Tan0016342 (gene) Snake gourd v1

Overview


Name	Tan0016342
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	heterogeneous nuclear ribonucleoprotein Q
Location	LG05: 893462 .. 900926 (-)
RNA-Seq Expression	Tan0016342
Synteny	Tan0016342

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGATGGGGTTAATGGCCCATCCCTCAATTGCAAGGAGCCCCAAAATCTGTCTTGAAGGAGGAGTCTAGGGTTCGTTCATCGGGTAAAAGCAGGGGGGTCCAAATATTTTCTACGATTCTTCATTTGAAGCTCTCAGTTTCGGCAGAGTTCTCTAAGTAGTTTGGACAAATTCTCACAGAAAGCATCCTTGGTACTCTTTTGCTCCTTATCTCTTCGTCGATGTCTTTCTTCAATCTAATCTTCTTGTCCACTTTTCTCTTGCGCTACTGTTTTAATTTTTGTTCGTTTTCCTTTGCGACTCTCTGAATCTTTATGCGGTTTTTGTCGTATGAAGTTGAAACCTGCAGCTTTCTCTTCTATTCCTTGCATTTTATGATACCTAGACGGGTAGAGTATAATGGGAATACCAATGCAAGTGGTGTAGAATCTGGGGATAAAATCTGAAGGCGAATGGTTTTTTTTTTTGTTTGTTTTTTTAATCAAAGAATTCTGAAACTGAAATCTGTTATTTGTTATTATACAAATGTTTTTCCCGTACTCTTAGGAAAAGTGAAAGGAATTCAGCTGAGGAATCTAACTGTTTAATGTCTGTAACTTTGAAAATTGAACCGTTTAAGGAGAGAGATATGAATAAAAAAATAGAAGTTGCGTGACTCCATGAGGTTTGATGTAATACTGGAAGGTAGATGTTAGGCGAAGGAAACATATTACATTCAAATTATTAGTGAATTTGTTGGAATGGATGACGAACGTGATTAAGACACTGGTGCACCAAAATACTGTATTTTGACGTTTGTAGGTTTTGACTCTTTTCGCATTTTGGGTAATTCTTGGTCTTCAAACGATGATATTTTGATTTTTGTAACTAATTGATTCCAAACTTGTTTAACTGGTAATGGGTGGAAAGTCTGAATTCCATGTAGTTTAAACCATAAATAAATATATCAAGCAAATTACTTGGCCATGGGTGAACGTTTTTCTTCCATTTTTTTCTCCCTGTGACTGATAACACAGGGAAAGTATAATTCCTATTTTTCTCCCATATCAATGACTGAAAAAGGAACTATACCCATGGATGGGCAGATATCTTATTTGTATCCATGGAACTCAAATTTCACCATGGTTTACAATGCTACTCTGGAAAGAGGTAGTATTGTGATGAAATGACATAACTATGTGTCACAAAGTTCTTATAACCAACCCCCCCCTCTCCTCATTATATTCGTTAAAACGTCTATGTGGATAAATATTTTAAAACATGTCTGGTGCCCAAATTTGATTGATGAAACACAACACATCCTTTTACGAGATGTGGGGAGGGGGGGGGGGTATTTATAGAGAAAAAAGGGAGTGTTTGTGTATGTAGTATGCCTATACACACCATGAGAACAATCTCTTTAATTTTTGAGAATCAACTGGGAGGGGAATTTCCGTTGTGAGTAGATGCCTCTACTTGTCAACACTAAAAAGCTTTAGGATTGTTTCATTTGAGATTATTACTGATTTGTTGTCGATGCGTGCTTCCTTTCCCTTTGTTCCTATCTTTTGACTAAATCAACCTACTCAGTTTAAGTAAGATGATTAGTTTTTAGTAAGTTTATGTGTTGCTTGTGAGATAAATCTGAATGAGGAGTCTTTGTATATGGTGTTATTTACTGATTGTTTGTATATGGTGTTATTTACTGATTGTTCGTATATGGTGTTATTTACTGATTGTTTGTATATGGTGTTATTTACTGATTGTTATGATCGTCTGGGTGGTGATTCCCCCTTCTGAGTGCAATTTCTTTATTCTTTTTGCAGGGGGTACACAGATTGGTATGTTGTTTGGAACTGGTATATGTTTTTCTGAGATGGACAAAATTGATTCTCCATTTGTAGCAGCAGTCTCATTCCTTTTTTGTCTAAACCTATTATATCAAAATGGTCCCATTAGATCTCTTATGCTACTTTGTGTGGCATTGTTATGTCCTTGCATTAAAGTAAAGCATTCAATTGTCTCCATAATATATTCTGCTGTCATTAACATTAGTTTCGTGAGATATTCAGAAAATGTTACCCCTTGAAAAAAGATGTAGAAATCTAATTTGTCAAAAGATTTTTTTTGGTATGGCAATCATTCTGATTTCAAGTCATTCATATCTTTATGTTGTTTTGCACCACCTCCGTAATTCTCATTGTAGTCACTGAGAGACTCATTAACCGGTCTCTTTTATGCTACTTGTGTTATAAACATTATCCCTCTAGAAAAAAAGTCTTTCACATTTCAATCCCCTTGAGTCTATTCTCATGAAACTTTTCATTTCAGCTTCATATTTTTCTACTCCATTTGGCCTTTCTTTTTGTTTCCTCCTCTCAGTAACTTTTTATATGTCCCCATGAATTCTTCTGGCCTCTGTGCCTTCTTCACAGTTACCTTGCAAGCTTGTTTAATTAGTCAAATAAGATGCCAAGGGGAAAGGGAAATGCTTCATCTACTGCTAGGCCAGTTGAACCTGAAAAGCAGAGTGAATCTGAAAAGCCAGTTGACTCGGATGAGAGGGTAGATCTTGATGTTGATAATGATCCTGAGGAGGTAATGGAAGAAGATGTTGAGTACGAAGAAGTAGAAGAGGAGGAGGAGGTGGAAGAAATAGAAGAAGTTGAAGAGGAGGAGGAAGAAGAAGAGGAGGAGGAAGAGGAGGTTGAGGAAGAAGATGTTGAAGAAGAGGATGATGGAAATAATGAAAACGGAATTAATGCCCAAAATGAGATTGGTAATGATGAGGATGAAAAGAAAAAACATGCTGATCTTCTTGCCCTACCTCCTCATGGTTCTGAAGTATATATTGGTGGTATTCCTCAAGATTCTTCTGAAGAGGATTTGAGGAGTTTTTGTGTATCCATAGGAGATGTTACAGAGGTACGCCCAATTATATTTATTTCATATCCAGATTATGTGCTTTTCACTGGGACTAATAGTATTCTGCTACAAGCAGGTTCGCATTATGAGAAGTAAAGAGTCAAATGAGAATAAGGGCTTTGCATTTGTTACCTATAAAAGTGTGGAGTTGGCTTCTAAAGCAATCGATGAGCTGAATAACACTGAATTCAAGGTTTATCTTTCACTTCTGTTTGTGGTCCATACATCAATAAGTTGATACATCAAGTGCAAACTTGGAAGCTAATGTTTAAAATTTGCAAAAACTTAGATTTTTTGGGATCTTCCCTGCTTTTTCTTCCCAATGTCCTTTCTCAGTATTTTTAACACCTCTCTCTCTCTCTGCTTGTGCATGTGACATAGGGGAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCACCGTTTGTTCATTGGAAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTTAGGAAGGTTGTGACAGATATTGGACCTGGAGTTACTGCTGTGGAACTTGTAAAGGTTAGCATGGCAGAATTTTCATCTTGTATCTTAACATGACTTCTTTGCTACATCTGTACTATGCTGTGTTCGATCCACAATTTTTGTACTCTTCTCTTTATGAAGACTTTATAAGTTTGTGCAAAATAACCTGATGTGCTAGTTTCTTGGATTTGATGTTACACAATTTTCGGTTGCAGGATATGAAGAATACTAGCAACAACAGGGGTTTTGCTTTTATTGACTACTATAATCATGCATGTGCCGAGTACTCGAGGCAGAAGATGATGAACCCGAAATTTAAGCTAGATGATAATGCTCCAACTGTTAGCTGGGCGGACCCTAAAAATGCCGATTCATCTGCTGCTTCACAGGTCTTGCTCAATTGCTTTTGGATTTCTCACATTACTTGTCCATTCAACATCCATGTTTCTTTTTTTATTCATATTATAATAACTAAGTATTAAATGGCTTTTATTAAAATATCTATTAAACTCAGATTGTTAAATAGCTTATGAGTTAACTGTACACTGATTTTTTTTATTTATATAATAGTAGCTAATGAATTTCGTGTAATTATTTACAAGTTCCTAATGAGTATGAACTATCAAATATATATTGTTCAAGATTTTATTATTTGTGACTTTATTTTATCTGTGTGCTTCATAAATTTGTCAACAAACAAAAGTCAAATGGTCAAATTGATAATTATTATTGAGCTTTTTTAATCTAACAATTAATTTGTTACGTTCATCGAGACAGTTGTCTCAAGTTTTATGATGATAAACATAATGAGATGACTAATGTAAAATTTGTGTTATATGAGATATGTCATGACTAGTCCTTTGCACTGTATAGTTGGTTTTTGGATCCCATTGCACTGTATAGCTGGTTTTTGGATCTATGGCCTTAATTGTTTATTGACTGAAGATGAGACATATTAAGTTTTGTTATATTTGATTTCAGAATTATCTTTGGGTGTTCTGTTTTCAATAATGTGTCTATCTTTTTTGGTTAATACAGGTGAAGGCAGTTTATGTGAAGAATTTACCAAAGAATGTAACGCAGGAGCAGTTGAAAAGGCTGTTTGATCATCATGGAAAAATTACAAAAGTGGTTTTGCCTCCTGCAAAGTCTGGACAAGAGAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGGTCCAGTGCTATGAAGGCTTTAAAAAATACAGAAAAATATGAATTGGATGGTGACCATTTCTCCCGAAGCTCTTCTAAAATTTTTCATTTTACTGACCACCAAATGGGGCTGGTCTTTGATATCCGTTTGTTCATGCTTATATATCAGGTCAAGTTTTGGAGTGTTCTCTTGCAAAGCCACAGGCAGACCAGAAGTCTGGTGGATCGAATAGCCAAAAGTCTGGATTGCTTCCTAACTATCCACCTCGCGTTGGATATGGCTTTGTTGGGGGTGCTTATGGTTCTGTAAATGCAGGATATGGTGCTTCTGGGTTTGCTCAGGTAAAATGTCTGTGCATTTGTTTATCTCCTTCATGGGTTCTAAACTTGGTACCCGTCTTGATAAGGTTAAACTAGCCATCTCCTCTTGAAACCTTTGTCTAGATAAGTGACTAAGAGCAGTGTTTTTAAAGGCGCACTAAGGCAGCCTAGGCGCAAGACGCACCATTAGGCGCAGACTTTTTTATCTAAGGCGCACTATATATATACAAAATATATATATATATATATATATATATATATGTATACATACACAATAAGAAAAAACTGTTCATGGGATGAAATTAAGTTTTAACCAAGGAAAATAAGTAAAAGAAATAAGGTTCAACTTTCAAGTATTAATGTTTGAACATAGAGACAATAGATACTCTATTAAAAAACATGAAACAATACAACACTAATAAATTATAAACACTACAAGATCAAAAACCTTAAATATCAATCTCTTCTTCACTAAATAGATCTTCTTCTTCAACCCCATTCTCTTCATCATTGGGCATATAGCCATCTGTATCTTCTTCATCAGTCTCATTCTCATAGTCATCCAAGTTAACAGGTGGGGGCATGGGTTGTGGATCTCGTGACAATGGTTGTGTGGACGTGGAGGATGAACATGAAGCATTATTCTTGGTTCTTGATTTAGCTCTAGAATAGTAGGCAAGTTCCTCCATTGATTTTAACGATGTTAAACCCTAAATGAAATGGGTTTATTGTGTTTTGTGTTTTTTTTTTAAATATATATTTAAAATACATTTAATGAAAGAAAAAAAAAACTGAAGAAGCCCCAGAGGCACGCAAGCGCGCCTCGAGGGCTTCATGGAAGGCGCGCGCCTTCTTACATGCGACTCGCCTCTTCGAGGTGAGGCGCTGAAGTTGCGCCTCGGAGGGCTTTTTAAAACACTGGCTAAGAGTATAGTTATAATTGGAGCTTAGAAGGATTCAAATGGTTTTGTGAATGTGGTACTTGCCAACCTAAGGATACCATACCAGTATACCACAGCACTAGTTATCTAGTTCACTGGGAGTTTGATGTTCTCTAAATGATTCAACCTGAACTTTTTGTGGCTTCCATTTAATCCATTGGCTTTGGGGAGTGATTATTTTTCTCCTCTTCAGAAATTTAGGAAAGATACCTCAATTCGTATTTGTGCATGTTTATCTTTTGTTGTGTTTCAGTATATGATTACTGTGCTGCCTTGGACGTATGATTTGTGGTTCATAGTTTTTTATAAGGAAAAAAATCTAATTGAATTGCACTTGAGTTGCAGCCGTTGATTTATGGAAGAGGACCAACTCCAGCTGGTATGGCAATGATGCCAATGTTGCTACCTGATGGACGGATTGGCTATGTCTTGTAAGCTCGTGCATCTTTTCTTTTACCAATATTATACCTCAATAATAATCTGATTGTAGTGGACAATTCTTTTATGTTTTTTTACTCCTAAGATTTTCTTGAAGTAACCTTGAAATGGAATGATATAAATCTAAACATGTTTAGAATAGATTCTTTTTTGATAGGTTTGAAAAAACAGTGTCTCGTTGATAGGTTCCATTAGAAGTCCTATCTTAAAATGTTTGCCTTTATTTAGAAGCTCCCGCCCATATCATTTCTCTAGCGTGGCTACTCTTAGGTTAATGTGGAAAAGCATGGAAAGTCGGGGCTGTCTTGGCTTTATGACTTTTCTTTGTTTATTCAGTTTTACAATCCACCTCACTAGTATTGATGGGTATTTGCTGAAATGATGTTTGGAAACTAGTTGGACGTACAGATGAAGCTATTTATTGTGAACTCTCTACCCTGTGTTTTGGTCCTGATACTTGGCTAATTATTCCTGGACAAAGTAATTATTAGCCGTAATAGCTTTCAGATAGATTTAGACGTCAGTGAACTTTGCCTAGTTCGAAAAGTCTTCCTGATCAAAATAGCAACAGTTGTGAAATATAATTCATCTGCGGGTAAAATTGTTTCTAATACTTTAGCTTCACCTCTGATAGCTTATGTCAAACCCCCATATTTCTTTGCAGGCAACAACCAGGGTCACAAATGCTAACCCCTCCACCACATCCAAGAAGTGGCGGCGGCGGCGGCGGGAGCAGTGGCGGAAGTGGCAGCAAGAATGGCGGCAGTTCTAGTCGGGGGAGACATACACATGACAGCGGCCATGGTCGCAGGTATCGCCCATATTAAATATTCCTGCCGTTGGATGTTCCGCTCGTGAACCAACAGGAAAGTTTCTGCCGGAAGTGCCTCTCCCTCCGCCTAACATCGTGATCGTAGATTCTTCAGTATTGATAAAGTGGAGATAGCTAATTTATGGGCTTTGTAATGTGTTTGTTAGTTCCTATCAATATTACCTAGGTTACAGTTCAAATTAATTAATGTGTTTTGCCCTCGGTTTTGTTCCTTGTCCTTCTCACTTTTAGACCAGAAATACGTTTTAGCAAATCATCTGTGATAAAAATGGTGATCTCCAATTTGAGAATGTGTGTGGCTTGCGTGGTAACAACTCCATTGGCGCATAAAAAAGTTACCTTAGACCGAAGGTTAAATTATATGTTTAG

