Tan0014889 (gene) Snake gourd v1

Overview


Name	Tan0014889
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	cyclin-dependent protein kinase inhibitor SMR1-like
Location	LG04: 5611157 .. 5611952 (-)
RNA-Seq Expression	Tan0014889
Synteny	Tan0014889

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCACAGGCCTCGATCTCCGACGCACTTTGCTCGAAATCGTCCGCCGTCCGGCGATCAAGCTTCAAATTCCACGCCCGATGTCAATGGCGGCCGATCACGGCGGCGTAATTCAGAAAGAGATCAGAATCGACGGCGCCGCTGAAGAATTGTGCTGCCGCACGCCTACTTCCGCAGAGAACAAGATTCCGGAGGTGCTGCAATGTCCGCCGGCGCCGCGGAAGCGGAAGAGACCTCCGACTTGTAGAAGAAGACTAATCGAGCTTGAATTCGTGGAGATCGTGAATAGAGAAGAGATCGAACCGTATTTAACTTCGAGTTTCGAGCACGAAGACAGAGTTAAAAAATCCGCTAAAAGAAGCTTCTGCGAGTGTAAATGATAAATATAATCCGATTATTTCACCAATCGCCATTGTTAACGAGCTTGTTCTTTTTTTTTTGTTTCTAATTCTTTTCTTCTTCTTCTTCTCACCTTCAATTCTGTGAGAGAATATTAATTGTTGTTAATGTAAAACGAAAATTAATCACACGTTCAATGTACGTAAGCCGATTTAATTTTCTGTCCAGATCTGAATCCGAATTCGATCAAACTATAACTGAATTCACAAATTCTGAATGTGTTTCACGAAATTGAATATGTTCGTTTTTGGAACTCTCTTGACTTTTTTAGATGCGATTGATAAGCATATGGGGAAGAAGATGAGAAAGCGAAAGGGCAAATTCTGGTTGTTACGTAATTTCGATAAGATGCTGGCTGATCTGTCTGGTAGTTTTGACATTTTTCGTGTTGAGTGA

mRNA sequence

ATGTCCACAGGCCTCGATCTCCGACGCACTTTGCTCGAAATCGTCCGCCGTCCGGCGATCAAGCTTCAAATTCCACGCCCGATGTCAATGGCGGCCGATCACGGCGGCGTAATTCAGAAAGAGATCAGAATCGACGGCGCCGCTGAAGAATTGTGCTGCCGCACGCCTACTTCCGCAGAGAACAAGATTCCGGAGGTGCTGCAATGTCCGCCGGCGCCGCGGAAGCGGAAGAGACCTCCGACTTGTAGAAGAAGACTAATCGAGCTTGAATTCGTGGAGATCGTGAATAGAGAAGAGATCGAACCGTATTTAACTTCGAGTTTCGAGCACGAAGACAGAGTTAAAAAATCCGCTAAAAGAAGCTTCTGCGACCGATTTAATTTTCTGTCCAGATCTGAATCCGAATTCGATCAAACTATAACTGAATTCACAAATTCTGAATATGCGATTGATAAGCATATGGGGAAGAAGATGAGAAAGCGAAAGGGCAAATTCTGGTTGTTACGTAATTTCGATAAGATGCTGGCTGATCTGTCTGGTAGTTTTGACATTTTTCGTGTTGAGTGA

Coding sequence (CDS)

ATGTCCACAGGCCTCGATCTCCGACGCACTTTGCTCGAAATCGTCCGCCGTCCGGCGATCAAGCTTCAAATTCCACGCCCGATGTCAATGGCGGCCGATCACGGCGGCGTAATTCAGAAAGAGATCAGAATCGACGGCGCCGCTGAAGAATTGTGCTGCCGCACGCCTACTTCCGCAGAGAACAAGATTCCGGAGGTGCTGCAATGTCCGCCGGCGCCGCGGAAGCGGAAGAGACCTCCGACTTGTAGAAGAAGACTAATCGAGCTTGAATTCGTGGAGATCGTGAATAGAGAAGAGATCGAACCGTATTTAACTTCGAGTTTCGAGCACGAAGACAGAGTTAAAAAATCCGCTAAAAGAAGCTTCTGCGACCGATTTAATTTTCTGTCCAGATCTGAATCCGAATTCGATCAAACTATAACTGAATTCACAAATTCTGAATATGCGATTGATAAGCATATGGGGAAGAAGATGAGAAAGCGAAAGGGCAAATTCTGGTTGTTACGTAATTTCGATAAGATGCTGGCTGATCTGTCTGGTAGTTTTGACATTTTTCGTGTTGAGTGA

Protein sequence

MSTGLDLRRTLLEIVRRPAIKLQIPRPMSMAADHGGVIQKEIRIDGAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTSSFEHEDRVKKSAKRSFCDRFNFLSRSESEFDQTITEFTNSEYAIDKHMGKKMRKRKGKFWLLRNFDKMLADLSGSFDIFRVE

Homology

[Close]

BLAST of Tan0014889 vs. ExPASy Swiss-Prot
Match: Q9LPP4 (Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana OX=3702 GN=SMR1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.3e-06
Identity = 36/119 (30.25%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 21  KLQIPRPMSMAADHGGVIQKEIRIDGAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPP 80
           K   P P+ + +       K+   D   ++L C TPTS E+KIP V+  PP P ++ RPP
Sbjct: 11  KFNFPTPIKIRSKTSKT--KKDEGDDDEDDLRCSTPTSQEHKIPAVVDSPPPPPRKPRPP 70

Query: 81  -------------TCRRRLIELEFVEIVNREEIEPYLTSSF-EHEDRVKKSAKRSFCDR 126
                        +C+R+L+      I+NREEI+ + +S + E     K+     +C R
Sbjct: 71  PSAPSATAALMIRSCKRKLLVSTCEIIMNREEIDRFFSSVYNETSTTAKRRRSYPYCSR 127

[Close]

BLAST of Tan0014889 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.5e-05
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 0


Query: 49 EELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLI 88
          EE C  TPT+ E KIPE+L+CPPAPRKR+    CR  ++
Sbjct: 56 EEECSTTPTAKETKIPELLECPPAPRKRRPALKCRSNVV 94

[Close]

BLAST of Tan0014889 vs. NCBI nr
Match: XP_023531359.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-50
Identity = 108/128 (84.38%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MSTGLDLRRTLLEIVRRPAIKLQIPRPM-SMAADHGGVI---QKEIRIDGAAEELCCRTP 60
           MST LDLRRTLLE+VRRPAIKLQIPRP+ SMAADHGGVI   ++  +IDG AEELCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERNDKIDGGAEELCCRTP 60

Query: 61  TSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTSSFEHEDRVKK 120
           TSAENKIP VLQCPPAPRKRKRPPTCRRRLIELEFVEIV+REEIEPY TSSF+HE+RVKK
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCD 125
           SAK SFC+
Sbjct: 121 SAKISFCE 128

[Close]

BLAST of Tan0014889 vs. NCBI nr
Match: XP_022957068.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata] >KAG6601198.1 hypothetical protein SDJN03_06431, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031993.1 hypothetical protein SDJN02_06035, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.9 bits (533), Expect = 1.9e-50
Identity = 111/128 (86.72%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MSTGLDLRRTLLEIVRRPAIKLQIPRPM-SMAADHGGV-IQKE--IRIDGAAEELCCRTP 60
           MST LDLRRTLLE+VRRPAIKLQIPRP+ SMAADHGGV IQKE    IDG AEELCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTP 60

Query: 61  TSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTSSFEHEDRVKK 120
           TSAENKIP VLQCPPAPRKRKRPPTCRRRLIELEFVEIV+REEIEPY TSSF+HE+RVKK
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCD 125
           SAK SFC+
Sbjct: 121 SAKISFCE 128

[Close]

BLAST of Tan0014889 vs. NCBI nr
Match: XP_022992922.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima])

HSP 1 Score: 207.6 bits (527), Expect = 9.3e-50
Identity = 110/128 (85.94%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MSTGLDLRRTLLEIVRRPAIKLQIPRPM-SMAADHGGV-IQKE--IRIDGAAEELCCRTP 60
           MST LDLRRTLLE+VRRPAIKLQIPRP+ SMAADHGGV IQKE    IDG  EELCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGDEELCCRTP 60

Query: 61  TSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTSSFEHEDRVKK 120
           TSAENKIP VLQCPPAPRKRKRPPTCRRRLIELEFVEIV+REEIEPY TSSF+HE+RVKK
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCD 125
           SAK SFC+
Sbjct: 121 SAKISFCE 128

[Close]

BLAST of Tan0014889 vs. NCBI nr
Match: XP_038893025.1 (cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida])

HSP 1 Score: 202.2 bits (513), Expect = 3.9e-48
Identity = 103/125 (82.40%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 1   MSTGLDLRRTLLEIVRRPAIKLQIPRP-MSMAADHGGVIQKEIRIDGAAEELCCRTPTSA 60
           MST LDLRRTLLEIVRRP IKLQIP P  SMA DHGGVI ++ RI    EELCCRTPTSA
Sbjct: 1   MSTDLDLRRTLLEIVRRPPIKLQIPLPSTSMAGDHGGVIIQKDRITDEEEELCCRTPTSA 60

Query: 61  ENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTSSFEHEDRVKKSAK 120
           ENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIVNREEIEPYL SSF+HEDRV+KSAK
Sbjct: 61  ENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLRSSFDHEDRVRKSAK 120

Query: 121 RSFCD 125
           RSFC+
Sbjct: 121 RSFCE 125

[Close]

BLAST of Tan0014889 vs. NCBI nr
Match: XP_008446800.1 (PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo] >KAA0034681.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo var. makuwa] >TYK09232.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 1.8e-45
Identity = 100/131 (76.34%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MSTGLDLRRTLLEIVRRPAIKLQIPRPMS---MAADHGGVIQKEIRI----DGAAEELCC 60
           MST LDLRRTLLEIVRRP IKLQIP P +   M  D GGVI ++ RI    DG AEELCC
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPLPSTAVVMGGDRGGVIIQKDRIDKGEDGGAEELCC 60

Query: 61  RTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTSSFEHEDR 120
           RTPTSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIV+R+EIEPYL +SF+HEDR
Sbjct: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNASFDHEDR 120

Query: 121 VKKSAKRSFCD 125
           V+KSAKRSFC+
Sbjct: 121 VRKSAKRSFCE 131

[Close]

BLAST of Tan0014889 vs. ExPASy TrEMBL
Match: A0A6J1GZ63 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita moschata OX=3662 GN=LOC111458554 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 9.1e-51
Identity = 111/128 (86.72%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MSTGLDLRRTLLEIVRRPAIKLQIPRPM-SMAADHGGV-IQKE--IRIDGAAEELCCRTP 60
           MST LDLRRTLLE+VRRPAIKLQIPRP+ SMAADHGGV IQKE    IDG AEELCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTP 60

Query: 61  TSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTSSFEHEDRVKK 120
           TSAENKIP VLQCPPAPRKRKRPPTCRRRLIELEFVEIV+REEIEPY TSSF+HE+RVKK
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCD 125
           SAK SFC+
Sbjct: 121 SAKISFCE 128

[Close]

BLAST of Tan0014889 vs. ExPASy TrEMBL
Match: A0A6J1JRA3 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita maxima OX=3661 GN=LOC111489107 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 4.5e-50
Identity = 110/128 (85.94%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MSTGLDLRRTLLEIVRRPAIKLQIPRPM-SMAADHGGV-IQKE--IRIDGAAEELCCRTP 60
           MST LDLRRTLLE+VRRPAIKLQIPRP+ SMAADHGGV IQKE    IDG  EELCCRTP
Sbjct: 1   MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGDEELCCRTP 60

Query: 61  TSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTSSFEHEDRVKK 120
           TSAENKIP VLQCPPAPRKRKRPPTCRRRLIELEFVEIV+REEIEPY TSSF+HE+RVKK
Sbjct: 61  TSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK 120

Query: 121 SAKRSFCD 125
           SAK SFC+
Sbjct: 121 SAKISFCE 128

[Close]

BLAST of Tan0014889 vs. ExPASy TrEMBL
Match: A0A5D3CD68 (Cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002260 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 8.8e-46
Identity = 100/131 (76.34%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MSTGLDLRRTLLEIVRRPAIKLQIPRPMS---MAADHGGVIQKEIRI----DGAAEELCC 60
           MST LDLRRTLLEIVRRP IKLQIP P +   M  D GGVI ++ RI    DG AEELCC
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPLPSTAVVMGGDRGGVIIQKDRIDKGEDGGAEELCC 60

Query: 61  RTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTSSFEHEDR 120
           RTPTSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIV+R+EIEPYL +SF+HEDR
Sbjct: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNASFDHEDR 120

Query: 121 VKKSAKRSFCD 125
           V+KSAKRSFC+
Sbjct: 121 VRKSAKRSFCE 131

[Close]

BLAST of Tan0014889 vs. ExPASy TrEMBL
Match: A0A1S3BFF9 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo OX=3656 GN=LOC103489420 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 8.8e-46
Identity = 100/131 (76.34%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MSTGLDLRRTLLEIVRRPAIKLQIPRPMS---MAADHGGVIQKEIRI----DGAAEELCC 60
           MST LDLRRTLLEIVRRP IKLQIP P +   M  D GGVI ++ RI    DG AEELCC
Sbjct: 1   MSTELDLRRTLLEIVRRPPIKLQIPLPSTAVVMGGDRGGVIIQKDRIDKGEDGGAEELCC 60

Query: 61  RTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTSSFEHEDR 120
           RTPTSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIV+R+EIEPYL +SF+HEDR
Sbjct: 61  RTPTSAENKIPAVVQCPPAPRKRKRPPSCRRRLMELEFVEIVHRDEIEPYLNASFDHEDR 120

Query: 121 VKKSAKRSFCD 125
           V+KSAKRSFC+
Sbjct: 121 VRKSAKRSFCE 131

[Close]

BLAST of Tan0014889 vs. ExPASy TrEMBL
Match: A0A6J1HSZ5 (cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita maxima OX=3661 GN=LOC111467503 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.3e-44
Identity = 98/133 (73.68%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 1   MSTGLDLRRTLLEIVRRPAIKLQIPRPMSMAADHGGVIQKEIRIDGAA---------EEL 60
           MSTGLDLRRT LE VRRP + L IPRP S A DH   IQK+  ID  A         EEL
Sbjct: 1   MSTGLDLRRTFLETVRRPDLNLPIPRPSSSAPDHSDTIQKQ-SIDTTATASSAAAEEEEL 60

Query: 61  CCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLIELEFVEIVNREEIEPYLTSSFEHE 120
           CCRTPTSAENKIP +LQCPPAPRKRKRPP+CRRRL+ELEFV+IVNRE+IEPYL SSFEHE
Sbjct: 61  CCRTPTSAENKIPALLQCPPAPRKRKRPPSCRRRLMELEFVQIVNREDIEPYLNSSFEHE 120

Query: 121 DRVKKSAKRSFCD 125
           DRV+KSAKRSFC+
Sbjct: 121 DRVRKSAKRSFCE 132

[Close]

BLAST of Tan0014889 vs. TAIR 10
Match: AT3G10525.1 (LOSS OF GIANT CELLS FROM ORGANS )

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-07
Identity = 36/119 (30.25%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 21  KLQIPRPMSMAADHGGVIQKEIRIDGAAEELCCRTPTSAENKIPEVLQCPPAPRKRKRPP 80
           K   P P+ + +       K+   D   ++L C TPTS E+KIP V+  PP P ++ RPP
Sbjct: 11  KFNFPTPIKIRSKTSKT--KKDEGDDDEDDLRCSTPTSQEHKIPAVVDSPPPPPRKPRPP 70

Query: 81  -------------TCRRRLIELEFVEIVNREEIEPYLTSSF-EHEDRVKKSAKRSFCDR 126
                        +C+R+L+      I+NREEI+ + +S + E     K+     +C R
Sbjct: 71  PSAPSATAALMIRSCKRKLLVSTCEIIMNREEIDRFFSSVYNETSTTAKRRRSYPYCSR 127

[Close]

BLAST of Tan0014889 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.8e-06
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 0


Query: 49 EELCCRTPTSAENKIPEVLQCPPAPRKRKRPPTCRRRLI 88
          EE C  TPT+ E KIPE+L+CPPAPRKR+    CR  ++
Sbjct: 56 EEECSTTPTAKETKIPELLECPPAPRKRRPALKCRSNVV 94

[Close]

BLAST of Tan0014889 vs. TAIR 10
Match: AT5G02420.1 (unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 7.5e-05
Identity = 35/79 (44.30%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 49  EELCCRTPTSAENKIPEV--LQCPPAPRKRK--RPPTCRRRLIELEFVEIVNREEIEPYL 108
           EE  C+TPTS+++KIPEV    CPPAPRK K  R    +R+L     V +VNR  I+   
Sbjct: 40  EEEGCKTPTSSDHKIPEVKYTLCPPAPRKPKPNRSSGTKRKLTP---VNVVNRIPIDLSR 99

Query: 109 TSSFEHED---RVKKSAKR 121
                 ED   R+KKS K+
Sbjct: 100 EIEMFFEDLDRRIKKSRKQ 115

[Close]

BLAST of Tan0014889 vs. TAIR 10
Match: AT1G08180.1 (unknown protein; Has 53 Blast hits to 53 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.8e-04
Identity = 41/116 (35.34%), Postives = 56/116 (48.28%), Query Frame = 0


Query: 11  LLEIVRRPAIKLQIPRPMSMAADHGGVIQKEIRIDGAAEELCCRTPTSAENKIPEVLQCP 70
           LLE +       Q PR      DH    +KE  +    E LC  TPTS+++KIPEV  CP
Sbjct: 4   LLETLEEEKTVEQKPRSQE-EEDHQDSSKKEELL----ESLC--TPTSSDHKIPEVETCP 63

Query: 71  PAPRKRKRPPTCRRRL---IELEFVEI--VNREEIEPYLTSSFEHEDRVKKSAKRS 122
           P PRKR R  +  ++     +L F E   V  +E+E    + F HE    +  +RS
Sbjct: 64  PPPRKRPREISLTKKTRLSKDLRFFEATDVGSQEVE----TLFVHEPNHVRKKRRS 108

The following BLAST results are available for this feature:

BLAST of Tan0014889 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPP4	2.3e-06	30.25	Cyclin-dependent protein kinase inhibitor SMR1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q29Q81	2.5e-05	56.41	Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Tan0014889 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023531359.1	1.1e-50	84.38	cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022957068.1	1.9e-50	86.72	cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata] >KAG660...	[more]
XP_022992922.1	9.3e-50	85.94	cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]	[more]
XP_038893025.1	3.9e-48	82.40	cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]	[more]
XP_008446800.1	1.8e-45	76.34	PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo] >K...	[more]

BLAST of Tan0014889 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZ63	9.1e-51	86.72	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1JRA3	4.5e-50	85.94	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A5D3CD68	8.8e-46	76.34	Cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BFF9	8.8e-46	76.34	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1HSZ5	1.3e-44	73.68	cyclin-dependent protein kinase inhibitor SMR1-like OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of Tan0014889 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10525.1	1.6e-07	30.25	LOSS OF GIANT CELLS FROM ORGANS	[more]
AT5G40460.1	1.8e-06	56.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G02420.1	7.5e-05	44.30	unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bac...	[more]
AT1G08180.1	2.8e-04	35.34	unknown protein; Has 53 Blast hits to 53 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 23..121
None	No IPR available	PANTHER	PTHR33142:SF57	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR1-LIKE	coord: 23..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0014889.1	Tan0014889.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus