Tan0014644 (gene) Snake gourd v1

Overview


Name	Tan0014644
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Calcium-binding EF-hand family protein
Location	LG01: 113937912 .. 113938264 (+)
RNA-Seq Expression	Tan0014644
Synteny	Tan0014644

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAATCAAAAGAATCACAAAACAAAAATACAAGAAACAGATTGGACGGCGATCGATGGCAAGGAAAAGCAAGATGTACCAGCAGCAGAGGCCGAAGCTATCTCGAGAGCAACTCAGCCTAATCTTCAGAAACCACGACGGCGATGGTGACGGCCGCCTGAGCGCCACCGAGCTCACCCAAGCTTTTCGGTATATCGGTGCCCTTATGCCGTCGTACAGAGCTCAACACGCTCTTCTTCACGCAGATTCCGACAGAGATGGATTTATCGGCGAGAAGGATTTTGAATTGCTTGTTAATTATGCTGAAAAACGAAAGTACACTATCATTTGAATTTTGAATTTTGAATTTTT

mRNA sequence

GAAAAAATCAAAAGAATCACAAAACAAAAATACAAGAAACAGATTGGACGGCGATCGATGGCAAGGAAAAGCAAGATGTACCAGCAGCAGAGGCCGAAGCTATCTCGAGAGCAACTCAGCCTAATCTTCAGAAACCACGACGGCGATGGTGACGGCCGCCTGAGCGCCACCGAGCTCACCCAAGCTTTTCGGTATATCGGTGCCCTTATGCCGTCGTACAGAGCTCAACACGCTCTTCTTCACGCAGATTCCGACAGAGATGGATTTATCGGCGAGAAGGATTTTGAATTGCTTGTTAATTATGCTGAAAAACGAAAGTACACTATCATTTGAATTTTGAATTTTGAATTTTT

Coding sequence (CDS)

ATGGCAAGGAAAAGCAAGATGTACCAGCAGCAGAGGCCGAAGCTATCTCGAGAGCAACTCAGCCTAATCTTCAGAAACCACGACGGCGATGGTGACGGCCGCCTGAGCGCCACCGAGCTCACCCAAGCTTTTCGGTATATCGGTGCCCTTATGCCGTCGTACAGAGCTCAACACGCTCTTCTTCACGCAGATTCCGACAGAGATGGATTTATCGGCGAGAAGGATTTTGAATTGCTTGTTAATTATGCTGAAAAACGAAAGTACACTATCATTTGA

Protein sequence

MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELLVNYAEKRKYTII

Homology

[Close]

BLAST of Tan0014644 vs. ExPASy Swiss-Prot
Match: Q8L3R2 (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-06
Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 16  SREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKD 75
           S+E+L  +F + D DGDG++SA EL   F  +G  +    AQ A+   D+D DG +G +D
Sbjct: 61  SKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFED 120

Query: 76  F 77
           F
Sbjct: 121 F 121

[Close]

BLAST of Tan0014644 vs. ExPASy Swiss-Prot
Match: Q0DJV6 (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-05
Identity = 22/58 (37.93%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 19 QLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDF 77
          +L  +FR +D +GDG++SA EL    R +GA +     +  +   DSDRDGF+   +F
Sbjct: 5  ELEQVFRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEF 62

[Close]

BLAST of Tan0014644 vs. ExPASy Swiss-Prot
Match: Q6L4D4 (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 GN=CML15 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-05
Identity = 23/65 (35.38%), Postives = 34/65 (52.31%), Query Frame = 0


Query: 12  RPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFI 71
           RP  + ++   +FR  D +GDGR+S  EL   FR +G  +        +  ADSD DG+I
Sbjct: 48  RPPAAEDETERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYI 107

Query: 72  GEKDF 77
              +F
Sbjct: 108 SLGEF 112

[Close]

BLAST of Tan0014644 vs. ExPASy Swiss-Prot
Match: Q39419 (Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 3.5e-05
Identity = 24/63 (38.10%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 14 KLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGE 73
          K  RE+   IF+  D +GDG++SA EL +A + +G++ P    +H +   D+D DGFI  
Sbjct: 9  KAERER---IFKRFDANGDGKISAAELGEALKTLGSITPD-EVKHMMAEIDTDGDGFISF 67