mRNA sequence

CTGATGGGGTTAATGGCCCATCCCTCAATTGCAAGGAGCCCCAAAATCTGTCTTGAAGGAGGAGTCTAGGGTTCGTTCATCGGGTAAAAGCAGGGGGGTCCAAATATTTTCTACGATTCTTCATTTGAAGCTCTCAGTTTCGGCAGAGTTCTCTAAGTAGTTTGGACAAATTCTCACAGAAAGCATCCTTGGGGGTACACAGATTGTTACCTTGCAAGCTTGTTTAATTAGTCAAATAAGATGCCAAGGGGAAAGGGAAATGCTTCATCTACTGCTAGGCCAGTTGAACCTGAAAAGCAGAGTGAATCTGAAAAGCCAGTTGACTCGGATGAGAGGGTAGATCTTGATGTTGATAATGATCCTGAGGAGGTAATGGAAGAAGATGTTGAGTACGAAGAAGTAGAAGAGGAGGAGGAGGTGGAAGAAATAGAAGAAGTTGAAGAGGAGGAGGAAGAAGAAGAGGAGGAGGAAGAGGAGGTTGAGGAAGAAGATGTTGAAGAAGAGGATGATGGAAATAATGAAAACGGAATTAATGCCCAAAATGAGATTGGTAATGATGAGGATGAAAAGAAAAAACATGCTGATCTTCTTGCCCTACCTCCTCATGGTTCTGAAGTATATATTGGTGGTATTCCTCAAGATTCTTCTGAAGAGGATTTGAGGAGTTTTTGTGTATCCATAGGAGATGTTACAGAGGTTCGCATTATGAGAAGTAAAGAGTCAAATGAGAATAAGGGCTTTGCATTTGTTACCTATAAAAGTGTGGAGTTGGCTTCTAAAGCAATCGATGAGCTGAATAACACTGAATTCAAGGGGAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCACCGTTTGTTCATTGGAAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTTAGGAAGGTTGTGACAGATATTGGACCTGGAGTTACTGCTGTGGAACTTGTAAAGGATATGAAGAATACTAGCAACAACAGGGGTTTTGCTTTTATTGACTACTATAATCATGCATGTGCCGAGTACTCGAGGCAGAAGATGATGAACCCGAAATTTAAGCTAGATGATAATGCTCCAACTGTTAGCTGGGCGGACCCTAAAAATGCCGATTCATCTGCTGCTTCACAGGTGAAGGCAGTTTATGTGAAGAATTTACCAAAGAATGTAACGCAGGAGCAGTTGAAAAGGCTGTTTGATCATCATGGAAAAATTACAAAAGTGGTTTTGCCTCCTGCAAAGTCTGGACAAGAGAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGGTCCAGTGCTATGAAGGCTTTAAAAAATACAGAAAAATATGAATTGGATGGTCAAGTTTTGGAGTGTTCTCTTGCAAAGCCACAGGCAGACCAGAAGTCTGGTGGATCGAATAGCCAAAAGTCTGGATTGCTTCCTAACTATCCACCTCGCGTTGGATATGGCTTTGTTGGGGGTGCTTATGGTTCTGTAAATGCAGGATATGGTGCTTCTGGGTTTGCTCAGCCGTTGATTTATGGAAGAGGACCAACTCCAGCTGGTATGGCAATGATGCCAATGTTGCTACCTGATGGACGGATTGGCTATGTCTTGCAACAACCAGGGTCACAAATGCTAACCCCTCCACCACATCCAAGAAGTGGCGGCGGCGGCGGCGGGAGCAGTGGCGGAAGTGGCAGCAAGAATGGCGGCAGTTCTAGTCGGGGGAGACATACACATGACAGCGGCCATGGTCGCAGGTATCGCCCATATTAAATATTCCTGCCGTTGGATGTTCCGCTCGTGAACCAACAGGAAAGTTTCTGCCGGAAGTGCCTCTCCCTCCGCCTAACATCGTGATCGTAGATTCTTCAGTATTGATAAAGTGGAGATAGCTAATTTATGGGCTTTGTAATGTGTTTGTTAGTTCCTATCAATATTACCTAGGTTACAGTTCAAATTAATTAATGTGTTTTGCCCTCGGTTTTGTTCCTTGTCCTTCTCACTTTTAGACCAGAAATACGTTTTAGCAAATCATCTGTGATAAAAATGGTGATCTCCAATTTGAGAATGTGTGTGGCTTGCGTGGTAACAACTCCATTGGCGCATAAAAAAGTTACCTTAGACCGAAGGTTAAATTATATGTTTAG

Coding sequence (CDS)

ATGCCAAGGGGAAAGGGAAATGCTTCATCTACTGCTAGGCCAGTTGAACCTGAAAAGCAGAGTGAATCTGAAAAGCCAGTTGACTCGGATGAGAGGGTAGATCTTGATGTTGATAATGATCCTGAGGAGGTAATGGAAGAAGATGTTGAGTACGAAGAAGTAGAAGAGGAGGAGGAGGTGGAAGAAATAGAAGAAGTTGAAGAGGAGGAGGAAGAAGAAGAGGAGGAGGAAGAGGAGGTTGAGGAAGAAGATGTTGAAGAAGAGGATGATGGAAATAATGAAAACGGAATTAATGCCCAAAATGAGATTGGTAATGATGAGGATGAAAAGAAAAAACATGCTGATCTTCTTGCCCTACCTCCTCATGGTTCTGAAGTATATATTGGTGGTATTCCTCAAGATTCTTCTGAAGAGGATTTGAGGAGTTTTTGTGTATCCATAGGAGATGTTACAGAGGTTCGCATTATGAGAAGTAAAGAGTCAAATGAGAATAAGGGCTTTGCATTTGTTACCTATAAAAGTGTGGAGTTGGCTTCTAAAGCAATCGATGAGCTGAATAACACTGAATTCAAGGGGAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCACCGTTTGTTCATTGGAAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTTAGGAAGGTTGTGACAGATATTGGACCTGGAGTTACTGCTGTGGAACTTGTAAAGGATATGAAGAATACTAGCAACAACAGGGGTTTTGCTTTTATTGACTACTATAATCATGCATGTGCCGAGTACTCGAGGCAGAAGATGATGAACCCGAAATTTAAGCTAGATGATAATGCTCCAACTGTTAGCTGGGCGGACCCTAAAAATGCCGATTCATCTGCTGCTTCACAGGTGAAGGCAGTTTATGTGAAGAATTTACCAAAGAATGTAACGCAGGAGCAGTTGAAAAGGCTGTTTGATCATCATGGAAAAATTACAAAAGTGGTTTTGCCTCCTGCAAAGTCTGGACAAGAGAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGGTCCAGTGCTATGAAGGCTTTAAAAAATACAGAAAAATATGAATTGGATGGTCAAGTTTTGGAGTGTTCTCTTGCAAAGCCACAGGCAGACCAGAAGTCTGGTGGATCGAATAGCCAAAAGTCTGGATTGCTTCCTAACTATCCACCTCGCGTTGGATATGGCTTTGTTGGGGGTGCTTATGGTTCTGTAAATGCAGGATATGGTGCTTCTGGGTTTGCTCAGCCGTTGATTTATGGAAGAGGACCAACTCCAGCTGGTATGGCAATGATGCCAATGTTGCTACCTGATGGACGGATTGGCTATGTCTTGCAACAACCAGGGTCACAAATGCTAACCCCTCCACCACATCCAAGAAGTGGCGGCGGCGGCGGCGGGAGCAGTGGCGGAAGTGGCAGCAAGAATGGCGGCAGTTCTAGTCGGGGGAGACATACACATGACAGCGGCCATGGTCGCAGGTATCGCCCATATTAA

