Tan0016463 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCAATTTACAGCCTCTACATCATCAACAAATCTGGTGGCTTGATCTTCTACAAGGTAATCAACCCATTGAGATTTCTCTTTTATGCAATTGAAAAATTCAAATTTTTGTTTATTCCCACCTGGATGGGGAATTTTGATGCTTAATTTGGTTTCTGGAGGAAAATAAACGAGCCCCAAATCAAGATTTCAGTTTTTGATTTCATATAGGAAGGGTTAAATCACTCTGCTAGTCAATGTGATTATCAGAGTTCTAATCGACCTTTTACTTATGATGCATAAATCGATTTTGGGTGGAATTATTTATTCTATTTGGATTGAATCTCTTAATGGGTTTGTTTGAAAATTTAGGATTATGGGTCTGCTGGACGAATGGACACTAACGATAGCTTGAGAGTGGCGAGTTTATGGCATTCGATGCATGCCATTTCCCAGCAGCTTTCGCCTATCGCCGGTTGTTCGGGTGTTGAACTCCTTGAAGCTGACACATTCGACCTCCATTGCTTTCAGTCACTTACTGGTACATTTTTCCTTCCAGTCCCTTGTATACTTTTTCCATCAAACACATGGATTCTGTCTCAAACACTGTGATCTAAAGATAAGTAATTAAGTTTCAAAATGGGAAAGCACAATTGAAGTTCTAGGAACGTTATTGGGTGGAGATTTGAATCTCTCACCTTTTAGTTGAGATTAAAATGTTCCATAGTATAATTTTGTATTTCCTTGTTCAACAAGTTGTGAACTTTGCAGAGTTTCACGACGGTAACTTTCATTTTATATTGCTATGCTAGTTCTTAATGAAGAATGTTGAATCATGTTTATGTCACTAGGCTATGTCACTAGGCATTTGAGTGGCGCTTAGCCTAAAATGTAATGGTTTATTGCATCAGGGACAAAGTTTTTTGTCGTGTGTGAGCCCGGGACACAGCACATGGAGGGTCTTCTGAAATACATTTATGAGTTATACACAGATTATGTCTTGAAGAATCCATTCTATGAGATGGAGATGCCGATACGGTGTGAGCTCTTTGACATCAACCTAGTGCAGGCAGTGCAGAAGGATCGTGTTGCTTTGCTTGGCCGATGA ATGGCGGCAATTTACAGCCTCTACATCATCAACAAATCTGGTGGCTTGATCTTCTACAAGGATTATGGGTCTGCTGGACGAATGGACACTAACGATAGCTTGAGAGTGGCGAGTTTATGGCATTCGATGCATGCCATTTCCCAGCAGCTTTCGCCTATCGCCGGTTGTTCGGGTGTTGAACTCCTTGAAGCTGACACATTCGACCTCCATTGCTTTCAGTCACTTACTGGGACAAAGTTTTTTGTCGTGTGTGAGCCCGGGACACAGCACATGGAGGGTCTTCTGAAATACATTTATGAGTTATACACAGATTATGTCTTGAAGAATCCATTCTATGAGATGGAGATGCCGATACGGTGTGAGCTCTTTGACATCAACCTAGTGCAGGCAGTGCAGAAGGATCGTGTTGCTTTGCTTGGCCGATGA ATGGCGGCAATTTACAGCCTCTACATCATCAACAAATCTGGTGGCTTGATCTTCTACAAGGATTATGGGTCTGCTGGACGAATGGACACTAACGATAGCTTGAGAGTGGCGAGTTTATGGCATTCGATGCATGCCATTTCCCAGCAGCTTTCGCCTATCGCCGGTTGTTCGGGTGTTGAACTCCTTGAAGCTGACACATTCGACCTCCATTGCTTTCAGTCACTTACTGGGACAAAGTTTTTTGTCGTGTGTGAGCCCGGGACACAGCACATGGAGGGTCTTCTGAAATACATTTATGAGTTATACACAGATTATGTCTTGAAGAATCCATTCTATGAGATGGAGATGCCGATACGGTGTGAGCTCTTTGACATCAACCTAGTGCAGGCAGTGCAGAAGGATCGTGTTGCTTTGCTTGGCCGATGA MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRCELFDINLVQAVQKDRVALLGR Homology
BLAST of Tan0016463 vs. ExPASy Swiss-Prot
Match: Q54UU1 (Trafficking protein particle complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=trappc4 PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.9e-34 Identity = 66/125 (52.80%), Postives = 93/125 (74.40%), Query Frame = 0
BLAST of Tan0016463 vs. ExPASy Swiss-Prot
Match: Q2TBL9 (Trafficking protein particle complex subunit 4 OS=Bos taurus OX=9913 GN=TRAPPC4 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30 Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 0
BLAST of Tan0016463 vs. ExPASy Swiss-Prot
Match: Q9ES56 (Trafficking protein particle complex subunit 4 OS=Mus musculus OX=10090 GN=Trappc4 PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30 Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 0
BLAST of Tan0016463 vs. ExPASy Swiss-Prot
Match: Q69BT7 (Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30 Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 0
BLAST of Tan0016463 vs. ExPASy Swiss-Prot
Match: Q9Y296 (Trafficking protein particle complex subunit 4 OS=Homo sapiens OX=9606 GN=TRAPPC4 PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 3.7e-30 Identity = 59/106 (55.66%), Postives = 81/106 (76.42%), Query Frame = 0
BLAST of Tan0016463 vs. NCBI nr
Match: XP_022946574.1 (trafficking protein particle complex subunit 4-like [Cucurbita moschata] >XP_022946710.1 trafficking protein particle complex subunit 4-like [Cucurbita moschata] >XP_022999309.1 trafficking protein particle complex subunit 4-like [Cucurbita maxima] >XP_022999558.1 trafficking protein particle complex subunit 4-like [Cucurbita maxima] >XP_023545338.1 trafficking protein particle complex subunit 4-like [Cucurbita pepo subsp. pepo] >KAG6599001.1 Trafficking protein particle complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73 Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Tan0016463 vs. NCBI nr
Match: XP_023521099.1 (trafficking protein particle complex subunit 4-like [Cucurbita pepo subsp. pepo] >XP_023522176.1 trafficking protein particle complex subunit 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73 Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Tan0016463 vs. NCBI nr
Match: KAG6599171.1 (Trafficking protein particle complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73 Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Tan0016463 vs. NCBI nr
Match: KGN61053.2 (hypothetical protein Csa_021294 [Cucumis sativus]) HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73 Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Tan0016463 vs. NCBI nr
Match: XP_004144741.1 (trafficking protein particle complex subunit 4 [Cucumis sativus] >XP_038889173.1 trafficking protein particle complex subunit 4 [Benincasa hispida]) HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73 Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Tan0016463 vs. ExPASy TrEMBL
Match: A0A6J1KK16 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111493886 PE=3 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 7.5e-74 Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Tan0016463 vs. ExPASy TrEMBL
Match: A0A6J1G4Q4 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111450702 PE=3 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 7.5e-74 Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Tan0016463 vs. ExPASy TrEMBL
Match: A0A0A0LJ20 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_2G034720 PE=3 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 7.5e-74 Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Tan0016463 vs. ExPASy TrEMBL
Match: A0A6J1DUU4 (Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=LOC111023297 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73 Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Tan0016463 vs. ExPASy TrEMBL
Match: A0A5A7TWY1 (Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00730 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73 Identity = 137/141 (97.16%), Postives = 139/141 (98.58%), Query Frame = 0
BLAST of Tan0016463 vs. TAIR 10
Match: AT5G02280.1 (SNARE-like superfamily protein ) HSP 1 Score: 268.9 bits (686), Expect = 2.4e-72 Identity = 128/141 (90.78%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Tan0016463 vs. TAIR 10
Match: AT1G51160.1 (SNARE-like superfamily protein ) HSP 1 Score: 65.5 bits (158), Expect = 4.0e-11 Identity = 40/144 (27.78%), Postives = 68/144 (47.22%), Query Frame = 0
BLAST of Tan0016463 vs. TAIR 10
Match: AT1G51160.2 (SNARE-like superfamily protein ) HSP 1 Score: 65.5 bits (158), Expect = 4.0e-11 Identity = 40/144 (27.78%), Postives = 68/144 (47.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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