Tan0015888 (gene) Snake gourd v1

Overview


Name	Tan0015888
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Small ubiquitin-related modifier
Location	LG01: 18544063 .. 18547314 (+)
RNA-Seq Expression	Tan0015888
Synteny	Tan0015888

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGGCGTCACCAACCAAGAGGAGGACAAGAAGCCTACCGATCAGTCCGCGCATATCAACCTCAAAGTCAAGGGCCAGGTTTCTCCAACTTCCCTACCTTTCAGCTTTTCCTTTTTCGCTTTCTTGCTTCTTCCGTTGTGAGAATTTAGTAGTGCAGGGGCATGTTTGAATTCCATTTGTGGAAGGAATTTGCATGCCTTTTCCAACGGATCATTCTAGGGATTCTGGGTTTTGTTTGTTATAGTGAGTTTCAGACTTGTTGATATATACCGTAGACAGGATTTGGATTTTATTCGAACCACATGTACTTGTATGATAGGGTTTTACTTTTCTGTGAATTTCATGGTCTACTAATAGGTCTGTATTCTTTATTGTGTGAATAATTTGATGTAGTATGAACTAACTGGCAAGGTATGTTTAGCTGTGAATTTGAGGTATTTGAGAAGTGATGTGAACAATTTGATTACTCTTCAAACATTTGCTATTAATTTTCATGTTACCTGTGGCTACATCCTATTAGCTCCTAGCTACCACAGGTGTTTGTTCTTGTTAATGTTGCCAGTGGAAGTTTGGAACCCAAGAATTTGATTTTGGACTATAATCCCACCTAAAGCTCCGAACTCTAACCAAACATTTGTTATGTTGTTCTGCATAAAGTGCTAGGAAACTATTAAAGTTGGCCGGGACCCTCATGGCCATTCAAAAAATTTAGCTATGGTATACTTTAATGGATCGAGCGTATTTCTTGTATAGCCCTCCAAGGGTTGAGATATTGTCACGTTTGGCTGCCCAAATGTGGCTCACTAGGGCCTACTTTTATTACTTCTGTAATGAAGTCGTTGACTATTGGTTCAATAAATGAAGTGTTAGTAAATAATACTTGCTTGCTTGATGTGTTAGATAGATTATGAAGTTCAAGCCATATGCAACTGTTACAGTGAAATTTTTGTCTTAACAATATGGTCTAGCAAGTTGCTTTGTAGTTTTATCCTTTTATCTGCTGTCCATGTTTTTGTAGGATGGGAATGAAGTTTTCTTCCGGATCAAAAAGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCAGAGCAGACTCCGGAAGAGGTATCCTCATTTTTTTCATATGTTCTTTCTCACAAATTATAATAGACACAAAATAACGCATAAAGCTGTTTTCTAGTTTCTTTTTCTTACGTTATTTATGTCCACAGCTGGAAATGGAGGATGGAGATGAGATCGATGCAATGCTTCATCAGACTGGAGGCGGAGGTGCTATTATCTAAGTTAATCTCAAAGACAAATAGTTCCTAAAACATCATTTGGAATTTTATATTTTCTTACTACTGCTAGTATGTGCTGAACTTCTGCTGCTGGATGTTGCTTTTGTCTATAAATTACCATTAAGGATTTCTGCCTCTTCCAGTTCTCTAAAAGAAAAAGAGACTTTGTTGGACTCCTTTATATATGTAAATACTGTTGATCTCGATTCCTCCTGTTTCATTTCTCTGAGTACATCCTGAAGTTGCAATGTGATTACATTTGGCTTGTCCTATCTTTTATTTTTTATTTTTTTGGGACAACGTGGCTTTCGAAAGGTGAAATAACTGTACTTTTGAAGGAGCTCCAAAGGAATACATGGTTTCACCAAGAAGGCTTGGTTCTGCAGCTGTACTTGAAGCTTCGTGGGAAGCTAAGTATGTCGTTCAGGGGCCATGACCGTGCAGTCTGCTAGTCTTGACATGTTTATCTGTTGTTCAGAGATAGACATTGTTTTCCAAAGCAGTACGGTACATTCATTCCTTTGATGTCCTTAAAAGTCCCAACATCATGAAGGAAACAAAGCTTATGCCATGGATCAAGCTGTTATCTGTCTCATAATTGGCCTAATGATGGTACTAGTTCGTTTTAATGGATAAACAACTGAAAAATATTGATCAAGAAAGCTGTTGCTTTGCTATCTGAACCACGAAATGTTTGATTTCTCTGCAAAACATAAAATAGTTCCTGTAGAAGAGGAAGTTTATTTGCCGGAGAAGCATGAGAATCTTCCTAGAGATAAGAAGGAAGGTTAACAATTTTAACGAGGATGAGATTGGAAAGTTTATGTTTGTATAATTTGTGCTTTAATTCTCAATTATTTCATTCTCTATCAATTTTATTGATCAGTGTCCCTACACGCCCAAGTCTGTGCTGGAGAAAAAGTATCTCTATTATTTCATCCCCTCCTCTCTATATATGTGAAGAACGAAAAATTTGTCCCTCTCCTATCTGTGTGAAGAGGGGAAAACAATTCTGTCCTTCCATCCCTATGAGAGAAAAAATTTGGAAGAGAGGAGGATGTGATTTGATGTCATTTTCTATTAAGCTAGGCTCGGAGTGGCAGGGATGAGCAAGATTTTGCGATACTTTTATCTGATATAAGATATAAGATTCATGGGGTTGGACTTGAGAGTATTGTGTTTTCAAGTATCATTTATATGTATAGATAAGATTATAGGGGTTTTCTGTCTCTTTGTTCTTTGCTTTTCACTTTTATCTGTAATTTTATTTTGAAAATAGTCAATTAATTAATTAAATCAGATTTATTTACCAATATTAATATAATGGATTATTTATTGAGAGTAGATCGAGAAACTTTTTTGTTAAAATATATGCATAATTCATTTTTACAAATAAAAGTTAATTACTTATTTACTGGAATTAATTTTGATTAATTTATTAAAATTATATAAGGTTTCCATCCATAAAATTTCGACAACATTTTTATGCACAATCATATATTATTGTTAGGCATGAGAATGTATAAAACCTAGAAATTAAAGATGACTGCATTTTGTAGTTGAACAAACCATAACACAATCGACAATTCCACCCTTTAGAAATTAGATTTGGGCGGGAGGGTGAGATATTAATTTCAGATTCATAAACAACTTGTAAGCCACCGTTAACATATAGTAGAAGCCCCTTTTTGTCATACTGCCAAAACGCCACCTATCCGGGGGAGATATTTGTTTAACAAATAGGGGTTGTGCCAATAATGTCACTGTCAATATTAGTCTTTGTGCTTTTGTTGGAAACATGGTCTACTACTCAATATCATTCCTACAAAAACGTGCAAAAAAACCTCGTATTCATCTCATGTAGGATTTTTGTTGAGCCTTTGAAGGAGAGGAGAGGATTGTTAA

mRNA sequence

ATGTCCGGCGTCACCAACCAAGAGGAGGACAAGAAGCCTACCGATCAGTCCGCGCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCCGGATCAAAAAGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCAGAGCAGACTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATCGATGCAATGCTTCATCAGACTGGAGGCGGAGCTCCAAAGGAATACATGGTTTCACCAAGAAGGCTTGGTTCTGCAGCTGTACTTGAAGCTTCGTGGGAAGCTAAGTATGTCGATTGTTAA

Coding sequence (CDS)

ATGTCCGGCGTCACCAACCAAGAGGAGGACAAGAAGCCTACCGATCAGTCCGCGCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCCGGATCAAAAAGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGTGCAGAGCAGACTCCGGAAGAGCTGGAAATGGAGGATGGAGATGAGATCGATGCAATGCTTCATCAGACTGGAGGCGGAGCTCCAAAGGAATACATGGTTTCACCAAGAAGGCTTGGTTCTGCAGCTGTACTTGAAGCTTCGTGGGAAGCTAAGTATGTCGATTGTTAA

Protein sequence

MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGAPKEYMVSPRRLGSAAVLEASWEAKYVDC

Homology

[Close]

BLAST of Tan0015888 vs. ExPASy Swiss-Prot
Match: P55852 (Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 8.4e-42
Identity = 83/90 (92.22%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 6  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFD 65
          NQEEDKKP D  AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD+NSIAFLFD
Sbjct: 4  NQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFD 63

Query: 66 GRRLRAEQTPEELEMEDGDEIDAMLHQTGG 96
          GRRLRAEQTP+EL+MEDGDEIDAMLHQTGG
Sbjct: 64 GRRLRAEQTPDELDMEDGDEIDAMLHQTGG 93

[Close]

BLAST of Tan0015888 vs. ExPASy Swiss-Prot
Match: Q9FLP6 (Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.4e-41
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 8  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 67
          EEDKKP DQ AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6  EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 68 RLRAEQTPEELEMEDGDEIDAMLHQTGGGA 98
          RLRAEQTP+ELEMEDGDEIDAMLHQTGGGA
Sbjct: 66 RLRAEQTPDELEMEDGDEIDAMLHQTGGGA 94

[Close]

BLAST of Tan0015888 vs. ExPASy Swiss-Prot
Match: P55857 (Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SUMO1 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 2.5e-38
Identity = 80/94 (85.11%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 8  EEDKKPT---DQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLF 67
          EEDKKP       AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD+N+IAFLF
Sbjct: 6  EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLF 65

Query: 68 DGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGAP 99
          DGRRLR EQTP+ELEMEDGDEIDAMLHQTGG  P
Sbjct: 66 DGRRLRGEQTPDELEMEDGDEIDAMLHQTGGCLP 99

[Close]

BLAST of Tan0015888 vs. ExPASy Swiss-Prot
Match: O13351 (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmt3 PE=1 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-23
Identity = 54/94 (57.45%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 2   SGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIA 61
           +G T+Q++ K  T+   HINLKV GQD NEVFF+IKK+T+  KLM  YC RQ   +NS+ 
Sbjct: 21  TGDTSQQDVKPSTE---HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLR 80

Query: 62  FLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG 96
           FL DG R+R +QTP EL+MEDGD+I+A+L Q GG
Sbjct: 81  FLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111

[Close]

BLAST of Tan0015888 vs. ExPASy Swiss-Prot
Match: Q9FLP5 (Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.3e-20
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 9  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDG 68
          +D KP D  Q AH+ LKVK QDG+EV F+ KKS  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 69 RRLRAEQTPEELEMEDGDEIDAMLHQTGG 96
           R+   +TP+EL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]

BLAST of Tan0015888 vs. NCBI nr
Match: XP_038905908.1 (small ubiquitin-related modifier 1 [Benincasa hispida])

HSP 1 Score: 193.0 bits (489), Expect = 1.6e-45
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 97
          AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Sbjct: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 96

[Close]

BLAST of Tan0015888 vs. NCBI nr
Match: XP_004149348.1 (small ubiquitin-related modifier 1 [Cucumis sativus] >XP_008449142.2 PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo] >KGN56103.1 hypothetical protein Csa_011007 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 1.6e-45
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 97
          AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Sbjct: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 96

[Close]

BLAST of Tan0015888 vs. NCBI nr
Match: XP_022158763.1 (small ubiquitin-related modifier 1-like [Momordica charantia])

HSP 1 Score: 192.6 bits (488), Expect = 2.1e-45
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSV+LNSI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVELNSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 97
          AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Sbjct: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 96

[Close]

BLAST of Tan0015888 vs. NCBI nr
Match: XP_015899516.1 (small ubiquitin-related modifier 1-like [Ziziphus jujuba])

HSP 1 Score: 188.7 bits (478), Expect = 3.0e-44
Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSI 60
           MSGVTNQEEDKKP+DQ+AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+ NSI
Sbjct: 1   MSGVTNQEEDKKPSDQAAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNSI 60

Query: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGAPKEYMV 104
           AFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  P  Y +
Sbjct: 61  AFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSVPAFYSI 103

[Close]

BLAST of Tan0015888 vs. NCBI nr
Match: XP_018812104.1 (small ubiquitin-related modifier 1 [Juglans regia] >XP_040988284.1 small ubiquitin-related modifier 1 [Juglans microcarpa x Juglans regia] >XP_042950623.1 small ubiquitin-related modifier 1 [Carya illinoinensis] >KAB1215151.1 Small ubiquitin-related modifier 1 [Morella rubra] >KAG2682371.1 hypothetical protein I3760_11G188300 [Carya illinoinensis] >KAG6637670.1 hypothetical protein CIPAW_11G193900 [Carya illinoinensis] >KAG6689772.1 hypothetical protein I3842_11G191100 [Carya illinoinensis] >KAG7957712.1 hypothetical protein I3843_11G189000 [Carya illinoinensis])

HSP 1 Score: 188.0 bits (476), Expect = 5.1e-44
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG 96
          AFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG
Sbjct: 61 AFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 95

[Close]

BLAST of Tan0015888 vs. ExPASy TrEMBL
Match: A0A0A0L2Y3 (Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_3G073930 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.6e-46
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 97
          AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Sbjct: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 96

[Close]

BLAST of Tan0015888 vs. ExPASy TrEMBL
Match: A0A1S3BKS1 (Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103491091 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.6e-46
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 97
          AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Sbjct: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 96

[Close]

BLAST of Tan0015888 vs. ExPASy TrEMBL
Match: A0A6J1DX09 (Small ubiquitin-related modifier OS=Momordica charantia OX=3673 GN=LOC111025229 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.0e-45
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSV+LNSI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVELNSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 97
          AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG
Sbjct: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGG 96

[Close]

BLAST of Tan0015888 vs. ExPASy TrEMBL
Match: A0A6P4BK52 (Small ubiquitin-related modifier OS=Ziziphus jujuba OX=326968 GN=LOC107432826 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44
Identity = 91/103 (88.35%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSI 60
           MSGVTNQEEDKKP+DQ+AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+ NSI
Sbjct: 1   MSGVTNQEEDKKPSDQAAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVEFNSI 60

Query: 61  AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGAPKEYMV 104
           AFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG  P  Y +
Sbjct: 61  AFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGSVPAFYSI 103

[Close]

BLAST of Tan0015888 vs. ExPASy TrEMBL
Match: A0A6A1VQH5 (Small ubiquitin-related modifier OS=Morella rubra OX=262757 GN=CJ030_MR4G001405 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.5e-44
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSI 60
          MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSI
Sbjct: 1  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSI 60

Query: 61 AFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG 96
          AFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG
Sbjct: 61 AFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGG 95

[Close]

BLAST of Tan0015888 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 171.0 bits (432), Expect = 6.0e-43
Identity = 83/90 (92.22%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 6  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFD 65
          NQEEDKKP D  AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD+NSIAFLFD
Sbjct: 4  NQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFD 63

Query: 66 GRRLRAEQTPEELEMEDGDEIDAMLHQTGG 96
          GRRLRAEQTP+EL+MEDGDEIDAMLHQTGG
Sbjct: 64 GRRLRAEQTPDELDMEDGDEIDAMLHQTGG 93

[Close]

BLAST of Tan0015888 vs. TAIR 10
Match: AT5G55160.1 (small ubiquitin-like modifier 2 )

HSP 1 Score: 170.2 bits (430), Expect = 1.0e-42
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 8  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGR 67
          EEDKKP DQ AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD NSIAFLFDGR
Sbjct: 6  EEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGR 65

Query: 68 RLRAEQTPEELEMEDGDEIDAMLHQTGGGA 98
          RLRAEQTP+ELEMEDGDEIDAMLHQTGGGA
Sbjct: 66 RLRAEQTPDELEMEDGDEIDAMLHQTGGGA 94

[Close]

BLAST of Tan0015888 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 161.0 bits (406), Expect = 6.2e-40
Identity = 85/103 (82.52%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 8   EEDKKPTDQSAHINLKVKGQ-------------DGNEVFFRIKKSTQLKKLMNAYCDRQS 67
           EEDKKP DQ AHINLKVKGQ             DGNEVFFRIK+STQLKKLMNAYCDRQS
Sbjct: 6   EEDKKP-DQGAHINLKVKGQAFFVVGTWLVIDTDGNEVFFRIKRSTQLKKLMNAYCDRQS 65

Query: 68  VDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGA 98
           VD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGGA
Sbjct: 66  VDFNSIAFLFDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGGA 107

[Close]

BLAST of Tan0015888 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 98.6 bits (244), Expect = 3.8e-21
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 9  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDG 68
          +D KP D  Q AH+ LKVK QDG+EV F+ KKS  LKKLM  YCDR+ + L++ AF+F+G
Sbjct: 5  QDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNG 64

Query: 69 RRLRAEQTPEELEMEDGDEIDAMLHQTGG 96
           R+   +TP+EL+MEDGD IDA    +GG
Sbjct: 65 ARIGGLETPDELDMEDGDVIDACRAMSGG 93

[Close]

BLAST of Tan0015888 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 9.3e-20
Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 0


Query: 10 DKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRL 69
          DKKP   S+HI +KVK QD   V+FRIK+  +L+K+M+AY D+  V+++++ FLFDG R+
Sbjct: 5  DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64

Query: 70 RAEQTPEELEMEDGDEIDAMLHQTGG 96
          +  QTP EL +ED DEI+A   Q GG
Sbjct: 65 KLNQTPNELGLEDEDEIEAFGEQLGG 90

The following BLAST results are available for this feature:

BLAST of Tan0015888 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55852	8.4e-42	92.22	Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1...	[more]
Q9FLP6	1.4e-41	94.44	Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1...	[more]
P55857	2.5e-38	85.11	Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
O13351	1.8e-23	57.45	Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
Q9FLP5	5.3e-20	55.06	Small ubiquitin-related modifier 3 OS=Arabidopsis thaliana OX=3702 GN=SUMO3 PE=1...	[more]

BLAST of Tan0015888 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905908.1	1.6e-45	98.96	small ubiquitin-related modifier 1 [Benincasa hispida]	[more]
XP_004149348.1	1.6e-45	98.96	small ubiquitin-related modifier 1 [Cucumis sativus] >XP_008449142.2 PREDICTED: ...	[more]
XP_022158763.1	2.1e-45	98.96	small ubiquitin-related modifier 1-like [Momordica charantia]	[more]
XP_015899516.1	3.0e-44	88.35	small ubiquitin-related modifier 1-like [Ziziphus jujuba]	[more]
XP_018812104.1	5.1e-44	96.84	small ubiquitin-related modifier 1 [Juglans regia] >XP_040988284.1 small ubiquit...	[more]

BLAST of Tan0015888 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2Y3	7.6e-46	98.96	Small ubiquitin-related modifier OS=Cucumis sativus OX=3659 GN=Csa_3G073930 PE=3...	[more]
A0A1S3BKS1	7.6e-46	98.96	Small ubiquitin-related modifier OS=Cucumis melo OX=3656 GN=LOC103491091 PE=3 SV...	[more]
A0A6J1DX09	1.0e-45	98.96	Small ubiquitin-related modifier OS=Momordica charantia OX=3673 GN=LOC111025229 ...	[more]
A0A6P4BK52	1.4e-44	88.35	Small ubiquitin-related modifier OS=Ziziphus jujuba OX=326968 GN=LOC107432826 PE...	[more]
A0A6A1VQH5	2.5e-44	96.84	Small ubiquitin-related modifier OS=Morella rubra OX=262757 GN=CJ030_MR4G001405 ...	[more]

BLAST of Tan0015888 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26840.1	6.0e-43	92.22	small ubiquitin-like modifier 1	[more]
AT5G55160.1	1.0e-42	94.44	small ubiquitin-like modifier 2	[more]
AT5G55160.2	6.2e-40	82.52	small ubiquitin-like modifier 2	[more]
AT5G55170.1	3.8e-21	55.06	small ubiquitin-like modifier 3	[more]
AT5G55856.1	9.3e-20	51.16	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 20..91 e-value: 2.6E-14 score: 63.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 18..95 score: 16.102118
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 20..90 e-value: 5.8E-25 score: 86.9
None	No IPR available	GENE3D	3.10.20.90		coord: 2..95 e-value: 6.9E-40 score: 137.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR10562:SF87	SMALL UBIQUITIN-RELATED MODIFIER	coord: 1..96
None	No IPR available	PANTHER	PTHR10562	SMALL UBIQUITIN-RELATED MODIFIER	coord: 1..96
None	No IPR available	CDD	cd16116	Ubl_Smt3_like	coord: 18..91 e-value: 1.15887E-49 score: 150.842
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 8..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0015888.1	Tan0015888.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016925	protein sumoylation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031386	protein tag
molecular_function	GO:0044389	ubiquitin-like protein ligase binding
molecular_function	GO:0005515	protein binding