Protein sequence

MPRGKGNASSTARPVEPEKQSESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEEEEEEVEEEDVEEEDDGNNENGINAQNEIGNDEDEKKKHADLLALPPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGSVNAGYGASGFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGSSGGSGSKNGGSSSRGRHTHDSGHGRRYRPY

Homology

[Close]

BLAST of Tan0016342 vs. ExPASy Swiss-Prot
Match: Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.6e-115
Identity = 257/502 (51.20%), Postives = 353/502 (70.32%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEEEEEEVEE----- 87
           D+D+RVD +  +  E  ME++VE E+VEE EE EE ++ +++   +  EE EVE+     
Sbjct: 6   DNDDRVDFEEGSYSE--MEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTK 65

Query: 88  ----EDVEEEDDGNNENGINAQNEIGN-------DEDEKKKHADLLALPPHGSEVYIGGI 147
               EDV+EE   +++N I+ +    +       D+++++K++ LL+LPPHGSEV+IGG+
Sbjct: 66  GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGL 125

Query: 148 PQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELASKAIDELNNTEFK 207
           P+D  EEDLR  C  IG++ EVR+M+ ++S ++KG+AFV +K+ ++A KAI+EL++ EFK
Sbjct: 126 PRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFK 185

Query: 208 GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKDMKNTSNNRGFAF 267
           GK I+CS S+ K+RLFIGN+P++W E++ RKV+ D+GPGV  +EL+KD  NT+ NRGFAF
Sbjct: 186 GKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAF 245

Query: 268 IDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKNV 327
           + YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+N 
Sbjct: 246 VLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENT 305

Query: 328 TQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVL 387
           + EQLK LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ L
Sbjct: 306 STEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPL 365

Query: 388 ECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGSVNAGYGASG-FAQPL 447
           E  LAKPQA++K   S S   G  P   P V     GF    YG++ AG G +G F+QP+
Sbjct: 366 EVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPM 425

Query: 448 IYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM-LTPPPHPRSGGGGGGSSGGSGSKNG 506
           IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP  PR      GSSGGSG  N 
Sbjct: 426 IYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRDNS 485

[Close]

BLAST of Tan0016342 vs. ExPASy Swiss-Prot
Match: O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 8.1e-35
Identity = 125/416 (30.05%), Postives = 198/416 (47.60%), Query Frame = 0


Query: 120 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELAS 179
           P  G+E+++G IP+D  E++L       G + ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 180 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVK 239
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +  + +  G+T V L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 240 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 299
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 300 KAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 359
           K ++V+NL   VT+E L++ F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 360 NTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 419
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 398 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 457

Query: 420 --RVGYGFVGGAYGSVN----AGYG----ASGFAQPLIYGRGPTPAGMAMMPMLLPDGRI 479
             R GYG+    YG  +     GY       G+  P  YG      G          G  
Sbjct: 458 GGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR------GRGGR 517

Query: 480 GYVLQQPGSQMLTPPPHPRSG----GGGGGSSGGSGSKNGGSSSRGRHTHDSGHGR 501
           G     P       PP  R+G    GG G + G  G++ G    RGR    +  GR
Sbjct: 518 GARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVRGARGGR 557

[Close]

BLAST of Tan0016342 vs. ExPASy Swiss-Prot
Match: Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-34
Identity = 125/416 (30.05%), Postives = 198/416 (47.60%), Query Frame = 0


Query: 120 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELAS 179
           P  G+E+++G IP+D  E++L       G + ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 180 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVK 239
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +  + +  G+T V L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 240 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 299
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 300 KAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 359
           K ++V+NL   VT+E L++ F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 360 NTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 419
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 398 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 457

Query: 420 --RVGYGFVGGAYGSVN----AGYG----ASGFAQPLIYGRGPTPAGMAMMPMLLPDGRI 479
             R GYG+    YG  +     GY       G+  P  YG      G          G  
Sbjct: 458 GGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR------GRGGR 517

Query: 480 GYVLQQPGSQMLTPPPHPRSG----GGGGGSSGGSGSKNGGSSSRGRHTHDSGHGR 501
           G     P       PP  R+G    GG G + G  G++ G    RGR    +  GR
Sbjct: 518 GARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVRGARGGR 557

[Close]

BLAST of Tan0016342 vs. ExPASy Swiss-Prot
Match: Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-34
Identity = 125/416 (30.05%), Postives = 198/416 (47.60%), Query Frame = 0


Query: 120 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELAS 179
           P  G+E+++G IP+D  E++L       G + ++R+M    +  N+G+AFVT+ + E A 
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 180 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVK 239
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +  + +  G+T V L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 240 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 299
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 300 KAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 359
           K ++V+NL   VT+E L++ F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307

Query: 360 NTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 419
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 308 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 367

Query: 420 --RVGYGFVGGAYGSVN----AGYG----ASGFAQPLIYGRGPTPAGMAMMPMLLPDGRI 479
             R GYG+    YG  +     GY       G+  P  YG      G          G  
Sbjct: 368 GGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR------GRGGR 427

Query: 480 GYVLQQPGSQMLTPPPHPRSG----GGGGGSSGGSGSKNGGSSSRGRHTHDSGHGR 501
           G     P       PP  R+G    GG G + G  G++ G    RGR    +  GR
Sbjct: 428 GARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVRGARGGR 467

[Close]

BLAST of Tan0016342 vs. ExPASy Swiss-Prot
Match: O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 6.9e-34
Identity = 123/435 (28.28%), Postives = 199/435 (45.75%), Query Frame = 0


Query: 120 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELAS 179
           P  G+EV++G IP+D  E++L       G + ++R+M    S +N+G+AF+T+   E A 
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 180 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVK 239
           +A+   ++ E + GK +    S A +RLF+G++P++  +E++ +  + +  G+  V L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 240 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 299
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP +  D    ++V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 300 KAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 359
           K ++V+NL   VT+E L++ F   GK+ +V        ++     FVHF +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400

Query: 360 NTEKYELDGQVLECSLAKP---QADQKSGGSNSQKSGLLPNY----PPRVGYGFVGGAYG 419
                E++G+ +E  LAKP   +  ++     + +S    +Y    PPR+     G   G
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 420 SVNAGYG-----------------------ASGFAQP--------LIYGRG--------- 479
               GYG                         G+  P         + GRG         
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520

Query: 480 PTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGSSGGSGSKNGGSSSRG 506
           P P G    P   P GR GY      SQ   P   PR   GG G         G   SRG
Sbjct: 521 PPPRGRGAPP---PRGRAGY------SQRGAPLGPPRGSRGGRGGPAQQQRGRGSRGSRG 578

[Close]

BLAST of Tan0016342 vs. NCBI nr
Match: XP_038902706.1 (heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902707.1 heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902708.1 heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida])

