Tan0016463 (gene) Snake gourd v1

Overview
NameTan0016463
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTrafficking protein particle complex subunit
LocationLG08: 6856790 .. 6857879 (-)
RNA-Seq ExpressionTan0016463
SyntenyTan0016463
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCAATTTACAGCCTCTACATCATCAACAAATCTGGTGGCTTGATCTTCTACAAGGTAATCAACCCATTGAGATTTCTCTTTTATGCAATTGAAAAATTCAAATTTTTGTTTATTCCCACCTGGATGGGGAATTTTGATGCTTAATTTGGTTTCTGGAGGAAAATAAACGAGCCCCAAATCAAGATTTCAGTTTTTGATTTCATATAGGAAGGGTTAAATCACTCTGCTAGTCAATGTGATTATCAGAGTTCTAATCGACCTTTTACTTATGATGCATAAATCGATTTTGGGTGGAATTATTTATTCTATTTGGATTGAATCTCTTAATGGGTTTGTTTGAAAATTTAGGATTATGGGTCTGCTGGACGAATGGACACTAACGATAGCTTGAGAGTGGCGAGTTTATGGCATTCGATGCATGCCATTTCCCAGCAGCTTTCGCCTATCGCCGGTTGTTCGGGTGTTGAACTCCTTGAAGCTGACACATTCGACCTCCATTGCTTTCAGTCACTTACTGGTACATTTTTCCTTCCAGTCCCTTGTATACTTTTTCCATCAAACACATGGATTCTGTCTCAAACACTGTGATCTAAAGATAAGTAATTAAGTTTCAAAATGGGAAAGCACAATTGAAGTTCTAGGAACGTTATTGGGTGGAGATTTGAATCTCTCACCTTTTAGTTGAGATTAAAATGTTCCATAGTATAATTTTGTATTTCCTTGTTCAACAAGTTGTGAACTTTGCAGAGTTTCACGACGGTAACTTTCATTTTATATTGCTATGCTAGTTCTTAATGAAGAATGTTGAATCATGTTTATGTCACTAGGCTATGTCACTAGGCATTTGAGTGGCGCTTAGCCTAAAATGTAATGGTTTATTGCATCAGGGACAAAGTTTTTTGTCGTGTGTGAGCCCGGGACACAGCACATGGAGGGTCTTCTGAAATACATTTATGAGTTATACACAGATTATGTCTTGAAGAATCCATTCTATGAGATGGAGATGCCGATACGGTGTGAGCTCTTTGACATCAACCTAGTGCAGGCAGTGCAGAAGGATCGTGTTGCTTTGCTTGGCCGATGA

mRNA sequence

ATGGCGGCAATTTACAGCCTCTACATCATCAACAAATCTGGTGGCTTGATCTTCTACAAGGATTATGGGTCTGCTGGACGAATGGACACTAACGATAGCTTGAGAGTGGCGAGTTTATGGCATTCGATGCATGCCATTTCCCAGCAGCTTTCGCCTATCGCCGGTTGTTCGGGTGTTGAACTCCTTGAAGCTGACACATTCGACCTCCATTGCTTTCAGTCACTTACTGGGACAAAGTTTTTTGTCGTGTGTGAGCCCGGGACACAGCACATGGAGGGTCTTCTGAAATACATTTATGAGTTATACACAGATTATGTCTTGAAGAATCCATTCTATGAGATGGAGATGCCGATACGGTGTGAGCTCTTTGACATCAACCTAGTGCAGGCAGTGCAGAAGGATCGTGTTGCTTTGCTTGGCCGATGA

Coding sequence (CDS)

ATGGCGGCAATTTACAGCCTCTACATCATCAACAAATCTGGTGGCTTGATCTTCTACAAGGATTATGGGTCTGCTGGACGAATGGACACTAACGATAGCTTGAGAGTGGCGAGTTTATGGCATTCGATGCATGCCATTTCCCAGCAGCTTTCGCCTATCGCCGGTTGTTCGGGTGTTGAACTCCTTGAAGCTGACACATTCGACCTCCATTGCTTTCAGTCACTTACTGGGACAAAGTTTTTTGTCGTGTGTGAGCCCGGGACACAGCACATGGAGGGTCTTCTGAAATACATTTATGAGTTATACACAGATTATGTCTTGAAGAATCCATTCTATGAGATGGAGATGCCGATACGGTGTGAGCTCTTTGACATCAACCTAGTGCAGGCAGTGCAGAAGGATCGTGTTGCTTTGCTTGGCCGATGA

Protein sequence

MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRCELFDINLVQAVQKDRVALLGR
Homology
BLAST of Tan0016463 vs. ExPASy Swiss-Prot
Match: Q54UU1 (Trafficking protein particle complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=trappc4 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.9e-34
Identity = 66/125 (52.80%), Postives = 93/125 (74.40%), Query Frame = 0

Query: 4   IYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAG-CSGVELL 63
           I S+YI+NK+G LI+  D+G+  ++  N  +R+ S +HS+HAI+  LSP++G  SG+E++
Sbjct: 3   INSIYILNKAGTLIYQNDFGNTEKLSHNSYIRLGSTFHSLHAIASNLSPVSGSSSGIEVI 62

Query: 64  EADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRCEL 123
           E + F L CFQ+ TG KF+V+ +P  Q +E LL  +YELYTDYVLKNPFYE+EM IRC+L
Sbjct: 63  ETEAFKLQCFQTHTGIKFYVIADPNHQQLEELLHGVYELYTDYVLKNPFYEIEMQIRCDL 122

Query: 124 FDINL 128
           FD  L
Sbjct: 123 FDYKL 127

BLAST of Tan0016463 vs. ExPASy Swiss-Prot
Match: Q2TBL9 (Trafficking protein particle complex subunit 4 OS=Bos taurus OX=9913 GN=TRAPPC4 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30
Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 0

Query: 27  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEP 86
           R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHCFQ+LTG KF V+ +P
Sbjct: 102 RLTSNEKLMLASMFHSLFAIGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADP 161

Query: 87  GTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRCELFDINLVQAVQ 133
               ++ LL+ IYE+Y+D+ LKNPFY +EMPIRCELFD NL  A++
Sbjct: 162 RQAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALE 207

BLAST of Tan0016463 vs. ExPASy Swiss-Prot
Match: Q9ES56 (Trafficking protein particle complex subunit 4 OS=Mus musculus OX=10090 GN=Trappc4 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30
Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 0

Query: 27  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEP 86
           R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHCFQ+LTG KF V+ +P
Sbjct: 102 RLTSNEKLMLASMFHSLFAIGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADP 161

Query: 87  GTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRCELFDINLVQAVQ 133
               ++ LL+ IYE+Y+D+ LKNPFY +EMPIRCELFD NL  A++
Sbjct: 162 RQAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALE 207

BLAST of Tan0016463 vs. ExPASy Swiss-Prot
Match: Q69BT7 (Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30
Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 0

Query: 27  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEP 86
           R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHCFQ+LTG KF V+ +P
Sbjct: 102 RLTSNEKLMLASMFHSLFAIGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADP 161

Query: 87  GTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRCELFDINLVQAVQ 133
               ++ LL+ IYE+Y+D+ LKNPFY +EMPIRCELFD NL  A++
Sbjct: 162 RQAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALE 207

BLAST of Tan0016463 vs. ExPASy Swiss-Prot
Match: Q9Y296 (Trafficking protein particle complex subunit 4 OS=Homo sapiens OX=9606 GN=TRAPPC4 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.7e-30
Identity = 59/106 (55.66%), Postives = 81/106 (76.42%), Query Frame = 0

Query: 27  RMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKFFVVCEP 86
           R+ +N+ L +AS++HS+ AI  QLSP  G SG+E+LE DTF LHC+Q+LTG KF V+ +P
Sbjct: 102 RLTSNEKLMLASMFHSLFAIGSQLSPEQGSSGIEMLETDTFKLHCYQTLTGIKFVVLADP 161

Query: 87  GTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRCELFDINLVQAVQ 133
               ++ LL+ IYE+Y+D+ LKNPFY +EMPIRCELFD NL  A++
Sbjct: 162 RQAGIDSLLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALE 207

BLAST of Tan0016463 vs. NCBI nr
Match: XP_022946574.1 (trafficking protein particle complex subunit 4-like [Cucurbita moschata] >XP_022946710.1 trafficking protein particle complex subunit 4-like [Cucurbita moschata] >XP_022999309.1 trafficking protein particle complex subunit 4-like [Cucurbita maxima] >XP_022999558.1 trafficking protein particle complex subunit 4-like [Cucurbita maxima] >XP_023545338.1 trafficking protein particle complex subunit 4-like [Cucurbita pepo subsp. pepo] >KAG6599001.1 Trafficking protein particle complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPISGCSGTE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGT HMEGLLKYIYELYTDYVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTLHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLVQAVQKDRVALLGR 142
           ELFDINLVQAVQKDRVALLGR
Sbjct: 121 ELFDINLVQAVQKDRVALLGR 141

BLAST of Tan0016463 vs. NCBI nr
Match: XP_023521099.1 (trafficking protein particle complex subunit 4-like [Cucurbita pepo subsp. pepo] >XP_023522176.1 trafficking protein particle complex subunit 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPISGCSGTE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGT HMEGLLKYIYELYTDYVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTVHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLVQAVQKDRVALLGR 142
           ELFDINLVQAVQKDRVALLGR
Sbjct: 121 ELFDINLVQAVQKDRVALLGR 141

BLAST of Tan0016463 vs. NCBI nr
Match: KAG6599171.1 (Trafficking protein particle complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG E
Sbjct: 46  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPISGCSGTE 105

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGT HMEGLLKYIYELYTDYVLKNPFYEMEMPIRC
Sbjct: 106 LLEADTFDLHCFQSLTGTKFFVVCEPGTLHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 165

Query: 121 ELFDINLVQAVQKDRVALLGR 142
           ELFDINLVQAVQKDRVALLGR
Sbjct: 166 ELFDINLVQAVQKDRVALLGR 186

BLAST of Tan0016463 vs. NCBI nr
Match: KGN61053.2 (hypothetical protein Csa_021294 [Cucumis sativus])

HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE
Sbjct: 444 MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 503

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYELYTD+VLKNPFYEMEMPIRC
Sbjct: 504 LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 563

Query: 121 ELFDINLVQAVQKDRVALLGR 142
           ELFDINL QAVQKDRVALLGR
Sbjct: 564 ELFDINLAQAVQKDRVALLGR 584

BLAST of Tan0016463 vs. NCBI nr
Match: XP_004144741.1 (trafficking protein particle complex subunit 4 [Cucumis sativus] >XP_038889173.1 trafficking protein particle complex subunit 4 [Benincasa hispida])

HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYELYTD+VLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLVQAVQKDRVALLGR 142
           ELFDINL QAVQKDRVALLGR
Sbjct: 121 ELFDINLAQAVQKDRVALLGR 141

BLAST of Tan0016463 vs. ExPASy TrEMBL
Match: A0A6J1KK16 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111493886 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 7.5e-74
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPISGCSGTE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGT HMEGLLKYIYELYTDYVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTLHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLVQAVQKDRVALLGR 142
           ELFDINLVQAVQKDRVALLGR
Sbjct: 121 ELFDINLVQAVQKDRVALLGR 141

