Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTGGAAAGAACAAGCCGGAAGAGGAAGAAGAACAACAACGGTTTTGATTTGCCAAAGAAGGAGAAGCAAAGGGAGATCGTGTTTTCGACGACGATCGAGATGTCGACGTCGCTGAGAGATCGGATTGTCGAGATCGGCGCCTCCGACATCCAAATTGTGGTTCAAAAGAAACTGCAAGACACCGATCTCAACAAGAACCACGGTCGATTATTGATTCCGACCAAGAAACTTGTAAACGATTTCGTTACCGAAGAGGAGAGGAAGTTTTGTTGAGGCAACAAGCTGGTAAAGATCAGAAAAACAAGAATGGAATGAAGGTGCTCATAATCGATCCTCTTTTGAGAGAGAGTGTAATTGGATTGAAAATATGGAAGATTGGAAGTCAAGAAACTTTTTGTTTGGTGTCTGAGTGGAATTCTTTAGCGCAACAAAATTCATTAGAAAGTGGAGATTATATCCAACTTTGGAGTTTTAGAAAGAATAGTTTTGCTGCTGAAACAGTGACCTCTAATCTTTGTTTTGCCTTAGTTAAGCTTGATATCTCTGAGGGAATCTTTAAATTTATATAA
mRNA sequence
ATGGCATTGGAAAGAACAAGCCGGAAGAGGAAGAAGAACAACAACGGTTTTGATTTGCCAAAGAAGGAGAAGCAAAGGGAGATCGTGTTTTCGACGACGATCGAGATGTCGACGTCGCTGAGAGATCGGATTGTCGAGATCGGCGCCTCCGACATCCAAATTGTGGTTCAAAAGAAACTGCAAGACACCGATCTCAACAAGAACCACGGTCGATTATTGATTCCGACCAAGAAACTTGAAGTTTTGTTGAGGCAACAAGCTGGTAAAGATCAGAAAAACAAGAATGGAATGAAGGTGCTCATAATCGATCCTCTTTTGAGAGAGACGCAACAAAATTCATTAGAAAGTGGAGATTATATCCAACTTTGGAGTTTTAGAAAGAATAGTTTTGCTGCTGAAACAGTGACCTCTAATCTTTGTTTTGCCTTAGTTAAGCTTGATATCTCTGAGGGAATCTTTAAATTTATATAA
Coding sequence (CDS)
ATGGCATTGGAAAGAACAAGCCGGAAGAGGAAGAAGAACAACAACGGTTTTGATTTGCCAAAGAAGGAGAAGCAAAGGGAGATCGTGTTTTCGACGACGATCGAGATGTCGACGTCGCTGAGAGATCGGATTGTCGAGATCGGCGCCTCCGACATCCAAATTGTGGTTCAAAAGAAACTGCAAGACACCGATCTCAACAAGAACCACGGTCGATTATTGATTCCGACCAAGAAACTTGAAGTTTTGTTGAGGCAACAAGCTGGTAAAGATCAGAAAAACAAGAATGGAATGAAGGTGCTCATAATCGATCCTCTTTTGAGAGAGACGCAACAAAATTCATTAGAAAGTGGAGATTATATCCAACTTTGGAGTTTTAGAAAGAATAGTTTTGCTGCTGAAACAGTGACCTCTAATCTTTGTTTTGCCTTAGTTAAGCTTGATATCTCTGAGGGAATCTTTAAATTTATATAA
Protein sequence
MALERTSRKRKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKLEVLLRQQAGKDQKNKNGMKVLIIDPLLRETQQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI
Homology
BLAST of Tan0016450 vs. NCBI nr
Match:
XP_008445565.1 (PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo] >KAA0065235.1 B3 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 169.1 bits (427), Expect = 3.0e-38
Identity = 107/195 (54.87%), Postives = 123/195 (63.08%), Query Frame = 0
Query: 5 RTSRKRKKNNN--GFD-LPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQ 64
+ S KRKKN+N G D PKKE+++++VFS TIEMS LRDRI E+ DIQ V QK+LQ
Sbjct: 59 KASEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQ 118
Query: 65 DTDLNKNHGRLLIPTKKL---------EVLLRQQAGKDQKNKNGMKVLIIDPLLRE---- 124
DTD+NKNHGRLLIP KKL + LL+Q +D KNKNGM VLIIDP LR
Sbjct: 119 DTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIE 178
Query: 125 ---------------------TQQNSLESGDYIQLWSFRKNSF------AAETVTSNLCF 157
Q+NSLESGDYIQLWSFR N+ + V SNLCF
Sbjct: 179 LKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCF 238
BLAST of Tan0016450 vs. NCBI nr
Match:
XP_022144152.1 (B3 domain-containing protein At2g31420-like [Momordica charantia])
HSP 1 Score: 160.2 bits (404), Expect = 1.4e-35
Identity = 95/169 (56.21%), Postives = 109/169 (64.50%), Query Frame = 0
Query: 21 KKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL- 80
KK KQ E+VFS+TIEM LRDRI E+G DIQIV+QK+LQDTDLN+NHGRL IP KKL
Sbjct: 37 KKHKQLEVVFSSTIEMPAXLRDRIAELGGYDIQIVIQKRLQDTDLNRNHGRLSIPIKKLL 96
Query: 81 -------EVLLRQQAGKDQKNKNGMKVLIIDPLLRET----------------------- 140
E L Q + Q NKNG+ LI+DP LRE+
Sbjct: 97 NDFTTEEEKQLLDQQDEHQNNKNGVXALILDPCLRESTIHLKKWKIGSREIYCLVSQWNS 156
Query: 141 --QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI 157
Q+NSLESGD+IQLWSFRKNS T T +LCFALVKLDISEGIF+FI
Sbjct: 157 LAQKNSLESGDFIQLWSFRKNS---GTPTPHLCFALVKLDISEGIFRFI 202
BLAST of Tan0016450 vs. NCBI nr
Match:
XP_004152777.2 (putative B3 domain-containing protein At2g27410 [Cucumis sativus] >KAE8652107.1 hypothetical protein Csa_022429 [Cucumis sativus])
HSP 1 Score: 158.7 bits (400), Expect = 4.1e-35
Identity = 101/197 (51.27%), Postives = 120/197 (60.91%), Query Frame = 0
Query: 4 ERTSRKRKKNNN----GFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKK 63
+R +R++ NNN PKKE+++++VFS TIEM LRDRI E+G +IQ QK+
Sbjct: 62 KRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQKR 121
Query: 64 LQDTDLNKNHGRLLIPTKKL---------EVLLRQQAGKDQKNKNGMKVLIIDPLLRETQ 123
LQDTD+NKNHGRLLIP KKL + LL+Q +D KNKNGM VLIIDP LR Q
Sbjct: 122 LQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLRNRQ 181
Query: 124 -------------------------QNSLESGDYIQLWSFRK-NSF-----AAETVTSNL 157
+NSLESGDYIQLWSFR N+F A + SNL
Sbjct: 182 IGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPINSNL 241
BLAST of Tan0016450 vs. NCBI nr
Match:
XP_023546349.1 (B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 152.5 bits (384), Expect = 3.0e-33
Identity = 86/182 (47.25%), Postives = 118/182 (64.84%), Query Frame = 0
Query: 10 RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNH 69
++KN + D PK++++RE+VFS+T+EM +LR+RI +G +D+Q+V QK+LQ++D NKNH
Sbjct: 43 KRKNRDCDDEPKRKRRREMVFSSTVEMPAALRERIEAMGGTDVQLVTQKQLQESDRNKNH 102
Query: 70 GRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKVLIIDPLLRET---------- 129
GRLLIPTKKL E++++++ + ++ + GM+V IID LRET
Sbjct: 103 GRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSALRETVIGLKLWKIG 162
Query: 130 ---------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFK 157
+QNSLESGDYIQLWSFR N+ A LCFALVKLDISEGIF
Sbjct: 163 SGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHTLCFALVKLDISEGIFN 222
BLAST of Tan0016450 vs. NCBI nr
Match:
XP_022997537.1 (B3 domain-containing protein At1g05920-like [Cucurbita maxima])
HSP 1 Score: 151.4 bits (381), Expect = 6.6e-33
Identity = 86/182 (47.25%), Postives = 119/182 (65.38%), Query Frame = 0
Query: 10 RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNH 69
++KN + D P+++++RE+VFS+T+EM +LR RI +G +D+QIV+QK+LQ++D NKNH
Sbjct: 23 KRKNRDCDDEPRRKRRREMVFSSTVEMPAALRQRIEAMGGTDVQIVMQKQLQESDRNKNH 82
Query: 70 GRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKVLIIDPLLRET---------- 129
GRLLIPTKKL E++++++ + ++ + GM+V IID LRE+
Sbjct: 83 GRLLIPTKKLMNEFATEEEAELMMQEEVDRRRRMRIGMEVAIIDAALRESVIGLKLWKIG 142
Query: 130 ---------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFK 157
+QNSLESGDYIQLWSFR N+ A NLCFALVKLDISEGIF
Sbjct: 143 SGHNYCLASQWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNGHNLCFALVKLDISEGIFN 202
BLAST of Tan0016450 vs. ExPASy TrEMBL
Match:
A0A5A7VHB3 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005760 PE=4 SV=1)
HSP 1 Score: 169.1 bits (427), Expect = 1.5e-38
Identity = 107/195 (54.87%), Postives = 123/195 (63.08%), Query Frame = 0
Query: 5 RTSRKRKKNNN--GFD-LPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQ 64
+ S KRKKN+N G D PKKE+++++VFS TIEMS LRDRI E+ DIQ V QK+LQ
Sbjct: 59 KASEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQ 118
Query: 65 DTDLNKNHGRLLIPTKKL---------EVLLRQQAGKDQKNKNGMKVLIIDPLLRE---- 124
DTD+NKNHGRLLIP KKL + LL+Q +D KNKNGM VLIIDP LR
Sbjct: 119 DTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIE 178
Query: 125 ---------------------TQQNSLESGDYIQLWSFRKNSF------AAETVTSNLCF 157
Q+NSLESGDYIQLWSFR N+ + V SNLCF
Sbjct: 179 LKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCF 238
BLAST of Tan0016450 vs. ExPASy TrEMBL
Match:
A0A1S3BCJ5 (B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488545 PE=4 SV=1)
HSP 1 Score: 169.1 bits (427), Expect = 1.5e-38
Identity = 107/195 (54.87%), Postives = 123/195 (63.08%), Query Frame = 0
Query: 5 RTSRKRKKNNN--GFD-LPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQ 64
+ S KRKKN+N G D PKKE+++++VFS TIEMS LRDRI E+ DIQ V QK+LQ
Sbjct: 59 KASEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQ 118
Query: 65 DTDLNKNHGRLLIPTKKL---------EVLLRQQAGKDQKNKNGMKVLIIDPLLRE---- 124
DTD+NKNHGRLLIP KKL + LL+Q +D KNKNGM VLIIDP LR
Sbjct: 119 DTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLRNRHIE 178
Query: 125 ---------------------TQQNSLESGDYIQLWSFRKNSF------AAETVTSNLCF 157
Q+NSLESGDYIQLWSFR N+ + V SNLCF
Sbjct: 179 LKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVNSNLCF 238
BLAST of Tan0016450 vs. ExPASy TrEMBL
Match:
A0A6J1CSV9 (B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LOC111013909 PE=4 SV=1)
HSP 1 Score: 160.2 bits (404), Expect = 6.9e-36
Identity = 95/169 (56.21%), Postives = 109/169 (64.50%), Query Frame = 0
Query: 21 KKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNHGRLLIPTKKL- 80
KK KQ E+VFS+TIEM LRDRI E+G DIQIV+QK+LQDTDLN+NHGRL IP KKL
Sbjct: 37 KKHKQLEVVFSSTIEMPAXLRDRIAELGGYDIQIVIQKRLQDTDLNRNHGRLSIPIKKLL 96
Query: 81 -------EVLLRQQAGKDQKNKNGMKVLIIDPLLRET----------------------- 140
E L Q + Q NKNG+ LI+DP LRE+
Sbjct: 97 NDFTTEEEKQLLDQQDEHQNNKNGVXALILDPCLRESTIHLKKWKIGSREIYCLVSQWNS 156
Query: 141 --QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFKFI 157
Q+NSLESGD+IQLWSFRKNS T T +LCFALVKLDISEGIF+FI
Sbjct: 157 LAQKNSLESGDFIQLWSFRKNS---GTPTPHLCFALVKLDISEGIFRFI 202
BLAST of Tan0016450 vs. ExPASy TrEMBL
Match:
A0A6J1K5B4 (B3 domain-containing protein At1g05920-like OS=Cucurbita maxima OX=3661 GN=LOC111492430 PE=4 SV=1)
HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33
Identity = 86/182 (47.25%), Postives = 119/182 (65.38%), Query Frame = 0
Query: 10 RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNH 69
++KN + D P+++++RE+VFS+T+EM +LR RI +G +D+QIV+QK+LQ++D NKNH
Sbjct: 23 KRKNRDCDDEPRRKRRREMVFSSTVEMPAALRQRIEAMGGTDVQIVMQKQLQESDRNKNH 82
Query: 70 GRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKVLIIDPLLRET---------- 129
GRLLIPTKKL E++++++ + ++ + GM+V IID LRE+
Sbjct: 83 GRLLIPTKKLMNEFATEEEAELMMQEEVDRRRRMRIGMEVAIIDAALRESVIGLKLWKIG 142
Query: 130 ---------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFK 157
+QNSLESGDYIQLWSFR N+ A NLCFALVKLDISEGIF
Sbjct: 143 SGHNYCLASQWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNGHNLCFALVKLDISEGIFN 202
BLAST of Tan0016450 vs. ExPASy TrEMBL
Match:
A0A6J1HD06 (B3 domain-containing protein At1g05920-like OS=Cucurbita moschata OX=3662 GN=LOC111462959 PE=4 SV=1)
HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 84/182 (46.15%), Postives = 118/182 (64.84%), Query Frame = 0
Query: 10 RKKNNNGFDLPKKEKQREIVFSTTIEMSTSLRDRIVEIGASDIQIVVQKKLQDTDLNKNH 69
++KN + D P+++++RE+VFS+T+EM +LR RI +G +D+Q+V QK+LQ++D NKNH
Sbjct: 23 KRKNRDCDDEPRRKRRREMVFSSTVEMPAALRQRIEAMGGTDVQLVTQKQLQESDRNKNH 82
Query: 70 GRLLIPTKKL----------EVLLRQQAGKDQKNKNGMKVLIIDPLLRET---------- 129
GRLLIPTKKL E++++++ + ++ + GM+V IID LRE+
Sbjct: 83 GRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDAALRESVIGLKLWKIG 142
Query: 130 ---------------QQNSLESGDYIQLWSFRKNSFAAETVTSNLCFALVKLDISEGIFK 157
+QNSLESGDYIQLWSFR N+ A +LCFALVKLDISEGIF
Sbjct: 143 SGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHSLCFALVKLDISEGIFN 202
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_008445565.1 | 3.0e-38 | 54.87 | PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo] >KAA006523... | [more] |
| XP_022144152.1 | 1.4e-35 | 56.21 | B3 domain-containing protein At2g31420-like [Momordica charantia] | [more] |
| XP_004152777.2 | 4.1e-35 | 51.27 | putative B3 domain-containing protein At2g27410 [Cucumis sativus] >KAE8652107.1 ... | [more] |
| XP_023546349.1 | 3.0e-33 | 47.25 | B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_022997537.1 | 6.6e-33 | 47.25 | B3 domain-containing protein At1g05920-like [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VHB3 | 1.5e-38 | 54.87 | B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... | [more] |
| A0A1S3BCJ5 | 1.5e-38 | 54.87 | B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488... | [more] |
| A0A6J1CSV9 | 6.9e-36 | 56.21 | B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LO... | [more] |
| A0A6J1K5B4 | 3.2e-33 | 47.25 | B3 domain-containing protein At1g05920-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
| A0A6J1HD06 | 1.2e-32 | 46.15 | B3 domain-containing protein At1g05920-like OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