Query: 74 KDF 77
          ++F
Sbjct: 69 QEF 67

[Close]

BLAST of Tan0014644 vs. ExPASy Swiss-Prot
Match: Q8RYJ9 (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 GN=CML23 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.0e-04
Identity = 25/71 (35.21%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 15 LSREQLSLIFRNHDGDGDGRLSATELTQAFR-YIGALMPSYRAQHALLHADSDRDGFIGE 74
          ++ ++   +F + D DGDG++SATEL    +  +G  MP    Q  +  AD+D DG + E
Sbjct: 2  VASDEFRRVFGSFDQDGDGKISATELRLCVKASLGEDMPDEEVQALMALADTDGDGLLDE 61

Query: 75 KDFELLVNYAE 85
          ++F  LV   E
Sbjct: 62 EEFVRLVTEME 72

[Close]

BLAST of Tan0014644 vs. NCBI nr
Match: KAG7024248.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157.5 bits (397), Expect = 5.4e-35
Identity = 79/91 (86.81%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 1  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHAL 60
          MARKSK Y Q RPKLSREQLS+IFRNHDGDGDGRLS TELT AFRYIGA +PSYRA HAL
Sbjct: 1  MARKSKTY-QPRPKLSREQLSVIFRNHDGDGDGRLSTTELTAAFRYIGAFLPSYRALHAL 60

Query: 61 LHADSDRDGFIGEKDFELLVNYAEKRKYTII 92
          LH DSD DGFIGEKDFELLVNYAEKRKYT+I
Sbjct: 61 LHTDSDGDGFIGEKDFELLVNYAEKRKYTVI 90

[Close]

BLAST of Tan0014644 vs. NCBI nr
Match: KAG6591370.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155.2 bits (391), Expect = 2.7e-34
Identity = 78/89 (87.64%), Postives = 80/89 (89.89%), Query Frame = 0


Query: 1  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHAL 60
          MARKSK Y Q RPKLSREQLS+IFRNHDGDGDGRLS TELT AFRYIGA +PSYRA HAL
Sbjct: 1  MARKSKTY-QPRPKLSREQLSVIFRNHDGDGDGRLSTTELTAAFRYIGAFLPSYRALHAL 60

Query: 61 LHADSDRDGFIGEKDFELLVNYAEKRKYT 90
          LH DSD DGFIGEKDFELLVNYAEKRKYT
Sbjct: 61 LHTDSDGDGFIGEKDFELLVNYAEKRKYT 88

[Close]

BLAST of Tan0014644 vs. NCBI nr
Match: KAG6608481.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037808.1 putative calcium-binding protein CML41, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.0 bits (380), Expect = 5.0e-33
Identity = 75/91 (82.42%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHAL 60
          MARK+KM  Q RPKLSREQLS+IFRNHDGDGDGRLSATELT+AFRYIGA +PSYRA HAL
Sbjct: 1  MARKNKM-SQPRPKLSREQLSVIFRNHDGDGDGRLSATELTEAFRYIGAFLPSYRAHHAL 60

Query: 61 LHADSDRDGFIGEKDFELLVNYAEKRKYTII 92
           + DSDRDGFIGEKDFE LVNY EKR YTI+
Sbjct: 61 RYTDSDRDGFIGEKDFESLVNYTEKRHYTIV 90

[Close]

BLAST of Tan0014644 vs. NCBI nr
Match: KGN55185.1 (hypothetical protein Csa_012915 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 4.7e-31
Identity = 73/91 (80.22%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 1  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHAL 60
          M+RKSK Y   R KLSREQL LIFRNHD D DGRLS TELT+AFRYIGA +P+YRA+HAL
Sbjct: 1  MSRKSKNY-YPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHAL 60

Query: 61 LHADSDRDGFIGEKDFELLVNYAEKRKYTII 92
          LHADSDRDGFIGEKDFE LVNYAE+R+YTII
Sbjct: 61 LHADSDRDGFIGEKDFESLVNYAEQRQYTII 90

[Close]

BLAST of Tan0014644 vs. NCBI nr
Match: KAA0064376.1 (putative calcium-binding protein CML27 [Cucumis melo var. makuwa] >TYK20211.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa])

HSP 1 Score: 140.2 bits (352), Expect = 8.8e-30
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHAL 60
          M+R+SK Y   R +LSREQL LIFRNHD D DGRLS TELT+AFRYIGA +P YRA+HAL
Sbjct: 1  MSRRSKTY-HPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHAL 60

