Tan0015473 (gene) Snake gourd v1

Overview


Name	Tan0015473
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	dCTP pyrophosphatase 1
Location	LG07: 47060222 .. 47061057 (+)
RNA-Seq Expression	Tan0015473
Synteny	Tan0015473

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAAACGCGGAGGTTGATGGACTTTTTCGGATTTTTTCACGCTACGACAAAACTTGACACTTTAAAAATGTCAAGTTTCAAAACCCTAAAATATTGGGGGCGACAAGTGCACACACAGGCTGCCGCTTCATTTTGTGAAAAAAAAAAAAGAAAAAAACATTCAAGACTTGTGCCCCGTATTCTCCCTCCTCTCACGCTGCCACTCTCACCATCGCTCTCCTCTCTCTCTGAAATTTTGAAGAACACAAAATCGATCACTCTCACCGTCGCTCTCCCCTCTCCAACAAGCCCGTTTCAGTTTTTTATCCAAAAACCTTGTCACCGCTAACCCTGCAACATTACTGGAAGTGGCCAAATCTCTCAAAGAAATCTCGACCTGCAACTTGCCCCCACCACCCTTCTTCTCTATCGTCGATTGCATGTCGCTTCTTTTCTTCTTCTTTTGTTGGTTCTTCAAATTGTTAGCTCATTTGCACAATGACAAGCAATTGAATAGACGACAAGTGAGTTATTACTAGATGCCCTAGAATAATATGTTGTAAATATAGTCAAATTATCAAAAAATTCTGGTTCATGTTTTATGTTATCTGTTTTGGAATTTCCCTCAGGTGGGGTGAAGTATAAGAGTTATCTGAGATATTCCAGTAGAAAGGGGAGGTTCCGAGAGGCCTTCCTGACTGGAAAGATGAAGAGAAACAGAATCTTGGAGAAGAACTCTCAAACGTTCTGTTGTACCTTGTTAGGCTTGTTGATATTTGTCGGATTGATGTTGGCAAAGTCGCTCTATGGAAGCTGGAGCTCAATGACAAGAAATACCCAGTCAAGCTTTGA

mRNA sequence

ATGAAAAAAACGCGGAGGTTGATGGACTTTTTCGGATTTTTTCACGCTACGACAAAACTTGACACTTTAAAAATGTCAAGTTTCAAAACCCTAAAATATTGGGGGCGACAAAAAGGGGAGGTTCCGAGAGGCCTTCCTGACTGGAAAGATGAAGAGAAACAGAATCTTGGAGAAGAACTCTCAAACGTTCTGTTGTACCTTGTTAGGCTTGTTGATATTTGTCGGATTGATGTTGGCAAAGTCGCTCTATGGAAGCTGGAGCTCAATGACAAGAAATACCCAGTCAAGCTTTGA

Coding sequence (CDS)

ATGAAAAAAACGCGGAGGTTGATGGACTTTTTCGGATTTTTTCACGCTACGACAAAACTTGACACTTTAAAAATGTCAAGTTTCAAAACCCTAAAATATTGGGGGCGACAAAAAGGGGAGGTTCCGAGAGGCCTTCCTGACTGGAAAGATGAAGAGAAACAGAATCTTGGAGAAGAACTCTCAAACGTTCTGTTGTACCTTGTTAGGCTTGTTGATATTTGTCGGATTGATGTTGGCAAAGTCGCTCTATGGAAGCTGGAGCTCAATGACAAGAAATACCCAGTCAAGCTTTGA

Protein sequence

MKKTRRLMDFFGFFHATTKLDTLKMSSFKTLKYWGRQKGEVPRGLPDWKDEEKQNLGEELSNVLLYLVRLVDICRIDVGKVALWKLELNDKKYPVKL

Homology

[Close]

BLAST of Tan0015473 vs. ExPASy Swiss-Prot
Match: Q32KY6 (dCTP pyrophosphatase 1 OS=Bos taurus OX=9913 GN=DCTPP1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-05
Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 0


Query: 48  WKDEEKQNLGEELSNVLLYLVRLVDICRIDVGKVALWKLELNDKKYPVKL 98
           W   E+  L EELS++L+YLV L   CR+D+ +  L K++ N ++YPV L
Sbjct: 83  WSPRERAALQEELSDILIYLVALAARCRVDLPQAVLCKMDTNRRRYPVHL 132

[Close]

BLAST of Tan0015473 vs. ExPASy Swiss-Prot
Match: Q91VC0 (dCTP pyrophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Dctpp1 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-05
Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 38  KGEVPRGLPDWKDEEKQNLGEELSNVLLYLVRLVDICRIDVGKVALWKLELNDKKYPVKL 97
           K +   G   W+ +E+  L EELS+VL+YLV L   C +D+ +  + K++ N ++YPV L
Sbjct: 74  KSDAEPGPQAWQPKERAALQEELSDVLIYLVALAARCHVDLPRAVISKMDTNRQRYPVHL 133

[Close]

BLAST of Tan0015473 vs. ExPASy Swiss-Prot
Match: Q9H773 (dCTP pyrophosphatase 1 OS=Homo sapiens OX=9606 GN=DCTPP1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.9e-05
Identity = 23/54 (42.59%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 44  GLPDWKDEEKQNLGEELSNVLLYLVRLVDICRIDVGKVALWKLELNDKKYPVKL 98
           G   W   E+  L EELS+VL+YLV L   CR+D+    L K+++N ++YP  L
Sbjct: 80  GPQGWSPRERAALQEELSDVLIYLVALAARCRVDLPLAVLSKMDINRRRYPAHL 133

[Close]

BLAST of Tan0015473 vs. ExPASy Swiss-Prot
Match: Q9QY93 (dCTP pyrophosphatase 1 OS=Mus musculus OX=10090 GN=Dctpp1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 3.7e-05
Identity = 23/60 (38.33%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 38  KGEVPRGLPDWKDEEKQNLGEELSNVLLYLVRLVDICRIDVGKVALWKLELNDKKYPVKL 97
           K +   G   W  +E+  L EELS+VL+YLV L   C +D+ +  + K++ N ++YPV L
Sbjct: 74  KSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHVDLPQAVISKMDTNRQRYPVHL 133

[Close]

BLAST of Tan0015473 vs. NCBI nr
Match: XP_038877931.1 (dCTP pyrophosphatase 1-like [Benincasa hispida])

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-19
Identity = 55/84 (65.48%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 14  FHATTKLDTLKMSSFKTLKYWGRQKGEVPRGLPDWKDEEKQNLGEELSNVLLYLVRLVDI 73
           FH+   L    +     L    + KGEVPRGLPDWKDEEKQ+LGEELS+VLLYLVRL DI
Sbjct: 31  FHSPRNLLLAMVGEVGELSEIFQWKGEVPRGLPDWKDEEKQHLGEELSDVLLYLVRLADI 90

Query: 74  CRIDVGKVALWKLELNDKKYPVKL 98
           C ID+GK  L KLELN KKYPVKL
Sbjct: 91  CGIDLGKAVLRKLELNGKKYPVKL 114

[Close]

BLAST of Tan0015473 vs. NCBI nr
Match: XP_022145107.1 (dCTP pyrophosphatase 1-like [Momordica charantia])

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-19
Identity = 55/84 (65.48%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 14  FHATTKLDTLKMSSFKTLKYWGRQKGEVPRGLPDWKDEEKQNLGEELSNVLLYLVRLVDI 73
           FH+   L    +     L    + KGEVPRGLPDWK+EEKQ+LGEELS+VLLYLVRL DI
Sbjct: 31  FHSPRNLLLAMVGEVGELSEIFQWKGEVPRGLPDWKEEEKQHLGEELSDVLLYLVRLADI 90

Query: 74  CRIDVGKVALWKLELNDKKYPVKL 98
           C ID+GK AL KLELN KKYPVKL
Sbjct: 91  CGIDLGKAALRKLELNAKKYPVKL 114

[Close]

BLAST of Tan0015473 vs. NCBI nr
Match: XP_022955550.1 (dCTP pyrophosphatase 1-like [Cucurbita moschata] >KAG6582038.1 dCTP pyrophosphatase 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018464.1 dCTP pyrophosphatase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105.1 bits (261), Expect = 3.4e-19
Identity = 55/84 (65.48%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 14  FHATTKLDTLKMSSFKTLKYWGRQKGEVPRGLPDWKDEEKQNLGEELSNVLLYLVRLVDI 73
           FH+   L    +     L    + KGEVPRGLP WKDEEKQ+LGEELS+VLLYLVRL DI
Sbjct: 30  FHSPRNLLLAMVGEVGELSEIFQWKGEVPRGLPGWKDEEKQHLGEELSDVLLYLVRLADI 89

Query: 74  CRIDVGKVALWKLELNDKKYPVKL 98
           C ID+GK AL KLELN KKYPVKL
Sbjct: 90  CGIDLGKAALRKLELNAKKYPVKL 113

[Close]

BLAST of Tan0015473 vs. NCBI nr
Match: XP_022979978.1 (dCTP pyrophosphatase 1-like [Cucurbita maxima])

HSP 1 Score: 105.1 bits (261), Expect = 3.4e-19
Identity = 55/84 (65.48%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 14  FHATTKLDTLKMSSFKTLKYWGRQKGEVPRGLPDWKDEEKQNLGEELSNVLLYLVRLVDI 73
           FH+   L    +     L    + KGEVPRGLP WKDEEKQ+LGEELS+VLLYLVRL DI
Sbjct: 30  FHSPRNLLLAMVGEVGELSEIFQWKGEVPRGLPGWKDEEKQHLGEELSDVLLYLVRLADI 89

Query: 74  CRIDVGKVALWKLELNDKKYPVKL 98
           C ID+GK AL KLELN KKYPVKL
Sbjct: 90  CGIDLGKAALRKLELNAKKYPVKL 113

[Close]

BLAST of Tan0015473 vs. NCBI nr
Match: XP_008454003.1 (PREDICTED: dCTP pyrophosphatase 1-like [Cucumis melo] >KAA0044577.1 dCTP pyrophosphatase 1-like [Cucumis melo var. makuwa] >TYK17006.1 dCTP pyrophosphatase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 104.4 bits (259), Expect = 5.7e-19
Identity = 58/103 (56.31%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 1   MKKTRRLM-DF-----FGFFHATTKLDTLKMSSFKTLKYWGRQKGEVPRGLPDWKDEEKQ 60
           +KK + +M DF     +  FH+   L    +S    L    + KGEVPRGLPDWK+EEKQ
Sbjct: 11  LKKLKNMMADFAKERDWDQFHSPRNLLLAMVSEVGELSEIFQWKGEVPRGLPDWKEEEKQ 70

Query: 61  NLGEELSNVLLYLVRLVDICRIDVGKVALWKLELNDKKYPVKL 98
           +LGEELS+VLLYLVRL DIC ID+GK  L K+ELN KKYPV+L
Sbjct: 71  HLGEELSDVLLYLVRLADICGIDLGKAVLRKMELNGKKYPVEL 113

[Close]

BLAST of Tan0015473 vs. ExPASy TrEMBL
Match: A0A6J1CVJ8 (dCTP pyrophosphatase 1 OS=Momordica charantia OX=3673 GN=LOC111014625 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.3e-20
Identity = 55/84 (65.48%), Postives = 62/84 (73.81%), Query Frame = 0


Query: 14  FHATTKLDTLKMSSFKTLKYWGRQKGEVPRGLPDWKDEEKQNLGEELSNVLLYLVRLVDI 73
           FH+   L    +     L    + KGEVPRGLPDWK+EEKQ+LGEELS+VLLYLVRL DI
Sbjct: 31  FHSPRNLLLAMVGEVGELSEIFQWKGEVPRGLPDWKEEEKQHLGEELSDVLLYLVRLADI 90

Query: 74  CRIDVGKVALWKLELNDKKYPVKL 98
           C ID+GK AL KLELN KKYPVKL
Sbjct: 91  CGIDLGKAALRKLELNAKKYPVKL 114

[Close]

BLAST of Tan0015473 vs. ExPASy TrEMBL
Match: A0A6J1IXV8 (dCTP pyrophosphatase 1 OS=Cucurbita maxima OX=3661 GN=LOC111479510 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-19
Identity = 55/84 (65.48%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 14  FHATTKLDTLKMSSFKTLKYWGRQKGEVPRGLPDWKDEEKQNLGEELSNVLLYLVRLVDI 73
           FH+   L    +     L    + KGEVPRGLP WKDEEKQ+LGEELS+VLLYLVRL DI
Sbjct: 30  FHSPRNLLLAMVGEVGELSEIFQWKGEVPRGLPGWKDEEKQHLGEELSDVLLYLVRLADI 89

Query: 74  CRIDVGKVALWKLELNDKKYPVKL 98
           C ID+GK AL KLELN KKYPVKL
Sbjct: 90  CGIDLGKAALRKLELNAKKYPVKL 113

[Close]

BLAST of Tan0015473 vs. ExPASy TrEMBL
Match: A0A6J1GVE4 (dCTP pyrophosphatase 1 OS=Cucurbita moschata OX=3662 GN=LOC111457533 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.6e-19
Identity = 55/84 (65.48%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 14  FHATTKLDTLKMSSFKTLKYWGRQKGEVPRGLPDWKDEEKQNLGEELSNVLLYLVRLVDI 73
           FH+   L    +     L    + KGEVPRGLP WKDEEKQ+LGEELS+VLLYLVRL DI
Sbjct: 30  FHSPRNLLLAMVGEVGELSEIFQWKGEVPRGLPGWKDEEKQHLGEELSDVLLYLVRLADI 89

Query: 74  CRIDVGKVALWKLELNDKKYPVKL 98
           C ID+GK AL KLELN KKYPVKL
Sbjct: 90  CGIDLGKAALRKLELNAKKYPVKL 113

[Close]

BLAST of Tan0015473 vs. ExPASy TrEMBL
Match: A0A5D3D2K4 (dCTP pyrophosphatase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001500 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.8e-19
Identity = 58/103 (56.31%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 1   MKKTRRLM-DF-----FGFFHATTKLDTLKMSSFKTLKYWGRQKGEVPRGLPDWKDEEKQ 60
           +KK + +M DF     +  FH+   L    +S    L    + KGEVPRGLPDWK+EEKQ
Sbjct: 11  LKKLKNMMADFAKERDWDQFHSPRNLLLAMVSEVGELSEIFQWKGEVPRGLPDWKEEEKQ 70

Query: 61  NLGEELSNVLLYLVRLVDICRIDVGKVALWKLELNDKKYPVKL 98
           +LGEELS+VLLYLVRL DIC ID+GK  L K+ELN KKYPV+L
Sbjct: 71  HLGEELSDVLLYLVRLADICGIDLGKAVLRKMELNGKKYPVEL 113

[Close]

BLAST of Tan0015473 vs. ExPASy TrEMBL
Match: A0A1S3BYE4 (dCTP pyrophosphatase 1 OS=Cucumis melo OX=3656 GN=LOC103494554 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.8e-19
Identity = 58/103 (56.31%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 1   MKKTRRLM-DF-----FGFFHATTKLDTLKMSSFKTLKYWGRQKGEVPRGLPDWKDEEKQ 60
           +KK + +M DF     +  FH+   L    +S    L    + KGEVPRGLPDWK+EEKQ
Sbjct: 11  LKKLKNMMADFAKERDWDQFHSPRNLLLAMVSEVGELSEIFQWKGEVPRGLPDWKEEEKQ 70

Query: 61  NLGEELSNVLLYLVRLVDICRIDVGKVALWKLELNDKKYPVKL 98
           +LGEELS+VLLYLVRL DIC ID+GK  L K+ELN KKYPV+L
Sbjct: 71  HLGEELSDVLLYLVRLADICGIDLGKAVLRKMELNGKKYPVEL 113

[Close]

BLAST of Tan0015473 vs. TAIR 10
Match: AT3G25400.1 (CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). )

HSP 1 Score: 87.8 bits (216), Expect = 5.2e-18
Identity = 42/58 (72.41%), Postives = 48/58 (82.76%), Query Frame = 0


Query: 38  KGEVPRGLPDWKDEEKQNLGEELSNVLLYLVRLVDICRIDVGKVALWKLELNDKKYPV 96
           KGEV RG PDWK+EEK +LGEELS+VLLYLVRL D C +D+GK AL K+ELN  KYPV
Sbjct: 59  KGEVARGCPDWKEEEKVHLGEELSDVLLYLVRLSDACGVDLGKAALRKIELNAIKYPV 116

The following BLAST results are available for this feature:

BLAST of Tan0015473 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32KY6	1.3e-05	44.00	dCTP pyrophosphatase 1 OS=Bos taurus OX=9913 GN=DCTPP1 PE=2 SV=1	[more]
Q91VC0	1.7e-05	38.33	dCTP pyrophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Dctpp1 PE=2 SV=1	[more]
Q9H773	2.9e-05	42.59	dCTP pyrophosphatase 1 OS=Homo sapiens OX=9606 GN=DCTPP1 PE=1 SV=1	[more]
Q9QY93	3.7e-05	38.33	dCTP pyrophosphatase 1 OS=Mus musculus OX=10090 GN=Dctpp1 PE=1 SV=1	[more]

BLAST of Tan0015473 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877931.1	1.2e-19	65.48	dCTP pyrophosphatase 1-like [Benincasa hispida]	[more]
XP_022145107.1	1.5e-19	65.48	dCTP pyrophosphatase 1-like [Momordica charantia]	[more]
XP_022955550.1	3.4e-19	65.48	dCTP pyrophosphatase 1-like [Cucurbita moschata] >KAG6582038.1 dCTP pyrophosphat...	[more]
XP_022979978.1	3.4e-19	65.48	dCTP pyrophosphatase 1-like [Cucurbita maxima]	[more]
XP_008454003.1	5.7e-19	56.31	PREDICTED: dCTP pyrophosphatase 1-like [Cucumis melo] >KAA0044577.1 dCTP pyropho...	[more]

BLAST of Tan0015473 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVJ8	7.3e-20	65.48	dCTP pyrophosphatase 1 OS=Momordica charantia OX=3673 GN=LOC111014625 PE=4 SV=1	[more]
A0A6J1IXV8	1.6e-19	65.48	dCTP pyrophosphatase 1 OS=Cucurbita maxima OX=3661 GN=LOC111479510 PE=4 SV=1	[more]
A0A6J1GVE4	1.6e-19	65.48	dCTP pyrophosphatase 1 OS=Cucurbita moschata OX=3662 GN=LOC111457533 PE=4 SV=1	[more]
A0A5D3D2K4	2.8e-19	56.31	dCTP pyrophosphatase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3BYE4	2.8e-19	56.31	dCTP pyrophosphatase 1 OS=Cucumis melo OX=3656 GN=LOC103494554 PE=4 SV=1	[more]

BLAST of Tan0015473 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25400.1	5.2e-18	72.41	CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (Inte...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.1080		coord: 26..97 e-value: 3.3E-12 score: 48.1
None	No IPR available	PANTHER	PTHR14552	FAMILY NOT NAMED	coord: 36..96
None	No IPR available	PANTHER	PTHR14552:SF25	OS04G0346800 PROTEIN	coord: 36..96
None	No IPR available	SUPERFAMILY	101386	all-alpha NTP pyrophosphatases	coord: 48..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0015473.1	Tan0015473.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009143	nucleoside triphosphate catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0047429	nucleoside-triphosphate diphosphatase activity