Tan0016705 (gene) Snake gourd v1

Overview


Name	Tan0016705
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Nucleic acid-binding, OB-fold containing protein
Location	LG02: 3514536 .. 3516678 (-)
RNA-Seq Expression	Tan0016705
Synteny	Tan0016705

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGCCAACGGTGAACGCCCCAGCAAAGAGGAAGCCTGTGTTCATTAAAGTAGAAGAGCTAAAGCCTGGTACCAGCGGCCATACTCTCACGGTCAAGGTCGTAAGCTCCAAAAATGTGAAGGTTGTCAATAAAGGTGGACGAGCCACCATGAATACGGCTCGCCATCAGCAATTAACTCGTATCTCTGAATGTCTGGTTGGTGATGAGACTGGTTCCATCGTCTTCACAGCTCGAAATGAACAAGGTACGTTTCTCTGCAGCCTTAGAATGTTTGTGGCCCTATTTTTTTTCATCTTGTGGGTGTCTCTGTGCTTGTTGAGGTGATTTTGTGTATGGTTACGAAGAACGTTGGATAAGCGGATGGATATTAGTTTTCTTTTCCTTGGATGCTTTTTTTTTTAGAATTGGGATGAGTTCAATTCTTTTGGAACAGTCAGTGATCTTCTTTTTTGTTTGTGAATTTCATCTCTGTTCCTCGTGAATTAAGTATTCTTCTCTGTAGTAAGGAAAATTGAGATGTTACAATACACTCAATTTAAGGGTATTGTAAAAGGTTACCCATCAAACAAACCTCTGTATAAGAAGTATAGACACTTTAGTTTGGTCATCATGTAGAACACTTGTTAAACTCTGGTTAAGTATATTAAATAGACATTATAATATAGAACAAAAAAAAATAATAAATTTTGAGAGTGAAATACATCACATTCATTTTTTTAATCCTATAAATGTGTACACTTATTGTCTTTGAATTTCCTTCTGGTATACAAATTACATATTTTAAAAATGTAAATTTTACCAATTGTGTCGTTGCCATATGTCCTAAATTTTTAAAAAATGACGTGTCACCTTGTCCAAGTTTGTGTCATATCCCTATGGTTATGTTCTTATATAAATAGAATTTGGACACTGAGATAATTGTATAACAAGGAGTGGCATCAAAGCTAGGTTCCTTTCTAATGGAGGTATCACAATAAAAAAAACTTAAAATTTCTTTTACAAGGTCTGAAATAGAAATGCTTTTTGGGCAGAATGAATTAAATATAAGGAGGGAAGATCATGTGTTTAATTGTTTTTCAACTTCACCGTAAGTTTGCAAAGCACTAGAAGATTTGAAGGGTCTCTTAACAACCTTGATTGAGGGTACAAAGGAAACTACATTGTTGAAAACAGATTACATTGAATTCTTTTAGGGGGAGTGTCTTTAGTTGTAGCTCTAGAAAGGAGTTTATGACAGTTAATGTGTGAGTTTCTTGGTCTGTGAGTTTCTTCTTTATATTTCTTGAGTTAGTCATCCTCTGGGGGGTATGAGGGATGAGATAGAGGTCATTTTTTCTCATCTCCTGTAAATCAGATGCTTTGACATGGTAGATTAAGGTATATGGGTGTAGACATACTTTATGTCTCACCATAAATGTTGCTTTTGACTCGAATCTGTTGTTAATATAATTGCACAGCTGTTTCTTAATCTCTAGCCTTGAACCTGGCGGTTGGTATTTTTGGTCTATGCTTGATATTAAGAACCTATTGCCATACTTTTGTGGGTTATAGTGGAAAGAGGATGAGGAGAACCTGCTGTTACTTAACTGTCATCTTGTGTGTTATCAGTTATGATAGCTTTCAAAGAAATGGTTTCTTGTTTATGGCATAATCTTTATAATTTTGGATCCCAAGTTATATGGTAGTGTATATAATATATCGTAATAGTGAATGCTCTGTTTAGCTGATTTGAATAGCGAATGTACTTCTCTACATTCTTTTGAATGAAATGTATTCTGAAGCTGGTTGGTCATATTTTGTTAAGTATTTAAGACATTACCTGTTGGCTATGCATTGATGTGAGTGATTTCCAATCCTTACTCCTCCCCCACACCAAATGAAAAAAGGGAGGGGAAGATCCAATGTTTGTGGTGTTTTGTTATCTAAACAAATGGTTGTAATTTTTGCAGTTGATATAATGAAGCCTGGAATTACTATGACCCTGCGGAATGCAAAGATTGACATGTTCAAAGGTTCTATGAGGTTAGCAGTAGATAAATGGGGGCGAGTCGAAGTTGCCGAACCAGCTAACTTTGAAGTTAAAGAGGACAACAATCTGTCACTGGTTGAATATGAATTGGTTAATGTTGAAGAGTGA

mRNA sequence

ATGGCGACGCCAACGGTGAACGCCCCAGCAAAGAGGAAGCCTGTGTTCATTAAAGTAGAAGAGCTAAAGCCTGGTACCAGCGGCCATACTCTCACGGTCAAGGTCGTAAGCTCCAAAAATGTGAAGGTTGTCAATAAAGGTGGACGAGCCACCATGAATACGGCTCGCCATCAGCAATTAACTCGTATCTCTGAATGTCTGGTTGGTGATGAGACTGGTTCCATCGTCTTCACAGCTCGAAATGAACAAGTTGATATAATGAAGCCTGGAATTACTATGACCCTGCGGAATGCAAAGATTGACATGTTCAAAGGTTCTATGAGGTTAGCAGTAGATAAATGGGGGCGAGTCGAAGTTGCCGAACCAGCTAACTTTGAAGTTAAAGAGGACAACAATCTGTCACTGGTTGAATATGAATTGGTTAATGTTGAAGAGTGA

Coding sequence (CDS)

ATGGCGACGCCAACGGTGAACGCCCCAGCAAAGAGGAAGCCTGTGTTCATTAAAGTAGAAGAGCTAAAGCCTGGTACCAGCGGCCATACTCTCACGGTCAAGGTCGTAAGCTCCAAAAATGTGAAGGTTGTCAATAAAGGTGGACGAGCCACCATGAATACGGCTCGCCATCAGCAATTAACTCGTATCTCTGAATGTCTGGTTGGTGATGAGACTGGTTCCATCGTCTTCACAGCTCGAAATGAACAAGTTGATATAATGAAGCCTGGAATTACTATGACCCTGCGGAATGCAAAGATTGACATGTTCAAAGGTTCTATGAGGTTAGCAGTAGATAAATGGGGGCGAGTCGAAGTTGCCGAACCAGCTAACTTTGAAGTTAAAGAGGACAACAATCTGTCACTGGTTGAATATGAATTGGTTAATGTTGAAGAGTGA

Protein sequence

MATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQLTRISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

Homology

[Close]

BLAST of Tan0016705 vs. ExPASy Swiss-Prot
Match: O49453 (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.2e-45
Identity = 90/142 (63.38%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 2   ATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQLT 61
           A  T  +  KRKPVF+KVE+LKPGT+GHTLTVKV+ +  V  V +  R   + +R  Q +
Sbjct: 8   AVATGTSTVKRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPS 67

Query: 62  RISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVAE 121
           RI ECL+GDETG I+FTARN+QVD+MKPG T+ LRN++IDMFKG+MRL VDKWGR+E   
Sbjct: 68  RIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATG 127

Query: 122 PANFEVKEDNNLSLVEYELVNV 144
            A+F VKEDNNLSLVEYEL+NV
Sbjct: 128 AASFTVKEDNNLSLVEYELINV 149

[Close]

BLAST of Tan0016705 vs. NCBI nr
Match: XP_038887250.1 (uncharacterized protein At4g28440-like [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 1.0e-67
Identity = 137/145 (94.48%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQL 60
           MATP VNAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGR+TM TAR QQL
Sbjct: 1   MATPAVNAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARN+QVDIMKPG T+TLRNAKIDMFKGSMRLAVDKWGRVEVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPANFEVKEDNNLSLVEYELVNVEE
Sbjct: 121 EPANFEVKEDNNLSLVEYELVNVEE 145

[Close]

BLAST of Tan0016705 vs. NCBI nr
Match: XP_008455497.1 (PREDICTED: uncharacterized protein At4g28440 [Cucumis melo] >KAA0059117.1 uncharacterized protein E6C27_scaffold430G00240 [Cucumis melo var. makuwa] >TYK21622.1 uncharacterized protein E5676_scaffold150G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 2.9e-67
Identity = 136/145 (93.79%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQL 60
           MATP  NAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGR+TM TAR QQL
Sbjct: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARN+QVDIMKPG T+TLRNAKIDMFKGSMRLAVDKWGRVEVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPANFEVKEDNNLSLVEYELVNVEE
Sbjct: 121 EPANFEVKEDNNLSLVEYELVNVEE 145

[Close]

BLAST of Tan0016705 vs. NCBI nr
Match: XP_004144523.1 (uncharacterized protein At4g28440 [Cucumis sativus] >KGN43465.1 hypothetical protein Csa_020344 [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 134/145 (92.41%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQL 60
           MATP  NAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGR+TM TAR QQL
Sbjct: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARN+QVD+MKPG T+TLRNAKIDMFKGSMRLAVDKWGRVEVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDLMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPANFE KEDNNLSLVEYELVNVEE
Sbjct: 121 EPANFEAKEDNNLSLVEYELVNVEE 145

[Close]

BLAST of Tan0016705 vs. NCBI nr
Match: XP_022988994.1 (uncharacterized protein At4g28440-like [Cucurbita maxima] >XP_023529810.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo] >KAG7022832.1 hypothetical protein SDJN02_16568 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65
Identity = 132/145 (91.03%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQL 60
           MATP VNAPAKRKPVFIKVE+LKPG+SGHTLTVKVVSSKNVKVVNKGGR+ M TAR QQL
Sbjct: 1   MATPAVNAPAKRKPVFIKVEDLKPGSSGHTLTVKVVSSKNVKVVNKGGRSAMPTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARN+QVD+MKPG T+TLRNAKIDMFKGSMRLAVDKWGR+EVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDLMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRIEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPA+FEVKEDNNLSLVEYELVNVEE
Sbjct: 121 EPADFEVKEDNNLSLVEYELVNVEE 145

[Close]

BLAST of Tan0016705 vs. NCBI nr
Match: KAG6589134.1 (hypothetical protein SDJN03_17699, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.5 bits (659), Expect = 3.6e-65
Identity = 131/145 (90.34%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQL 60
           MATP VNAPAKRKPVFIKVE+LKPG+SGHTLTVKVVSSKNVKVVNKGGR+ M TAR QQL
Sbjct: 1   MATPAVNAPAKRKPVFIKVEDLKPGSSGHTLTVKVVSSKNVKVVNKGGRSAMPTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARN+QVD++KPG T+TLRNAKIDMFKGSMRLAVDKWGR+EVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDLVKPGNTVTLRNAKIDMFKGSMRLAVDKWGRIEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPA+FEVKEDNNLSLVEYELVNVEE
Sbjct: 121 EPADFEVKEDNNLSLVEYELVNVEE 145

[Close]

BLAST of Tan0016705 vs. ExPASy TrEMBL
Match: A0A5A7UWS4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00200 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.4e-67
Identity = 136/145 (93.79%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQL 60
           MATP  NAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGR+TM TAR QQL
Sbjct: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARN+QVDIMKPG T+TLRNAKIDMFKGSMRLAVDKWGRVEVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPANFEVKEDNNLSLVEYELVNVEE
Sbjct: 121 EPANFEVKEDNNLSLVEYELVNVEE 145

[Close]

BLAST of Tan0016705 vs. ExPASy TrEMBL
Match: A0A1S3C119 (uncharacterized protein At4g28440 OS=Cucumis melo OX=3656 GN=LOC103495649 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.4e-67
Identity = 136/145 (93.79%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQL 60
           MATP  NAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGR+TM TAR QQL
Sbjct: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARN+QVDIMKPG T+TLRNAKIDMFKGSMRLAVDKWGRVEVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPANFEVKEDNNLSLVEYELVNVEE
Sbjct: 121 EPANFEVKEDNNLSLVEYELVNVEE 145

[Close]

BLAST of Tan0016705 vs. ExPASy TrEMBL
Match: A0A0A0K1C6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038160 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.0e-67
Identity = 134/145 (92.41%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 1   MATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQL 60
           MATP  NAPAKRKPVF+KVEELKPGTSGHTLTVKVVSSKNVKVVNKGGR+TM TAR QQL
Sbjct: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARN+QVD+MKPG T+TLRNAKIDMFKGSMRLAVDKWGRVEVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDLMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPANFE KEDNNLSLVEYELVNVEE
Sbjct: 121 EPANFEAKEDNNLSLVEYELVNVEE 145

[Close]

BLAST of Tan0016705 vs. ExPASy TrEMBL
Match: A0A6J1JN47 (uncharacterized protein At4g28440-like OS=Cucurbita maxima OX=3661 GN=LOC111486189 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.9e-66
Identity = 132/145 (91.03%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQL 60
           MATP VNAPAKRKPVFIKVE+LKPG+SGHTLTVKVVSSKNVKVVNKGGR+ M TAR QQL
Sbjct: 1   MATPAVNAPAKRKPVFIKVEDLKPGSSGHTLTVKVVSSKNVKVVNKGGRSAMPTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARN+QVD+MKPG T+TLRNAKIDMFKGSMRLAVDKWGR+EVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDLMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRIEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPA+FEVKEDNNLSLVEYELVNVEE
Sbjct: 121 EPADFEVKEDNNLSLVEYELVNVEE 145

[Close]

BLAST of Tan0016705 vs. ExPASy TrEMBL
Match: A0A6J1C327 (uncharacterized protein At4g28440-like OS=Momordica charantia OX=3673 GN=LOC111007815 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65
Identity = 133/145 (91.72%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQL 60
           MAT  VNAPAKRKPVFIKVEELKPGTSGHTL VKVVSSKNVK+VNKGGR+ M TAR QQL
Sbjct: 1   MATAAVNAPAKRKPVFIKVEELKPGTSGHTLIVKVVSSKNVKMVNKGGRSAMLTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARN+QVDIMKPG T+TLRNAKIDMFKGSMRLAVDKWGR+EVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRIEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPANFEVKEDNNLSLVEYELVNVEE
Sbjct: 121 EPANFEVKEDNNLSLVEYELVNVEE 145

[Close]

BLAST of Tan0016705 vs. TAIR 10
Match: AT2G33845.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 183.0 bits (463), Expect = 1.8e-46
Identity = 95/135 (70.37%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 11  KRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQLTRISECLVGD 70
           K+KPVF+KV++LKPGTSGHTLTVKVV   +V    K G A   ++ H +  RISECLVGD
Sbjct: 52  KKKPVFVKVDQLKPGTSGHTLTVKVVDQNSVP--QKPGAA---SSSHLRPARISECLVGD 111

Query: 71  ETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVAEPANFEVKED 130
           ET  I+FTARN+QV++MKPG T+ LRNAKIDMFKGSMRLAVDKWGR+E  EPA+  VKED
Sbjct: 112 ETACILFTARNDQVELMKPGATVNLRNAKIDMFKGSMRLAVDKWGRIEATEPADITVKED 171

Query: 131 NNLSLVEYELVNVEE 146
           NNLSLVEYELVNV E
Sbjct: 172 NNLSLVEYELVNVVE 181

[Close]

BLAST of Tan0016705 vs. TAIR 10
Match: AT4G28440.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 182.6 bits (462), Expect = 2.3e-46
Identity = 90/142 (63.38%), Postives = 111/142 (78.17%), Query Frame = 0


Query: 2   ATPTVNAPAKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQLT 61
           A  T  +  KRKPVF+KVE+LKPGT+GHTLTVKV+ +  V  V +  R   + +R  Q +
Sbjct: 8   AVATGTSTVKRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPS 67

Query: 62  RISECLVGDETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVAE 121
           RI ECL+GDETG I+FTARN+QVD+MKPG T+ LRN++IDMFKG+MRL VDKWGR+E   
Sbjct: 68  RIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATG 127

Query: 122 PANFEVKEDNNLSLVEYELVNV 144
            A+F VKEDNNLSLVEYEL+NV
Sbjct: 128 AASFTVKEDNNLSLVEYELINV 149

[Close]

BLAST of Tan0016705 vs. TAIR 10
Match: AT1G23750.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 176.0 bits (445), Expect = 2.2e-44
Identity = 92/134 (68.66%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 12  RKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQLTRISECLVGDE 71
           +KP F KV++L+PGTSGH + VK+VS+   K+V + GRA    AR     RISEC+VGDE
Sbjct: 10  KKPAFTKVDQLRPGTSGHNVNVKIVST---KMVLQKGRADGPQARQ---LRISECIVGDE 69

Query: 72  TGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVAEPANFEVKEDN 131
           TG IVFTARN+QVD+MK G T+TLRNAKIDM+KGSMRLAVDKWGRVEV EPA+F+VKED 
Sbjct: 70  TGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVKEDT 129