BLAST of Tan0016463 vs. ExPASy TrEMBL
Match: A0A6J1G4Q4 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111450702 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 7.5e-74
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPISGCSGTE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGT HMEGLLKYIYELYTDYVLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTLHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLVQAVQKDRVALLGR 142
           ELFDINLVQAVQKDRVALLGR
Sbjct: 121 ELFDINLVQAVQKDRVALLGR 141

BLAST of Tan0016463 vs. ExPASy TrEMBL
Match: A0A0A0LJ20 (Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_2G034720 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 7.5e-74
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYELYTD+VLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLVQAVQKDRVALLGR 142
           ELFDINL QAVQKDRVALLGR
Sbjct: 121 ELFDINLAQAVQKDRVALLGR 141

BLAST of Tan0016463 vs. ExPASy TrEMBL
Match: A0A6J1DUU4 (Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=LOC111023297 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73
Identity = 136/141 (96.45%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPI+GCSG+E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPISGCSGIE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTD+VLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLVQAVQKDRVALLGR 142
           ELFDINL QAVQKDRVAL GR
Sbjct: 121 ELFDINLSQAVQKDRVALFGR 141

BLAST of Tan0016463 vs. ExPASy TrEMBL
Match: A0A5A7TWY1 (Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00730 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73
Identity = 137/141 (97.16%), Postives = 139/141 (98.58%), Query Frame = 0

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYELYTD+VLKNPFYEMEMPIRC
Sbjct: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRC 120

Query: 121 ELFDINLVQAVQKDRVALLGR 142
           ELFDINL QAVQK+RVALLGR
Sbjct: 121 ELFDINLAQAVQKERVALLGR 141

BLAST of Tan0016463 vs. TAIR 10
Match: AT5G02280.1 (SNARE-like superfamily protein )

HSP 1 Score: 268.9 bits (686), Expect = 2.4e-72
Identity = 128/141 (90.78%), Postives = 133/141 (94.33%), Query Frame = 0

Query: 1   MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVE 60
           MAAIYSLYIINKSGGLIFYKD G+ GRMDTNDSLRVASLWHSMHAISQQLSP+ GCSG+E
Sbjct: 1   MAAIYSLYIINKSGGLIFYKDCGTKGRMDTNDSLRVASLWHSMHAISQQLSPVNGCSGIE 60

Query: 61  LLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLKNPFYEMEMPIRC 120
           LLEADTFDLHCFQSL GTKFFVVCEPGT HME LL+YIYELYTDYVLKNPFYE+EMPIRC
Sbjct: 61  LLEADTFDLHCFQSLPGTKFFVVCEPGTPHMESLLRYIYELYTDYVLKNPFYEIEMPIRC 120

Query: 121 ELFDINLVQAVQKDRVALLGR 142
           ELFDINL QAVQ DRVALLGR
Sbjct: 121 ELFDINLTQAVQSDRVALLGR 141

BLAST of Tan0016463 vs. TAIR 10
Match: AT1G51160.1 (SNARE-like superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 4.0e-11
Identity = 40/144 (27.78%), Postives = 68/144 (47.22%), Query Frame = 0

Query: 5   YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPI--------- 64
           + +Y+ N++G  + YK++           D   +  L  S+ +++ ++ P+         
Sbjct: 24  HMMYVFNRNGVCLLYKEWNRPLHTLNPQQDHKLMFGLLFSLKSLTAKMDPVNADKGNLGV 83

Query: 65  -----AGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLK 124
                 GCS       +T+ L   ++ +G K  +V  P T  +   LKYIY LY +YV+K
Sbjct: 84  PQLPGQGCS-FHSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIYSLYVEYVVK 143

Query: 125 NPFYEMEMPIRCELFDINLVQAVQ 133
           NP Y    PI+ ELF+  L Q V+
Sbjct: 144 NPIYSPGSPIKSELFNTALDQYVR 166

BLAST of Tan0016463 vs. TAIR 10
Match: AT1G51160.2 (SNARE-like superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 4.0e-11
Identity = 40/144 (27.78%), Postives = 68/144 (47.22%), Query Frame = 0

Query: 5   YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPI--------- 64
           + +Y+ N++G  + YK++           D   +  L  S+ +++ ++ P+         
Sbjct: 24  HMMYVFNRNGVCLLYKEWNRPLHTLNPQQDHKLMFGLLFSLKSLTAKMDPVNADKGNLGV 83

Query: 65  -----AGCSGVELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDYVLK 124
                 GCS       +T+ L   ++ +G K  +V  P T  +   LKYIY LY +YV+K
Sbjct: 84  PQLPGQGCS-FHSFRTNTYKLSFMETPSGIKIILVTHPKTGDLRESLKYIYSLYVEYVVK 143

Query: 125 NPFYEMEMPIRCELFDINLVQAVQ 133
           NP Y    PI+ ELF+  L Q V+
Sbjct: 144 NPIYSPGSPIKSELFNTALDQYVR 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q54UU11.9e-3452.80Trafficking protein particle complex subunit 4 OS=Dictyostelium discoideum OX=44... [more]
Q2TBL91.7e-3056.60Trafficking protein particle complex subunit 4 OS=Bos taurus OX=9913 GN=TRAPPC4 ... [more]
Q9ES561.7e-3056.60Trafficking protein particle complex subunit 4 OS=Mus musculus OX=10090 GN=Trapp... [more]
Q69BT71.7e-3056.60Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=... [more]
Q9Y2963.7e-3055.66Trafficking protein particle complex subunit 4 OS=Homo sapiens OX=9606 GN=TRAPPC... [more]
Match NameE-valueIdentityDescription
XP_022946574.11.5e-7397.87trafficking protein particle complex subunit 4-like [Cucurbita moschata] >XP_022... [more]
XP_023521099.11.5e-7397.87trafficking protein particle complex subunit 4-like [Cucurbita pepo subsp. pepo]... [more]
KAG6599171.11.5e-7397.87Trafficking protein particle complex subunit 4, partial [Cucurbita argyrosperma ... [more]
KGN61053.21.5e-7397.87hypothetical protein Csa_021294 [Cucumis sativus][more]
XP_004144741.11.5e-7397.87trafficking protein particle complex subunit 4 [Cucumis sativus] >XP_038889173.1... [more]
Match NameE-valueIdentityDescription
A0A6J1KK167.5e-7497.87Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1G4Q47.5e-7497.87Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A0A0LJ207.5e-7497.87Trafficking protein particle complex subunit OS=Cucumis sativus OX=3659 GN=Csa_2... [more]
A0A6J1DUU42.2e-7396.45Trafficking protein particle complex subunit OS=Momordica charantia OX=3673 GN=L... [more]
A0A5A7TWY12.2e-7397.16Trafficking protein particle complex subunit OS=Cucumis melo var. makuwa OX=1194... [more]
Match NameE-valueIdentityDescription
AT5G02280.12.4e-7290.78SNARE-like superfamily protein [more]
AT1G51160.14.0e-1127.78SNARE-like superfamily protein [more]
AT1G51160.24.0e-1127.78SNARE-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007233Trafficking protein particle complex subunitSMARTSM01399Sybindin_2coord: 4..134
e-value: 1.5E-70
score: 250.3
IPR007233Trafficking protein particle complex subunitPFAMPF04099Sybindincoord: 4..133
e-value: 1.0E-52
score: 177.9
IPR007233Trafficking protein particle complex subunitPANTHERPTHR23249TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITcoord: 1..141
NoneNo IPR availableGENE3D3.30.450.70coord: 2..133
e-value: 1.7E-48
score: 166.6
NoneNo IPR availablePANTHERPTHR23249:SF17TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT-RELATEDcoord: 1..141
NoneNo IPR availableCDDcd14856TRAPPC4_synbindincoord: 5..130
e-value: 6.53543E-85
score: 242.424
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0016463.1Tan0016463.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0030008 TRAPP complex