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Tan0016239 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAGCTTGAGGCATATAGTGTTTTCTCCTCAATTGTTGTTGAAGTGGCCAAAAGAAGCTTCATTTTGCTTATGGTTACTGCATCCTGAGCCAAGTAGTCGACCTAAGCTAAGTGAGTTATTGCAAAGCGAATTTCTCAATGAACCAAGAGATGACCTTGAAGAACATGAAGCAACAATCGAGCTTAGGAAAAGAATTGAAGAGCAGGAGTTACTACTAGAATTCCTTCTTCTTATGCAACAAAGAAAGCAAGAAGCTGCTCATAAGTTGCAAGAAAATATTTCATTTCTGTGCAGTGATATTGAACAAGATATGAGGTACAAAACTAATTTCAAGAAAAAGAGTAGGTCATGTCCAGATCTAGAGAAGGGCAATCATTTTCCATTAAATCTCCCTTCAATGACTCATGTCGAAAATACTGATTCTGCTGGCTTGGGATCAAGGAAACGATTTAGGCCAGGAATTTTGATCCACGATTTAGAAGCATGTGGTGATAATCTTGATGTTTGTGAGAAGTCAAGTTCAACCAATGAAAATTAACAAGGTGTACTTTGTAAGAGTTCTTGATTGATGGAAAACTTCAAGAAATTGGAGTTAGCCTATTTTTTTATGAGAGGTAGAGTAAACAAGCCATCAGGGAGGCAGTTTGCTAAGTTTTTTTAATATGACAAACTCTTAAGTTTTTTTTAACAGTTAAAATGACACTTGGAATTCTTTTTTGCCATTTTTTTTTGTTGTTTCGTAGGATCAAAGAGGCAAAGTAGACACTTTTGGATCAAGCTATCCTAAGGCCAGGACGAATTGACAGGAAGATTGAATTCCCAAATCCCAACGAGGATGTGAGTACCACTTTTTAGTATATACTTTTGTTATTTGAAGTATATCGTAGGAATACAATGAATTTTTCTTCATTTAACTTTGTGGTTTCTTTTGAAGTACTAATGGTCCAAAAGGAATTATAAGTTTGTTTGCAATAGGAAGATGAAAAGCCACCTATCTTGTTGGTTTGGTTATGCGTTAATATGCATTTGAGATTATTTAAAGCTACCCACATTTTTCTCTTCTAATCTACGTGCCTTTCTTTACCCCCGGGTAAGACTCTCAATTTATTAGTCGTTAGGAGTGCTATCAATCATGGTTGCTCTTACTATATTGATATACTGACATTCAGTTCATATGAAATGCAGTCCCAGTTTGATATCTTGAAAATACATTCACGGAAAATGAATTTGATGCGTGGGATTGATTTGAAGAAAATTGCAGAGAAAATGAATGGATCTGGTGCAGAGCTCAAGGTATATATGTTGTGCTCAATGTTGATGTTTTGTACATATCTTTTGATAATGACTAGATTGATAATAATCTGGAGTGCTCATGCATATCATTATTCTACATCTACTGGTATTAGCATTATGAGTGTGTTTGCTCTAGCTTTTAAGAGTAGCACTTTGAAACATTTTATCTACAAACTCTCAGGAAAAAGAAACACCAATAAGCCTGTTTAGTACGATTAGCTAACCTTGTGGTGGCCAAAGAATTAAACGCCTCATGCTACCTTGAAAAAGGCTCTTGGATCTAATGCTTCTCTCGACATTCACCTGTATATGTTAACACATTTGTCTTTGCATGTATTAAGAAACTGTTCTTTCAATATATTGCTAGGTTTATTTACAAGATAGCATTGGAACAAATGTAATCACTAGTTGTGTGTGTACACTGATTAATTCTTGCTGGCATATTGTGTGTTTTAATGCAGGCCGTCTACACAGAAGCTGGGATGTTGAAAAAATTGCTCAATTGGAGGAGTCTTTGAAAAGGAAAAAAAGCAGGTATAATACGACCTGTAATTCATACAATTATCACTAAGACCTTCCCTCTTCTATGCTAATGGGACACTTTTACACATCGATCTGGAACAAAGGATGATACAACTTTCAGCCTTTTGCGGAAGACTCTTGGTTCATTTCTAGAAACTGGTTCAGATGAGGACTTCCCAGCTGACGATTGA ATGTCTAGCTTGAGGCATATAGTGTTTTCTCCTCAATTGTTGTTGAAGTGGCCAAAAGAAGCTTCATTTTGCTTATGGTTACTGCATCCTGAGCCAAGTAGTCGACCTAAGCTAAGTGAGTTATTGCAAAGCGAATTTCTCAATGAACCAAGAGATGACCTTGAAGAACATGAAGCAACAATCGAGCTTAGGAAAAGAATTGAAGAGCAGGAGTTACTACTAGAATTCCTTCTTCTTATGCAACAAAGAAAGCAAGAAGCTGCTCATAAGTTGCAAGAAAATATTTCATTTCTGTGCAGTGATATTGAACAAGATATGAGGTACAAAACTAATTTCAAGAAAAAGAGTAGGTCATGTCCAGATCTAGAGAAGGGCAATCATTTTCCATTAAATCTCCCTTCAATGACTCATGTCGAAAATACTGATTCTGCTGGCTTGGGATCAAGGAAACGATTTAGGCCAGGAATTTTGATCCACGATTTAGAAGCATGTGGTGATAATCTTGATTCCCAGTTTGATATCTTGAAAATACATTCACGGAAAATGAATTTGATGCGTGGGATTGATTTGAAGAAAATTGCAGAGAAAATGAATGGATCTGGTGCAGAGCTCAAGGATGATACAACTTTCAGCCTTTTGCGGAAGACTCTTGGTTCATTTCTAGAAACTGGTTCAGATGAGGACTTCCCAGCTGACGATTGA ATGTCTAGCTTGAGGCATATAGTGTTTTCTCCTCAATTGTTGTTGAAGTGGCCAAAAGAAGCTTCATTTTGCTTATGGTTACTGCATCCTGAGCCAAGTAGTCGACCTAAGCTAAGTGAGTTATTGCAAAGCGAATTTCTCAATGAACCAAGAGATGACCTTGAAGAACATGAAGCAACAATCGAGCTTAGGAAAAGAATTGAAGAGCAGGAGTTACTACTAGAATTCCTTCTTCTTATGCAACAAAGAAAGCAAGAAGCTGCTCATAAGTTGCAAGAAAATATTTCATTTCTGTGCAGTGATATTGAACAAGATATGAGGTACAAAACTAATTTCAAGAAAAAGAGTAGGTCATGTCCAGATCTAGAGAAGGGCAATCATTTTCCATTAAATCTCCCTTCAATGACTCATGTCGAAAATACTGATTCTGCTGGCTTGGGATCAAGGAAACGATTTAGGCCAGGAATTTTGATCCACGATTTAGAAGCATGTGGTGATAATCTTGATTCCCAGTTTGATATCTTGAAAATACATTCACGGAAAATGAATTTGATGCGTGGGATTGATTTGAAGAAAATTGCAGAGAAAATGAATGGATCTGGTGCAGAGCTCAAGGATGATACAACTTTCAGCCTTTTGCGGAAGACTCTTGGTTCATTTCTAGAAACTGGTTCAGATGAGGACTTCCCAGCTGACGATTGA MSSLRHIVFSPQLLLKWPKEASFCLWLLHPEPSSRPKLSELLQSEFLNEPRDDLEEHEATIELRKRIEEQELLLEFLLLMQQRKQEAAHKLQENISFLCSDIEQDMRYKTNFKKKSRSCPDLEKGNHFPLNLPSMTHVENTDSAGLGSRKRFRPGILIHDLEACGDNLDSQFDILKIHSRKMNLMRGIDLKKIAEKMNGSGAELKDDTTFSLLRKTLGSFLETGSDEDFPADD Homology
BLAST of Tan0016239 vs. ExPASy Swiss-Prot
Match: Q9LJR3 (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.1e-42 Identity = 98/159 (61.64%), Postives = 118/159 (74.21%), Query Frame = 0
BLAST of Tan0016239 vs. ExPASy Swiss-Prot
Match: Q94BM7 (Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 6.2e-38 Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0
BLAST of Tan0016239 vs. ExPASy Swiss-Prot
Match: Q9SYX2 (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.3e-14 Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of Tan0016239 vs. ExPASy Swiss-Prot
Match: Q9T014 (Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 2.4e-13 Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 0
BLAST of Tan0016239 vs. ExPASy Swiss-Prot
Match: Q9C5U3 (26S proteasome regulatory subunit 8 homolog A OS=Arabidopsis thaliana OX=3702 GN=RPT6A PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12 Identity = 40/54 (74.07%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of Tan0016239 vs. NCBI nr
Match: XP_023523984.1 (protein SPA1-RELATED 3-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73 Identity = 150/193 (77.72%), Postives = 165/193 (85.49%), Query Frame = 0
BLAST of Tan0016239 vs. NCBI nr
Match: XP_023523985.1 (protein SPA1-RELATED 3-like isoform X4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73 Identity = 150/193 (77.72%), Postives = 165/193 (85.49%), Query Frame = 0
BLAST of Tan0016239 vs. NCBI nr
Match: XP_022941020.1 (protein SPA1-RELATED 3-like isoform X1 [Cucurbita moschata] >XP_022941021.1 protein SPA1-RELATED 3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73 Identity = 150/193 (77.72%), Postives = 165/193 (85.49%), Query Frame = 0
BLAST of Tan0016239 vs. NCBI nr
Match: XP_022941022.1 (protein SPA1-RELATED 3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73 Identity = 150/193 (77.72%), Postives = 165/193 (85.49%), Query Frame = 0
BLAST of Tan0016239 vs. NCBI nr
Match: KAG7037407.1 (Protein SPA1-RELATED 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73 Identity = 150/193 (77.72%), Postives = 165/193 (85.49%), Query Frame = 0
BLAST of Tan0016239 vs. ExPASy TrEMBL
Match: A0A6J1FK00 (protein SPA1-RELATED 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446435 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 5.6e-74 Identity = 150/193 (77.72%), Postives = 165/193 (85.49%), Query Frame = 0
BLAST of Tan0016239 vs. ExPASy TrEMBL
Match: A0A6J1FL89 (protein SPA1-RELATED 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446435 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 5.6e-74 Identity = 150/193 (77.72%), Postives = 165/193 (85.49%), Query Frame = 0
BLAST of Tan0016239 vs. ExPASy TrEMBL
Match: A0A6J1FQX5 (protein SPA1-RELATED 3-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111446435 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 5.6e-74 Identity = 150/193 (77.72%), Postives = 165/193 (85.49%), Query Frame = 0
BLAST of Tan0016239 vs. ExPASy TrEMBL
Match: A0A6J1CD52 (protein SPA1-RELATED 3-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010399 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 2.1e-73 Identity = 142/169 (84.02%), Postives = 153/169 (90.53%), Query Frame = 0
BLAST of Tan0016239 vs. ExPASy TrEMBL
Match: A0A6J1CCT5 (protein SPA1-RELATED 3-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111010399 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 2.1e-73 Identity = 142/169 (84.02%), Postives = 153/169 (90.53%), Query Frame = 0
BLAST of Tan0016239 vs. TAIR 10
Match: AT3G15354.1 (SPA1-related 3 ) HSP 1 Score: 174.9 bits (442), Expect = 7.7e-44 Identity = 98/159 (61.64%), Postives = 118/159 (74.21%), Query Frame = 0
BLAST of Tan0016239 vs. TAIR 10
Match: AT1G53090.1 (SPA1-related 4 ) HSP 1 Score: 159.1 bits (401), Expect = 4.4e-39 Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0
BLAST of Tan0016239 vs. TAIR 10
Match: AT1G53090.2 (SPA1-related 4 ) HSP 1 Score: 159.1 bits (401), Expect = 4.4e-39 Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0
BLAST of Tan0016239 vs. TAIR 10
Match: AT2G46340.1 (SPA (suppressor of phyA-105) protein family ) HSP 1 Score: 81.6 bits (200), Expect = 8.9e-16 Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = 0
BLAST of Tan0016239 vs. TAIR 10
Match: AT4G11110.1 (SPA1-related 2 ) HSP 1 Score: 77.4 bits (189), Expect = 1.7e-14 Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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