Tan0016442 (gene) Snake gourd v1

Overview


Name	Tan0016442
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Glutaredoxin domain-containing protein
Location	LG06: 7328418 .. 7331502 (+)
RNA-Seq Expression	Tan0016442
Synteny	Tan0016442

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTCCATTTCGGCTTGCATCATTGATCATAATTTGACATGTTCCAGATCGATCGAATCAATTTCAAGAGTTATTTTCAACTTTTTTTTTTTCTTTCGGCTTGCAATTCTCCTGAACAAAAAACAAGGCGGTGAAAGAGATTGAAATTTTTGGAGCATGAAAAGACATTGCCCCATCTTTGTTCATGGAAACTATTCATTCATTCGCTGAATTTCGATCTCTCAATTATACATTTGCATTATTCAAATGGAATCTCTCAACACAACGAGTGATGTCATGATCCAGCACGAAGAAGATTCCGCGTCACATTAATCCGTATGTGAAATCTCTGTAAGCAATTGCCCTTACATCTTCTCTGTTCTGATGAATTTTCTTCGTTTCTTTTACGGATTTAAGAAACTTAACGAGCTGAAGTTTTCAATTGTTTCAAAGGGGAATTTGTTGATTTCGACGGTGACTTCTTAGACACTGCTCTTTAATCTTGAGATTCACGTTTTGCATCTCTATCCGTCTCCTTCATCCGTTGAGATTCCCTCCCCCACCATTTATGTAACAGTTCGAAGCTGACTTATCTAGCTTTACGTTATTCCTTGTATCAGGATGAGGATATGCGCAGCCTGTGCGTGACGCGTTCAGATTTTTATGTGAGATCGGTTATTTGGGGATTTGTCATATCATGAATGGATTCAACTCAATGAACTGAAAACAATGTATGTTGTTCACTGACTTGGAAGATTATTGTTGAGAATATATTAAATGATGAAATTATTGATAGGTTGAAAATTCAGATTTCGGAGTTGATAATTAAGCTTTAGCTCAAATTTCTGGGATGTTATTCACTCCTGATTTCATCGACTGTCTCATGAATCGAGCTAATATCAGCCTCATATTTGAGGAGTAGTGTAATGTTGAAAATGTAGTGAATAATTAAATATACCTCAGCAGTGTTTGAGAATATATAGATTAAATTTTCCTTAGCTTAATTTTTAAGCTTTTAGATGTGGCGATGATTTGAGAATGATGACCAAAATAATTAATTAGTAGAATTTGCTTTTGAGGTCTCTCTCTATAATTTGGACATTGTGTCACTGGGAAAACTATTCTATTCTTATGGCCAGTCTTTCTCTCTGTAGTTGATGTTTGCAAAATTGAAAGGTCATCCTTTATGTATAGATACTTGCTATACCTTTTTTTTAAAAAAATTTATTTCTTTTAAAAAACATGTTACACTTATATGGGATATATGTTGGAGATTTATTTGAATGCTAACGGTAAAAATTGAGTCCACTAAGAGAGAGAGAGAGAGATTTGAAGATCATGTCGTTTATAACTTAACTAAGAGTTGCTTTGAGCACAGTGACATTTATGAATTCCCTATTTTAAATGATCGCAGCAAACAAGTAGAATATTCTCATCTTGGAATTTTCATGCATTTCAGATCATGTAGAACAAAGATGAAGATGCATTGATATCTAAGATTCTATAGGTGAAATCAAGAGGGTATGAGAGGTGGGTGTAGGGGTTAATTGAAATGCTGCCCTTATCCTCAACTCGTGACGAGAAAAAGGCTGCAGCAGAATCTTAATGAGGGAGAATCAATGAAAATGGTGACCCACCCTTGCTTTTAATATACCAGTGAGCATCGTACATTTTATCTTCATATTTTACTAGAAATAAACATCTCAATGCCTCTAAAGTTAGTTTGATGGAGATATGTAAGAATCTGTCCGAGTTTCTTCATTTCAGTTTTATATTTTCGCATTTTCCTTTCCTTCCTGGAAGGGGTGGAGGTAGTTGATGTCCTACTAAGGTGTTCTGATCCATATGTTTATGTGGACCAATGAATACTGTGATGGAAATGGACTGGTTAGACTTATTAATCTCCATATCAGCTGCAGACGTAGGATTCACTGTATCATTCAAGTTGCACCCATGTCCAATATGAATTTATGCCCCTTCCCCGTAGATTTGTTCCTTTCCTACTAAGTTCAAGTATGAATTCAATCAGTGTTGTCACTGTTCTGAAATTAAGAGACCAAAATCTAACCCTTCTTTCAAAGGGTCGAGACTTTTCATCCATGATGATTGTATAAAACTTTTATTGTTTTTTTTTCACTTATAATAAATGGAATTCTATTTCCATATCTTGTGCTCGAGATTTAATTACTGCTAGTTATAAAATTATTGATATTCTCGATGGCTGATCCTCTCACCCCAATTGGCTAAATAAAAGTGCTTTCTAGTAATGTTTTTTGTGGGATGTATCTTATTGATTCCAACTACAATATGGTTTTACATAGATTGAAGGACACGTCTTTAGATTTACCATTACACACTAAGTGATGCCATATGGAACTTGTTAGTGAAAAAGAGGGTCACTATCAAGCAAATCATCGTTAAGGGCCATTTTCCTTATCCAAACAACTATCTGAAGGAACTTGCACTTTTCTATCCATTTACTTATGTCTTCCAAATTGTTTCGATTAAACAATTCAATCCACCATCCCTTCACCAACCTTTATAAATACATTCGTTTATGCAAAGTCCCCATATCAAAGCATAAGCAAACATCACAACCTTACTCCCTTTCTTTCAGCTTCTTGTTCCTTGATCTTCTACAAGCCTTTGGCTTTTTTCTTTTCCTCCTGCTTTTGTTAGTATAACTGCAGCCATTTCACTTCTCTTTGGATATTTGGTTATAAAAATCTTTGGAAGGAAGAAGAGTGATTGAATTTTAATGGATAGATTGAGAAATTTGGCATCACAGAAAGCAGTGGTGATTTTTTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTTTTTTATGAGCTTGGTGCGAGCCCTGCAATTCACGAGCTTGACCATGAAGCAAGCGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAGTTTATAGGGTCAGCAAAAGATGTTATTTCTCTCCATGTCAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTGTAATGCTACAAAAAAGCAAAACCCAAAAACCGAATGGCT

