Tan0014315 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAAGAAGTTGTGAAAGGAAATCGCCCAACTACCGAGTCCTACTAAGCCTACACCCATTCCAGTCCGAAGTTCGCCGAGGAGCCGAGTGACGTGCCAACGCGACTAATTGAGTGCCGGCCGACGTGGCGATCTTTGTCGATAAGAAGGGTGGAGCGCGCTTGAGTAGGATGGATCCGATCCCATCCCAAAGAGTCAAACTCCTTCCCCGACCCTCTCACCACCGCCTTTGAAGGTGGAATGCCTTTCTCGAAATAGAATAGAGGAGTCCCCCCGAGGAATCGAGCCAGCAGCTGGAGGATCAGAAAGGTAGGCCGGTCGAATGAGGGAGAGCCAAGCCAGAGTCTCAATAAGAAGACTACGTCTTAAAAAGGATGGAAGGGTGGGGGATCCTGTGTGACCATTAAAATCGTTGTCATTCCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACCTTTACTAGAACTAGTTGGGCTTTTTTGAAGGAGCAACTTTTACTAAAACAGGTTATAATTATACCCATGATCAATTGAAGAATAAGTATAATAACCTTAGACAAGTTTATAAAGACTTCAAAAGATTGTTGAACGATATTACTGGAAAAGGTTGGGATCCAGTGTTGGGGACTAATACTTTGGAAGAAGAGCAGTGGACAAATCTTATTAAGGTACTCTTTCTATAACTAATCTTATTCATCTTTGTTAATACTATATAATATAAGGTTTCATTAAGAGAGTTATGTTTGTATATTGTTGTAGGTTAACAAAAAAGCTAAGAAGTTCATAAAAATTGGTTGTCCACATTATGAGAAGTTGATGAGAATATATGGAGATACAATGGCGACTGGTATCCATGCTCATCCATCAACAAAACTTCCATCAGATTCTGAAGATGAAAATAAAACTGAAAGTGATGCTCGTACGAGTATTGAAGGTCATGAAAATAATAAAGATGAAAATCAAGGTTAGAATAAAATGAGCAAGAAAACGAAAAGAAAGAAAGGAGTTTTAAATGATACCATGACGTCTTTTGTTGAAGCTTATATTGAGAGTTCAAAGAGGAGGAATGATATACTTGAAAAAAGACTTATTAGTTCTTCATCAGTTGACTTTAGTGAGACTTCATCAAAAGCAAAAGATTGTGTTGATGAAAGCATGAAAAAATGCCTTAAAGTCATAAATGGTATGGTGGATATTGATGATAAAGCCTATACAAAAGTATTTAATCGTTTGCTTGAGGACACTACGTTGAGACAAGCTTTTCTGCTTATTCCCGAGTCAAGGAGGAGAGGATTTATCAATAACCTTTAA ATGGAGGAAGAAGTTGTGAAAGGAAATCGAGCAACTTTTACTAAAACAGGTTATAATTATACCCATGATCAATTGAAGAATAAGTATAATAACCTTAGACAAGTTTATAAAGACTTCAAAAGATTGTTGAACGATATTACTGGAAAAGGTTGGGATCCAGTGTTGGGGACTAATACTTTGGAAGAAGAGCAGTGGACAAATCTTATTAAGGTTAACAAAAAAGCTAAGAAGTTCATAAAAATTGGTTGTCCACATTATGAGAAGTTGATGAGAATATATGGAGATACAATGGCGACTGGTATCCATGCTCATCCATCAACAAAACTTCCATCAGATTCTGAAGATGAAAATAAAACTGAAAGTGATGCTCGTACGAGTATTGAAGGTCATGAAAATAATAAAGATGAAAATCAAGCTTATATTGAGAGTTCAAAGAGGAGGAATGATATACTTGAAAAAAGACTTATTAGTTCTTCATCAGTTGACTTTAGTGAGACTTCATCAAAAGCAAAAGATTGTGTTGATGAAAGCATGAAAAAATGCCTTAAAGTCATAAATGGTATGGTGGATATTGATGATAAAGCCTATACAAAAGTATTTAATCGTTTGCTTGAGGACACTACGTTGAGACAAGCTTTTCTGCTTATTCCCGAGTCAAGGAGGAGAGGATTTATCAATAACCTTTAA ATGGAGGAAGAAGTTGTGAAAGGAAATCGAGCAACTTTTACTAAAACAGGTTATAATTATACCCATGATCAATTGAAGAATAAGTATAATAACCTTAGACAAGTTTATAAAGACTTCAAAAGATTGTTGAACGATATTACTGGAAAAGGTTGGGATCCAGTGTTGGGGACTAATACTTTGGAAGAAGAGCAGTGGACAAATCTTATTAAGGTTAACAAAAAAGCTAAGAAGTTCATAAAAATTGGTTGTCCACATTATGAGAAGTTGATGAGAATATATGGAGATACAATGGCGACTGGTATCCATGCTCATCCATCAACAAAACTTCCATCAGATTCTGAAGATGAAAATAAAACTGAAAGTGATGCTCGTACGAGTATTGAAGGTCATGAAAATAATAAAGATGAAAATCAAGCTTATATTGAGAGTTCAAAGAGGAGGAATGATATACTTGAAAAAAGACTTATTAGTTCTTCATCAGTTGACTTTAGTGAGACTTCATCAAAAGCAAAAGATTGTGTTGATGAAAGCATGAAAAAATGCCTTAAAGTCATAAATGGTATGGTGGATATTGATGATAAAGCCTATACAAAAGTATTTAATCGTTTGCTTGAGGACACTACGTTGAGACAAGCTTTTCTGCTTATTCCCGAGTCAAGGAGGAGAGGATTTATCAATAACCTTTAA MEEEVVKGNRATFTKTGYNYTHDQLKNKYNNLRQVYKDFKRLLNDITGKGWDPVLGTNTLEEEQWTNLIKVNKKAKKFIKIGCPHYEKLMRIYGDTMATGIHAHPSTKLPSDSEDENKTESDARTSIEGHENNKDENQAYIESSKRRNDILEKRLISSSSVDFSETSSKAKDCVDESMKKCLKVINGMVDIDDKAYTKVFNRLLEDTTLRQAFLLIPESRRRGFINNL Homology
BLAST of Tan0014315 vs. NCBI nr
Match: XP_038904553.1 (L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida]) HSP 1 Score: 295.8 bits (756), Expect = 3.2e-76 Identity = 163/267 (61.05%), Postives = 187/267 (70.04%), Query Frame = 0
BLAST of Tan0014315 vs. NCBI nr
Match: XP_038904554.1 (L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida]) HSP 1 Score: 295.8 bits (756), Expect = 3.2e-76 Identity = 163/267 (61.05%), Postives = 187/267 (70.04%), Query Frame = 0
BLAST of Tan0014315 vs. NCBI nr
Match: XP_038904552.1 (L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida]) HSP 1 Score: 295.8 bits (756), Expect = 3.2e-76 Identity = 163/267 (61.05%), Postives = 187/267 (70.04%), Query Frame = 0
BLAST of Tan0014315 vs. NCBI nr
Match: XP_008443406.1 (PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo]) HSP 1 Score: 290.0 bits (741), Expect = 1.7e-74 Identity = 161/269 (59.85%), Postives = 187/269 (69.52%), Query Frame = 0
BLAST of Tan0014315 vs. NCBI nr
Match: XP_016899632.1 (PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumis melo]) HSP 1 Score: 290.0 bits (741), Expect = 1.7e-74 Identity = 161/269 (59.85%), Postives = 187/269 (69.52%), Query Frame = 0
BLAST of Tan0014315 vs. ExPASy TrEMBL
Match: A0A1S4DUG7 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 8.4e-75 Identity = 161/269 (59.85%), Postives = 187/269 (69.52%), Query Frame = 0
BLAST of Tan0014315 vs. ExPASy TrEMBL
Match: A0A1S3B8P1 (uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 8.4e-75 Identity = 161/269 (59.85%), Postives = 187/269 (69.52%), Query Frame = 0
BLAST of Tan0014315 vs. ExPASy TrEMBL
Match: A0A5A7UDA1 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007990 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 2.5e-55 Identity = 126/204 (61.76%), Postives = 144/204 (70.59%), Query Frame = 0
BLAST of Tan0014315 vs. ExPASy TrEMBL
Match: A0A5A7UIT7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G001920 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 4.5e-44 Identity = 101/202 (50.00%), Postives = 136/202 (67.33%), Query Frame = 0
BLAST of Tan0014315 vs. ExPASy TrEMBL
Match: A0A5D3BNQ5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00100 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 2.9e-43 Identity = 102/204 (50.00%), Postives = 138/204 (67.65%), Query Frame = 0
BLAST of Tan0014315 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06 Identity = 26/89 (29.21%), Postives = 41/89 (46.07%), Query Frame = 0
BLAST of Tan0014315 vs. TAIR 10
Match: AT3G11310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 575 Blast hits to 342 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 559; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 6.9e-05 Identity = 22/63 (34.92%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of Tan0014315 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 2.6e-04 Identity = 37/136 (27.21%), Postives = 62/136 (45.59%), Query Frame = 0
BLAST of Tan0014315 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 5.9e-04 Identity = 57/234 (24.36%), Postives = 94/234 (40.17%), Query Frame = 0
BLAST of Tan0014315 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 5.9e-04 Identity = 57/234 (24.36%), Postives = 94/234 (40.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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