Query: 132 NLSLVEYELVNVEE 146
           N+SL+EYELVNV E
Sbjct: 130 NMSLIEYELVNVVE 137

[Close]

BLAST of Tan0016705 vs. TAIR 10
Match: AT1G10590.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 171.0 bits (432), Expect = 6.9e-43
Identity = 91/136 (66.91%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 10  AKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQLTRISECLVG 69
           A RKPVF KV EL+PGT+GH+L VKVV++K   V+ +GG   M     Q   RI+ECLVG
Sbjct: 7   ALRKPVFTKVNELRPGTNGHSLNVKVVNTK--MVMQRGGGRPMGPQSRQM--RIAECLVG 66

Query: 70  DETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA-EPANFEVK 129
           DETG I+FTARN+QVD+MK G  +TLRNAKIDM+KGSMRLAVD+WGRVEVA EP +  VK
Sbjct: 67  DETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVK 126

Query: 130 EDNNLSLVEYELVNVE 145
           +DNNLSL+EYELV+VE
Sbjct: 127 DDNNLSLIEYELVSVE 138

[Close]

BLAST of Tan0016705 vs. TAIR 10
Match: AT1G10590.3 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 171.0 bits (432), Expect = 6.9e-43
Identity = 91/136 (66.91%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 10  AKRKPVFIKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRATMNTARHQQLTRISECLVG 69
           A RKPVF KV EL+PGT+GH+L VKVV++K   V+ +GG   M     Q   RI+ECLVG
Sbjct: 21  ALRKPVFTKVNELRPGTNGHSLNVKVVNTK--MVMQRGGGRPMGPQSRQM--RIAECLVG 80

Query: 70  DETGSIVFTARNEQVDIMKPGITMTLRNAKIDMFKGSMRLAVDKWGRVEVA-EPANFEVK 129
           DETG I+FTARN+QVD+MK G  +TLRNAKIDM+KGSMRLAVD+WGRVEVA EP +  VK
Sbjct: 81  DETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVK 140

Query: 130 EDNNLSLVEYELVNVE 145
           +DNNLSL+EYELV+VE
Sbjct: 141 DDNNLSLIEYELVSVE 152

The following BLAST results are available for this feature:

BLAST of Tan0016705 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49453	3.2e-45	63.38	Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 P...	[more]

BLAST of Tan0016705 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887250.1	1.0e-67	94.48	uncharacterized protein At4g28440-like [Benincasa hispida]	[more]
XP_008455497.1	2.9e-67	93.79	PREDICTED: uncharacterized protein At4g28440 [Cucumis melo] >KAA0059117.1 unchar...	[more]
XP_004144523.1	1.4e-66	92.41	uncharacterized protein At4g28440 [Cucumis sativus] >KGN43465.1 hypothetical pro...	[more]
XP_022988994.1	1.2e-65	91.03	uncharacterized protein At4g28440-like [Cucurbita maxima] >XP_023529810.1 unchar...	[more]
KAG6589134.1	3.6e-65	90.34	hypothetical protein SDJN03_17699, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Tan0016705 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UWS4	1.4e-67	93.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C119	1.4e-67	93.79	uncharacterized protein At4g28440 OS=Cucumis melo OX=3656 GN=LOC103495649 PE=4 S...	[more]
A0A0A0K1C6	7.0e-67	92.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038160 PE=4 SV=1	[more]
A0A6J1JN47	5.9e-66	91.03	uncharacterized protein At4g28440-like OS=Cucurbita maxima OX=3661 GN=LOC1114861...	[more]
A0A6J1C327	1.7e-65	91.72	uncharacterized protein At4g28440-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Tan0016705 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33845.1	1.8e-46	70.37	Nucleic acid-binding, OB-fold-like protein	[more]
AT4G28440.1	2.3e-46	63.38	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G23750.1	2.2e-44	68.66	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G10590.1	6.9e-43	66.91	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G10590.3	6.9e-43	66.91	Nucleic acid-binding, OB-fold-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 26..135 e-value: 3.0E-41 score: 141.8
None	No IPR available	PANTHER	PTHR31472:SF13	EXPRESSED PROTEIN	coord: 5..144
None	No IPR available	PANTHER	PTHR31472	OS05G0244600 PROTEIN	coord: 5..144
None	No IPR available	CDD	cd04491	SoSSB_OBF	coord: 61..119 e-value: 9.10918E-15 score: 63.0257
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 6..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016705.1	Tan0016705.1	mRNA