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Tan0016867 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAAGCATTATGTTCCATTGTTGAATCGCGTTCTGATTGAGAAGATCGTCCCCCTGCTAAAACCAATTTCGACATTTTGCTTCCTGAGAAGTCCAGTAAGGTAAATATTTCCTTCCCTCTCTCAAGCATTTTGATTCCTCCGAAAAAGTTTGTTATTAGGTCGTTTACTGATGGAAACTTATTGGAGAATCAAATTGCGCTTGAAATTTTTCTTTATTTTTATTTTTTTAGCGAGCTTCTAGAAATTTTCTAGATAGGATTCTATCTAGAGTCATTTTCATTGATGGGTGCTTCAATGGAGTCGTTTTTCATTTAATTCTATTTTGTTGTTGTTTCTAGTTTGTTCTTGTTCAATAGTTACTTGGTGTATGCTTTGTTGTGAAGTTGGCTTATAGTTGGGTTTGTGAGCTTTGGTGATTAATATTGGTCACTGTTATCGCCTACATAAAGAAGTCTTGCATTTTGATTTGGAAGTGTGAATATGTAATTAATTTTCATTTTCTCCTTATTTCATTGTTAGTCCATTCAATGATATGATTTATAACCTCTTTTGTTTTCAAATAGTGATTGTAATGCCATTTTGAGACGGAATACTTAACATGGATTAAATTTAGCTGATAAATTATGTGTATGGGTTTGACCGATGCGATTTTCATTATCAACAGAAATCTATATTAGTTTAGTAGTATTTTTCATGGATGAGCTTTGTTGAATAGATAGGATGCCTCATTCCATCAGGCTTTTTGAGATTCAGAATGATGTGGTTGTTTCGTTCATGATAAACATTGTGATTCAAGCTTGTGTTTTATTTAATCTGAAGTCCAAAGGACAAAATTAGCAAAAGTTCTCTTTATAAACTAGCATGTTTAAAGTTGTGGAGACATTCTATTATGCGACATGAAATTGGTGGTTCATTTGTCGGGTGTTGTTTGAATTAAGTTTTGTTGCTCATCTAGCTAAACTATGAAAATGTTATCTTTGTTGGACGTGGGACTCGTGACAAAGAGGAAAACATTATTTTTGTTACTGTAAAGGAAGGTGGCAACCTTCTCCTACCATAATATGGAGGAACTAAAGTCGAGCTTGGAGAAAAGCAGTATGTATAATTGTTCTATTACTTTTGTTATTTATGGTATTTGGACTGTTATTTGCTTAAGAATTTGGTTTTAAATATAACAAGGAAATGAGAAATGCCTTCAAGTGTTGATGGAGCCATTGCACCATATGGTTTAATAGTTACTATGATCTTTATTTTACTTTTTGTTGTTGAACTTGCATTCTACTGAATTAAAGGTTGAATATTTCAATGTTCTTGAAATTTTGTTTAATATGAAGATATTGCTCGTGCAGTGATGAGTTTATGATGTTGACCAGTTTTACCATATTCTTCCTTCTCCTCCAGCAGTTGACTTTGCTTGCTCCGAAGAAAAGGTATACTTTCTTGCATGTTATCTTTCATTTTCTTTTAGTTCCACTGGTGTTGTTTCTTCCCTTGTTAAAATTCAGAGTGCAAGTCCCTACTTTTCTTTTTCTGAAATGCGATTTCTTCATTTAACTTTGTGATTGCTGATTTTGTTATGTAATTCGCATCGTTTTGTAAAATAAATTCAATCTAATGCTTCTGTTAATCGGTTGCCACTTTCTAGGTGGATAAATTTGCTCGTCGTAGGCTGCTTTTTGAAATCATGACTGCATACTAATGCTAACTGAATTTAAGTCTAAAAAAACCAATATGATGCACCTAAATGGTAAGGATTATTAGTAATTTTCATTTTATTTGCATTATTATATTTTAGTTCATTTTCTTTATTTCATTTGGTAGAAAAAAAGTTGTTCAGATCCAACTTCAATCACAAGGATTATGTTATGGACAAAGGCACACAAAAAGAAGAATGGAGAACCAGTGAATTCACAAGTTGTCTAGACACTCGTAAGACTTTTATTTACTGCTTCAGAGGAAAGCTTGGTTATAACTTCTTTTGGATGTCATTATGTTGGGGGGAGGGAGTAGGAAGTTTAGTAGAGTTATCTTCATCACTATGTTGTGTTCTACTGACTTTGCTGTGTGATCTTCTGATTATGAAATAGATAAAGTTTGGATGAAATGACGTTCTGGATATCATTATATGTTGGGGAGGGAGTAAAAAGTTTATGAGAGTTATCTTCGTCCCTCTGTTGTGTTCTATTTGACTTTGTTGTGATCTTCTGGTTATGAAATAGATAAAGTTTAGATGAAAATGACGTTCTGGATATCATTATATGTTGGGGGAGGGAGTAGGAAGTTTAATTAGTAGAGTTATCTTTGTGGTTGTGTTGTGCTCTATTAACTTTGTTGTGAACTTCTAGTTATGAAATAGATAAAATTTGGATGAAAATGACGTTCTAGATATCATTATATGTTGGGGGAGGGAGTAGGAAGTTTAGTAGAGTTATCTTCGTCACTCTGTTATGTTGTATTTGACTTTGTTGTGATTTTCTGGTTATGTTCTTGATGATGCACTATAATAGGTTTAAAAATTTAGATTTCTCTCTTCAATATGATTTGTATTACCTAAATTTTTGTACTTGATGGTAGCAACGTATTGAACAAACTGAAGTTGAGACAATAACTTCCCCAAATAATGTGGTTGATGACGCATTGAGTAAAGTTCTTGGTCCATATCGTGGGCATGTACGAGGATTTGGGTTTGGTGTTACTCGTTCAAAATTAGCTCTCATGTCTCAACGAGATAACAAGTTCACAATGCTTGAAAAAGAATATTTGAGGATGAATGGAGGAAAGGATAG ATGGTGAAGCATTATGTTCCATTGTTGAATCGCGTTCTGATTGAGAAGATCGTCCCCCTGCTAAAACCAATTTCGACATTTTGCTTCCTGAGAAGTCCACTAAACTATGAAAATGTTATCTTTGTTGGACGTGGGACTCGTGACAAAGAGGAAAACATTATTTTTGTTACTGTAAAGGAAGGAACTAAAGTCGAGCTTGGAGAAAAGCAAATATTTGAGGATGAATGGAGGAAAGGATAG ATGGTGAAGCATTATGTTCCATTGTTGAATCGCGTTCTGATTGAGAAGATCGTCCCCCTGCTAAAACCAATTTCGACATTTTGCTTCCTGAGAAGTCCACTAAACTATGAAAATGTTATCTTTGTTGGACGTGGGACTCGTGACAAAGAGGAAAACATTATTTTTGTTACTGTAAAGGAAGGAACTAAAGTCGAGCTTGGAGAAAAGCAAATATTTGAGGATGAATGGAGGAAAGGATAG MVKHYVPLLNRVLIEKIVPLLKPISTFCFLRSPLNYENVIFVGRGTRDKEENIIFVTVKEGTKVELGEKQIFEDEWRKG Homology
BLAST of Tan0016867 vs. ExPASy Swiss-Prot
Match: Q96539 (10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 5.2e-05 Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 0
BLAST of Tan0016867 vs. ExPASy Swiss-Prot
Match: P34893 (10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 6.8e-05 Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 0
BLAST of Tan0016867 vs. NCBI nr
Match: XP_022966634.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 63.9 bits (154), Expect = 7.0e-07 Identity = 47/89 (52.81%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of Tan0016867 vs. NCBI nr
Match: XP_022931931.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita moschata] >XP_023517291.1 10 kDa chaperonin, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6595428.1 10 kDa chaperonin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027431.1 10 kDa chaperonin, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 63.5 bits (153), Expect = 9.1e-07 Identity = 44/84 (52.38%), Postives = 49/84 (58.33%), Query Frame = 0
BLAST of Tan0016867 vs. NCBI nr
Match: XP_022154455.1 (10 kDa chaperonin, mitochondrial-like [Momordica charantia]) HSP 1 Score: 63.5 bits (153), Expect = 9.1e-07 Identity = 45/89 (50.56%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Tan0016867 vs. NCBI nr
Match: XP_038881343.1 (10 kDa chaperonin, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06 Identity = 46/89 (51.69%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Tan0016867 vs. NCBI nr
Match: BBG99597.1 (chaperonin 10 [Prunus dulcis]) HSP 1 Score: 59.3 bits (142), Expect = 1.7e-05 Identity = 41/91 (45.05%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of Tan0016867 vs. ExPASy TrEMBL
Match: A0A6J1HUD0 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111466260 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.4e-07 Identity = 47/89 (52.81%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of Tan0016867 vs. ExPASy TrEMBL
Match: A0A6J1DJN1 (10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111021728 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07 Identity = 45/89 (50.56%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Tan0016867 vs. ExPASy TrEMBL
Match: A0A6J1EUZ7 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111438208 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.4e-07 Identity = 44/84 (52.38%), Postives = 49/84 (58.33%), Query Frame = 0
BLAST of Tan0016867 vs. ExPASy TrEMBL
Match: A0A4Y1R6U7 (Chaperonin 10 OS=Prunus dulcis OX=3755 GN=Prudu_009336 PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 8.3e-06 Identity = 41/91 (45.05%), Postives = 51/91 (56.04%), Query Frame = 0
BLAST of Tan0016867 vs. ExPASy TrEMBL
Match: A0A3S3N2Y9 (Chaperonin, mitochondrial-like protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00835400 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05 Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = 0
BLAST of Tan0016867 vs. TAIR 10
Match: AT1G23100.1 (GroES-like family protein ) HSP 1 Score: 56.6 bits (135), Expect = 1.0e-08 Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Tan0016867 vs. TAIR 10
Match: AT1G14980.1 (chaperonin 10 ) HSP 1 Score: 47.8 bits (112), Expect = 4.8e-06 Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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