Query: 61 LHADSDRDGFIGEKDFELLVNYAEKRKYTII 92
           HADSDRDGFI EKDFELLVNYAE+R+YT+I
Sbjct: 61 FHADSDRDGFISEKDFELLVNYAEQRQYTVI 90

[Close]

BLAST of Tan0014644 vs. ExPASy TrEMBL
Match: A0A0A0KZR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.3e-31
Identity = 73/91 (80.22%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 1  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHAL 60
          M+RKSK Y   R KLSREQL LIFRNHD D DGRLS TELT+AFRYIGA +P+YRA+HAL
Sbjct: 1  MSRKSKNY-YPRAKLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPTYRARHAL 60

Query: 61 LHADSDRDGFIGEKDFELLVNYAEKRKYTII 92
          LHADSDRDGFIGEKDFE LVNYAE+R+YTII
Sbjct: 61 LHADSDRDGFIGEKDFESLVNYAEQRQYTII 90

[Close]

BLAST of Tan0014644 vs. ExPASy TrEMBL
Match: A0A5A7VDB9 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003480 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.3e-30
Identity = 69/91 (75.82%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHAL 60
          M+R+SK Y   R +LSREQL LIFRNHD D DGRLS TELT+AFRYIGA +P YRA+HAL
Sbjct: 1  MSRRSKTY-HPRARLSREQLLLIFRNHDSDKDGRLSTTELTEAFRYIGAFLPPYRARHAL 60

Query: 61 LHADSDRDGFIGEKDFELLVNYAEKRKYTII 92
           HADSDRDGFI EKDFELLVNYAE+R+YT+I
Sbjct: 61 FHADSDRDGFISEKDFELLVNYAEQRQYTVI 90

[Close]

BLAST of Tan0014644 vs. ExPASy TrEMBL
Match: A0A5N6RQV2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018544 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 45/90 (50.00%), Postives = 61/90 (67.78%), Query Frame = 0


Query: 1  MARKSKMYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHAL 60
          M +   M++      +R+QL  IFR+HD DGDG+LS  E+  AF Y+G+   SYRA  AL
Sbjct: 1  MRKNVTMFKPVSVSFTRDQLMNIFRSHDLDGDGKLSRKEVKAAFGYLGSRWDSYRAVLAL 60

Query: 61 LHADSDRDGFIGEKDFELLVNYAEKRKYTI 91
          LHADSD DG++GE++ + LV+YA K  YTI
Sbjct: 61 LHADSDHDGYVGEEELKKLVDYALKCGYTI 90

[Close]

BLAST of Tan0014644 vs. ExPASy TrEMBL
Match: A5AWP8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023174 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.6e-13
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 15 LSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEK 74
          L  +QL  IF+ HD +GDG+L+  EL QAF+++GAL+P +RA  AL HAD+D DG I EK
Sbjct: 15 LPEQQLKKIFKQHDTNGDGQLNKAELKQAFQHLGALIPGWRAHRALHHADTDGDGCISEK 74

Query: 75 DFELLVNYAEKRKYTI 91
          + + LV YA K  YTI
Sbjct: 75 EMKDLVEYAAKFGYTI 90

[Close]

BLAST of Tan0014644 vs. ExPASy TrEMBL
Match: A0A6J1KUW2 (calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.8e-13
Identity = 38/72 (52.78%), Postives = 53/72 (73.61%), Query Frame = 0


Query: 14  KLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGE 73
           KLSR Q+  IF  HD DGDG LS +ELT+AF + G+++P Y+A + L +AD+D DG I E
Sbjct: 84  KLSRSQIKEIFMEHDIDGDGYLSVSELTKAFSFFGSIIPLYKAHYGLAYADADGDGLISE 143

Query: 74  KDFELLVNYAEK 86
           ++ E LV+YAE+
Sbjct: 144 EELEKLVDYAER 155

[Close]

BLAST of Tan0014644 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 )

HSP 1 Score: 53.5 bits (127), Expect = 1.0e-07
Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 16  SREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKD 75
           S+E+L  +F + D DGDG++SA EL   F  +G  +    AQ A+   D+D DG +G +D
Sbjct: 61  SKEELRQVFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFED 120

Query: 76  F 77
           F
Sbjct: 121 F 121

[Close]

BLAST of Tan0014644 vs. TAIR 10
Match: AT3G51920.1 (calmodulin 9 )

HSP 1 Score: 45.8 bits (107), Expect = 2.1e-05
Identity = 23/74 (31.08%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 7   MYQQQRPKLSREQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSD 66
           M Q    + + ++L  +FR  D DGDG +S  EL +  + +G  + +  A+H +  AD D
Sbjct: 73  MAQNTSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLD 132

Query: 67  RDGFIGEKDFELLV 81
            DGF+   +F  ++
Sbjct: 133 GDGFLSFHEFSKMM 146

[Close]

BLAST of Tan0014644 vs. TAIR 10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 45.4 bits (106), Expect = 2.8e-05
Identity = 22/61 (36.07%), Postives = 35/61 (57.38%), Query Frame = 0


Query: 20 LSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFELL 79
          L  +F   D + DGR+SA EL ++F+ +G  M    A+ A+  +D D DG +   +F LL
Sbjct: 23 LEAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALL 82

Query: 80 V 81
          +
Sbjct: 83 I 83

[Close]

BLAST of Tan0014644 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05
Identity = 21/62 (33.87%), Postives = 31/62 (50.00%), Query Frame = 0


Query: 18 EQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFE 77
          E+L  +F   D +GDG++S  EL   F+ +G           L   D+DRDG+I   +F 
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 78 LL 80
           L
Sbjct: 82 TL 83

[Close]

BLAST of Tan0014644 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05
Identity = 21/62 (33.87%), Postives = 31/62 (50.00%), Query Frame = 0


Query: 18 EQLSLIFRNHDGDGDGRLSATELTQAFRYIGALMPSYRAQHALLHADSDRDGFIGEKDFE 77
          E+L  +F   D +GDG++S  EL   F+ +G           L   D+DRDG+I   +F 
Sbjct: 22 EELKKVFDQFDSNGDGKISVLELGGVFKAMGTSYTETELNRVLEEVDTDRDGYINLDEFS 81

Query: 78 LL 80
           L
Sbjct: 82 TL 83

The following BLAST results are available for this feature:

BLAST of Tan0014644 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3R2	1.4e-06	40.98	Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 ...	[more]
Q0DJV6	1.2e-05	37.93	Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6L4D4	1.6e-05	35.38	Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q39419	3.5e-05	38.10	Polcalcin Bet v 4 OS=Betula pendula OX=3505 GN=BETV4 PE=1 SV=1	[more]
Q8RYJ9	1.0e-04	35.21	Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Tan0014644 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024248.1	5.4e-35	86.81	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6591370.1	2.7e-34	87.64	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6608481.1	5.0e-33	82.42	Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037808.1...	[more]
KGN55185.1	4.7e-31	80.22	hypothetical protein Csa_012915 [Cucumis sativus]	[more]
KAA0064376.1	8.8e-30	75.82	putative calcium-binding protein CML27 [Cucumis melo var. makuwa] >TYK20211.1 pu...	[more]

BLAST of Tan0014644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZR6	2.3e-31	80.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1	[more]
A0A5A7VDB9	4.3e-30	75.82	Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5N6RQV2	1.5e-14	50.00	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018544 PE=4 SV=1	[more]
A5AWP8	1.6e-13	53.95	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023174 PE=4 SV=1	[more]
A0A6J1KUW2	4.8e-13	52.78	calmodulin-like OS=Cucurbita maxima OX=3661 GN=LOC111496626 PE=4 SV=1	[more]

BLAST of Tan0014644 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50770.1	1.0e-07	40.98	calmodulin-like 41	[more]
AT3G51920.1	2.1e-05	31.08	calmodulin 9	[more]
AT1G76640.1	2.8e-05	36.07	Calcium-binding EF-hand family protein	[more]
AT1G18210.1	3.6e-05	33.87	Calcium-binding EF-hand family protein	[more]
AT1G18210.2	3.6e-05	33.87	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 1..87 e-value: 7.2E-12 score: 47.5
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 14..85
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 14..85
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 18..77 e-value: 1.1E-7 score: 32.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 15..50 score: 12.365459
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 64..76
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 28..40
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 10..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0014644.1	Tan0014644.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding