Tan0017396 (gene) Snake gourd v1

Overview
NameTan0017396
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
LocationLG04: 2506328 .. 2511195 (+)
RNA-Seq ExpressionTan0017396
SyntenyTan0017396
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAAACACAGTAATAAAAGGCTAAACCCTACCATCGAAGTCTTCTTTCTCCCCAGACTTTACAGAAATCAGATCGAGGGAAGAATCTCTCCGTGCATCTTCTCATCTTCCTTCTCTTTCCTTCAGGTAATTAAGCCCTTCCGATTTCTGGTTTCGCTGTTTCGTTTCTCGATGCATAGACGAAGCTTCGCAATATTCTTGAACGAACCCAAACCCACATGAAAGCTATCAATAGTCGTTCATAGCCACTTTCTACTTGTTTCGATCATTCGGAATTAGTTTTTTTTTTTAAAGGTTCATTCTTACTTTGAATTATCTCTTTCCGCTTCTCTCGGTAAAAAAATTGGGGGAAGTGAAGAGAGGAGCCTCTTCGTCTAACCCTTTCGATTCCTTCTTCATTTAGCGGGTGGATTTTCTTGCCTTTTTCTCTTGTGGGTATGTGATCTTCAAGACTTTAATATGTATCTTGTAGCTTAGCTATCTGGAGTATGGGTACGAGCAATTGAGAGGTTTAACAGTCGAACCGGAAATCCTGAGCCTGTGAAGTGTGGTTTAGGGTTTAACAGTTGAAGCTTTTATAAGTTTGACTGTTTAGGATGATGTGTGGGTTTCATTGGATTAACTACCATTCTAATTTTTATCGTTTTTCTATTTTAGCAAGTTTTTGGTTTGAATAGACAAGAAATTTTGACGATATGCATCTTAAGTGTAGACCTCACCTGGTAATTGTTTTGGATAGGTTGAAACATGAGAAGATACAGTCCACCATATCATAGTCCTCCGAGGAGAGGATATGGCGGTCGAGGAAGAAGCCCCCCAGGAAGGGGTTATGGTGGTGGTGGTGGTGGTGGTGGGGGGTATGGAAGACGAAGGGAACAGGCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGTCAGGATTTGACCACGTTTCTTTTTTTTTTTTCAATTACCATATAGCTTTGTCCAATGTAGGTTTCAGTACTGCTAGTTCATGAATTTGTTGTTATCTCTCACTGATTTTTAACAACTTGGCTTCTGGTTATATTGATACTTGCAGGCCAGAAGAGCTTAGAGCTCCATTTGAGAGGTTTGGACTTGTTCGAGATGTGTATATTCCGAAAGATTATTACACAGGGTGAGCATCTGTTGTTTCTTTTTCTTATTTATTTTTCACACTGCTCCACCATGGTATGTGATTGAATTTATTAGCTGTTATTCAATCTGATTCCTGAACGTGTACTTTTACATTCCTTGTGACCGTGAGTTAATTTGATAAGGACACATCTTTGTATGGTTAATATCTGGACTTCTGAGCACCAATTTGCACTAAAAATTAATCAAATTAACCTCAAACTGGGCTCAGGTGGTAATTTTAGGTTTACTGGTTAAGCATCAAGCCAAGCCTTTTGCATTAGAAATTGATTCTGATTACTCACTCTTGTTTGATGCTCTCAGTCATGTGTCATAATTCTAAGCTTCTCATTTAGACCAATAATTGATGTAAGTCAAAATATATCGAGCACGCACAAAGATTTTCTCTTTTGCATTTCAAGATTCTATTTTCAGAACAATGTCTAACTTTCTTTTTCTTCTTTCTGGAAAAAATTCTTATGTGCCTTCATACGCAAGATGAAATAAACTCTCATGCAATTGTCAGGGAACTTTTTTACAAATATTTTTCAACTTCTTTATCCCAAAAAAAAAAATAATAAATAAAAAATTCTGATCAATTCTTGAGGGTGTACGTTTGTGCATTGAGTTCTAAATTTATAGAGGAAAATTTTAGATCTTATGGAAAATCCGGTTGAGTTTGTTATTCATAGTTAGGGAATGCAGAGGATGAAAAATGTCAAACAAAATTTCACCAGACCTTATTTTTTCTGGGTGAATTTTATTCCCATTTCATAGTGTGTTAAATTTTGAACTGCTTTGTCAGGGGGCATATTGGTTTGAACTTTGAAGTTAAAACAAGCCCAAGCCCCTATTAATGAGGGTCTACTACTTTTCACTGCCTAACATATTGCTCATCAAGAATGTAAAGAGTAATATCGAAATGAGGGTCTCTCTCTGAGGAGATATTAGATAATTACCCCATCAATAGAAGTTGATGAGGATGAAGATAGATTCTTGAGATATTGAAGCTAACAAGGTGAAGGTTTTAAGGTTGTGGAATGTTTGTTCAAGTGCTTCATGTGTTTCCAAGTATGTGAAGAATTTTCAAGTCATGAATTGTTGGTTTCAAGTACTTATATCAAGAAATGTGAAGATTTTTCAAGTCAAGTTACGTTGAATCGAAGTGCTTATAGTTACAAGAATATGAAGATTTTTGAAGTCTCTTGCCTCTTTCATGCTTGATTGTAAAGAGAAGGTTAGCTACTGAACTTTGCAATTAGCTGCTTTATGTAACTTCAGCCCCAGCTTTGAAGAAAGCAGTCTGAAGTTAATATTGGATATGAAAAGAAAGCTATTTAGTTTATGGCATCCTGAATCCTTTTAGCCATGAAAAGTATACTAATGTTATCATTCAGTCTAGTTACCCAAGATTTTTTTTCCAGAAGAGTTTCTTACTTTCATAATGAAAATTTTGTTTGAATTCTTTGTAGTGAACCACGAGGATTTGCATTTGTGGAGTTTGTCGATCCTTATGAGGCTTCTGAAGCTCAGTATCATATGAATGGGAAAAAATTTGCGGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCAAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGTGGTTTGTTTGTTCTCTTTTACCTCGTTTTCTCCATGGTTTCAAGACTGTAATTCTCATTATGTTTTAAGCAATCTAAAAATCCTACTCTGTCCATTCAGTGTGTTCAATGGCAAATAGCCTTTTATGATGTTTATTTAGCTACCAGTTACTTGTGTTTTACTATTCTATTTTCCCTTTCTGTAGGGGACCATCTGGCTATGGTGGACGTCGTTCTTATTATGGTATGGGTACTAGTAGTCTATGTTGAAATTCGATGCAATTTTCTCATTTTTCTAGTTCATGTTACTTCTACTTCTTGATTGTGTTCAAGAAGACTATACTCTATAGCATCACTTCTTGTTATGGAACTCTTGGACATTACAGCTTGGAGCAGCTTTCGATGATGCAGTAGTAACTAGCATATGGGATTTATTTCCAATATGTTAGATTGCACGTGTATTATTCTTTGACTTTTCTTGAGACTTAGGATTGGTGTATTGATGTACCTACCTATTCAATCGAGCTTTCTTTGTAAGCTCCAAGTTGTGTTCATATAATATCCTTTAAACGAACCTTTTTTTTTTGTCTAATGAACTAAGGAAAGTTCCTCACATGTCACATACGGATGGATTTTCGTATTTGATTGATCCTTCAAACATTCTTTCCCTAGTTTGATGCTTCTGTTTGGAGATTTTATCGATAACCCTTTCCACATGGCCATCCCTTAGTAGCTTCTTTTATTAGGTTGAAATATAAGCATATAATAATTCTTTTGTTTCTGTTAACCTAATGGTCACTCGTTTGGTATGAATTTGTGAATTTGCAGGCTTGCAGGTTTTGTTAAATGTTAATTGATTGAATTAAAAATACAAACCTCCTCTGTACATTTAAATTGTTCGTTGATATTACAGGTTTCAATTTGGTACTAAATTTCAAGTACACATTCTAAAGTTTGGAATCAAATCAATCATTAACTATTGTACTACACAAAATTAGTCCATATTGGATTATTGTATTCAATGATCAACATGGTTTCAGGATATAATTGATCATGATTTTTTTTGTGACTTTATAGGGCGTTCTAGATCTCGTTCAGTATCCCGATCACGCTCTCCCCATCATCCTTCAGGTTCAAGAAGTAGATATCGATCAAGGTAATCTATTTAAAACAGAAATGTTCATATTTATTTATGCTCTAGGTAGTAAATATGCCAAATGTAATTGTCAGGTCCTACTCTCCTGCTCCAAGATGGCGGGGCGACTATTCTGTATCCCCCAGTAGACGGCATGCAGACTACCCTAGATCACCAAGAGGTGCTCCTCGTGAGCGAGATGGTGAGAGGAGTCAGCAAGTATATTCTCCAGGTTATGATAATGCTGATGGTCATGATCACGATGGAAATGGAAATGGATATCATGAGTAAGTTGAATGATTTACTGATGACTTATTTCTTTTTGAGAGCATCCCGAATTATGCGACTATTTTTAGTGTTTCTCTGTTTCTGTGTTTCTTCATGCATTGCTTATTACATACGCGAGTCTCATGATTGAGAATGTTATCTTTCAGTTTGTTTAACCTTAATTTTATCATCTTTGTTTACTATGCTTGTTTAAAAGTGTGTTTAGTTTTGTTTTATTCATTCGTCAATCCCTTTTCTCTTTTTTTCCCCCTTCTTTAGAAAGTCTGCATTTGAAAGAGAGGATGCACGAGCTAACTGGAGGTCTTCTCCTGGTAGAAGGCCGTCTCCTCCTGGTAGAACATCAAGATCCCCTTCAGGGTCCCGATCCCGCTCTGCCGATCCGTCACCAAGACACGGCAGATGATTTTTCTAACCTTCGGTTCTAATATTTTACGTTTGTTACCCTTAAGTTAGAATCGACTATCCAGTAAAAATTCTAAGATTGTATTTTGTAAGATGGTGTTCTTAGTGTTCGGGTTTTCAAGACATGGGCAATTTTCTTTGCTCTCATTTGCAGTTCAAAATTATTATGGTAGACCATCCAACCTGTTGCTACTTTTCTGGATTGTGCATGCTCTTCTTCTTCTTCATATATCTCATTCACGATATGTTATCGGTATTAAAATTTCTACCTTTCATTTGATGGTGC

mRNA sequence

CGAAACACAGTAATAAAAGGCTAAACCCTACCATCGAAGTCTTCTTTCTCCCCAGACTTTACAGAAATCAGATCGAGGGAAGAATCTCTCCGTGCATCTTCTCATCTTCCTTCTCTTTCCTTCAGGTTGAAACATGAGAAGATACAGTCCACCATATCATAGTCCTCCGAGGAGAGGATATGGCGGTCGAGGAAGAAGCCCCCCAGGAAGGGGTTATGGTGGTGGTGGTGGTGGTGGTGGGGGGTATGGAAGACGAAGGGAACAGGCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAAGAGCTTAGAGCTCCATTTGAGAGGTTTGGACTTGTTCGAGATGTGTATATTCCGAAAGATTATTACACAGGTGAACCACGAGGATTTGCATTTGTGGAGTTTGTCGATCCTTATGAGGCTTCTGAAGCTCAGTATCATATGAATGGGAAAAAATTTGCGGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCAAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGGGACCATCTGGCTATGGTGGACGTCGTTCTTATTATGGGCGTTCTAGATCTCGTTCAGTATCCCGATCACGCTCTCCCCATCATCCTTCAGGTTCAAGAAGTAGATATCGATCAAGGTCCTACTCTCCTGCTCCAAGATGGCGGGGCGACTATTCTGTATCCCCCAGTAGACGGCATGCAGACTACCCTAGATCACCAAGAGGTGCTCCTCGTGAGCGAGATGGTGAGAGGAGTCAGCAAGTATATTCTCCAGGTTATGATAATGCTGATGGTCATGATCACGATGGAAATGGAAATGGATATCATGAAAAGTCTGCATTTGAAAGAGAGGATGCACGAGCTAACTGGAGGTCTTCTCCTGGTAGAAGGCCGTCTCCTCCTGGTAGAACATCAAGATCCCCTTCAGGGTCCCGATCCCGCTCTGCCGATCCGTCACCAAGACACGGCAGATGATTTTTCTAACCTTCGGTTCTAATATTTTACGTTTGTTACCCTTAAGTTAGAATCGACTATCCAGTAAAAATTCTAAGATTGTATTTTGTAAGATGGTGTTCTTAGTGTTCGGGTTTTCAAGACATGGGCAATTTTCTTTGCTCTCATTTGCAGTTCAAAATTATTATGGTAGACCATCCAACCTGTTGCTACTTTTCTGGATTGTGCATGCTCTTCTTCTTCTTCATATATCTCATTCACGATATGTTATCGGTATTAAAATTTCTACCTTTCATTTGATGGTGC

Coding sequence (CDS)

ATGAGAAGATACAGTCCACCATATCATAGTCCTCCGAGGAGAGGATATGGCGGTCGAGGAAGAAGCCCCCCAGGAAGGGGTTATGGTGGTGGTGGTGGTGGTGGTGGGGGGTATGGAAGACGAAGGGAACAGGCTCATGGTAGCCTTTTGGTTAGAAATATTCCTATGGATTGCAGGCCAGAAGAGCTTAGAGCTCCATTTGAGAGGTTTGGACTTGTTCGAGATGTGTATATTCCGAAAGATTATTACACAGGTGAACCACGAGGATTTGCATTTGTGGAGTTTGTCGATCCTTATGAGGCTTCTGAAGCTCAGTATCATATGAATGGGAAAAAATTTGCGGGTAGGGAGATTACTGTGGTCCTTGCTGCAGAGTCAAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGGGACCATCTGGCTATGGTGGACGTCGTTCTTATTATGGGCGTTCTAGATCTCGTTCAGTATCCCGATCACGCTCTCCCCATCATCCTTCAGGTTCAAGAAGTAGATATCGATCAAGGTCCTACTCTCCTGCTCCAAGATGGCGGGGCGACTATTCTGTATCCCCCAGTAGACGGCATGCAGACTACCCTAGATCACCAAGAGGTGCTCCTCGTGAGCGAGATGGTGAGAGGAGTCAGCAAGTATATTCTCCAGGTTATGATAATGCTGATGGTCATGATCACGATGGAAATGGAAATGGATATCATGAAAAGTCTGCATTTGAAAGAGAGGATGCACGAGCTAACTGGAGGTCTTCTCCTGGTAGAAGGCCGTCTCCTCCTGGTAGAACATCAAGATCCCCTTCAGGGTCCCGATCCCGCTCTGCCGATCCGTCACCAAGACACGGCAGATGA

Protein sequence

MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR
Homology
BLAST of Tan0017396 vs. ExPASy Swiss-Prot
Match: Q8L3X8 (Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=3702 GN=SCL30 PE=1 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 7.8e-75
Identity = 182/294 (61.90%), Postives = 203/294 (69.05%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPM 60
           MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG    RR  +HGSLLVRNIP+
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGG----RRGSSHGSLLVRNIPL 60

Query: 61  DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120
           DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFVD Y+A EAQ  MN + FAGR
Sbjct: 61  DCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGR 120

Query: 121 EITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRY 180
           EITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSP  PS SRSRY
Sbjct: 121 EITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRY 180

Query: 181 RSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDN--ADGHDH 240
           RSRSYSPAPR RG                PRG   E D   S++ YSPGY+   A   D 
Sbjct: 181 RSRSYSPAPRRRGG--------------PPRG---EEDENYSRRSYSPGYEGAAAAAPDR 240

Query: 241 DGNG-NGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR 287
           D NG N   EK  +E ED R   R+            SRSPSGSRSRS + SPR
Sbjct: 241 DRNGDNEIREKPGYEAEDRRRGGRA-----------VSRSPSGSRSRSVEVSPR 262

BLAST of Tan0017396 vs. ExPASy Swiss-Prot
Match: Q9SEU4 (Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=3702 GN=SCL33 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.4e-34
Identity = 128/294 (43.54%), Postives = 155/294 (52.72%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  R         G YG R      SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPR---------GRYGGRSRDLPTSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYS 181
            A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS    
Sbjct: 124 FAEENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRS---- 183

Query: 182 PAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYH 241
                 GDY   P RRH  +PRS        DG RS    SP  D + G           
Sbjct: 184 ------GDYYSPPPRRH--HPRSISPREERYDGRRSYS-RSPASDGSRG----------- 243

Query: 242 EKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADP------SPRHGR 290
            +S         +   SP R  S   R SRSPS  R+RS  P      SPR  R
Sbjct: 244 -RSLTPVRGKSRSLSPSPRRSISRSPRRSRSPSPKRNRSVSPRRSISRSPRRSR 253

BLAST of Tan0017396 vs. ExPASy Swiss-Prot
Match: Q9LHP2 (Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX=3702 GN=SCL30A PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.8e-32
Identity = 121/291 (41.58%), Postives = 151/291 (51.89%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  GG         R      SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRFGGS--------RDSDLPTSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A+EA++ M+G    GRE+TVV
Sbjct: 64  DLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY- 181
            A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y 
Sbjct: 124 FAEENRKKPTEMRTRDR------GGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYN 183

Query: 182 SPAPRWRGDYSVSPSRRHADYPRS-----PRGAPRERDGERSQQVYSPGYDNADGHDHDG 241
           SP  +     SVSP  R  +  RS     P    R R G       SPG   +       
Sbjct: 184 SPPAKRHQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSG-------SPGRVKS------- 243

Query: 242 NGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR 287
                H +S       R N      R  +P    S+SP   +SRS  P PR
Sbjct: 244 -----HSRSPRRSVSPRKN------RSYTPEQARSQSPVPRQSRSPTPVPR 251

BLAST of Tan0017396 vs. ExPASy Swiss-Prot
Match: Q1PDV2 (Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=3702 GN=SCL28 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.9e-21
Identity = 90/228 (39.47%), Postives = 115/228 (50.44%), Query Frame = 0

Query: 2   RRYS--PPYHSPP--RRGYGGR--GRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIP 61
           R YS  P   SPP  R+GY        P  R +   G  G             LL+RN+P
Sbjct: 9   RSYSPRPRDRSPPRERKGYDDNRLRERPSSRDHESSGPSG-------------LLIRNLP 68

Query: 62  MDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAG 121
           +D RP +LR  FERFG ++D+Y+P++YYTGEPRGF FV++    +A+EA   MN K   G
Sbjct: 69  LDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGG 128

Query: 122 REITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRY 181
           REI +V A E+RK P++MR       +G  GR   Y R+  RS  R    H    SRSR 
Sbjct: 129 REIAIVFAEENRKTPQEMRT-----TNGTSGRHGDYKRTSHRSPRRRYRSH----SRSRS 188

Query: 182 RSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSP 224
             R  S   + R D   SP RR     RSP   PR     +S+   SP
Sbjct: 189 PPRRESRHSKVREDDLYSPRRRSRSISRSP--LPRNEREYKSRNCRSP 212

BLAST of Tan0017396 vs. ExPASy Swiss-Prot
Match: Q9BRL6 (Serine/arginine-rich splicing factor 8 OS=Homo sapiens OX=9606 GN=SRSF8 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.7e-19
Identity = 98/247 (39.68%), Postives = 123/247 (49.80%), Query Frame = 0

Query: 48  SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 107
           +L V N+     P+ LR  FE++G V DVYIP++ +T  PRGFAFV F D  +A +A+  
Sbjct: 15  TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74

Query: 108 MNGKKFAGREITVVLAAESRKRPEQMRQRSRRGPS---GYGGR-RSYYGRSRS---RSVS 167
           M+G +  GRE+ V +A   R+   + RQ   RG S   GYG R RSY  RSRS   R  S
Sbjct: 75  MDGAELDGRELRVQVARYGRRDLPRSRQGEPRGRSRGGGYGRRSRSYGRRSRSPRRRHRS 134

Query: 168 RSRSPH-HPSGSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQ 227
           RSR P    S SRSRYR   YS +P  R  YS       + Y RSP    R R+      
Sbjct: 135 RSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYS------RSRYSRSPYSRSRYRESRYGGS 194

Query: 228 VY-SPGYDNADGHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRS 286
            Y S GY N+    +  + +  H KS        A+   S   R S     SRS S SRS
Sbjct: 195 HYSSSGYSNSRYSRYHSSRS--HSKSGSSTSSRSASTSKSSSARRSKSSSVSRSRSRSRS 253

BLAST of Tan0017396 vs. NCBI nr
Match: XP_022139086.1 (serine/arginine-rich SC35-like splicing factor SCL30 [Momordica charantia])

HSP 1 Score: 526.2 bits (1354), Expect = 1.8e-145
Identity = 275/289 (95.16%), Postives = 278/289 (96.19%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ+HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQSHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYY+GEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYSGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGY 240
           SPAPRWRGDYSVSPSRRHADYPRSPRGAP ERDGERSQQ YSPGYDNADGHDHD  GNGY
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPHERDGERSQQAYSPGYDNADGHDHD--GNGY 240

Query: 241 HEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR 290
           H+KSAFE  D RANWRSSPGRR S PGR SRSPSGSRSRSAD SPRHGR
Sbjct: 241 HDKSAFEGGDVRANWRSSPGRR-SSPGRISRSPSGSRSRSADASPRHGR 286

BLAST of Tan0017396 vs. NCBI nr
Match: XP_008461655.1 (PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461656.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >XP_008461657.1 PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo])

HSP 1 Score: 504.6 bits (1298), Expect = 5.7e-139
Identity = 266/289 (92.04%), Postives = 270/289 (93.43%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGY 240
           SPAPRWRGDYSVSP RRHADYP SPRGAPRERD ERS+QVYSPGYDNAD  +HD NGNGY
Sbjct: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNAD--EHDQNGNGY 240

Query: 241 HEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR 290
           H+KS FE EDAR NWRSS       PGRTSRSPSGSRSRSAD SPRHGR
Sbjct: 241 HDKSGFEGEDARGNWRSS-------PGRTSRSPSGSRSRSADASPRHGR 280

BLAST of Tan0017396 vs. NCBI nr
Match: XP_023549438.1 (serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita pepo subsp. pepo] >XP_023549446.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500.7 bits (1288), Expect = 8.2e-138
Identity = 266/291 (91.41%), Postives = 270/291 (92.78%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI V
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY 180

Query: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHD--GNGN 240
           SPAPRWRGDYSVSPSRRHADYPRSPRGA RERDGERS+QVYSPGYDNADG D D  GNGN
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGN 240

Query: 241 GYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR 290
           GYH+K AFE EDARANWR S       P RTSRSPSGSRSRSAD SPRHGR
Sbjct: 241 GYHDKPAFEGEDARANWRPS-------PDRTSRSPSGSRSRSADASPRHGR 284

BLAST of Tan0017396 vs. NCBI nr
Match: XP_022987464.1 (serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima] >XP_022987470.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima])

HSP 1 Score: 500.4 bits (1287), Expect = 1.1e-137
Identity = 266/292 (91.10%), Postives = 270/292 (92.47%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQAHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQ HGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRS 180
           I VVLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RS
Sbjct: 121 IAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRS 180

Query: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNG 240
           RSYSPAPRWRGDYSVSPSRRHADYPRSPRGA RERDGERS+QVYSPGYDNADG D DGNG
Sbjct: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNG 240

Query: 241 NGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR 290
           NGYH+K AFE EDARANWR S       P RTSRSPSGSRSRSAD SPRHGR
Sbjct: 241 NGYHDKPAFEGEDARANWRPS-------PDRTSRSPSGSRSRSADASPRHGR 285

BLAST of Tan0017396 vs. NCBI nr
Match: KAG7030730.1 (Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499.2 bits (1284), Expect = 2.4e-137
Identity = 266/292 (91.10%), Postives = 273/292 (93.49%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQAHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQ+HGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQSHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGDPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRS 180
           ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPH PSGS SRYRS
Sbjct: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHRPSGS-SRYRS 180

Query: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNG 240
           RSYSPAPRWRG+YS+SP RRHADYPRSPRGAPRERDGERS QVYSPGYDNA GHDHD  G
Sbjct: 181 RSYSPAPRWRGNYSLSPDRRHADYPRSPRGAPRERDGERSHQVYSPGYDNAGGHDHD--G 240

Query: 241 NGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR 290
           NGYH+K+AFE EDARA+WRSS       PGRTSRSPSGSRSRSAD SPRHGR
Sbjct: 241 NGYHDKTAFEGEDARADWRSS-------PGRTSRSPSGSRSRSADASPRHGR 282

BLAST of Tan0017396 vs. ExPASy TrEMBL
Match: A0A6J1CBL6 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Momordica charantia OX=3673 GN=LOC111010084 PE=4 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 8.8e-146
Identity = 275/289 (95.16%), Postives = 278/289 (96.19%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ+HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQSHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYY+GEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYSGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGY 240
           SPAPRWRGDYSVSPSRRHADYPRSPRGAP ERDGERSQQ YSPGYDNADGHDHD  GNGY
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPHERDGERSQQAYSPGYDNADGHDHD--GNGY 240

Query: 241 HEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR 290
           H+KSAFE  D RANWRSSPGRR S PGR SRSPSGSRSRSAD SPRHGR
Sbjct: 241 HDKSAFEGGDVRANWRSSPGRR-SSPGRISRSPSGSRSRSADASPRHGR 286

BLAST of Tan0017396 vs. ExPASy TrEMBL
Match: A0A1S3CFP8 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucumis melo OX=3656 GN=LOC103500205 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.7e-139
Identity = 266/289 (92.04%), Postives = 270/289 (93.43%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQ HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRS+YGRSRSRSVSRSRSP HPSGSRSRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSHYGRSRSRSVSRSRSPRHPSGSRSRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGY 240
           SPAPRWRGDYSVSP RRHADYP SPRGAPRERD ERS+QVYSPGYDNAD  +HD NGNGY
Sbjct: 181 SPAPRWRGDYSVSPGRRHADYPESPRGAPRERDVERSRQVYSPGYDNAD--EHDQNGNGY 240

Query: 241 HEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR 290
           H+KS FE EDAR NWRSS       PGRTSRSPSGSRSRSAD SPRHGR
Sbjct: 241 HDKSGFEGEDARGNWRSS-------PGRTSRSPSGSRSRSADASPRHGR 280

BLAST of Tan0017396 vs. ExPASy TrEMBL
Match: A0A6J1JIZ1 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita maxima OX=3661 GN=LOC111485002 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.2e-138
Identity = 266/292 (91.10%), Postives = 270/292 (92.47%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGGGGYGRRREQAHGSLLVRNIPMD 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGGGGYGRRREQ HGSLLVRNIPMD
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGYGRRREQPHGSLLVRNIPMD 60

Query: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120
           CRPEELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGRE
Sbjct: 61  CRPEELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGRE 120

Query: 121 ITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRS 180
           I VVLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RS
Sbjct: 121 IAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRS 180

Query: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNG 240
           RSYSPAPRWRGDYSVSPSRRHADYPRSPRGA RERDGERS+QVYSPGYDNADG D DGNG
Sbjct: 181 RSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNG 240

Query: 241 NGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR 290
           NGYH+K AFE EDARANWR S       P RTSRSPSGSRSRSAD SPRHGR
Sbjct: 241 NGYHDKPAFEGEDARANWRPS-------PDRTSRSPSGSRSRSADASPRHGR 285

BLAST of Tan0017396 vs. ExPASy TrEMBL
Match: A0A6J1H0N2 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=3662 GN=LOC111458935 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 5.7e-137
Identity = 263/289 (91.00%), Postives = 268/289 (92.73%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY  GGGGGGGYGRRREQ HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY--GGGGGGGYGRRREQPHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI V
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP HPSGSRSR+RSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY 180

Query: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGY 240
           SPAPRWRGDYSVSPSRRHADYPRSPRGA RERDGER++QVYSPGYDNADG D DGNGNGY
Sbjct: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERNRQVYSPGYDNADGPDVDGNGNGY 240

Query: 241 HEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR 290
           H+K AFE EDARANWR S       P RTSRSPSGSRSRSAD SPRHGR
Sbjct: 241 HDKPAFEGEDARANWRPS-------PDRTSRSPSGSRSRSADASPRHGR 280

BLAST of Tan0017396 vs. ExPASy TrEMBL
Match: A0A6J1FWZ5 (serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=3662 GN=LOC111447732 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 8.3e-136
Identity = 262/289 (90.66%), Postives = 269/289 (93.08%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRP 60
           MRRYSPPYHSPPRRGYGGRGRSPPGRGY   GGGGGGYGR+REQ+HGSLLVRNIPMDCRP
Sbjct: 1   MRRYSPPYHSPPRRGYGGRGRSPPGRGY---GGGGGGYGRQREQSHGSLLVRNIPMDCRP 60

Query: 61  EELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120
           EELRAPFERFGLVRDVYIPKDYYTG+PRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV
Sbjct: 61  EELRAPFERFGLVRDVYIPKDYYTGDPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITV 120

Query: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY 180
           VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPH PSGS SRYRSRSY
Sbjct: 121 VLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHRPSGS-SRYRSRSY 180

Query: 181 SPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGY 240
           SPAPRWRG+YS+SP RRHADYPRSPRGAPRERDGERS QVYSPGYDNA GHDHD  GNGY
Sbjct: 181 SPAPRWRGNYSLSPDRRHADYPRSPRGAPRERDGERSHQVYSPGYDNAGGHDHD--GNGY 240

Query: 241 HEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPRHGR 290
           H+K AFE EDARA+WRSS       PGRTSRSPSGSRSRSAD SPRHGR
Sbjct: 241 HDKPAFEGEDARADWRSS-------PGRTSRSPSGSRSRSADASPRHGR 276

BLAST of Tan0017396 vs. TAIR 10
Match: AT3G55460.1 (SC35-like splicing factor 30 )

HSP 1 Score: 282.0 bits (720), Expect = 5.6e-76
Identity = 182/294 (61.90%), Postives = 203/294 (69.05%), Query Frame = 0

Query: 1   MRRYSPPYHSPPRRGYGGRGRS----PPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPM 60
           MRRYSPPY+SPPRRGYGGRGRS    PP RGYGGGGGGGG    RR  +HGSLLVRNIP+
Sbjct: 1   MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGG----RRGSSHGSLLVRNIPL 60

Query: 61  DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120
           DCRPEELR PFERFG VRDVYIP+DYY+G+PRGFAFVEFVD Y+A EAQ  MN + FAGR
Sbjct: 61  DCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGR 120

Query: 121 EITVVLAAESRKRPEQMRQRSR-RGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRY 180
           EITVV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSP  PS SRSRY
Sbjct: 121 EITVVVASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRY 180

Query: 181 RSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDN--ADGHDH 240
           RSRSYSPAPR RG                PRG   E D   S++ YSPGY+   A   D 
Sbjct: 181 RSRSYSPAPRRRGG--------------PPRG---EEDENYSRRSYSPGYEGAAAAAPDR 240

Query: 241 DGNG-NGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR 287
           D NG N   EK  +E ED R   R+            SRSPSGSRSRS + SPR
Sbjct: 241 DRNGDNEIREKPGYEAEDRRRGGRA-----------VSRSPSGSRSRSVEVSPR 262

BLAST of Tan0017396 vs. TAIR 10
Match: AT1G55310.2 (SC35-like splicing factor 33 )

HSP 1 Score: 149.4 bits (376), Expect = 4.3e-36
Identity = 106/220 (48.18%), Postives = 132/220 (60.00%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  R         G YG R      SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPR---------GRYGGRSRDLPTSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRS-Y 181
            A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   Y
Sbjct: 124 FAEENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRSGDYY 183

Query: 182 SPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQV 221
           SP PR     S+SP     D  RS   +P   DG R + +
Sbjct: 184 SPPPRRHHPRSISPREERYDGRRSYSRSPAS-DGSRGRSL 203

BLAST of Tan0017396 vs. TAIR 10
Match: AT1G55310.1 (SC35-like splicing factor 33 )

HSP 1 Score: 148.3 bits (373), Expect = 9.6e-36
Identity = 128/294 (43.54%), Postives = 155/294 (52.72%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  R         G YG R      SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPR---------GRYGGRSRDLPTSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR  FE+FG V+D+Y+P+DYYTG+PRGF FV+F+DP +A++A++HM+G    GRE+TVV
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSYS 181
            A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS    
Sbjct: 124 FAEENRKKPTEMRARERG-----GGRFRDRRRTPPRYYSRSRSP-PPRRGRSRSRS---- 183

Query: 182 PAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNADGHDHDGNGNGYH 241
                 GDY   P RRH  +PRS        DG RS    SP  D + G           
Sbjct: 184 ------GDYYSPPPRRH--HPRSISPREERYDGRRSYS-RSPASDGSRG----------- 243

Query: 242 EKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADP------SPRHGR 290
            +S         +   SP R  S   R SRSPS  R+RS  P      SPR  R
Sbjct: 244 -RSLTPVRGKSRSLSPSPRRSISRSPRRSRSPSPKRNRSVSPRRSISRSPRRSR 253

BLAST of Tan0017396 vs. TAIR 10
Match: AT1G55310.3 (SC35-like splicing factor 33 )

HSP 1 Score: 143.7 bits (361), Expect = 2.4e-34
Identity = 129/306 (42.16%), Postives = 157/306 (51.31%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  R         G YG R      SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPR---------GRYGGRSRDLPTSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTG------------EPRGFAFVEFVDPYEASEAQYHMN 121
           +LR  FE+FG V+D+Y+P+DYYTG            +PRGF FV+F+DP +A++A++HM+
Sbjct: 64  DLRKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMD 123

Query: 122 GKKFAGREITVVLAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPS 181
           G    GRE+TVV A E+RK+P +MR R R G S +  RR    R+  R  SRSRSP  P 
Sbjct: 124 GYLLLGRELTVVFAEENRKKPTEMRARERGGGSRFRDRR----RTPPRYYSRSRSP-PPR 183

Query: 182 GSRSRYRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAPRERDGERSQQVYSPGYDNAD 241
             RSR RS          GDY   P RRH  +PRS        DG RS    SP  D + 
Sbjct: 184 RGRSRSRS----------GDYYSPPPRRH--HPRSISPREERYDGRRSYS-RSPASDGSR 243

Query: 242 GHDHDGNGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADP------ 290
           G            +S         +   SP R  S   R SRSPS  R+RS  P      
Sbjct: 244 G------------RSLTPVRGKSRSLSPSPRRSISRSPRRSRSPSPKRNRSVSPRRSISR 266

BLAST of Tan0017396 vs. TAIR 10
Match: AT3G13570.1 (SC35-like splicing factor 30A )

HSP 1 Score: 139.8 bits (351), Expect = 3.4e-33
Identity = 121/291 (41.58%), Postives = 151/291 (51.89%), Query Frame = 0

Query: 2   RRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGYGRRREQAHGSLLVRNIPMDCRPE 61
           R Y+P   SPP RGYG RGRSP  RG  GG         R      SLLVRN+  DCR E
Sbjct: 4   RSYTP---SPP-RGYGRRGRSPSPRGRFGGS--------RDSDLPTSLLVRNLRHDCRQE 63

Query: 62  ELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGREITVV 121
           +LR PFE+FG V+D+Y+P+DYYTG+PRGF F++F+DP +A+EA++ M+G    GRE+TVV
Sbjct: 64  DLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVV 123

Query: 122 LAAESRKRPEQMRQRSRRGPSGYGGRRSYYGRSRSRSVSRSRSPHHPSGSRSRYRSRSY- 181
            A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y 
Sbjct: 124 FAEENRKKPTEMRTRDR------GGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYN 183

Query: 182 SPAPRWRGDYSVSPSRRHADYPRS-----PRGAPRERDGERSQQVYSPGYDNADGHDHDG 241
           SP  +     SVSP  R  +  RS     P    R R G       SPG   +       
Sbjct: 184 SPPAKRHQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSG-------SPGRVKS------- 243

Query: 242 NGNGYHEKSAFEREDARANWRSSPGRRPSPPGRTSRSPSGSRSRSADPSPR 287
                H +S       R N      R  +P    S+SP   +SRS  P PR
Sbjct: 244 -----HSRSPRRSVSPRKN------RSYTPEQARSQSPVPRQSRSPTPVPR 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8L3X87.8e-7561.90Serine/arginine-rich SC35-like splicing factor SCL30 OS=Arabidopsis thaliana OX=... [more]
Q9SEU41.4e-3443.54Serine/arginine-rich SC35-like splicing factor SCL33 OS=Arabidopsis thaliana OX=... [more]
Q9LHP24.8e-3241.58Serine/arginine-rich SC35-like splicing factor SCL30A OS=Arabidopsis thaliana OX... [more]
Q1PDV22.9e-2139.47Serine/arginine-rich SC35-like splicing factor SCL28 OS=Arabidopsis thaliana OX=... [more]
Q9BRL64.7e-1939.68Serine/arginine-rich splicing factor 8 OS=Homo sapiens OX=9606 GN=SRSF8 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
XP_022139086.11.8e-14595.16serine/arginine-rich SC35-like splicing factor SCL30 [Momordica charantia][more]
XP_008461655.15.7e-13992.04PREDICTED: serine/arginine-rich SC35-like splicing factor SCL30 [Cucumis melo] >... [more]
XP_023549438.18.2e-13891.41serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita pepo subsp. pepo... [more]
XP_022987464.11.1e-13791.10serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima] >XP_0229... [more]
KAG7030730.12.4e-13791.10Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyros... [more]
Match NameE-valueIdentityDescription
A0A6J1CBL68.8e-14695.16serine/arginine-rich SC35-like splicing factor SCL30 OS=Momordica charantia OX=3... [more]
A0A1S3CFP82.7e-13992.04serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucumis melo OX=3656 GN=... [more]
A0A6J1JIZ15.2e-13891.10serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita maxima OX=3661... [more]
A0A6J1H0N25.7e-13791.00serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=36... [more]
A0A6J1FWZ58.3e-13690.66serine/arginine-rich SC35-like splicing factor SCL30 OS=Cucurbita moschata OX=36... [more]
Match NameE-valueIdentityDescription
AT3G55460.15.6e-7661.90SC35-like splicing factor 30 [more]
AT1G55310.24.3e-3648.18SC35-like splicing factor 33 [more]
AT1G55310.19.6e-3643.54SC35-like splicing factor 33 [more]
AT1G55310.32.4e-3442.16SC35-like splicing factor 33 [more]
AT3G13570.13.4e-3341.58SC35-like splicing factor 30A [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 48..121
e-value: 1.7E-21
score: 87.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 49..119
e-value: 2.1E-19
score: 69.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 47..125
score: 17.932785
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 40..191
e-value: 5.6E-27
score: 96.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..281
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 22..285
NoneNo IPR availablePANTHERPTHR23147:SF96OS02G0252100 PROTEINcoord: 22..285
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 46..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0017396.1Tan0017396.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding