Tan0017569 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACATTACCAGAACCAGTACAGCGCACAATCTGGAACCGACCAGTACGGCAACCCAATTCGGCAAACCGACGAATACGGCAACGTCATCACCGAGACCGGTCCGTACGTCGACCCACTCCGTCGGACTGACGAATTCCGCGAGACGGACCAGTATGGCAACCCGGTTCGCCGGACCGTCGAGTATGGCGCTGGGACGTATGAAGGAGGAGGCGGTGGAATATTTCATCATGATAAGCAGCATACAATGCAATCGGCTTCGACGACGGGTTCCGGCGGGTACACGGCGGCGGAGCCAGGTGTGCACCATGAGAAGAAGGGGATAATGGAGAAGATTAAGGAGAAGCTGCCGGGAGGACACCACTGA ATGGCACATTACCAGAACCAGTACAGCGCACAATCTGGAACCGACCAGTACGGCAACCCAATTCGGCAAACCGACGAATACGGCAACGTCATCACCGAGACCGGTCCGTACGTCGACCCACTCCGTCGGACTGACGAATTCCGCGAGACGGACCAGTATGGCAACCCGGTTCGCCGGACCGTCGAGTATGGCGCTGGGACGTATGAAGGAGGAGGCGGTGGAATATTTCATCATGATAAGCAGCATACAATGCAATCGGCTTCGACGACGGGTTCCGGCGGGTACACGGCGGCGGAGCCAGGTGTGCACCATGAGAAGAAGGGGATAATGGAGAAGATTAAGGAGAAGCTGCCGGGAGGACACCACTGA ATGGCACATTACCAGAACCAGTACAGCGCACAATCTGGAACCGACCAGTACGGCAACCCAATTCGGCAAACCGACGAATACGGCAACGTCATCACCGAGACCGGTCCGTACGTCGACCCACTCCGTCGGACTGACGAATTCCGCGAGACGGACCAGTATGGCAACCCGGTTCGCCGGACCGTCGAGTATGGCGCTGGGACGTATGAAGGAGGAGGCGGTGGAATATTTCATCATGATAAGCAGCATACAATGCAATCGGCTTCGACGACGGGTTCCGGCGGGTACACGGCGGCGGAGCCAGGTGTGCACCATGAGAAGAAGGGGATAATGGAGAAGATTAAGGAGAAGCTGCCGGGAGGACACCACTGA MAHYQNQYSAQSGTDQYGNPIRQTDEYGNVITETGPYVDPLRRTDEFRETDQYGNPVRRTVEYGAGTYEGGGGGIFHHDKQHTMQSASTTGSGGYTAAEPGVHHEKKGIMEKIKEKLPGGHH Homology
BLAST of Tan0017569 vs. ExPASy Swiss-Prot
Match: P28639 (Dehydrin DHN1 OS=Pisum sativum OX=3888 GN=DHN1 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11 Identity = 52/135 (38.52%), Postives = 71/135 (52.59%), Query Frame = 0
BLAST of Tan0017569 vs. ExPASy Swiss-Prot
Match: P28640 (Dehydrin DHN2 OS=Pisum sativum OX=3888 GN=DHN2 PE=2 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.9e-10 Identity = 51/132 (38.64%), Postives = 67/132 (50.76%), Query Frame = 0
BLAST of Tan0017569 vs. ExPASy Swiss-Prot
Match: P09442 (Late embryogenesis abundant protein D-11 OS=Gossypium hirsutum OX=3635 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.3e-10 Identity = 45/119 (37.82%), Postives = 59/119 (49.58%), Query Frame = 0
BLAST of Tan0017569 vs. ExPASy Swiss-Prot
Match: A8CVF3 (Dehydrin DHN1 OS=Avicennia marina OX=82927 GN=DHN1 PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.4e-09 Identity = 68/197 (34.52%), Postives = 77/197 (39.09%), Query Frame = 0
BLAST of Tan0017569 vs. ExPASy Swiss-Prot
Match: P28641 (Dehydrin DHN3 OS=Pisum sativum OX=3888 GN=DHN3 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 7.0e-09 Identity = 54/158 (34.18%), Postives = 67/158 (42.41%), Query Frame = 0
BLAST of Tan0017569 vs. NCBI nr
Match: XP_023553197.1 (dehydrin DHN3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 167.2 bits (422), Expect = 9.1e-38 Identity = 90/142 (63.38%), Postives = 99/142 (69.72%), Query Frame = 0
BLAST of Tan0017569 vs. NCBI nr
Match: KAG6577230.1 (hypothetical protein SDJN03_24804, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162.2 bits (409), Expect = 2.9e-36 Identity = 88/136 (64.71%), Postives = 97/136 (71.32%), Query Frame = 0
BLAST of Tan0017569 vs. NCBI nr
Match: XP_022929430.1 (dehydrin DHN1-like [Cucurbita moschata]) HSP 1 Score: 161.8 bits (408), Expect = 3.8e-36 Identity = 88/137 (64.23%), Postives = 97/137 (70.80%), Query Frame = 0
BLAST of Tan0017569 vs. NCBI nr
Match: KAG7015320.1 (hypothetical protein SDJN02_22955, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 161.4 bits (407), Expect = 5.0e-36 Identity = 88/135 (65.19%), Postives = 96/135 (71.11%), Query Frame = 0
BLAST of Tan0017569 vs. NCBI nr
Match: XP_038888416.1 (dehydrin Xero 1-like [Benincasa hispida]) HSP 1 Score: 153.7 bits (387), Expect = 1.0e-33 Identity = 82/122 (67.21%), Postives = 90/122 (73.77%), Query Frame = 0
BLAST of Tan0017569 vs. ExPASy TrEMBL
Match: A0A6J1EUD8 (dehydrin DHN1-like OS=Cucurbita moschata OX=3662 GN=LOC111436004 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36 Identity = 88/137 (64.23%), Postives = 97/137 (70.80%), Query Frame = 0
BLAST of Tan0017569 vs. ExPASy TrEMBL
Match: A0A6J1C5G3 (dehydrin Xero 1-like OS=Momordica charantia OX=3673 GN=LOC111008435 PE=3 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.6e-32 Identity = 92/182 (50.55%), Postives = 100/182 (54.95%), Query Frame = 0
BLAST of Tan0017569 vs. ExPASy TrEMBL
Match: A0A6J1C526 (dehydrin DHN1-like OS=Momordica charantia OX=3673 GN=LOC111008439 PE=3 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.4e-31 Identity = 81/128 (63.28%), Postives = 90/128 (70.31%), Query Frame = 0
BLAST of Tan0017569 vs. ExPASy TrEMBL
Match: A0A5D3CYN8 (Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005140 PE=3 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 9.2e-28 Identity = 89/182 (48.90%), Postives = 95/182 (52.20%), Query Frame = 0
BLAST of Tan0017569 vs. ExPASy TrEMBL
Match: A0A1S3BTX2 (dehydrin DHN1 OS=Cucumis melo OX=3656 GN=LOC103493214 PE=3 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 9.2e-28 Identity = 89/182 (48.90%), Postives = 95/182 (52.20%), Query Frame = 0
BLAST of Tan0017569 vs. TAIR 10
Match: AT3G50980.1 (dehydrin xero 1 ) HSP 1 Score: 59.7 bits (143), Expect = 1.9e-09 Identity = 55/136 (40.44%), Postives = 61/136 (44.85%), Query Frame = 0
BLAST of Tan0017569 vs. TAIR 10
Match: AT5G66400.1 (Dehydrin family protein ) HSP 1 Score: 50.8 bits (120), Expect = 8.8e-07 Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of Tan0017569 vs. TAIR 10
Match: AT5G66400.2 (Dehydrin family protein ) HSP 1 Score: 50.8 bits (120), Expect = 8.8e-07 Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of Tan0017569 vs. TAIR 10
Match: AT3G50970.1 (dehydrin family protein ) HSP 1 Score: 46.6 bits (109), Expect = 1.7e-05 Identity = 29/72 (40.28%), Postives = 33/72 (45.83%), Query Frame = 0
BLAST of Tan0017569 vs. TAIR 10
Match: AT2G21490.1 (dehydrin LEA ) HSP 1 Score: 42.0 bits (97), Expect = 4.1e-04 Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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