Tan0015342 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTATCCAAACCCAATCCAATCTTCCATTTTCTTTCAATCAAGTGTCTTTTTCTCCACCACTTCTTATTTGCACTTCAATTTCTCTGTCCATGTCAAATTCAATCAAACCCAATACGTGATGCCCCAATTCTCCTCAAATCCCCTGTTCTCATCTCCACATTTCTCCCCTATACCTCTCTCCGGATTGGCCACTTCCCATAATCCTCATAACTCTCCACTGCGCCTCTGATTTTTTATAGTCTGTAGTTGAATTCGAAGATTCCAGGAAGTTGGTTCAGATTTCGATTCGGGGGGTTCATCGGTTTTCTTAAATTCTCAGTGGGTTGGATTTACTTTTGACTACTGTTCGTTTGATTTCTCATGGGCTCTTTGCCCTTTTTGTGTTTTGGCTGCTTGATTCTGTATTTAACTTGCTTTTGTGGTTTTCCCTTTTTCGATTTCAGTTTGTGGGTTGAACAAGTTTCTAGTATTGGCCGCCATGGAAGGAGCAGTGGGAGCTGAGTTTCAGGATTGGGAGGTGCTACTCCATGATTCGAAAGCCGAGACTGCCGCTGAATCTTCCGGGGAGAAATCGACCCAGTTTGGTGGAATTGAAGGTGAGTCCGATTCCGATAGCATAATCAAATCCGATTACTTCTCTCTTGATAATCAGGGGCGGCGAGCGAAAACTGTTCCTGAGCGTGATCTTAGCGAAGAGGAGGGTTCGGTTGAATCGGATAATCCTAGTTGGATTGATCCGAGTTCGGAGAATAGGTATGGTCGGGTAAATTCGGGCGAATTATGGTCTGATTCTGGTAGTGATAGGTCTGATGAGCGTAAATTTAACGAATTCGATTCAAAAACTGAGTCTGGAATTGCAGAATTTCTGCAAAGTGACGAGGAAATGTGTGGTAGGATTCAGAAATTGGAGAGTGTAGAGTCTCATGAGAGCAAAATTAGTGGTTCTGATCCCAAACTTGAATTAGCTTTTGAAGAATTTGATGAAATTCAATCCCAAACCAAGGATTTGAACAATTTCTGGTCTGATTCTGGTGGGGATATTGATCAAAGTAGCTCAAAAGTAGTGAAGTTGGAAGAAGAAGGGAAAGAGGATTTGGAGGAGAAAAAGAACCTCCAAATTGAAGAAACAAAAGTCAATGCAGAATCTATCAGTGAAGTTGGAGATAAAAGGAAAGTTGTTTGGTGGAAGGTTCCATTTGAGGTCTTGAAGTATTGCATGTTTAAGGCAAGCCCTGTCTGGTCATTCTCTGTAGCAGCTGCTGTGATGGGTTTCATTATTCTTGGGAGGAAGCTCTACAAAATGAAGAGGAAGAGCCAGAGCTTGCACCTGAAGGTTATTCTGGATGAGAAGGTAAATTCAGTAAGAAATTATACAGCAAAGAAATTAGATGCTGAACTTTTGTTACTGTTTGTTTAAATTTCTTCCTGCTCTTTTGCCTGATGATAACTGTTTTTGTTCTCTGCTGTATGATACTGCTAATTGCTGTACACTGTGAATAAATTCTGGAAGTTGTTGCTTGTTGGGTTTATTTTGCTGCATATTTGTGGTTCTCTTACTTGGTAAAGGTCACAATTTGGATGCAAATTCAGTATTTTTTCTTTATAGTGAAATATGTGATTCAAGTTCAATAGAGCGTCGCTCGGGTTTGTTGTTAGCTTATGTGAGTGGTGATTCGGTTATTTGGATCAGTAGGCTCTGTGCTGGGGCATTGAAATATCCACACCAGCTCCTCCTTATTGATATGCCAAAATGTGAATCAAGTTTAATCCTCTCTGCTGTTAGCTGACTTGCTGTGAACACTTTTTCTTATTGGAGATTTATAGTTGGGGGATTTATTTGTTGGCTTTCTTTTTTGGGAACTTTGTAGCTTAGTTTGGAGGGAAATATTAACTTCCTGTATACCTTAAGAAACCTGGGCAGGAGCCAGTCTGCTTGTTGTGGCTGATATTCAGCGACATAGGGCATTAGTTTACCTCCCCCTTTTCGAGTACTCTTGGGATGTCGATTTTCGACGTCTTTTCGAAACTGAGATTATATTTTTTGACCCTATGAACTAACTATTACTTGCAGAAGGGATCTCTATTCATGAGTCGAGCTGCTCGTCTTAATGAAGCCTTTTCGATTGTGAGACGTGTCCCAATTGTTCGACCCGCTCTCCCTGTTGCTGGGATAAACCCATGGCCGAGCATGAGTTGAGGATCCTTCCCACAACAGATGCAGAAATAATAAAAGTAATAGTGTCTCTCTCTCTCTTTCTATATAAAAGATGTAATATTCTACAGGTTCCAAAATCTATGTTCTGTATCAATACATGATGCTTCGGTATCAGCTGTGTGTAAAGTAAATTCAGATAAAGACTTGTCTCTTTTTTTCTTTTTTCCTTTTTTTTTAAGATATTCCATTTTGTGTTTATATTGATGAATGCAGTTTATGCATGGCTCAAAACACATGTATGGCTGTGTTAAAATCATATTTAATGTATAGATTTGAGCAGAATTATCTAGCAAGG GTTTATCCAAACCCAATCCAATCTTCCATTTTCTTTCAATCAAGTGTCTTTTTCTCCACCACTTCTTATTTGCACTTCAATTTCTCTGTCCATGTCAAATTCAATCAAACCCAATACGTGATGCCCCAATTCTCCTCAAATCCCCTGTTCTCATCTCCACATTTCTCCCCTATACCTCTCTCCGGATTGGCCACTTCCCATAATCCTCATAACTCTCCACTGCGCCTCTGATTTTTTATAGTCTGTAGTTGAATTCGAAGATTCCAGGAAGTTGGTTCAGATTTCGATTCGGGGGGTTCATCGGTTTTCTTAAATTCTCATTTGTGGGTTGAACAAGTTTCTAGTATTGGCCGCCATGGAAGGAGCAGTGGGAGCTGAGTTTCAGGATTGGGAGGTGCTACTCCATGATTCGAAAGCCGAGACTGCCGCTGAATCTTCCGGGGAGAAATCGACCCAGTTTGGTGGAATTGAAGGTGAGTCCGATTCCGATAGCATAATCAAATCCGATTACTTCTCTCTTGATAATCAGGGGCGGCGAGCGAAAACTGTTCCTGAGCGTGATCTTAGCGAAGAGGAGGGTTCGGTTGAATCGGATAATCCTAGTTGGATTGATCCGAGTTCGGAGAATAGGTATGGTCGGGTAAATTCGGGCGAATTATGGTCTGATTCTGGTAGTGATAGGTCTGATGAGCGTAAATTTAACGAATTCGATTCAAAAACTGAGTCTGGAATTGCAGAATTTCTGCAAAGTGACGAGGAAATGTGTGGTAGGATTCAGAAATTGGAGAGTGTAGAGTCTCATGAGAGCAAAATTAGTGGTTCTGATCCCAAACTTGAATTAGCTTTTGAAGAATTTGATGAAATTCAATCCCAAACCAAGGATTTGAACAATTTCTGGTCTGATTCTGGTGGGGATATTGATCAAAGTAGCTCAAAAGTAGTGAAGTTGGAAGAAGAAGGGAAAGAGGATTTGGAGGAGAAAAAGAACCTCCAAATTGAAGAAACAAAAGTCAATGCAGAATCTATCAGTGAAGTTGGAGATAAAAGGAAAGTTGTTTGGTGGAAGGTTCCATTTGAGGTCTTGAAGTATTGCATGTTTAAGGCAAGCCCTGTCTGGTCATTCTCTGTAGCAGCTGCTGTGATGGGTTTCATTATTCTTGGGAGGAAGCTCTACAAAATGAAGAGGAAGAGCCAGAGCTTGCACCTGAAGGTTATTCTGGATGAGAAGAAGGGATCTCTATTCATGAGTCGAGCTGCTCGTCTTAATGAAGCCTTTTCGATTGTGAGACGTGTCCCAATTGTTCGACCCGCTCTCCCTGTTGCTGGGATAAACCCATGGCCGAGCATGAGTTGAGGATCCTTCCCACAACAGATGCAGAAATAATAAAAGTAATAGTGTCTCTCTCTCTCTTTCTATATAAAAGATGTAATATTCTACAGGTTCCAAAATCTATGTTCTGTATCAATACATGATGCTTCGGTATCAGCTGTGTGTAAAGTAAATTCAGATAAAGACTTGTCTCTTTTTTTCTTTTTTCCTTTTTTTTTAAGATATTCCATTTTGTGTTTATATTGATGAATGCAGTTTATGCATGGCTCAAAACACATGTATGGCTGTGTTAAAATCATATTTAATGTATAGATTTGAGCAGAATTATCTAGCAAGG ATGGAAGGAGCAGTGGGAGCTGAGTTTCAGGATTGGGAGGTGCTACTCCATGATTCGAAAGCCGAGACTGCCGCTGAATCTTCCGGGGAGAAATCGACCCAGTTTGGTGGAATTGAAGGTGAGTCCGATTCCGATAGCATAATCAAATCCGATTACTTCTCTCTTGATAATCAGGGGCGGCGAGCGAAAACTGTTCCTGAGCGTGATCTTAGCGAAGAGGAGGGTTCGGTTGAATCGGATAATCCTAGTTGGATTGATCCGAGTTCGGAGAATAGGTATGGTCGGGTAAATTCGGGCGAATTATGGTCTGATTCTGGTAGTGATAGGTCTGATGAGCGTAAATTTAACGAATTCGATTCAAAAACTGAGTCTGGAATTGCAGAATTTCTGCAAAGTGACGAGGAAATGTGTGGTAGGATTCAGAAATTGGAGAGTGTAGAGTCTCATGAGAGCAAAATTAGTGGTTCTGATCCCAAACTTGAATTAGCTTTTGAAGAATTTGATGAAATTCAATCCCAAACCAAGGATTTGAACAATTTCTGGTCTGATTCTGGTGGGGATATTGATCAAAGTAGCTCAAAAGTAGTGAAGTTGGAAGAAGAAGGGAAAGAGGATTTGGAGGAGAAAAAGAACCTCCAAATTGAAGAAACAAAAGTCAATGCAGAATCTATCAGTGAAGTTGGAGATAAAAGGAAAGTTGTTTGGTGGAAGGTTCCATTTGAGGTCTTGAAGTATTGCATGTTTAAGGCAAGCCCTGTCTGGTCATTCTCTGTAGCAGCTGCTGTGATGGGTTTCATTATTCTTGGGAGGAAGCTCTACAAAATGAAGAGGAAGAGCCAGAGCTTGCACCTGAAGGTTATTCTGGATGAGAAGAAGGGATCTCTATTCATGAGTCGAGCTGCTCGTCTTAATGAAGCCTTTTCGATTGTGAGACGTGTCCCAATTGTTCGACCCGCTCTCCCTGTTGCTGGGATAAACCCATGGCCGAGCATGAGTTGA MEGAVGAEFQDWEVLLHDSKAETAAESSGEKSTQFGGIEGESDSDSIIKSDYFSLDNQGRRAKTVPERDLSEEEGSVESDNPSWIDPSSENRYGRVNSGELWSDSGSDRSDERKFNEFDSKTESGIAEFLQSDEEMCGRIQKLESVESHESKISGSDPKLELAFEEFDEIQSQTKDLNNFWSDSGGDIDQSSSKVVKLEEEGKEDLEEKKNLQIEETKVNAESISEVGDKRKVVWWKVPFEVLKYCMFKASPVWSFSVAAAVMGFIILGRKLYKMKRKSQSLHLKVILDEKKGSLFMSRAARLNEAFSIVRRVPIVRPALPVAGINPWPSMS Homology
BLAST of Tan0015342 vs. NCBI nr
Match: KAA0039293.1 (uncharacterized protein E6C27_scaffold64G00870 [Cucumis melo var. makuwa] >TYK00477.1 uncharacterized protein E5676_scaffold169G00850 [Cucumis melo var. makuwa]) HSP 1 Score: 546.6 bits (1407), Expect = 1.5e-151 Identity = 286/335 (85.37%), Postives = 308/335 (91.94%), Query Frame = 0
BLAST of Tan0015342 vs. NCBI nr
Match: XP_008459574.1 (PREDICTED: uncharacterized protein LOC103498665 isoform X1 [Cucumis melo] >XP_008459575.1 PREDICTED: uncharacterized protein LOC103498665 isoform X1 [Cucumis melo]) HSP 1 Score: 546.2 bits (1406), Expect = 2.0e-151 Identity = 286/335 (85.37%), Postives = 307/335 (91.64%), Query Frame = 0
BLAST of Tan0015342 vs. NCBI nr
Match: XP_008459576.1 (PREDICTED: uncharacterized protein LOC103498665 isoform X2 [Cucumis melo]) HSP 1 Score: 539.7 bits (1389), Expect = 1.8e-149 Identity = 285/335 (85.07%), Postives = 306/335 (91.34%), Query Frame = 0
BLAST of Tan0015342 vs. NCBI nr
Match: XP_004141542.1 (uncharacterized protein LOC101203805 [Cucumis sativus] >XP_011656077.1 uncharacterized protein LOC101203805 [Cucumis sativus] >KGN52654.1 hypothetical protein Csa_008195 [Cucumis sativus]) HSP 1 Score: 532.7 bits (1371), Expect = 2.2e-147 Identity = 279/335 (83.28%), Postives = 303/335 (90.45%), Query Frame = 0
BLAST of Tan0015342 vs. NCBI nr
Match: XP_038890604.1 (uncharacterized protein LOC120080116 [Benincasa hispida] >XP_038890605.1 uncharacterized protein LOC120080116 [Benincasa hispida] >XP_038890606.1 uncharacterized protein LOC120080116 [Benincasa hispida]) HSP 1 Score: 532.3 bits (1370), Expect = 2.9e-147 Identity = 281/332 (84.64%), Postives = 301/332 (90.66%), Query Frame = 0
BLAST of Tan0015342 vs. ExPASy TrEMBL
Match: A0A5D3BMQ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00850 PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 7.2e-152 Identity = 286/335 (85.37%), Postives = 308/335 (91.94%), Query Frame = 0
BLAST of Tan0015342 vs. ExPASy TrEMBL
Match: A0A1S3CAH9 (uncharacterized protein LOC103498665 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498665 PE=4 SV=1) HSP 1 Score: 546.2 bits (1406), Expect = 9.5e-152 Identity = 286/335 (85.37%), Postives = 307/335 (91.64%), Query Frame = 0
BLAST of Tan0015342 vs. ExPASy TrEMBL
Match: A0A1S3CBR2 (uncharacterized protein LOC103498665 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498665 PE=4 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 8.8e-150 Identity = 285/335 (85.07%), Postives = 306/335 (91.34%), Query Frame = 0
BLAST of Tan0015342 vs. ExPASy TrEMBL
Match: A0A0A0KUS6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G648750 PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 1.1e-147 Identity = 279/335 (83.28%), Postives = 303/335 (90.45%), Query Frame = 0
BLAST of Tan0015342 vs. ExPASy TrEMBL
Match: A0A6J1CK14 (uncharacterized protein LOC111012140 OS=Momordica charantia OX=3673 GN=LOC111012140 PE=4 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 1.1e-139 Identity = 273/338 (80.77%), Postives = 298/338 (88.17%), Query Frame = 0
BLAST of Tan0015342 vs. TAIR 10
Match: AT4G13530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 169.5 bits (428), Expect = 4.6e-42 Identity = 120/333 (36.04%), Postives = 180/333 (54.05%), Query Frame = 0
BLAST of Tan0015342 vs. TAIR 10
Match: AT4G13530.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10080.1); Has 70 Blast hits to 69 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 167.2 bits (422), Expect = 2.3e-41 Identity = 119/333 (35.74%), Postives = 179/333 (53.75%), Query Frame = 0
BLAST of Tan0015342 vs. TAIR 10
Match: AT4G10080.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13530.1); Has 120 Blast hits to 114 proteins in 21 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 12; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 135.2 bits (339), Expect = 9.7e-32 Identity = 110/336 (32.74%), Postives = 167/336 (49.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|