Tan0015824 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGAATAAAACAGCCTGTGATCCAGCTGTTTAGAAACACACACAAACACTCTCTTCATTTTCACCTCTTTCCCACTTTTCTTCTCCATTTCCCCCAATTCCCCCCTCCGCCATCGCCGCCGTCTCCTCCGCCCTCACATCACCATGTCCTCCGTCGTCCACACCTTCCTCCCGACCAGGCCTCTCCCCGACGCCCTCCCGGTCTCCCACACCGACTCTGCCTCCGAGCAAACTCTCCGCCGCCGCCTCTCCTCTCTCTCCCTCCGAATCCAGCCAATCTCCTCCCCTGCAACCGCCTGGGCGATCCGCAAATCCAAATCCATGTCCTCGATCGGAGATCTCGCCGGAAGCTCCGTCCGCAAGTGGTGGGACTGGGGCTGGGCCTGGATCCTCTCACGCAAACCTATCTTCGCCAAGGATCTCGAGATGAACGAAGAGGAGTCCAAACTCCTCGGATCTCAGAACAGAGGAAGCTGGAGACACGTCTTCTTCAAGTTCAGATCCGAAATCAGAAAGCTCATCGGCTCCGACGTTGGCCTCCCCCAAACCTGCAAGTACCAATCCTTCAATTTCTCCAACAACCTCAACAATGGCGGAATCAGAACCTAATCAATCCATGAATCTCTCTTCAATCACGACCACGATTATTCTTTTCCGTCTTCCTCGCTTCATTTGTAATCGAATTGTATTGTTAAATTCTTTTCGTTTTTTGGTAAGTTCTCGCCAGTGAAGATCGATTAGGGTTCGAATGGAACGATTCCGGTGGTTGAAATTTGCAGCATTGCTGTGGATCCAAGCGAAACAGGTAATATAGAATTGAAATAGGTAGGGACATGGTTGTCATTATTTAGATTGTTACTTTTTTACGTGATGATTGGCTTTTTCTTTTTTAATTTTGTATAAGCATAATAACAGTGCTGTTATTTTTTGTATTGTATTTTACTTTATTATATATATATATATATATATATTTTTTTTTTTTACCGGAG GCGAATAAAACAGCCTGTGATCCAGCTGTTTAGAAACACACACAAACACTCTCTTCATTTTCACCTCTTTCCCACTTTTCTTCTCCATTTCCCCCAATTCCCCCCTCCGCCATCGCCGCCGTCTCCTCCGCCCTCACATCACCATGTCCTCCGTCGTCCACACCTTCCTCCCGACCAGGCCTCTCCCCGACGCCCTCCCGGTCTCCCACACCGACTCTGCCTCCGAGCAAACTCTCCGCCGCCGCCTCTCCTCTCTCTCCCTCCGAATCCAGCCAATCTCCTCCCCTGCAACCGCCTGGGCGATCCGCAAATCCAAATCCATGTCCTCGATCGGAGATCTCGCCGGAAGCTCCGTCCGCAAGTGGTGGGACTGGGGCTGGGCCTGGATCCTCTCACGCAAACCTATCTTCGCCAAGGATCTCGAGATGAACGAAGAGGAGTCCAAACTCCTCGGATCTCAGAACAGAGGAAGCTGGAGACACGTCTTCTTCAAGTTCAGATCCGAAATCAGAAAGCTCATCGGCTCCGACGTTGGCCTCCCCCAAACCTGCAAGTACCAATCCTTCAATTTCTCCAACAACCTCAACAATGGCGGAATCAGAACCTAATCAATCCATGAATCTCTCTTCAATCACGACCACGATTATTCTTTTCCGTCTTCCTCGCTTCATTTGTAATCGAATTGTATTGTTAAATTCTTTTCGTTTTTTGGTAAGTTCTCGCCAGTGAAGATCGATTAGGGTTCGAATGGAACGATTCCGGTGGTTGAAATTTGCAGCATTGCTGTGGATCCAAGCGAAACAGGTAATATAGAATTGAAATAGGTAGGGACATGGTTGTCATTATTTAGATTGTTACTTTTTTACGTGATGATTGGCTTTTTCTTTTTTAATTTTGTATAAGCATAATAACAGTGCTGTTATTTTTTGTATTGTATTTTACTTTATTATATATATATATATATATATATTTTTTTTTTTTACCGGAG ATGTCCTCCGTCGTCCACACCTTCCTCCCGACCAGGCCTCTCCCCGACGCCCTCCCGGTCTCCCACACCGACTCTGCCTCCGAGCAAACTCTCCGCCGCCGCCTCTCCTCTCTCTCCCTCCGAATCCAGCCAATCTCCTCCCCTGCAACCGCCTGGGCGATCCGCAAATCCAAATCCATGTCCTCGATCGGAGATCTCGCCGGAAGCTCCGTCCGCAAGTGGTGGGACTGGGGCTGGGCCTGGATCCTCTCACGCAAACCTATCTTCGCCAAGGATCTCGAGATGAACGAAGAGGAGTCCAAACTCCTCGGATCTCAGAACAGAGGAAGCTGGAGACACGTCTTCTTCAAGTTCAGATCCGAAATCAGAAAGCTCATCGGCTCCGACGTTGGCCTCCCCCAAACCTGCAAGTACCAATCCTTCAATTTCTCCAACAACCTCAACAATGGCGGAATCAGAACCTAA MSSVVHTFLPTRPLPDALPVSHTDSASEQTLRRRLSSLSLRIQPISSPATAWAIRKSKSMSSIGDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKLLGSQNRGSWRHVFFKFRSEIRKLIGSDVGLPQTCKYQSFNFSNNLNNGGIRT Homology
BLAST of Tan0015824 vs. NCBI nr
Match: KAG7010809.1 (hypothetical protein SDJN02_27605, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 284.3 bits (726), Expect = 6.4e-73 Identity = 145/161 (90.06%), Postives = 149/161 (92.55%), Query Frame = 0
BLAST of Tan0015824 vs. NCBI nr
Match: XP_023512870.1 (uncharacterized protein LOC111777478 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72 Identity = 144/161 (89.44%), Postives = 149/161 (92.55%), Query Frame = 0
BLAST of Tan0015824 vs. NCBI nr
Match: KAG6570971.1 (hypothetical protein SDJN03_29886, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 282.7 bits (722), Expect = 1.9e-72 Identity = 144/161 (89.44%), Postives = 148/161 (91.93%), Query Frame = 0
BLAST of Tan0015824 vs. NCBI nr
Match: XP_022986676.1 (uncharacterized protein LOC111484356 [Cucurbita maxima]) HSP 1 Score: 282.7 bits (722), Expect = 1.9e-72 Identity = 144/161 (89.44%), Postives = 148/161 (91.93%), Query Frame = 0
BLAST of Tan0015824 vs. NCBI nr
Match: XP_022943336.1 (uncharacterized protein LOC111448133 [Cucurbita moschata]) HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71 Identity = 143/161 (88.82%), Postives = 148/161 (91.93%), Query Frame = 0
BLAST of Tan0015824 vs. ExPASy TrEMBL
Match: A0A6J1JBW3 (uncharacterized protein LOC111484356 OS=Cucurbita maxima OX=3661 GN=LOC111484356 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 9.0e-73 Identity = 144/161 (89.44%), Postives = 148/161 (91.93%), Query Frame = 0
BLAST of Tan0015824 vs. ExPASy TrEMBL
Match: A0A6J1FRF7 (uncharacterized protein LOC111448133 OS=Cucurbita moschata OX=3662 GN=LOC111448133 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 5.9e-72 Identity = 143/161 (88.82%), Postives = 148/161 (91.93%), Query Frame = 0
BLAST of Tan0015824 vs. ExPASy TrEMBL
Match: A0A0A0KE14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G117780 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 9.4e-70 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 0
BLAST of Tan0015824 vs. ExPASy TrEMBL
Match: A0A5A7U301 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00710 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 2.3e-68 Identity = 137/161 (85.09%), Postives = 143/161 (88.82%), Query Frame = 0
BLAST of Tan0015824 vs. ExPASy TrEMBL
Match: A0A5D3CRS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1275G00020 PE=4 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 3.9e-68 Identity = 136/161 (84.47%), Postives = 143/161 (88.82%), Query Frame = 0
BLAST of Tan0015824 vs. TAIR 10
Match: AT4G35320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 137.9 bits (346), Expect = 6.9e-33 Identity = 74/147 (50.34%), Postives = 102/147 (69.39%), Query Frame = 0
BLAST of Tan0015824 vs. TAIR 10
Match: AT2G17300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35320.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 120.9 bits (302), Expect = 8.8e-28 Identity = 70/141 (49.65%), Postives = 96/141 (68.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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