Tan0017248 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTGAATGAAGATTTGGGATTTGGTGAAAATCCATTTGATGGAAGCTTGAATAACAACTCATCTAGAGTGGAGAAAAGACATTCTTCTTCACATGTGATTATGGAAACAAATATGATGATCAGAAGAGAAGGTGATGAAGAAGATGATGATGATCATAATAATATTCCTTCAAATGGTTTCCATAGAGAAATATTATTCCCCAATATGATCACTGGTCAGGCCCCTACCAACAACAATAATTGTAATGTCTTCTCCCCCAACTCCGCCTCGTGCTATAGCAACGACACCGTTTTGGACACCGTCGAAGTTCTCAACGTCCACCGACATCATCATCTCACTGTAATGGCCGAGAGGAAGCTGAGAAGAATGATATCAAATCGGGAATCCGCTCGGAGGTCGCGAATGAGGAAGAAGAAGCAGATTGAAGAGTTACAATACCAGGCAAGATTTTTAAATCCATATCAAAATATCGTCTACAGAAATGTTGAGATCTTAATTTTATGA ATGGAGGTGAATGAAGATTTGGGATTTGGTGAAAATCCATTTGATGGAAGCTTGAATAACAACTCATCTAGAGTGGAGAAAAGACATTCTTCTTCACATGTGATTATGGAAACAAATATGATGATCAGAAGAGAAGGTGATGAAGAAGATGATGATGATCATAATAATATTCCTTCAAATGGTTTCCATAGAGAAATATTATTCCCCAATATGATCACTGGTCAGGCCCCTACCAACAACAATAATTGTAATGTCTTCTCCCCCAACTCCGCCTCGTGCTATAGCAACGACACCGTTTTGGACACCGTCGAAGTTCTCAACGTCCACCGACATCATCATCTCACTGTAATGGCCGAGAGGAAGCTGAGAAGAATGATATCAAATCGGGAATCCGCTCGGAGGTCGCGAATGAGGAAGAAGAAGCAGATTGAAGAGTTACAATACCAGGCAAGATTTTTAAATCCATATCAAAATATCGTCTACAGAAATGTTGAGATCTTAATTTTATGA ATGGAGGTGAATGAAGATTTGGGATTTGGTGAAAATCCATTTGATGGAAGCTTGAATAACAACTCATCTAGAGTGGAGAAAAGACATTCTTCTTCACATGTGATTATGGAAACAAATATGATGATCAGAAGAGAAGGTGATGAAGAAGATGATGATGATCATAATAATATTCCTTCAAATGGTTTCCATAGAGAAATATTATTCCCCAATATGATCACTGGTCAGGCCCCTACCAACAACAATAATTGTAATGTCTTCTCCCCCAACTCCGCCTCGTGCTATAGCAACGACACCGTTTTGGACACCGTCGAAGTTCTCAACGTCCACCGACATCATCATCTCACTGTAATGGCCGAGAGGAAGCTGAGAAGAATGATATCAAATCGGGAATCCGCTCGGAGGTCGCGAATGAGGAAGAAGAAGCAGATTGAAGAGTTACAATACCAGGCAAGATTTTTAAATCCATATCAAAATATCGTCTACAGAAATGTTGAGATCTTAATTTTATGA MEVNEDLGFGENPFDGSLNNNSSRVEKRHSSSHVIMETNMMIRREGDEEDDDDHNNIPSNGFHREILFPNMITGQAPTNNNNCNVFSPNSASCYSNDTVLDTVEVLNVHRHHHLTVMAERKLRRMISNRESARRSRMRKKKQIEELQYQARFLNPYQNIVYRNVEILIL Homology
BLAST of Tan0017248 vs. NCBI nr
Match: XP_038895383.1 (uncharacterized protein LOC120083621 [Benincasa hispida]) HSP 1 Score: 204.9 bits (520), Expect = 5.4e-49 Identity = 113/150 (75.33%), Postives = 124/150 (82.67%), Query Frame = 0
BLAST of Tan0017248 vs. NCBI nr
Match: TYJ98964.1 (light-inducible protein CPRF3-like [Cucumis melo var. makuwa]) HSP 1 Score: 198.0 bits (502), Expect = 6.6e-47 Identity = 120/164 (73.17%), Postives = 131/164 (79.88%), Query Frame = 0
BLAST of Tan0017248 vs. NCBI nr
Match: XP_004137610.2 (transcriptional activator TAF-1 [Cucumis sativus] >KAE8652530.1 hypothetical protein Csa_014039 [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 1.4e-44 Identity = 112/156 (71.79%), Postives = 121/156 (77.56%), Query Frame = 0
BLAST of Tan0017248 vs. NCBI nr
Match: XP_008454802.1 (PREDICTED: light-inducible protein CPRF3-like [Cucumis melo]) HSP 1 Score: 189.1 bits (479), Expect = 3.1e-44 Identity = 115/157 (73.25%), Postives = 126/157 (80.25%), Query Frame = 0
BLAST of Tan0017248 vs. NCBI nr
Match: XP_022137584.1 (bZIP transcription factor 68 [Momordica charantia]) HSP 1 Score: 139.0 bits (349), Expect = 3.7e-29 Identity = 104/175 (59.43%), Postives = 110/175 (62.86%), Query Frame = 0
BLAST of Tan0017248 vs. ExPASy TrEMBL
Match: A0A5D3BIS8 (Light-inducible protein CPRF3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001670 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 3.2e-47 Identity = 120/164 (73.17%), Postives = 131/164 (79.88%), Query Frame = 0
BLAST of Tan0017248 vs. ExPASy TrEMBL
Match: A0A1S3C064 (light-inducible protein CPRF3-like OS=Cucumis melo OX=3656 GN=LOC103495089 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.5e-44 Identity = 115/157 (73.25%), Postives = 126/157 (80.25%), Query Frame = 0
BLAST of Tan0017248 vs. ExPASy TrEMBL
Match: A0A0A0LTK4 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G040010 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.3e-43 Identity = 110/154 (71.43%), Postives = 119/154 (77.27%), Query Frame = 0
BLAST of Tan0017248 vs. ExPASy TrEMBL
Match: A0A6J1C7N0 (bZIP transcription factor 68 OS=Momordica charantia OX=3673 GN=LOC111008998 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29 Identity = 104/175 (59.43%), Postives = 110/175 (62.86%), Query Frame = 0
BLAST of Tan0017248 vs. ExPASy TrEMBL
Match: A0A6J1KFN2 (basic leucine zipper 43-like OS=Cucurbita maxima OX=3661 GN=LOC111495369 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 4.1e-26 Identity = 88/148 (59.46%), Postives = 96/148 (64.86%), Query Frame = 0
BLAST of Tan0017248 vs. TAIR 10
Match: AT3G30530.1 (basic leucine-zipper 42 ) HSP 1 Score: 52.0 bits (123), Expect = 5.5e-07 Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of Tan0017248 vs. TAIR 10
Match: AT5G60830.1 (basic leucine-zipper 70 ) HSP 1 Score: 48.9 bits (115), Expect = 4.6e-06 Identity = 29/43 (67.44%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of Tan0017248 vs. TAIR 10
Match: AT2G04038.1 (basic leucine-zipper 48 ) HSP 1 Score: 47.0 bits (110), Expect = 1.8e-05 Identity = 32/71 (45.07%), Postives = 43/71 (60.56%), Query Frame = 0
BLAST of Tan0017248 vs. TAIR 10
Match: AT5G15830.1 (basic leucine-zipper 3 ) HSP 1 Score: 46.2 bits (108), Expect = 3.0e-05 Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = 0
BLAST of Tan0017248 vs. TAIR 10
Match: AT5G38800.1 (basic leucine-zipper 43 ) HSP 1 Score: 44.3 bits (103), Expect = 1.1e-04 Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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