HSP 1 Score: 881.7 bits (2277), Expect = 3.0e-252
Identity = 483/513 (94.15%), Postives = 493/513 (96.10%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQSESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQ+E EKP DSDERVDL+VDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLEVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEEEEEEVEEEDVEE-EDDGNNENGINAQNEIGNDEDEKKKHADLLAL 120
           EEIEEVEEEEEEEEEEEE  EEEDVEE EDDG NENGINAQNEI NDEDEKKKHA+LLAL
Sbjct: 61  EEIEEVEEEEEEEEEEEEG-EEEDVEEVEDDGTNENGINAQNEISNDEDEKKKHAELLAL 120

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELAS 180
           PPHGSEVY+GGIPQDSSEEDLRSFC SIG+VTEVRIMRSKESNENKGFAFVTY+SVELAS
Sbjct: 121 PPHGSEVYVGGIPQDSSEEDLRSFCESIGEVTEVRIMRSKESNENKGFAFVTYRSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKD 240
           KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKD
Sbjct: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNH+CAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHSCAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGSVNAGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYG VNAGYGAS
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGGVNAGYGAS 420

Query: 421 GFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRS-GGGGGGSSGG 480
           GF QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRS GGGGGG  GG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGGGGGG 480

Query: 481 SGSKNGGSSSRGRHTHD------SGHGRRYRPY 506
           SGSK+GGSSSRGRH+HD       GHGRRYRPY
Sbjct: 481 SGSKSGGSSSRGRHSHDGGHGGHGGHGRRYRPY 512

[Close]

BLAST of Tan0016342 vs. NCBI nr
Match: XP_023533658.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023533659.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023533660.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 880.9 bits (2275), Expect = 5.1e-252
Identity = 481/508 (94.69%), Postives = 493/508 (97.05%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQSESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQ+ESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEEEEEEVEEEDVE-EEDDGNNENGINAQNEIGNDEDEKKKHADLLAL 120
           EEIEEVEEEEEEEE EEEEVEEEDVE  ED GNN+NGINAQNE G DEDEKKKH +LLAL
Sbjct: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELAS 180
           PPHGSEVYIGGIPQD+SEEDLRSFCVSIG+VTEVRIM+SK+SNENKGFAFVTYKSVELAS
Sbjct: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKD 240
           KAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDLRKVV DIGPGVTAVELVKD
Sbjct: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGSVNAGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYG+VN GYGAS
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420

Query: 421 GFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGG-GGGSSGG 480
           GF QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM+TPPPHPRSGGG G GS GG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480

Query: 481 SGSKNGGSSSR-GRHTHDSGHGRRYRPY 506
           SGSK+GGSSSR GRHTHDSGHGRRYRPY
Sbjct: 481 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 508

[Close]

BLAST of Tan0016342 vs. NCBI nr
Match: XP_022153053.1 (heterogeneous nuclear ribonucleoprotein Q [Momordica charantia] >XP_022153054.1 heterogeneous nuclear ribonucleoprotein Q [Momordica charantia] >XP_022153055.1 heterogeneous nuclear ribonucleoprotein Q [Momordica charantia])

HSP 1 Score: 880.2 bits (2273), Expect = 8.7e-252
Identity = 481/512 (93.95%), Postives = 493/512 (96.29%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQSESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQ+ESEKPVDSDERVDLDVDNDPEE MEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEETMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEEEEEEV-----EEEDVEE-EDDGNNENGINAQNEIGNDEDEKKKHA 120
           EEIEEVEEEEEEEEEEEEE      EEEDVEE ED GNN+NG +AQNEIGNDEDEKK+HA
Sbjct: 61  EEIEEVEEEEEEEEEEEEEEEEEEGEEEDVEEVEDGGNNDNGNDAQNEIGNDEDEKKRHA 120

Query: 121 DLLALPPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKS 180
           +LLALPPHGSEVYIGGIPQDSSEEDLRSFC SIG+VTEVRIMRSK+SNENKGF+FVTYKS
Sbjct: 121 ELLALPPHGSEVYIGGIPQDSSEEDLRSFCASIGEVTEVRIMRSKDSNENKGFSFVTYKS 180

Query: 181 VELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAV 240
           VELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAV
Sbjct: 181 VELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAV 240

Query: 241 ELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAA 300
           ELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAA
Sbjct: 241 ELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAA 300

Query: 301 SQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMK 360
           SQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHF+ERSSAMK
Sbjct: 301 SQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFAERSSAMK 360

Query: 361 ALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAY-GSVN 420
           ALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYG+VGGAY G+VN
Sbjct: 361 ALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGYVGGAYGGAVN 420

Query: 421 AGYGASGFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGG 480
           AGYGAS F+QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGG   
Sbjct: 421 AGYGASSFSQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGG--- 480

Query: 481 GSSGGSGSKNGGSSSRGRHTHDSGHGRRYRPY 506
              GGSGSKNGGSSSRGRHTHDSGHGRRYRPY
Sbjct: 481 ---GGSGSKNGGSSSRGRHTHDSGHGRRYRPY 506

[Close]

BLAST of Tan0016342 vs. NCBI nr
Match: XP_022957931.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022957932.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_022957933.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata])

HSP 1 Score: 878.6 bits (2269), Expect = 2.5e-251
Identity = 480/508 (94.49%), Postives = 492/508 (96.85%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQSESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQ+ESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEEEEEEVEEEDVE-EEDDGNNENGINAQNEIGNDEDEKKKHADLLAL 120
           EEIEEVEEEEEEEE EEEEVEEEDVE  ED GNN+NGINAQNE G DEDEKKKH +LLAL
Sbjct: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELAS 180
           PPHGSEVYIGGIPQD+SEEDLRSFCVSIG+VTEVRIM+SK+SNENKGFAFVTYKSVELAS
Sbjct: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKD 240
           KAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDLRKVV DIGPGVTAVELVKD
Sbjct: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPK VTQEQLK+LFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGSVNAGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYG+VN GYGAS
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420

Query: 421 GFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGG-GGGSSGG 480
           GF QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM+TPPPHPRSGGG G GS GG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480

Query: 481 SGSKNGGSSSR-GRHTHDSGHGRRYRPY 506
           SGSK+GGSSSR GRHTHDSGHGRRYRPY
Sbjct: 481 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 508

[Close]

BLAST of Tan0016342 vs. NCBI nr
Match: XP_008449579.1 (PREDICTED: nucleolin [Cucumis melo] >XP_008449580.1 PREDICTED: nucleolin [Cucumis melo])

HSP 1 Score: 876.3 bits (2263), Expect = 1.3e-250
Identity = 478/517 (92.46%), Postives = 492/517 (95.16%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQSESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQ+E EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEEEEEEVEEEDVEE-EDDGNNENGINAQNEIGNDEDEKKKHADLLAL 120
           EEIEEVEEEEEEEEEEEE  +EEDVEE EDDG NENGIN QNE  NDEDEKKKHA+LLAL
Sbjct: 61  EEIEEVEEEEEEEEEEEEG-DEEDVEEVEDDGTNENGINVQNETINDEDEKKKHAELLAL 120

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELAS 180
           PPHGSEVY+GGIPQDSSE+DLR FC SIG+VTEVR+MRSKESNENKGFAFVT++SVELAS
Sbjct: 121 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKD 240
           KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDL+KVVT+IGPGVTAVELVKD
Sbjct: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGSVNAGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYG+VNAGYGAS
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGAS 420

Query: 421 GFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGSSGGS 480
           GF QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGS GGS
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGSGGGS 480

Query: 481 GSKNGGSSSRGRHTHDS-----------GHGRRYRPY 506
           GSKN GSSSRGRH+HDS           GHGRRYRPY
Sbjct: 481 GSKNSGSSSRGRHSHDSGHGGGHGGGHGGHGRRYRPY 516

[Close]

BLAST of Tan0016342 vs. ExPASy TrEMBL
Match: A0A6J1DHV9 (heterogeneous nuclear ribonucleoprotein Q OS=Momordica charantia OX=3673 GN=LOC111020649 PE=4 SV=1)

HSP 1 Score: 880.2 bits (2273), Expect = 4.2e-252
Identity = 481/512 (93.95%), Postives = 493/512 (96.29%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQSESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQ+ESEKPVDSDERVDLDVDNDPEE MEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEETMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEEEEEEV-----EEEDVEE-EDDGNNENGINAQNEIGNDEDEKKKHA 120
           EEIEEVEEEEEEEEEEEEE      EEEDVEE ED GNN+NG +AQNEIGNDEDEKK+HA
Sbjct: 61  EEIEEVEEEEEEEEEEEEEEEEEEGEEEDVEEVEDGGNNDNGNDAQNEIGNDEDEKKRHA 120

Query: 121 DLLALPPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKS 180
           +LLALPPHGSEVYIGGIPQDSSEEDLRSFC SIG+VTEVRIMRSK+SNENKGF+FVTYKS
Sbjct: 121 ELLALPPHGSEVYIGGIPQDSSEEDLRSFCASIGEVTEVRIMRSKDSNENKGFSFVTYKS 180

Query: 181 VELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAV 240
           VELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAV
Sbjct: 181 VELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAV 240

Query: 241 ELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAA 300
           ELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAA
Sbjct: 241 ELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAA 300

Query: 301 SQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMK 360
           SQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHF+ERSSAMK
Sbjct: 301 SQVKAVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFAERSSAMK 360

Query: 361 ALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAY-GSVN 420
           ALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYG+VGGAY G+VN
Sbjct: 361 ALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGYVGGAYGGAVN 420

Query: 421 AGYGASGFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGG 480
           AGYGAS F+QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGG   
Sbjct: 421 AGYGASSFSQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGG--- 480

Query: 481 GSSGGSGSKNGGSSSRGRHTHDSGHGRRYRPY 506
              GGSGSKNGGSSSRGRHTHDSGHGRRYRPY
Sbjct: 481 ---GGSGSKNGGSSSRGRHTHDSGHGRRYRPY 506

[Close]

BLAST of Tan0016342 vs. ExPASy TrEMBL
Match: A0A6J1H0I9 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=LOC111459318 PE=4 SV=1)

HSP 1 Score: 878.6 bits (2269), Expect = 1.2e-251
Identity = 480/508 (94.49%), Postives = 492/508 (96.85%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQSESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQ+ESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEEEEEEVEEEDVE-EEDDGNNENGINAQNEIGNDEDEKKKHADLLAL 120
           EEIEEVEEEEEEEE EEEEVEEEDVE  ED GNN+NGINAQNE G DEDEKKKH +LLAL
Sbjct: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELAS 180
           PPHGSEVYIGGIPQD+SEEDLRSFCVSIG+VTEVRIM+SK+SNENKGFAFVTYKSVELAS
Sbjct: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKD 240
           KAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDLRKVV DIGPGVTAVELVKD
Sbjct: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPK VTQEQLK+LFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGSVNAGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYG+VN GYGAS
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420

Query: 421 GFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGG-GGGSSGG 480
           GF QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM+TPPPHPRSGGG G GS GG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480

Query: 481 SGSKNGGSSSR-GRHTHDSGHGRRYRPY 506
           SGSK+GGSSSR GRHTHDSGHGRRYRPY
Sbjct: 481 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 508

[Close]

BLAST of Tan0016342 vs. ExPASy TrEMBL
Match: A0A1S3BMC2 (nucleolin OS=Cucumis melo OX=3656 GN=LOC103491420 PE=4 SV=1)

HSP 1 Score: 876.3 bits (2263), Expect = 6.1e-251
Identity = 478/517 (92.46%), Postives = 492/517 (95.16%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQSESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQ+E EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEEEEEEVEEEDVEE-EDDGNNENGINAQNEIGNDEDEKKKHADLLAL 120
           EEIEEVEEEEEEEEEEEE  +EEDVEE EDDG NENGIN QNE  NDEDEKKKHA+LLAL
Sbjct: 61  EEIEEVEEEEEEEEEEEEG-DEEDVEEVEDDGTNENGINVQNETINDEDEKKKHAELLAL 120

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELAS 180
           PPHGSEVY+GGIPQDSSE+DLR FC SIG+VTEVR+MRSKESNENKGFAFVT++SVELAS
Sbjct: 121 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKD 240
           KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDL+KVVT+IGPGVTAVELVKD
Sbjct: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGSVNAGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYG+VNAGYGAS
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGAS 420

Query: 421 GFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGSSGGS 480
           GF QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGS GGS
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGSGGGS 480

Query: 481 GSKNGGSSSRGRHTHDS-----------GHGRRYRPY 506
           GSKN GSSSRGRH+HDS           GHGRRYRPY
Sbjct: 481 GSKNSGSSSRGRHSHDSGHGGGHGGGHGGHGRRYRPY 516

[Close]

BLAST of Tan0016342 vs. ExPASy TrEMBL
Match: A0A0A0KI54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425690 PE=4 SV=1)

HSP 1 Score: 869.8 bits (2246), Expect = 5.7e-249
Identity = 475/514 (92.41%), Postives = 492/514 (95.72%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQSESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQ+E EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEEEEEEVEEEDVEE-EDDGNNENGINAQNEIGNDEDEKKKHADLLAL 120
           EEIEEVEEEEEEEE+EEE  +EEDVEE EDDG N+NGIN+QNE  NDEDE KKHA+LLAL
Sbjct: 61  EEIEEVEEEEEEEEDEEEG-DEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLAL 120

Query: 121 PPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELAS 180
           PPHGSEVY+GGIPQDSSE+DLR FC SIG+VTEVR+MRSKESNENKGFAFVT++SVELAS
Sbjct: 121 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKD 240
           KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDL+KVVT+IGPGVTAVELVKD
Sbjct: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGSVNAGYGAS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYG+VNAGYG S
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGS 420

Query: 421 GFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGG-GGSSGG 480
           GF QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGG GGS GG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGG 480

Query: 481 SGSKNGGSSSRGRHTHDS-------GHGRRYRPY 506
           SGSKNGGSSSRGRH+HDS       GHGRRYRPY
Sbjct: 481 SGSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 513

[Close]

BLAST of Tan0016342 vs. ExPASy TrEMBL
Match: A0A6J1K6U6 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LOC111490724 PE=4 SV=1)

HSP 1 Score: 869.4 bits (2245), Expect = 7.4e-249
Identity = 478/508 (94.09%), Postives = 491/508 (96.65%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQSESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGK NASSTARPVEPEK++ESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKENASSTARPVEPEKKNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEE-EEEEEVEEEDVE-EEDDGNNENGINAQNEIGNDEDEKKKHADLLA 120
           EEIEEVEEEEEEEE EEEEEVEEEDVE  ED GNN+NGINAQNE   DEDEKKKH +LLA
Sbjct: 61  EEIEEVEEEEEEEEVEEEEEVEEEDVEGVEDVGNNDNGINAQNENSIDEDEKKKHDELLA 120

Query: 121 LPPHGSEVYIGGIPQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELA 180
           LPPHGSEVYIGGIPQD+SEEDLRSFCVSIG+VTEVRIM+SK+SNENKGFAFVTYKSVELA
Sbjct: 121 LPPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELA 180

Query: 181 SKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVK 240
           SKAID LNN EFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDLRKVV DIGPGVTAVELVK
Sbjct: 181 SKAIDGLNNMEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVK 240

Query: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVK 300
           DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVK
Sbjct: 241 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVK 300

Query: 301 AVYVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN 360
           AVYVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN
Sbjct: 301 AVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKN 360

Query: 361 TEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGSVNAGYGA 420
           TEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYG+VNAGYGA
Sbjct: 361 TEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGA 420

Query: 421 SGFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGSSGG 480
           SGF QPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM+TPPPHPRS GGG GS GG
Sbjct: 421 SGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRS-GGGSGSGGG 480

Query: 481 SGSKNGGSSSR-GRHTHDSGHGRRYRPY 506
           SGSK+GGSSSR GRHTHDSGHGRRYRPY
Sbjct: 481 SGSKSGGSSSRGGRHTHDSGHGRRYRPY 507

[Close]

BLAST of Tan0016342 vs. TAIR 10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 508.4 bits (1308), Expect = 6.4e-144
Identity = 292/492 (59.35%), Postives = 370/492 (75.20%), Query Frame = 0


Query: 21  SESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEEEEEEV 80
           SE+   ++S+ERVDLD DNDPEE++EE+VEYEEVEE    EEIEE+EEE EEE E EEE 
Sbjct: 9   SEAHDSMESEERVDLDGDNDPEEILEEEVEYEEVEE----EEIEEIEEEIEEEVEVEEEE 68

Query: 81  EEEDVEEEDDGNNENGINAQNEIGNDEDEKKKHADLLALPPHGSEVYIGGIPQDSSEEDL 140
           EEED    +                +E+EKK+H +LLALPPHGSEVY+GGIP D++E DL
Sbjct: 69  EEEDAVATE----------------EEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDL 128

Query: 141 RSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELASKAIDELNNTEFKGKKIKCSSS 200
           + FC SIG+VTEVRIMR K+S + KG+AFVT++S +LA++AID LNNT+F+GK+IKCS++
Sbjct: 129 KGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTT 188

Query: 201 QAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACA 260
           QAKHRLF+GNVPR+W E D++K    IGPGV  VEL K+ +N   NRGFAFI+YYNHACA
Sbjct: 189 QAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACA 248

Query: 261 EYSRQKMMNPKFKLDDNAPTVSWADPKN--ADSSAASQVKAVYVKNLPKNVTQEQLKRLF 320
           EYS+QKM NP FKLDDNAPTVSWA+ ++     S+ASQVKA+Y+KNLP+++TQE+LK LF
Sbjct: 249 EYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALF 308

Query: 321 DHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVLECSLAKPQA 380
           +HHGKI KVV+PPAK G+E +R GFVH++ER+S M+ALKNTE+YE+DG +L+C+LAKPQA
Sbjct: 309 EHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQA 368

Query: 381 DQKSGGS---NSQKSGLLPNYPPRVGYGFVGGAYGSVNAGYGASGFAQPLIYGRGPTPAG 440
           DQK+  +   N QKS L PNYPP + YG     +G++  G+GAS ++QPL++  G    G
Sbjct: 369 DQKTNTNTVQNVQKSQLQPNYPPLLSYGMAPSPFGAL-GGFGASAYSQPLMHAGGHAAGG 428

Query: 441 MAMMPMLLPDGRIGYVLQQPG-SQMLTPPP-HPRSGGGGGGSSGGSGSKNGGSSSRGRHT 500
           M+MMP++LPDGRIGYVLQQPG + M  PPP H     GG GSS  SGSK    + RGR  
Sbjct: 429 MSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGR-- 471

Query: 501 HDSGHGRRYRPY 506
                  RY PY
Sbjct: 489 ------SRYNPY 471

[Close]

BLAST of Tan0016342 vs. TAIR 10
Match: AT3G52660.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 508.4 bits (1308), Expect = 6.4e-144
Identity = 292/492 (59.35%), Postives = 370/492 (75.20%), Query Frame = 0


Query: 21  SESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEEEEEEV 80
           SE+   ++S+ERVDLD DNDPEE++EE+VEYEEVEE    EEIEE+EEE EEE E EEE 
Sbjct: 9   SEAHDSMESEERVDLDGDNDPEEILEEEVEYEEVEE----EEIEEIEEEIEEEVEVEEEE 68

Query: 81  EEEDVEEEDDGNNENGINAQNEIGNDEDEKKKHADLLALPPHGSEVYIGGIPQDSSEEDL 140
           EEED    +                +E+EKK+H +LLALPPHGSEVY+GGIP D++E DL
Sbjct: 69  EEEDAVATE----------------EEEEKKRHVELLALPPHGSEVYLGGIPTDATEGDL 128

Query: 141 RSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELASKAIDELNNTEFKGKKIKCSSS 200
           + FC SIG+VTEVRIMR K+S + KG+AFVT++S +LA++AID LNNT+F+GK+IKCS++
Sbjct: 129 KGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTT 188

Query: 201 QAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACA 260
           QAKHRLF+GNVPR+W E D++K    IGPGV  VEL K+ +N   NRGFAFI+YYNHACA
Sbjct: 189 QAKHRLFLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACA 248

Query: 261 EYSRQKMMNPKFKLDDNAPTVSWADPKN--ADSSAASQVKAVYVKNLPKNVTQEQLKRLF 320
           EYS+QKM NP FKLDDNAPTVSWA+ ++     S+ASQVKA+Y+KNLP+++TQE+LK LF
Sbjct: 249 EYSKQKMSNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALF 308

Query: 321 DHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVLECSLAKPQA 380
           +HHGKI KVV+PPAK G+E +R GFVH++ER+S M+ALKNTE+YE+DG +L+C+LAKPQA
Sbjct: 309 EHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQA 368

Query: 381 DQKSGGS---NSQKSGLLPNYPPRVGYGFVGGAYGSVNAGYGASGFAQPLIYGRGPTPAG 440
           DQK+  +   N QKS L PNYPP + YG     +G++  G+GAS ++QPL++  G    G
Sbjct: 369 DQKTNTNTVQNVQKSQLQPNYPPLLSYGMAPSPFGAL-GGFGASAYSQPLMHAGGHAAGG 428

Query: 441 MAMMPMLLPDGRIGYVLQQPG-SQMLTPPP-HPRSGGGGGGSSGGSGSKNGGSSSRGRHT 500
           M+MMP++LPDGRIGYVLQQPG + M  PPP H     GG GSS  SGSK    + RGR  
Sbjct: 429 MSMMPIMLPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGR-- 471

Query: 501 HDSGHGRRYRPY 506
                  RY PY
Sbjct: 489 ------SRYNPY 471

[Close]

BLAST of Tan0016342 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 417.9 bits (1073), Expect = 1.1e-116
Identity = 257/502 (51.20%), Postives = 353/502 (70.32%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEEEEEEVEE----- 87
           D+D+RVD +  +  E  ME++VE E+VEE EE EE ++ +++   +  EE EVE+     
Sbjct: 6   DNDDRVDFEEGSYSE--MEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTK 65

Query: 88  ----EDVEEEDDGNNENGINAQNEIGN-------DEDEKKKHADLLALPPHGSEVYIGGI 147
               EDV+EE   +++N I+ +    +       D+++++K++ LL+LPPHGSEV+IGG+
Sbjct: 66  GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGL 125

Query: 148 PQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELASKAIDELNNTEFK 207
           P+D  EEDLR  C  IG++ EVR+M+ ++S ++KG+AFV +K+ ++A KAI+EL++ EFK
Sbjct: 126 PRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFK 185

Query: 208 GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKDMKNTSNNRGFAF 267
           GK I+CS S+ K+RLFIGN+P++W E++ RKV+ D+GPGV  +EL+KD  NT+ NRGFAF
Sbjct: 186 GKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAF 245

Query: 268 IDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKNV 327
           + YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+N 
Sbjct: 246 VLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENT 305

Query: 328 TQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVL 387
           + EQLK LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ L
Sbjct: 306 STEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPL 365

Query: 388 ECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGSVNAGYGASG-FAQPL 447
           E  LAKPQA++K   S S   G  P   P V     GF    YG++ AG G +G F+QP+
Sbjct: 366 EVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPM 425

Query: 448 IYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM-LTPPPHPRSGGGGGGSSGGSGSKNG 506
           IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP  PR      GSSGGSG  N 
Sbjct: 426 IYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRDNS 485

[Close]

BLAST of Tan0016342 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 417.9 bits (1073), Expect = 1.1e-116
Identity = 257/502 (51.20%), Postives = 353/502 (70.32%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEEEEEEVEE----- 87
           D+D+RVD +  +  E  ME++VE E+VEE EE EE ++ +++   +  EE EVE+     
Sbjct: 6   DNDDRVDFEEGSYSE--MEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTK 65

Query: 88  ----EDVEEEDDGNNENGINAQNEIGN-------DEDEKKKHADLLALPPHGSEVYIGGI 147
               EDV+EE   +++N I+ +    +       D+++++K++ LL+LPPHGSEV+IGG+
Sbjct: 66  GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGL 125

Query: 148 PQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELASKAIDELNNTEFK 207
           P+D  EEDLR  C  IG++ EVR+M+ ++S ++KG+AFV +K+ ++A KAI+EL++ EFK
Sbjct: 126 PRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFK 185

Query: 208 GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKDMKNTSNNRGFAF 267
           GK I+CS S+ K+RLFIGN+P++W E++ RKV+ D+GPGV  +EL+KD  NT+ NRGFAF
Sbjct: 186 GKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAF 245

Query: 268 IDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKNV 327
           + YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+N 
Sbjct: 246 VLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENT 305

Query: 328 TQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVL 387
           + EQLK LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ L
Sbjct: 306 STEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPL 365

Query: 388 ECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGSVNAGYGASG-FAQPL 447
           E  LAKPQA++K   S S   G  P   P V     GF    YG++ AG G +G F+QP+
Sbjct: 366 EVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPM 425

Query: 448 IYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM-LTPPPHPRSGGGGGGSSGGSGSKNG 506
           IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP  PR      GSSGGSG  N 
Sbjct: 426 IYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRDNS 485

[Close]

BLAST of Tan0016342 vs. TAIR 10
Match: AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 401.4 bits (1030), Expect = 1.1e-111
Identity = 251/502 (50.00%), Postives = 345/502 (68.73%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEEEEEEVEE----- 87
           D+D+RVD +  +  E  ME++VE E+VEE EE EE ++ +++   +  EE EVE+     
Sbjct: 6   DNDDRVDFEEGSYSE--MEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTK 65

Query: 88  ----EDVEEEDDGNNENGINAQNEIGN-------DEDEKKKHADLLALPPHGSEVYIGGI 147
               EDV+EE   +++N I+ +    +       D+++++K++ LL+LPPHGSEV+IGG+
Sbjct: 66  GGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDREKYSHLLSLPPHGSEVFIGGL 125

Query: 148 PQDSSEEDLRSFCVSIGDVTEVRIMRSKESNENKGFAFVTYKSVELASKAIDELNNTEFK 207
           P+D  EEDLR  C  IG++ EVR+M+ ++S ++KG+AFV +K+ ++A KAI+EL++ EFK
Sbjct: 126 PRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFK 185

Query: 208 GKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKDMKNTSNNRGFAF 267
                  S    +RLFIGN+P++W E++ RKV+ D+GPGV  +EL+KD  NT+ NRGFAF
Sbjct: 186 ASSTANCSLSLSNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAF 245

Query: 268 IDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKAVYVKNLPKNV 327
           + YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA+YVKN+P+N 
Sbjct: 246 VLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENT 305

Query: 328 TQEQLKRLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVL 387
           + EQLK LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+TE+YE++GQ L
Sbjct: 306 STEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDTERYEVNGQPL 365

Query: 388 ECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGSVNAGYGASG-FAQPL 447
           E  LAKPQA++K   S S   G  P   P V     GF    YG++ AG G +G F+QP+
Sbjct: 366 EVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGIAGSFSQPM 425

Query: 448 IYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM-LTPPPHPRSGGGGGGSSGGSGSKNG 506
           IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP  PR      GSSGGSG  N 
Sbjct: 426 IYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNGSSGGSGRDNS 485

The following BLAST results are available for this feature:

BLAST of Tan0016342 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASP6	1.6e-115	51.20	Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF...	[more]
O60506	8.1e-35	30.05	Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=...	[more]
Q7TMK9	1.1e-34	30.05	Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE...	[more]
Q7TP47	1.1e-34	30.05	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr...	[more]
O43390	6.9e-34	28.28	Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1...	[more]

BLAST of Tan0016342 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902706.1	3.0e-252	94.15	heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902707.1 he...	[more]
XP_023533658.1	5.1e-252	94.69	heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_...	[more]
XP_022153053.1	8.7e-252	93.95	heterogeneous nuclear ribonucleoprotein Q [Momordica charantia] >XP_022153054.1 ...	[more]
XP_022957931.1	2.5e-251	94.49	heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita moschata] >XP_02295793...	[more]
XP_008449579.1	1.3e-250	92.46	PREDICTED: nucleolin [Cucumis melo] >XP_008449580.1 PREDICTED: nucleolin [Cucumi...	[more]

BLAST of Tan0016342 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHV9	4.2e-252	93.95	heterogeneous nuclear ribonucleoprotein Q OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1H0I9	1.2e-251	94.49	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A1S3BMC2	6.1e-251	92.46	nucleolin OS=Cucumis melo OX=3656 GN=LOC103491420 PE=4 SV=1	[more]
A0A0A0KI54	5.7e-249	92.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425690 PE=4 SV=1	[more]
A0A6J1K6U6	7.4e-249	94.09	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Tan0016342 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52660.1	6.4e-144	59.35	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52660.2	6.4e-144	59.35	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.1	1.1e-116	51.20	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.2	1.1e-116	51.20	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.4	1.1e-111	50.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 46..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 488..505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 454..505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..111
None	No IPR available	PANTHER	PTHR10352:SF41	RNA RECOGNITION MOTIF	coord: 1..476
None	No IPR available	PANTHER	PTHR10352	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G	coord: 1..476
None	No IPR available	CDD	cd00590	RRM_SF	coord: 126..198 e-value: 8.50463E-22 score: 86.9753
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 299..372 e-value: 1.4 score: 12.7 coord: 125..198 e-value: 3.4E-4 score: 29.9
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 205..282 e-value: 1.3E-10 score: 51.2 coord: 125..198 e-value: 1.4E-23 score: 94.4 coord: 299..372 e-value: 2.1E-15 score: 67.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 206..269 e-value: 2.0E-9 score: 37.2 coord: 126..196 e-value: 5.4E-19 score: 67.8 coord: 300..369 e-value: 2.5E-15 score: 56.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 124..202 score: 18.222727
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 204..286 score: 11.844008
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 298..376 score: 15.118645
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 287..417 e-value: 1.0E-21 score: 79.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 205..285 e-value: 5.5E-21 score: 76.4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 42..204 e-value: 3.6E-29 score: 103.7
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 121..290
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 292..403

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0016342.1	Tan0016342.1	mRNA
Tan0016342.2	Tan0016342.2	mRNA
Tan0016342.3	Tan0016342.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding