Tan0016405 (gene) Snake gourd v1

Overview


Name	Tan0016405
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Carboxypeptidase Y-like
Location	LG01: 7017949 .. 7018284 (+)
RNA-Seq Expression	Tan0016405
Synteny	Tan0016405

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCATCTCACCACCGCCGCCCCATGTTCATCCACAATCCGACGTCGGGGGGCCCCAAATGGTCATCCCACCGCCTCTGCCTCATGTTCGTCTACTATCCGACGTCGCTGGGCCTCAAATGGTGATTCCATCGCCTCCACCCCATATTCGTCTGCAATCGGATGTCGGCGGGCCTCAAATGGTCATTCCATCGCCTCCACCTCACATTCGTCCACAATCGAACGTCAGCGGGCCTCAAATGGTCATCCCACCACCTTCACCACACGTTATTTCACAGTTAGATGTTAATGGCCCTGTAATAGTAATTCCCCCACCTCTTCCAAATCAAGTCTAA

mRNA sequence

ATGGTCATCTCACCACCGCCGCCCCATGTTCATCCACAATCCGACGTCGGGGGGCCCCAAATGGTCATCCCACCGCCTCTGCCTCATGTTCGTCTACTATCCGACGTCGCTGGGCCTCAAATGGTGATTCCATCGCCTCCACCCCATATTCGTCTGCAATCGGATGTCGGCGGGCCTCAAATGGTCATTCCATCGCCTCCACCTCACATTCGTCCACAATCGAACGTCAGCGGGCCTCAAATGGTCATCCCACCACCTTCACCACACGTTATTTCACAGTTAGATGTTAATGGCCCTGTAATAGTAATTCCCCCACCTCTTCCAAATCAAGTCTAA

Coding sequence (CDS)

ATGGTCATCTCACCACCGCCGCCCCATGTTCATCCACAATCCGACGTCGGGGGGCCCCAAATGGTCATCCCACCGCCTCTGCCTCATGTTCGTCTACTATCCGACGTCGCTGGGCCTCAAATGGTGATTCCATCGCCTCCACCCCATATTCGTCTGCAATCGGATGTCGGCGGGCCTCAAATGGTCATTCCATCGCCTCCACCTCACATTCGTCCACAATCGAACGTCAGCGGGCCTCAAATGGTCATCCCACCACCTTCACCACACGTTATTTCACAGTTAGATGTTAATGGCCCTGTAATAGTAATTCCCCCACCTCTTCCAAATCAAGTCTAA

Protein sequence

MVISPPPPHVHPQSDVGGPQMVIPPPLPHVRLLSDVAGPQMVIPSPPPHIRLQSDVGGPQMVIPSPPPHIRPQSNVSGPQMVIPPPSPHVISQLDVNGPVIVIPPPLPNQV

Homology

[Close]

BLAST of Tan0016405 vs. NCBI nr
Match: XP_038880482.1 (leucine-rich repeat extensin-like protein 3 [Benincasa hispida])

HSP 1 Score: 158.7 bits (400), Expect = 2.9e-35
Identity = 83/108 (76.85%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 1   MVISPPPPHVHPQSDVGGPQMVIPPPLPHVRLLSDVAGPQMVIPSPPPHIRLQSDVGGPQ 60
           MVI PPPPHVHPQSD GGPQMVIPPPLPHVR  SDV GPQMVIPSPP HI   SD+GGPQ
Sbjct: 133 MVIPPPPPHVHPQSDAGGPQMVIPPPLPHVRPQSDVGGPQMVIPSPPLHIPPLSDIGGPQ 192

Query: 61  MVIPSPPPHIRPQSNVSGPQMVIPPPSPHVISQLDVNGPVIVIPPPLP 109
           MVIP P P+IRPQS++ GPQMVIPP  PH+  Q DV GP +VIPPPLP
Sbjct: 193 MVIPPPLPYIRPQSDIGGPQMVIPPSPPHIHLQSDVGGPQMVIPPPLP 240

[Close]

BLAST of Tan0016405 vs. NCBI nr
Match: XP_038880481.1 (extensin-like [Benincasa hispida])

HSP 1 Score: 157.9 bits (398), Expect = 5.0e-35
Identity = 80/111 (72.07%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 1   MVISPPPPHVHPQSDVGGPQMVIPPPLPHVRLLSDVAGPQMVIPSPPPHIRLQSDVGGPQ 60
           MVI PPPPHVHP SDVGGPQMVIPPP PHV   SDV GPQMVIP PPPH   Q+D GGPQ
Sbjct: 261 MVIPPPPPHVHPHSDVGGPQMVIPPPPPHVHPQSDVGGPQMVIPPPPPHFHQQTDAGGPQ 320

Query: 61  MVIPSPPPHIRPQSNVSGPQMVIPPPSPHVISQLDVNGPVIVIPPPLPNQV 112
           M IP P PH+RPQS+V GPQMVIPPP PH+  Q DV GP +VIPPP P  +
Sbjct: 321 MAIPLPSPHVRPQSDVGGPQMVIPPPPPHIRPQSDVGGPQMVIPPPPPPHI 371

[Close]

BLAST of Tan0016405 vs. NCBI nr
Match: KAA0055818.1 (zyxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-33
Identity = 80/111 (72.07%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 1   MVISPPPPHVHPQSDVGGPQMVIPPPLPHVRLLSDVAGPQMVIPSPPPHIRLQSDVGGPQ 60
           MVI PPPPH HPQSDVGGPQMVIPPP PH    SDV GPQMVIP PPPH  L SDVGGPQ
Sbjct: 79  MVIPPPPPHKHPQSDVGGPQMVIPPPPPHKLPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 138

Query: 61  MVIPSPPPHIRPQSNVSGPQMVIPPPSPHVISQLDVNGPVIVIPPPLPNQV 112
           MVIP PPPH  PQS+V GPQMVIPPP PH     DV GP +V+PPP P+ +
Sbjct: 139 MVIPPPPPHKFPQSDVGGPQMVIPPPPPHHYLDSDVGGPQMVVPPPPPHHI 189

[Close]

BLAST of Tan0016405 vs. NCBI nr
Match: TYK10069.1 (zyxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 152.1 bits (383), Expect = 2.7e-33
Identity = 80/111 (72.07%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 1   MVISPPPPHVHPQSDVGGPQMVIPPPLPHVRLLSDVAGPQMVIPSPPPHIRLQSDVGGPQ 60
           MVI PPPPH HPQSDVGGPQMVIPPP PH    SDV GPQMVIP PPPH  L SDVGGPQ
Sbjct: 79  MVIPPPPPHKHPQSDVGGPQMVIPPPPPHKLPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 138

Query: 61  MVIPSPPPHIRPQSNVSGPQMVIPPPSPHVISQLDVNGPVIVIPPPLPNQV 112
           MVIP PPPH  PQS+V GPQMVIPPP PH     DV GP +V+PPP P+ +
Sbjct: 139 MVIPPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDVGGPQMVVPPPPPHHI 189

[Close]

BLAST of Tan0016405 vs. NCBI nr
Match: KAA0055816.1 (carboxypeptidase Y-like [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 1.4e-32
Identity = 79/109 (72.48%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 1   MVISPPPPHVHPQSDVGGPQMVIPPPLPHVRLLSDVAGPQMVIPSPPPHIRLQSDVGGPQ 60
           MVI PPPPH  PQSDVGGPQMVIPPP PH  L SDV GPQMVIP PPPH  L SD+GGPQ
Sbjct: 61  MVIPPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPHHHLDSDIGGPQ 120

Query: 61  MVIPSPPPHIRPQSNVSGPQMVIPPPSPHVISQLDVNGPVIVIPPPLPN 110
           MVIP PPPH  PQS++ GPQMVIPPP PH     DV GP +VIPPP P+
Sbjct: 121 MVIPPPPPHKFPQSDIGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPH 169

[Close]

BLAST of Tan0016405 vs. ExPASy TrEMBL
Match: A0A5A7UL62 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002120 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.8e-34
Identity = 80/111 (72.07%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 1   MVISPPPPHVHPQSDVGGPQMVIPPPLPHVRLLSDVAGPQMVIPSPPPHIRLQSDVGGPQ 60
           MVI PPPPH HPQSDVGGPQMVIPPP PH    SDV GPQMVIP PPPH  L SDVGGPQ
Sbjct: 79  MVIPPPPPHKHPQSDVGGPQMVIPPPPPHKLPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 138

Query: 61  MVIPSPPPHIRPQSNVSGPQMVIPPPSPHVISQLDVNGPVIVIPPPLPNQV 112
           MVIP PPPH  PQS+V GPQMVIPPP PH     DV GP +V+PPP P+ +
Sbjct: 139 MVIPPPPPHKFPQSDVGGPQMVIPPPPPHHYLDSDVGGPQMVVPPPPPHHI 189

[Close]

BLAST of Tan0016405 vs. ExPASy TrEMBL
Match: A0A5D3CIK1 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002070 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.3e-33
Identity = 80/111 (72.07%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 1   MVISPPPPHVHPQSDVGGPQMVIPPPLPHVRLLSDVAGPQMVIPSPPPHIRLQSDVGGPQ 60
           MVI PPPPH HPQSDVGGPQMVIPPP PH    SDV GPQMVIP PPPH  L SDVGGPQ
Sbjct: 79  MVIPPPPPHKHPQSDVGGPQMVIPPPPPHKLPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 138

Query: 61  MVIPSPPPHIRPQSNVSGPQMVIPPPSPHVISQLDVNGPVIVIPPPLPNQV 112
           MVIP PPPH  PQS+V GPQMVIPPP PH     DV GP +V+PPP P+ +
Sbjct: 139 MVIPPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDVGGPQMVVPPPPPHHI 189

[Close]

BLAST of Tan0016405 vs. ExPASy TrEMBL
Match: A0A5A7UNF2 (Carboxypeptidase Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002060 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.6e-33
Identity = 79/109 (72.48%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 1   MVISPPPPHVHPQSDVGGPQMVIPPPLPHVRLLSDVAGPQMVIPSPPPHIRLQSDVGGPQ 60
           MVI PPPPH  PQSDVGGPQMVIPPP PH  L SDV GPQMVIP PPPH  L SD+GGPQ
Sbjct: 61  MVIPPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPHHHLDSDIGGPQ 120

Query: 61  MVIPSPPPHIRPQSNVSGPQMVIPPPSPHVISQLDVNGPVIVIPPPLPN 110
           MVIP PPPH  PQS++ GPQMVIPPP PH     DV GP +VIPPP P+
Sbjct: 121 MVIPPPPPHKFPQSDIGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPH 169

[Close]

BLAST of Tan0016405 vs. ExPASy TrEMBL
Match: A0A5D3CDK8 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002010 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.6e-33
Identity = 79/109 (72.48%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 1   MVISPPPPHVHPQSDVGGPQMVIPPPLPHVRLLSDVAGPQMVIPSPPPHIRLQSDVGGPQ 60
           MVI PPPPH  PQSDVGGPQMVIPPP PH  L SDV GPQMVIP PPPH  L SD+GGPQ
Sbjct: 41  MVIPPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPHHHLDSDIGGPQ 100

Query: 61  MVIPSPPPHIRPQSNVSGPQMVIPPPSPHVISQLDVNGPVIVIPPPLPN 110
           MVIP PPPH  PQS++ GPQMVIPPP PH     DV GP +VIPPP P+
Sbjct: 101 MVIPPPPPHKFPQSDIGGPQMVIPPPPPHHHLDSDVGGPQMVIPPPPPH 149

[Close]

BLAST of Tan0016405 vs. ExPASy TrEMBL
Match: A0A5A7VJT8 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00140 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32
Identity = 79/108 (73.15%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 1   MVISPPPPHVHPQSDVGGPQMVIPPPLPHVRLLSDVAGPQMVIPSPPPHIRLQSDVGGPQ 60
           MVI PPPPH HPQ DVGGPQMVIPPP PH    SDV GPQMVIP PPPH  L SDVGGPQ
Sbjct: 99  MVIPPPPPHKHPQFDVGGPQMVIPPPSPHKLPQSDVGGPQMVIPPPPPHHHLDSDVGGPQ 158

Query: 61  MVIPSPPPHIRPQSNVSGPQMVIPPPSPHVISQLDVNGPVIVIPPPLP 109
           MVIP PPPH  PQS+V GPQMVIPPP PH     DV+GP ++IPPP P
Sbjct: 159 MVIPPPPPHKFPQSDVGGPQMVIPPPPPHHHLDSDVDGPQMIIPPPPP 206

The following BLAST results are available for this feature:

BLAST of Tan0016405 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0016405 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880482.1	2.9e-35	76.85	leucine-rich repeat extensin-like protein 3 [Benincasa hispida]	[more]
XP_038880481.1	5.0e-35	72.07	extensin-like [Benincasa hispida]	[more]
KAA0055818.1	1.6e-33	72.07	zyxin-like [Cucumis melo var. makuwa]	[more]
TYK10069.1	2.7e-33	72.07	zyxin-like [Cucumis melo var. makuwa]	[more]
KAA0055816.1	1.4e-32	72.48	carboxypeptidase Y-like [Cucumis melo var. makuwa]	[more]

BLAST of Tan0016405 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UL62	7.8e-34	72.07	Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002120 PE...	[more]
A0A5D3CIK1	1.3e-33	72.07	Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002070 PE=...	[more]
A0A5A7UNF2	6.6e-33	72.48	Carboxypeptidase Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CDK8	6.6e-33	72.48	Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002010 PE=...	[more]
A0A5A7VJT8	1.1e-32	73.15	Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00140 PE=4 ...	[more]

BLAST of Tan0016405 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016405.1	Tan0016405.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005992	trehalose biosynthetic process
molecular_function	GO:0004805	trehalose-phosphatase activity