mRNA sequence

TTTTTTTCCATTTCGGCTTGCATCATTGATCATAATTTGACATGTTCCAGATCGATCGAATCAATTTCAAGAGTTATTTTCAACTTTTTTTTTTTCTTTCGGCTTGCAATTCTCCTGAACAAAAAACAAGGCGGTGAAAGAGATTGAAATTTTTGGAGCATGAAAAGACATTGCCCCATCTTTGTTCATGGAAACTATTCATTCATTCGCTGAATTTCGATCTCTCAATTATACATTTGCATTATTCAAATGGAATCTCTCAACACAACGAGTGATGTCATGATCCAGCACGAAGAAGATTCCGCGTCACATTAATCCGTATGTGAAATCTCTGTAAGCAATTGCCCTTACATCTTCTCTGTTCTGATGAATTTTCTTCGTTTCTTTTACGGATTTAAGAAACTTAACGAGCTGAAGTTTTCAATTGTTTCAAAGGGGAATTTGTTGATTTCGACGGATGAGGATATGCGCAGCCTGTGCGTGACGCGTTCAGATTTTTATGTGAGATCGGTTATTTGGGGATTTGTCATATCATGAATGGATTCAACTCAATGAACTGAAAACAATATCATGTAGAACAAAGATGAAGATGCATTGATATCTAAGATTCTATAGGTGAAATCAAGAGGGTATGAGAGGTGGGTGTAGGGGTTAATTGAAATGCTGCCCTTATCCTCAACTCGTGACGAGAAAAAGGCTGCAGCAGAATCTTAATGAGGGAGAATCAATGAAAATGGTGACCCACCCTTGCTTTTAATATACCAGTGAGCATCGTACATTTTATCTTCATATTTTACTAGAAATAAACATCTCAATGCCTCTAAAGTTAGTTTGATGGAGATATGTAAGAATCTGTCCGAGTTTCTTCATTTCAGTTTTATATTTTCGCATTTTCCTTTCCTTCCTGGAAGGGGTGGAGGTAGTTGATGTCCTACTAAGGTGTTCTGATCCATATGTTTATGTGGACCAATGAATACTGTGATGGAAATGGACTGGTTAGACTTATTAATCTCCATATCAGCTGCAGACGTAGGATTCACTGTATCATTCAAGTTGCACCCATGTCCAATATGAATTTATGCCCCTTCCCCGTAGATTTGTTCCTTTCCTACTAAGTTCAAGTATGAATTCAATCAGTGTTGTCACTGTTCTGAAATTAAGAGACCAAAATCTAACCCTTCTTTCAAAGGGTCGAGACTTTTCATCCATGATGATTGTATAAAACTTTTATTGTTTTTTTTTCACTTATAATAAATGGAATTCTATTTCCATATCTTGTGCTCGAGATTTAATTACTGCTAGTTATAAAATTATTGATATTCTCGATGGCTGATCCTCTCACCCCAATTGGCTAAATAAAAGTGCTTTCTAGTAATGTTTTTTGTGGGATGTATCTTATTGATTCCAACTACAATATGGTTTTACATAGATTGAAGGACACGTCTTTAGATTTACCATTACACACTAAGTGATGCCATATGGAACTTGTTAGTGAAAAAGAGGGTCACTATCAAGCAAATCATCGTTAAGGGCCATTTTCCTTATCCAAACAACTATCTGAAGGAACTTGCACTTTTCTATCCATTTACTTATGTCTTCCAAATTGTTTCGATTAAACAATTCAATCCACCATCCCTTCACCAACCTTTATAAATACATTCGTTTATGCAAAGTCCCCATATCAAAGCATAAGCAAACATCACAACCTTACTCCCTTTCTTTCAGCTTCTTGTTCCTTGATCTTCTACAAGCCTTTGGCTTTTTTCTTTTCCTCCTGCTTTTGTTAGTATAACTGCAGCCATTTCACTTCTCTTTGGATATTTGGTTATAAAAATCTTTGGAAGGAAGAAGAGTGATTGAATTTTAATGGATAGATTGAGAAATTTGGCATCACAGAAAGCAGTGGTGATTTTTTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTTTTTTATGAGCTTGGTGCGAGCCCTGCAATTCACGAGCTTGACCATGAAGCAAGCGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAGTTTATAGGGTCAGCAAAAGATGTTATTTCTCTCCATGTCAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTGTAATGCTACAAAAAAGCAAAACCCAAAAACCGAATGGCT

Coding sequence (CDS)

ATGGATAGATTGAGAAATTTGGCATCACAGAAAGCAGTGGTGATTTTTTCCAAGAGCTCATGCTACATATGCCATAGCATCCAGACACTTTTTTATGAGCTTGGTGCGAGCCCTGCAATTCACGAGCTTGACCATGAAGCAAGCGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCCTCTGTTCCAGCTGTGTTCATAGGAGGAAAGTTTATAGGGTCAGCAAAAGATGTTATTTCTCTCCATGTCAATGGGGATCTGAAACAAATGCTGATAGATGCGAAGGCCATCTGGTTGTAA

Protein sequence

MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLGCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL

Homology

[Close]

BLAST of Tan0016442 vs. ExPASy Swiss-Prot
Match: Q9LYC6 (Glutaredoxin-C11 OS=Arabidopsis thaliana OX=3702 GN=GRXC11 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.1e-37
Identity = 74/103 (71.84%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           M+R+R+L+S+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  GRE++ ALR LG
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALG 60

Query: 61  -CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
             NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKAIWL
Sbjct: 61  SSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103

[Close]

BLAST of Tan0016442 vs. ExPASy Swiss-Prot
Match: O82254 (Putative glutaredoxin-C12 OS=Arabidopsis thaliana OX=3702 GN=GRXC12 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-33
Identity = 69/103 (66.99%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWAL-RGL 60
           M+R+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  G +++ AL R  
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61  GCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + AIWL
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIWL 103

[Close]

