Tan0017266 (gene) Snake gourd v1

Overview


Name	Tan0017266
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	vacuolar protein sorting-associated protein 55 homolog
Location	LG01: 24651346 .. 24653521 (-)
RNA-Seq Expression	Tan0017266
Synteny	Tan0017266

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACTTACCACGTTCTTTGCAAGCCTGCTTGAGTATGGGGAAGGTGGCATTCTTAGCAATTTTGGTTTCTGGAGGAATAGTAATGCAAATATTGGTGAGTAGAATTATCTTTGGCAACTTTTGAGCAATATCTTCATGATTCTTGGTTTTGGAAGTCATTTTTTTGTTCTCATTTATCATGTGCTATGACAGGCATGCGCCTTGTACAATAATTGGTGGCCGATGCTAAGTGGTATATAACTAAAATTTCTCCTGGACCCTCTTTTAGTGCTTTTTCCAACATGAAGTTTCTCTATCTCTGCAGCTAAGGCCACGTTTTATAACTATTTTGTTTTTGGTTTTCTTTTTTTAAAATTAAGCTTATAAACACTACTTTCATCCATAGTTTTCTTGCTTTATCACCTTATTTTTCAAAAACATTTTTGAAAACCTAGCCAAATATTGAAAACTAAAAAAGAAAAAGTAGTTTTTAAAAAAACTTGATTTCACTTTTGAAATTTGGTTTAGAATTCCAAAGTGTTTTTAAGGATGGTGAAAAGTTTACCCAAAAAATGGTGAGGAAACAGAAAACCAAAAACAAAATGGCTACCAAAAGGGCCTAAGTTTTTTTATTTCGTATCTTATTAGCTGGACTTGTTGCACTATTTTTTTTTCTGCCAGCACTGTGAGTGTATGTTTTTCATCCACTTAACTTCTGTTTATATGCAGAATCTTTTAATAATGAGTTTTTAGTTCCTTTGACTAAATTACATGCCTAGATAGAAGTGCTTCTCATCTCCATTATGCTCCACTTGAAACTTTCTTTCTAGGTTTTTACTGTACATGACTCGCATAATGAAAGAGTAAGGGTTTTGAATTGTCTTATACAACCAACCCCTCATCCAGAGAGGCTGATTGAAGGGTTGAGCGATAACCAAAGGATAATTTATTTTATTTCCCTTCTCTCTTTTATCACAGATTGATTTCCATTTTTTTCTACTAAAACTTTGGCATCAGTTCAATATATTCTGAGACTAAATAAAAGTTACAATCAAAATTATCATACCATTTGATTGCTTGCTTGTCACCACAATTTTTATAGTGATTGTATCGATGGTGTCAGAATTCATTTTTGAGCAACCGTATGATGCATTTGCATCTCTAAATTTTGAGCCACCCTCTTCACTGTAAGAGGTCTTTTATTATATGATGAGGTTTACATGGTCGAGTTTTTTGTCTGCATTTGATTATGGGACATATCAATAATTTTAATGAAGCCTGCAGAGCTTGTAGCTATTTATGTAGTGTATAATACAAAGTGGCCTTAGAATCTGACATCCCCTTATTCTCACCGGCTGATACTGGTTTCTTTCTTCAGTACAAATGTAGATTTATCTTTTTGTTTGAGGGAGAATAAAGTGAAAAGAAAAAATTATCATGTTTCAATTCAAAAGCTCAAGTGGTGTATGTAAATGGATGTTGTGTGTATATATATTATGTTTATTTTTCTTCATTATGCTGATTTGGATTATATTATCTAGGACCGAAGATATATATTTTTCTTGACTAATTTCATGGCACTATTCTTTGCAGTGATAATGTATGTGCTTCTCCCTATGCCTTTATTATTCTTTGCCGGGGTCAGATAGTTCTTCACTGTATACTGAATCTAACGATAGGTTTGACTTTTGCCTCTGTAACCCATTTGATAAGTGTTTTTAATCAGTTGGCAACACTTTTAAGATATTAAGGGTCTGTTTGAGGTACATGTTATAATAACCTATGTAATACTCTACACCCCAAACATAAACTATTATAATTCGGACTAAATAACTCTGCATCCTAAACATAGATTATATAACTCCATAGACTATTATAACTTATGTTATTATAATGCACTTGCAAACAACCTCTAAAAGATTATCCAAAACAAACTTTTGTATTCATAAAATTCACGTACTCTTTCCCTTCTCCCCACATGTCATTATCATTGAGACAGCTGGATCAATGCAACGAAATTCTTGACTGGAGCTTCGACTATAGGAAGCATTGCCATCCCCATCATCCTGAAGCATGCCGGGATCATCGGCTGGGGGGCACTGGCAATGGACCTCTCGTCATTTGTAGTATTCGTGATTGCCATTTTGTGTTTCTTGTGGATGAACGAAGACGATGACTACACCATGTTCTGA

mRNA sequence

ATGGCAGACTTACCACGTTCTTTGCAAGCCTGCTTGAGTATGGGGAAGGTGGCATTCTTAGCAATTTTGGTTTCTGGAGGAATAGTAATGCAAATATTGGCATGCGCCTTGTACAATAATTGGTGGCCGATGCTAAGTGTGATAATGTATGTGCTTCTCCCTATGCCTTTATTATTCTTTGCCGGGGTCAGATACTGGATCAATGCAACGAAATTCTTGACTGGAGCTTCGACTATAGGAAGCATTGCCATCCCCATCATCCTGAAGCATGCCGGGATCATCGGCTGGGGGGCACTGGCAATGGACCTCTCGTCATTTGTAGTATTCGTGATTGCCATTTTGTGTTTCTTGTGGATGAACGAAGACGATGACTACACCATGTTCTGA

Coding sequence (CDS)

ATGGCAGACTTACCACGTTCTTTGCAAGCCTGCTTGAGTATGGGGAAGGTGGCATTCTTAGCAATTTTGGTTTCTGGAGGAATAGTAATGCAAATATTGGCATGCGCCTTGTACAATAATTGGTGGCCGATGCTAAGTGTGATAATGTATGTGCTTCTCCCTATGCCTTTATTATTCTTTGCCGGGGTCAGATACTGGATCAATGCAACGAAATTCTTGACTGGAGCTTCGACTATAGGAAGCATTGCCATCCCCATCATCCTGAAGCATGCCGGGATCATCGGCTGGGGGGCACTGGCAATGGACCTCTCGTCATTTGTAGTATTCGTGATTGCCATTTTGTGTTTCTTGTGGATGAACGAAGACGATGACTACACCATGTTCTGA

Protein sequence

MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGVRYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFVIAILCFLWMNEDDDYTMF

Homology

[Close]

BLAST of Tan0017266 vs. ExPASy Swiss-Prot
Match: Q9AST6 (Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana OX=3702 GN=At1g32410 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.7e-43
Identity = 91/134 (67.91%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
            G             WINA KFLTGAS +GS+AIP ILKHAG+IGWGALA+DLSS+VVF+
Sbjct: 61  GGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFL 120

Query: 121 IAILCFLWMNEDDD 125
           +AIL ++ + +  D
Sbjct: 121 VAILGYICIGDASD 134

[Close]

BLAST of Tan0017266 vs. ExPASy Swiss-Prot
Match: Q18319 (Vacuolar protein sorting-associated protein 55 homolog OS=Caenorhabditis elegans OX=6239 GN=C30B5.2 PE=3 SV=3)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07
Identity = 41/123 (33.33%), Postives = 58/123 (47.15%), Query Frame = 0


Query: 14  MGKVAFLAILVSGGIV---MQILACAL--YNNWWPMLSVIMYVLLPMPLLF-------FA 73
           MG V  +A L   G+V     +L CAL  Y  W PM  +  YVL P+PLL          
Sbjct: 1   MGGVRAVAALAFAGVVGLTFLVLGCALPRYGTWTPMFVITFYVLSPVPLLIARRFQEDMT 60

Query: 74  GVRYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFVIAILCFLWMNE 125
           G    I    F+T    I + A+PI+L HAG I   A  +  +  V+    I+ + +++ 
Sbjct: 61  GTNACIELALFITTGIVISAFALPIVLAHAGTIANSACFLVNTGSVIMFGTIIAYFYLHR 120

[Close]

BLAST of Tan0017266 vs. ExPASy Swiss-Prot
Match: P47111 (Vacuolar protein sorting-associated protein 55 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VPS55 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.5e-06
Identity = 35/126 (27.78%), Postives = 66/126 (52.38%), Query Frame = 0


Query: 16  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMP-LLFFAGVRYWI------- 75
           K+  L+  ++ G ++ IL+CAL++N++P+  +++++L P+P  +F AG +Y         
Sbjct: 11  KIISLSGFLALGFLLVILSCALFHNYYPLFDILIFLLAPIPNTIFNAGNKYHTSDFMSDS 70

Query: 76  -----NATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFVIAILCFLW---- 124
                +   FLTG      IA+P++  H  +IG  +  M +   ++   +I+ F W    
Sbjct: 71  SNTGQDLAHFLTGMLVTSGIALPVVFYHCQLIGHLSCIMCMIGGLIIYSSIVIFKWFFKK 130

[Close]

BLAST of Tan0017266 vs. ExPASy Swiss-Prot
Match: Q9UUH1 (Vacuolar protein sorting-associated protein 55 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vps55 PE=3 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 33/123 (26.83%), Postives = 63/123 (51.22%), Query Frame = 0


Query: 16  KVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFFAGV-----------R 75
           K+  L+ +++ G ++ IL+CAL+ NW+P+L VI ++L P+P L                R
Sbjct: 6   KIIGLSSVLAVGFMLVILSCALFKNWYPLLIVIPFILAPLPNLLTKKYSTSHDFLQEEDR 65

Query: 76  YWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDL--SSFVVFVIAILCFLWMNED 126
             ++  +F  GA+     A+PI+  + G+IG  A  M     S +  VI +    ++  +
Sbjct: 66  NLLDFGRFTFGATICTGFALPIVFVNVGLIGTAAATMSCVGGSIIFLVITLYSQAFVQHE 125

[Close]

BLAST of Tan0017266 vs. ExPASy Swiss-Prot
Match: O89013 (Leptin receptor gene-related protein OS=Mus musculus OX=10090 GN=Leprot PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.9e-05
Identity = 37/125 (29.60%), Postives = 60/125 (48.00%), Query Frame = 0


Query: 15  GKVAFLAILVSG--GIVMQILACAL--YNNWWPMLSVIMYVLLPMPLLFFAGVRYWINAT 74
           G  A +A+  SG  G+   +L CAL  Y  +WP+  +I YV+ P+P      V Y  +AT
Sbjct: 3   GVKALVALSFSGAIGLTFLMLGCALEDYGVYWPLFVLIFYVISPIPYFIAKRVTYDSDAT 62

Query: 75  K--------FLTGASTIGSIAIPIILKHAGIIGWGALAMDLS-SFVVFVIAILCFLWMNE 127
                    F T    + +  +P++L    +I WGA  + L+ + V+F+     FL    
Sbjct: 63  SSACRELAYFFTTGIVVSAFGLPVVLARVDVIKWGACGLVLAGNAVIFLTIQGFFLVFGR 122

[Close]

BLAST of Tan0017266 vs. NCBI nr
Match: XP_038906097.1 (vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida] >XP_038906098.1 vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 119/138 (86.23%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MADLP SLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADLPGSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
           AG             WINATKFLTGAST+GSIAIPIILKHAGIIGWGA+AMDLSSFVVFV
Sbjct: 61  AGSDSSSLYTDSNNSWINATKFLTGASTVGSIAIPIILKHAGIIGWGAMAMDLSSFVVFV 120

Query: 121 IAILCFLWMNEDDDYTMF 129
           IAILCF+ M+EDDDYTMF
Sbjct: 121 IAILCFMGMSEDDDYTMF 138

[Close]

BLAST of Tan0017266 vs. NCBI nr
Match: XP_022155500.1 (vacuolar protein sorting-associated protein 55 homolog [Momordica charantia] >XP_022155501.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia])

HSP 1 Score: 224.2 bits (570), Expect = 6.6e-55
Identity = 121/139 (87.05%), Postives = 122/139 (87.77%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MADLP SLQAC SMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADLPGSLQACFSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
            G             WINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSF+VFV
Sbjct: 61  GGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFLVFV 120

Query: 121 IAILCFLWMNEDDD-YTMF 129
           IAILCFLWMNEDDD YTMF
Sbjct: 121 IAILCFLWMNEDDDSYTMF 139

[Close]

BLAST of Tan0017266 vs. NCBI nr
Match: XP_022965211.1 (vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima] >XP_022965212.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima] >XP_022965213.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima] >XP_022965214.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima])

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 118/138 (85.51%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MADLP SLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADLPGSLQACLSMGKVAFLAILVSGGIVLQILACALYNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AG----------VRYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
           AG             WINATKFLTGASTIGSIAIPIILKHAGIIGWGA+AMDLSSFVVFV
Sbjct: 61  AGSDSSSLYTDSTDSWINATKFLTGASTIGSIAIPIILKHAGIIGWGAMAMDLSSFVVFV 120

Query: 121 IAILCFLWMNEDDDYTMF 129
           IAILCF+ M+EDD YTMF
Sbjct: 121 IAILCFMGMSEDDGYTMF 138

[Close]

BLAST of Tan0017266 vs. NCBI nr
Match: XP_004150170.1 (vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >XP_031739448.1 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >XP_031739449.1 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >KGN55797.1 hypothetical protein Csa_009853 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 7.2e-54
Identity = 115/138 (83.33%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
           AG             WINATKFLTGAST+GSIAIP+ILKHAGIIGWGA+AMDLSSFVVFV
Sbjct: 61  AGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGIIGWGAMAMDLSSFVVFV 120

Query: 121 IAILCFLWMNEDDDYTMF 129
           +AILCF+ M+EDDDY+MF
Sbjct: 121 VAILCFMGMSEDDDYSMF 138

[Close]

BLAST of Tan0017266 vs. NCBI nr
Match: XP_022923424.1 (vacuolar protein sorting-associated protein 55 homolog [Cucurbita moschata] >XP_022923425.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita moschata] >XP_023553141.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita pepo subsp. pepo] >XP_023553142.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita pepo subsp. pepo] >XP_023553143.1 vacuolar protein sorting-associated protein 55 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.7 bits (561), Expect = 7.2e-54
Identity = 118/138 (85.51%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MADLP SLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADLPGSLQACLSMGKVAFLAILVSGGIVLQILACALYNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AG----------VRYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
           AG             WINATKFLTGASTIGSIAIPIILKHAGIIGWGA+AMDLSSFVVFV
Sbjct: 61  AGSDSSSLYTDSSDSWINATKFLTGASTIGSIAIPIILKHAGIIGWGAMAMDLSSFVVFV 120

Query: 121 IAILCFLWMNEDDDYTMF 129
           IAILCF+ M+EDD YTMF
Sbjct: 121 IAILCFMGMSEDDGYTMF 138

[Close]

BLAST of Tan0017266 vs. ExPASy TrEMBL
Match: A0A6J1DML0 (vacuolar protein sorting-associated protein 55 homolog OS=Momordica charantia OX=3673 GN=LOC111022633 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.2e-55
Identity = 121/139 (87.05%), Postives = 122/139 (87.77%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MADLP SLQAC SMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADLPGSLQACFSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
            G             WINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSF+VFV
Sbjct: 61  GGSDSSSLYTESNDSWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFLVFV 120

Query: 121 IAILCFLWMNEDDD-YTMF 129
           IAILCFLWMNEDDD YTMF
Sbjct: 121 IAILCFLWMNEDDDSYTMF 139

[Close]

BLAST of Tan0017266 vs. ExPASy TrEMBL
Match: A0A6J1HL31 (vacuolar protein sorting-associated protein 55 homolog OS=Cucurbita maxima OX=3661 GN=LOC111465136 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.1e-54
Identity = 118/138 (85.51%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MADLP SLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADLPGSLQACLSMGKVAFLAILVSGGIVLQILACALYNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AG----------VRYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
           AG             WINATKFLTGASTIGSIAIPIILKHAGIIGWGA+AMDLSSFVVFV
Sbjct: 61  AGSDSSSLYTDSTDSWINATKFLTGASTIGSIAIPIILKHAGIIGWGAMAMDLSSFVVFV 120

Query: 121 IAILCFLWMNEDDDYTMF 129
           IAILCF+ M+EDD YTMF
Sbjct: 121 IAILCFMGMSEDDGYTMF 138

[Close]

BLAST of Tan0017266 vs. ExPASy TrEMBL
Match: A0A6J1E6D1 (vacuolar protein sorting-associated protein 55 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431123 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.5e-54
Identity = 118/138 (85.51%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MADLP SLQACLSMGKVAFLAILVSGGIV+QILACALYNNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADLPGSLQACLSMGKVAFLAILVSGGIVLQILACALYNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AG----------VRYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
           AG             WINATKFLTGASTIGSIAIPIILKHAGIIGWGA+AMDLSSFVVFV
Sbjct: 61  AGSDSSSLYTDSSDSWINATKFLTGASTIGSIAIPIILKHAGIIGWGAMAMDLSSFVVFV 120

Query: 121 IAILCFLWMNEDDDYTMF 129
           IAILCF+ M+EDD YTMF
Sbjct: 121 IAILCFMGMSEDDGYTMF 138

[Close]

BLAST of Tan0017266 vs. ExPASy TrEMBL
Match: A0A0A0L5B3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G016420 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.5e-54
Identity = 115/138 (83.33%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADLPASLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
           AG             WINATKFLTGAST+GSIAIP+ILKHAGIIGWGA+AMDLSSFVVFV
Sbjct: 61  AGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGIIGWGAMAMDLSSFVVFV 120

Query: 121 IAILCFLWMNEDDDYTMF 129
           +AILCF+ M+EDDDY+MF
Sbjct: 121 VAILCFMGMSEDDDYSMF 138

[Close]

BLAST of Tan0017266 vs. ExPASy TrEMBL
Match: A0A1S3BJT4 (vacuolar protein sorting-associated protein 55 homolog OS=Cucumis melo OX=3656 GN=LOC103490815 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.6e-54
Identity = 115/138 (83.33%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MADLP SLQACL MGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADLPPSLQACLGMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
           AG             WINATKFLTGAST+GSIAIP+ILKHAGIIGWGA+AMDLSSFVVFV
Sbjct: 61  AGSDSSSLYTDSNDSWINATKFLTGASTVGSIAIPVILKHAGIIGWGAMAMDLSSFVVFV 120

Query: 121 IAILCFLWMNEDDDYTMF 129
           +AILCF+ M+EDDDY+MF
Sbjct: 121 VAILCFMGMSEDDDYSMF 138

[Close]

BLAST of Tan0017266 vs. TAIR 10
Match: AT1G32410.1 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 176.0 bits (445), Expect = 1.9e-44
Identity = 91/134 (67.91%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
            G             WINA KFLTGAS +GS+AIP ILKHAG+IGWGALA+DLSS+VVF+
Sbjct: 61  GGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFL 120

Query: 121 IAILCFLWMNEDDD 125
           +AIL ++ + +  D
Sbjct: 121 VAILGYICIGDASD 134

[Close]

BLAST of Tan0017266 vs. TAIR 10
Match: AT1G32410.2 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 176.0 bits (445), Expect = 1.9e-44
Identity = 91/134 (67.91%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
            G             WINA KFLTGAS +GS+AIP ILKHAG+IGWGALA+DLSS+VVF+
Sbjct: 61  GGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFL 120

Query: 121 IAILCFLWMNEDDD 125
           +AIL ++ + +  D
Sbjct: 121 VAILGYICIGDASD 134

[Close]

BLAST of Tan0017266 vs. TAIR 10
Match: AT1G32410.3 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 176.0 bits (445), Expect = 1.9e-44
Identity = 91/134 (67.91%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
            G             WINA KFLTGAS +GS+AIP ILKHAG+IGWGALA+DLSS+VVF+
Sbjct: 61  GGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFL 120

Query: 121 IAILCFLWMNEDDD 125
           +AIL ++ + +  D
Sbjct: 121 VAILGYICIGDASD 134

[Close]

BLAST of Tan0017266 vs. TAIR 10
Match: AT1G32410.4 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 176.0 bits (445), Expect = 1.9e-44
Identity = 91/134 (67.91%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
            G             WINA KFLTGAS +GS+AIP ILKHAG+IGWGALA+DLSS+VVF+
Sbjct: 61  GGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFL 120

Query: 121 IAILCFLWMNEDDD 125
           +AIL ++ + +  D
Sbjct: 121 VAILGYICIGDASD 134

[Close]

BLAST of Tan0017266 vs. TAIR 10
Match: AT1G32410.5 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 176.0 bits (445), Expect = 1.9e-44
Identity = 91/134 (67.91%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 1   MADLPRSLQACLSMGKVAFLAILVSGGIVMQILACALYNNWWPMLSVIMYVLLPMPLLFF 60
           MAD+P  L+ CL MGK+AFLAILVS GIV+QILACAL+NNWWPMLSVIMYVLLPMPLLFF
Sbjct: 1   MADVPGYLRTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFF 60

Query: 61  AGV----------RYWINATKFLTGASTIGSIAIPIILKHAGIIGWGALAMDLSSFVVFV 120
            G             WINA KFLTGAS +GS+AIP ILKHAG+IGWGALA+DLSS+VVF+
Sbjct: 61  GGSDSTSLFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFL 120

Query: 121 IAILCFLWMNEDDD 125
           +AIL ++ + +  D
Sbjct: 121 VAILGYICIGDASD 134

The following BLAST results are available for this feature:

BLAST of Tan0017266 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AST6	2.7e-43	67.91	Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana O...	[more]
Q18319	1.8e-07	33.33	Vacuolar protein sorting-associated protein 55 homolog OS=Caenorhabditis elegans...	[more]
P47111	4.5e-06	27.78	Vacuolar protein sorting-associated protein 55 OS=Saccharomyces cerevisiae (stra...	[more]
Q9UUH1	2.2e-05	26.83	Vacuolar protein sorting-associated protein 55 OS=Schizosaccharomyces pombe (str...	[more]
O89013	4.9e-05	29.60	Leptin receptor gene-related protein OS=Mus musculus OX=10090 GN=Leprot PE=1 SV=...	[more]

BLAST of Tan0017266 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906097.1	3.8e-55	86.23	vacuolar protein sorting-associated protein 55 homolog [Benincasa hispida] >XP_0...	[more]
XP_022155500.1	6.6e-55	87.05	vacuolar protein sorting-associated protein 55 homolog [Momordica charantia] >XP...	[more]
XP_022965211.1	4.2e-54	85.51	vacuolar protein sorting-associated protein 55 homolog [Cucurbita maxima] >XP_02...	[more]
XP_004150170.1	7.2e-54	83.33	vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus] >XP_031...	[more]
XP_022923424.1	7.2e-54	85.51	vacuolar protein sorting-associated protein 55 homolog [Cucurbita moschata] >XP_...	[more]

BLAST of Tan0017266 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DML0	3.2e-55	87.05	vacuolar protein sorting-associated protein 55 homolog OS=Momordica charantia OX...	[more]
A0A6J1HL31	2.1e-54	85.51	vacuolar protein sorting-associated protein 55 homolog OS=Cucurbita maxima OX=36...	[more]
A0A6J1E6D1	3.5e-54	85.51	vacuolar protein sorting-associated protein 55 homolog OS=Cucurbita moschata OX=...	[more]
A0A0A0L5B3	3.5e-54	83.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G016420 PE=3 SV=1	[more]
A0A1S3BJT4	4.6e-54	83.33	vacuolar protein sorting-associated protein 55 homolog OS=Cucumis melo OX=3656 G...	[more]

BLAST of Tan0017266 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32410.1	1.9e-44	67.91	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.2	1.9e-44	67.91	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.3	1.9e-44	67.91	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.4	1.9e-44	67.91	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.5	1.9e-44	67.91	Vacuolar protein sorting 55 (VPS55) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007262	Vps55/LEPROT	PFAM	PF04133	Vps55	coord: 18..122 e-value: 2.2E-29 score: 101.8
IPR007262	Vps55/LEPROT	PANTHER	PTHR12050	LEPTIN RECEPTOR-RELATED	coord: 1..125
None	No IPR available	PANTHER	PTHR12050:SF1	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG	coord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0017266.1	Tan0017266.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway
biological_process	GO:0006048	UDP-N-acetylglucosamine biosynthetic process
cellular_component	GO:0005768	endosome
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004610	phosphoacetylglucosamine mutase activity