Tan0016087 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCAGCCTTCTTCTCTTTGATTTGGGGTTTGCCCACCACCTGTTCGACAAATGGCCTCAATGGCCAATCTCTTTGTTTTCACCTTCTTTCTTCTATTTGGTTCATGGGTATTGCTCATTTTCTCTTCAAATTTCTTGGGTGTTGATAAAGTTTTGATATTCTTTTTCCCTTTTACATTCCTTGATTTGAGTTGGAGTTCTTGTCTGTTCTTTTTTTTCTTTTTGCAGGGTTCAGCCAATGCCAATGTCAATGGACTGTCCCAAGAGAAGGTGATTTGATTTACTTTTCTTGTAGCATTGAAATCTTGTTGGTTTTGTTGAATCATTTGAACATCATTTATACCTCATTTTTGTAATGTATTTTAATAATGCAGTGATGAAGTTTAATTTTGCTATTTGCCCTTTTTTTTAAACATTACAGGTTGCTGTTTACCCCAATGTTCCCTTTCCAGTTCCGGCTCCTTCTCCTCCTGTTTACAAAGCTCCGCCGCCGGTTAAGCCACCAACCACCCCTGCTTTGACACCTCCGCCGGTTAAAGCACCATACACCCCTGTTCCACCTCCTCCTTATATTCCTTCTCCGCCGGTGAAGCCGCCAGTCAAAGCTCCTTACACTCCATCTCCGCCTGTCAAGGCACCGTACACTCCTTCTCCGCTAGTGAAGCCTCCGTCTTCTCCTCCGCCGCCGGTGAAAGCTCCTTACACTCCGTCTCCTCCAGTGAAGCCACCGGTGCAAGCTCCTTACACTCCGTTTCCTCCGGTGAAACCACCTTACAGCCCTGTTCCACCTGTGAAACCGCCGTCTCCGGCGGCTCCCAAGCCACGACCAGTCTTCGGCAATGGTAAAGAATTTTCTCTGTATCTTCAACTCATCTTTGCTTCTTCTGGGTTTCTGCATTTCACTCTCAAAGTTCATTAACTTATAGTTTCAAAATTTTTAACTCCCAGGTCTCCGTGTTTTTTTAACTTTTAATTTTATATCCAACAGAAGTACTAAAATGAAAACAAATTTTTAGAAATCGTTTGATACCCCCTTTGATTTTGGCTTTTTGAATATTAAGCTTTTTTTTTTTCCTTAATTTTTGTACCATAGTTTTTATCTCCCTTAAGCAATTCTTTGCTTAATTCTAAAACAAAAAATAAGGTTTTTAAAAACTATTTTTTTTATAAGAAATATATGTAGATTTGAAATCAGGATTTACGGGCTTAATTTTTTAACAACTAAAAATTAAAAAACAAGAATAAAAAATTAAGTTCACATTTATAACAAGCTCTATCGTAGAGATCATCCCAAAATTTAAAAATGAAATCAAGTTTTTGAAATCTATTTTTTTTAGCTTTCAAAAGTTGGCTTGTTTTTGAAAGGATAGGTACAAAATAGAAAAGAACATTTATAAATTCATTGATACAAATAGTATTTTTAATTTTAAATTTCAAAAACTAAAAACAAAACATAAAGTTTGAAGGATTAACCAAATCGAGACGATTATGGATGTTGTGGAAACAGAATGCTACCCACAATGTGGAAGAAGATGCCAACTTCATTCAAGGAAAAGAGTATGCATAAGGGCTTGTGTAACCTGTTGCTACCGGTGCAAGTGTGTTCCACCAGGGACTTATGGGAACAGAGAAGTCTGTGGAAAGTGCTACACTGATATGACCACTCATGGAAACAGAATCAAGTGCCCTTAAAAATGGACTAACAAACAAGAACGAACAATACAGAGTTTTTTTTATTCTTAAAAAAATTTATATATAGTTCTAGTTCTTGTTCTTCTTTCAAGGGTTTTTGTTGTTGCTTGCTTCAATGAGGAGAGTGAGAAAATAAACAAGGGTTTTCTACTTTTCCAAAAGAGCACTTAAGATTTTAGGCCAGGCCTTGCTCATAATTATTGGATGCTCTGTTTTGGAGTGTTTGAGTTTGATGTATGATATTGATATTATCTAGTTGTGTTTTTCCAAGTTGTTTGTGTGTTTTTTTTTTTTAATTATTCAAACTTGGATTTGTGTGCAA AACCAGCCTTCTTCTCTTTGATTTGGGGTTTGCCCACCACCTGTTCGACAAATGGCCTCAATGGCCAATCTCTTTGTTTTCACCTTCTTTCTTCTATTTGGTTCATGGGGTTCAGCCAATGCCAATGTCAATGGACTGTCCCAAGAGAAGGTTGCTGTTTACCCCAATGTTCCCTTTCCAGTTCCGGCTCCTTCTCCTCCTGTTTACAAAGCTCCGCCGCCGGTTAAGCCACCAACCACCCCTGCTTTGACACCTCCGCCGGTTAAAGCACCATACACCCCTGTTCCACCTCCTCCTTATATTCCTTCTCCGCCGGTGAAGCCGCCAGTCAAAGCTCCTTACACTCCATCTCCGCCTGTCAAGGCACCGTACACTCCTTCTCCGCTAGTGAAGCCTCCGTCTTCTCCTCCGCCGCCGGTGAAAGCTCCTTACACTCCGTCTCCTCCAGTGAAGCCACCGGTGCAAGCTCCTTACACTCCGTTTCCTCCGGTGAAACCACCTTACAGCCCTGTTCCACCTGTGAAACCGCCGTCTCCGGCGGCTCCCAAGCCACGACCAGTCTTCGGCAATGAATGCTACCCACAATGTGGAAGAAGATGCCAACTTCATTCAAGGAAAAGAGTATGCATAAGGGCTTGTGTAACCTGTTGCTACCGGTGCAAGTGTGTTCCACCAGGGACTTATGGGAACAGAGAAGTCTGTGGAAAGTGCTACACTGATATGACCACTCATGGAAACAGAATCAAGTGCCCTTAAAAATGGACTAACAAACAAGAACGAACAATACAGAGTTTTTTTTATTCTTAAAAAAATTTATATATAGTTCTAGTTCTTGTTCTTCTTTCAAGGGTTTTTGTTGTTGCTTGCTTCAATGAGGAGAGTGAGAAAATAAACAAGGGTTTTCTACTTTTCCAAAAGAGCACTTAAGATTTTAGGCCAGGCCTTGCTCATAATTATTGGATGCTCTGTTTTGGAGTGTTTGAGTTTGATGTATGATATTGATATTATCTAGTTGTGTTTTTCCAAGTTGTTTGTGTGTTTTTTTTTTTTAATTATTCAAACTTGGATTTGTGTGCAA ATGGCCTCAATGGCCAATCTCTTTGTTTTCACCTTCTTTCTTCTATTTGGTTCATGGGGTTCAGCCAATGCCAATGTCAATGGACTGTCCCAAGAGAAGGTTGCTGTTTACCCCAATGTTCCCTTTCCAGTTCCGGCTCCTTCTCCTCCTGTTTACAAAGCTCCGCCGCCGGTTAAGCCACCAACCACCCCTGCTTTGACACCTCCGCCGGTTAAAGCACCATACACCCCTGTTCCACCTCCTCCTTATATTCCTTCTCCGCCGGTGAAGCCGCCAGTCAAAGCTCCTTACACTCCATCTCCGCCTGTCAAGGCACCGTACACTCCTTCTCCGCTAGTGAAGCCTCCGTCTTCTCCTCCGCCGCCGGTGAAAGCTCCTTACACTCCGTCTCCTCCAGTGAAGCCACCGGTGCAAGCTCCTTACACTCCGTTTCCTCCGGTGAAACCACCTTACAGCCCTGTTCCACCTGTGAAACCGCCGTCTCCGGCGGCTCCCAAGCCACGACCAGTCTTCGGCAATGAATGCTACCCACAATGTGGAAGAAGATGCCAACTTCATTCAAGGAAAAGAGTATGCATAAGGGCTTGTGTAACCTGTTGCTACCGGTGCAAGTGTGTTCCACCAGGGACTTATGGGAACAGAGAAGTCTGTGGAAAGTGCTACACTGATATGACCACTCATGGAAACAGAATCAAGTGCCCTTAA MASMANLFVFTFFLLFGSWGSANANVNGLSQEKVAVYPNVPFPVPAPSPPVYKAPPPVKPPTTPALTPPPVKAPYTPVPPPPYIPSPPVKPPVKAPYTPSPPVKAPYTPSPLVKPPSSPPPPVKAPYTPSPPVKPPVQAPYTPFPPVKPPYSPVPPVKPPSPAAPKPRPVFGNECYPQCGRRCQLHSRKRVCIRACVTCCYRCKCVPPGTYGNREVCGKCYTDMTTHGNRIKCP Homology
BLAST of Tan0016087 vs. ExPASy Swiss-Prot
Match: Q9LFR3 (Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.0e-29 Identity = 129/284 (45.42%), Postives = 154/284 (54.23%), Query Frame = 0
BLAST of Tan0016087 vs. NCBI nr
Match: XP_038903485.1 (gibberellin-regulated protein 14 [Benincasa hispida]) HSP 1 Score: 313.5 bits (802), Expect = 1.5e-81 Identity = 187/252 (74.21%), Postives = 198/252 (78.57%), Query Frame = 0
BLAST of Tan0016087 vs. NCBI nr
Match: XP_008443473.1 (PREDICTED: gibberellin-regulated protein 14 [Cucumis melo]) HSP 1 Score: 309.3 bits (791), Expect = 2.8e-80 Identity = 178/247 (72.06%), Postives = 189/247 (76.52%), Query Frame = 0
BLAST of Tan0016087 vs. NCBI nr
Match: XP_022150124.1 (gibberellin-regulated protein 14 [Momordica charantia]) HSP 1 Score: 290.4 bits (742), Expect = 1.4e-74 Identity = 179/254 (70.47%), Postives = 191/254 (75.20%), Query Frame = 0
BLAST of Tan0016087 vs. NCBI nr
Match: XP_004147446.2 (gibberellin-regulated protein 14 [Cucumis sativus] >KGN59629.1 hypothetical protein Csa_001168 [Cucumis sativus]) HSP 1 Score: 287.3 bits (734), Expect = 1.2e-73 Identity = 176/242 (72.73%), Postives = 190/242 (78.51%), Query Frame = 0
BLAST of Tan0016087 vs. NCBI nr
Match: XP_022983874.1 (gibberellin-regulated protein 14 [Cucurbita maxima]) HSP 1 Score: 282.0 bits (720), Expect = 4.8e-72 Identity = 165/242 (68.18%), Postives = 173/242 (71.49%), Query Frame = 0
BLAST of Tan0016087 vs. ExPASy TrEMBL
Match: A0A1S3B840 (gibberellin-regulated protein 14 OS=Cucumis melo OX=3656 GN=LOC103487058 PE=3 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.4e-80 Identity = 178/247 (72.06%), Postives = 189/247 (76.52%), Query Frame = 0
BLAST of Tan0016087 vs. ExPASy TrEMBL
Match: A0A6J1D924 (gibberellin-regulated protein 14 OS=Momordica charantia OX=3673 GN=LOC111018378 PE=3 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 6.6e-75 Identity = 179/254 (70.47%), Postives = 191/254 (75.20%), Query Frame = 0
BLAST of Tan0016087 vs. ExPASy TrEMBL
Match: A0A0A0LFE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G829190 PE=3 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 5.6e-74 Identity = 176/242 (72.73%), Postives = 190/242 (78.51%), Query Frame = 0
BLAST of Tan0016087 vs. ExPASy TrEMBL
Match: A0A6J1J8R5 (gibberellin-regulated protein 14 OS=Cucurbita maxima OX=3661 GN=LOC111482357 PE=3 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 2.3e-72 Identity = 165/242 (68.18%), Postives = 173/242 (71.49%), Query Frame = 0
BLAST of Tan0016087 vs. ExPASy TrEMBL
Match: A0A6J1F0Y7 (gibberellin-regulated protein 14 OS=Cucurbita moschata OX=3662 GN=LOC111441388 PE=3 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 1.7e-70 Identity = 164/242 (67.77%), Postives = 171/242 (70.66%), Query Frame = 0
BLAST of Tan0016087 vs. TAIR 10
Match: AT5G14920.1 (Gibberellin-regulated family protein ) HSP 1 Score: 129.8 bits (325), Expect = 2.9e-30 Identity = 129/284 (45.42%), Postives = 154/284 (54.23%), Query Frame = 0
BLAST of Tan0016087 vs. TAIR 10
Match: AT1G28290.1 (arabinogalactan protein 31 ) HSP 1 Score: 44.3 bits (103), Expect = 1.6e-04 Identity = 80/184 (43.48%), Postives = 90/184 (48.91%), Query Frame = 0
BLAST of Tan0016087 vs. TAIR 10
Match: AT4G15160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 43.9 bits (102), Expect = 2.1e-04 Identity = 68/147 (46.26%), Postives = 72/147 (48.98%), Query Frame = 0
BLAST of Tan0016087 vs. TAIR 10
Match: AT3G22120.1 (cell wall-plasma membrane linker protein ) HSP 1 Score: 42.4 bits (98), Expect = 6.0e-04 Identity = 72/169 (42.60%), Postives = 80/169 (47.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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