BLAST of Tan0016442 vs. ExPASy Swiss-Prot
Match: Q9LIF1 (Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana OX=3702 GN=GRXS10 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.6e-30
Identity = 60/102 (58.82%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MD +  LASQ+AVVIFSKS+C + H+I+ LFYE G SPAI E+D +  G++I+WAL  LG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+WL
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of Tan0016442 vs. ExPASy Swiss-Prot
Match: O23421 (Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.6e-25
Identity = 54/102 (52.94%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           M+ L+ + S+K+VVIFSK+SC + H+I+TLF +LG +P I+ELD  + G+EI+ AL  LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+WL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Tan0016442 vs. ExPASy Swiss-Prot
Match: O23419 (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana OX=3702 GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-24
Identity = 53/102 (51.96%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MD+L+ + S+K+VVIFSK+SC + H+I+TLF + G +P I+ELD    G+EI+ AL  LG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML    A+WL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Tan0016442 vs. NCBI nr
Match: XP_022954101.1 (glutaredoxin-C11-like [Cucurbita moschata] >XP_022992474.1 glutaredoxin-C11-like isoform X2 [Cucurbita maxima] >XP_023549403.1 glutaredoxin-C11-like [Cucurbita pepo subsp. pepo] >KAG6575856.1 Glutaredoxin-C11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014392.1 Glutaredoxin-C11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.1 bits (531), Expect = 1.7e-50
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEA+GREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Tan0016442 vs. NCBI nr
Match: XP_038876720.1 (glutaredoxin-C11 [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 3.9e-50
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDH+A+GREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Tan0016442 vs. NCBI nr
Match: XP_008451630.1 (PREDICTED: glutaredoxin-C11 [Cucumis melo] >XP_031744239.1 glutaredoxin-C11 [Cucumis sativus] >KAA0068043.1 glutaredoxin-C11-like [Cucumis melo var. makuwa] >TYK18085.1 glutaredoxin-C11-like [Cucumis melo var. makuwa])

HSP 1 Score: 207.6 bits (527), Expect = 5.1e-50
Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+A+GREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Tan0016442 vs. NCBI nr
Match: KAE8646327.1 (hypothetical protein Csa_015602 [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 1.1e-49
Identity = 98/101 (97.03%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+A+GREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 102
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIW 101

[Close]

BLAST of Tan0016442 vs. NCBI nr
Match: XP_022146613.1 (glutaredoxin-C11 [Momordica charantia])

HSP 1 Score: 202.2 bits (513), Expect = 2.1e-48
Identity = 96/102 (94.12%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MD LRNLASQKAVVIFSKSSCYICHS+QTLFYELG SPAIHELDHEA+GREIDWALRGLG
Sbjct: 1   MDTLRNLASQKAVVIFSKSSCYICHSVQTLFYELGXSPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Tan0016442 vs. ExPASy TrEMBL
Match: A0A6J1JXM7 (glutaredoxin-C11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.4e-51
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEA+GREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Tan0016442 vs. ExPASy TrEMBL
Match: A0A6J1GPY2 (glutaredoxin-C11-like OS=Cucurbita moschata OX=3662 GN=LOC111456468 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.4e-51
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEA+GREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Tan0016442 vs. ExPASy TrEMBL
Match: A0A5A7VIX0 (Glutaredoxin-C11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00060 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.4e-50
Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+A+GREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Tan0016442 vs. ExPASy TrEMBL
Match: A0A0A0K7M4 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G394580 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.4e-50
Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+A+GREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Tan0016442 vs. ExPASy TrEMBL
Match: A0A1S3BRC8 (glutaredoxin-C11 OS=Cucumis melo OX=3656 GN=LOC103492861 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.4e-50
Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPA+HELDH+A+GREIDWALRGLG
Sbjct: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAVHELDHDANGREIDWALRGLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL
Sbjct: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 102

[Close]

BLAST of Tan0016442 vs. TAIR 10
Match: AT3G62950.1 (Thioredoxin superfamily protein )

HSP 1 Score: 154.8 bits (390), Expect = 3.6e-38
Identity = 74/103 (71.84%), Postives = 91/103 (88.35%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           M+R+R+L+S+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  GRE++ ALR LG
Sbjct: 1   MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPEGREMERALRALG 60

Query: 61  -CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
             NP+VPAVF+GG++IGSAKD+IS HV+G LKQML DAKAIWL
Sbjct: 61  SSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103

[Close]

BLAST of Tan0016442 vs. TAIR 10
Match: AT2G47870.1 (Thioredoxin superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 1.1e-34
Identity = 69/103 (66.99%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWAL-RGL 60
           M+R+R+LAS+KA VIF+KSSC +CHSI+TLFYELGASPAIHELD +  G +++ AL R  
Sbjct: 1   MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61  GCNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           G NP+VPAVF+GG+++GSAKDVIS HV+G LKQML  + AIWL
Sbjct: 61  GSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIWL 103

[Close]

BLAST of Tan0016442 vs. TAIR 10
Match: AT3G21460.1 (Glutaredoxin family protein )

HSP 1 Score: 131.7 bits (330), Expect = 3.3e-31
Identity = 60/102 (58.82%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MD +  LASQ+AVVIFSKS+C + H+I+ LFYE G SPAI E+D +  G++I+WAL  LG
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VPAVF+GGKF+G+A  V++LH+NG LK +L +A A+WL
Sbjct: 61  CSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of Tan0016442 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 1.9e-26
Identity = 54/102 (52.94%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           M+ L+ + S+K+VVIFSK+SC + H+I+TLF +LG +P I+ELD  + G+EI+ AL  LG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML  A A+WL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Tan0016442 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 7.1e-26
Identity = 53/102 (51.96%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 1   MDRLRNLASQKAVVIFSKSSCYICHSIQTLFYELGASPAIHELDHEASGREIDWALRGLG 60
           MD+L+ + S+K+VVIFSK+SC + H+I+TLF + G +P I+ELD    G+EI+ AL  LG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 61  CNPSVPAVFIGGKFIGSAKDVISLHVNGDLKQMLIDAKAIWL 103
           C+P+VP VFIGG+ +G A  V+SLH+N  L  ML    A+WL
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

The following BLAST results are available for this feature:

BLAST of Tan0016442 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYC6	5.1e-37	71.84	Glutaredoxin-C11 OS=Arabidopsis thaliana OX=3702 GN=GRXC11 PE=3 SV=1	[more]
O82254	1.5e-33	66.99	Putative glutaredoxin-C12 OS=Arabidopsis thaliana OX=3702 GN=GRXC12 PE=3 SV=1	[more]
Q9LIF1	4.6e-30	58.82	Monothiol glutaredoxin-S10 OS=Arabidopsis thaliana OX=3702 GN=GRXS10 PE=3 SV=1	[more]
O23421	2.6e-25	52.94	Monothiol glutaredoxin-S3 OS=Arabidopsis thaliana OX=3702 GN=GRXS3 PE=3 SV=1	[more]
O23419	1.0e-24	51.96	Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana OX=3702 GN=GRXS4 PE=3 SV=1	[more]

BLAST of Tan0016442 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954101.1	1.7e-50	99.02	glutaredoxin-C11-like [Cucurbita moschata] >XP_022992474.1 glutaredoxin-C11-like...	[more]
XP_038876720.1	3.9e-50	98.04	glutaredoxin-C11 [Benincasa hispida]	[more]
XP_008451630.1	5.1e-50	97.06	PREDICTED: glutaredoxin-C11 [Cucumis melo] >XP_031744239.1 glutaredoxin-C11 [Cuc...	[more]
KAE8646327.1	1.1e-49	97.03	hypothetical protein Csa_015602 [Cucumis sativus]	[more]
XP_022146613.1	2.1e-48	94.12	glutaredoxin-C11 [Momordica charantia]	[more]

BLAST of Tan0016442 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JXM7	8.4e-51	99.02	glutaredoxin-C11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=...	[more]
A0A6J1GPY2	8.4e-51	99.02	glutaredoxin-C11-like OS=Cucurbita moschata OX=3662 GN=LOC111456468 PE=3 SV=1	[more]
A0A5A7VIX0	2.4e-50	97.06	Glutaredoxin-C11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A0A0K7M4	2.4e-50	97.06	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G39458...	[more]
A0A1S3BRC8	2.4e-50	97.06	glutaredoxin-C11 OS=Cucumis melo OX=3656 GN=LOC103492861 PE=3 SV=1	[more]

BLAST of Tan0016442 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62950.1	3.6e-38	71.84	Thioredoxin superfamily protein	[more]
AT2G47870.1	1.1e-34	66.99	Thioredoxin superfamily protein	[more]
AT3G21460.1	3.3e-31	58.82	Glutaredoxin family protein	[more]
AT4G15700.1	1.9e-26	52.94	Thioredoxin superfamily protein	[more]
AT4G15680.1	7.1e-26	51.96	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 72..85 score: 31.85 coord: 13..31 score: 35.31 coord: 58..71 score: 34.23
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..101 e-value: 3.4E-25 score: 89.9
None	No IPR available	PANTHER	PTHR10168:SF202	GLUTAREDOXIN-C1 PROTEIN	coord: 1..101
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 1..101 score: 19.634604
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 12..93 e-value: 2.80749E-35 score: 113.789
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 5..102 e-value: 3.7E-38 score: 127.5
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..101
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..75 e-value: 1.2E-9 score: 38.3
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016442.1	Tan0016442.1	mRNA
Tan0016442.2	Tan0016442.2	mRNA
Tan0016442.3	Tan0016442.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0097573	glutathione oxidoreductase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity