-2-like [Cucurbita moschata]	[more]
XP_022154747.1	3.9e-67	91.95	60S ribosomal protein L28-1-like [Momordica charantia]	[more]
KAG6586468.1	8.7e-67	90.60	60S ribosomal protein L28-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7021324.1	2.5e-66	89.93	60S ribosomal protein L28-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Tan0017674 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FD25	1.1e-67	91.28	60S ribosomal protein L28-2-like OS=Cucurbita moschata OX=3662 GN=LOC111444289 P...	[more]
A0A6J1DMI9	1.9e-67	91.95	60S ribosomal protein L28-1-like OS=Momordica charantia OX=3673 GN=LOC111021927 ...	[more]
A0A6J1HQK6	2.1e-66	90.60	60S ribosomal protein L28-2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1KHD5	8.0e-66	89.93	60S ribosomal protein L28-1-like OS=Cucurbita maxima OX=3661 GN=LOC111493869 PE=...	[more]
A0A1S3CAX2	8.0e-66	90.60	60S ribosomal protein L28-1-like OS=Cucumis melo OX=3656 GN=LOC103498417 PE=3 SV...	[more]

BLAST of Tan0017674 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19730.1	4.8e-55	73.43	Ribosomal L28e protein family	[more]
AT2G19730.2	4.8e-55	73.43	Ribosomal L28e protein family	[more]
AT2G19730.3	4.8e-55	73.43	Ribosomal L28e protein family	[more]
AT4G29410.1	6.9e-54	72.03	Ribosomal L28e protein family	[more]
AT4G29410.2	6.9e-54	72.03	Ribosomal L28e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029004	Ribosomal L28e/Mak16	PFAM	PF01778	Ribosomal_L28e	coord: 8..104 e-value: 6.1E-26 score: 91.4
None	No IPR available	GENE3D	3.30.390.110		coord: 1..107 e-value: 1.0E-31 score: 111.8
None	No IPR available	PANTHER	PTHR10544:SF19	60S RIBOSOMAL PROTEIN L28-1-LIKE	coord: 1..104
IPR002672	Ribosomal protein L28e	PANTHER	PTHR10544	60S RIBOSOMAL PROTEIN L28	coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017674.1	Tan0017674.1	mRNA
Tan0017674.2	Tan0017674.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006412	translation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0005840	ribosome
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0003735	structural constituent of ribosome