
Tan0014304 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATCATCAAAGGATGCATGCTCAGTTTTATTGGCATTCTCTTTGTTTGTATTGATATGCTTGTGATTATAAATGCAAATTATATCAGTTATGATCCTCTAAAAGGTGATATTAGCCCTGGATGTAATGCTAAACATCCTGAACTTTGTAAGAGACCTGAAGTCAACCCATATCAAAGAGGTTGTAGTGCAATCGATCGTTGCAGAGATGGATCTGATGCCACAGATAGTGAAGAAAAACCAATTGATGGGAAAGAAAATGACATCACAAATGGTGAACAAGATATTATTAAAGAAGATGAAGAAAAAGATATCATAGATCGTGAAATAGAAAAGATTTATAAAGACGATGCACGAAATGACGTCAAGGATAGTGAAGAAAATATTGTTAAAGACAATACGCACAAGATCAACCCAAATGTCACAAAAGATATTTCTCATTGA ATGGCCATCATCAAAGGATGCATGCTCAGTTTTATTGGCATTCTCTTTGTTTGTATTGATATGCTTGTGATTATAAATGCAAATTATATCAGTTATGATCCTCTAAAAGGTGATATTAGCCCTGGATGTAATGCTAAACATCCTGAACTTTGTAAGAGACCTGAAGTCAACCCATATCAAAGAGGTTGTAGTGCAATCGATCGTTGCAGAGATGGATCTGATGCCACAGATAGTGAAGAAAAACCAATTGATGGGAAAGAAAATGACATCACAAATGGTGAACAAGATATTATTAAAGAAGATGAAGAAAAAGATATCATAGATCGTGAAATAGAAAAGATTTATAAAGACGATGCACGAAATGACGTCAAGGATAGTGAAGAAAATATTGTTAAAGACAATACGCACAAGATCAACCCAAATGTCACAAAAGATATTTCTCATTGA ATGGCCATCATCAAAGGATGCATGCTCAGTTTTATTGGCATTCTCTTTGTTTGTATTGATATGCTTGTGATTATAAATGCAAATTATATCAGTTATGATCCTCTAAAAGGTGATATTAGCCCTGGATGTAATGCTAAACATCCTGAACTTTGTAAGAGACCTGAAGTCAACCCATATCAAAGAGGTTGTAGTGCAATCGATCGTTGCAGAGATGGATCTGATGCCACAGATAGTGAAGAAAAACCAATTGATGGGAAAGAAAATGACATCACAAATGGTGAACAAGATATTATTAAAGAAGATGAAGAAAAAGATATCATAGATCGTGAAATAGAAAAGATTTATAAAGACGATGCACGAAATGACGTCAAGGATAGTGAAGAAAATATTGTTAAAGACAATACGCACAAGATCAACCCAAATGTCACAAAAGATATTTCTCATTGA MAIIKGCMLSFIGILFVCIDMLVIINANYISYDPLKGDISPGCNAKHPELCKRPEVNPYQRGCSAIDRCRDGSDATDSEEKPIDGKENDITNGEQDIIKEDEEKDIIDREIEKIYKDDARNDVKDSEENIVKDNTHKINPNVTKDISH Homology
BLAST of Tan0014304 vs. ExPASy Swiss-Prot
Match: Q3ECL0 (Protein RALF-like 9 OS=Arabidopsis thaliana OX=3702 GN=RALFL9 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 8.0e-07 Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of Tan0014304 vs. ExPASy Swiss-Prot
Match: A8MQM7 (Protein RALF-like 15 OS=Arabidopsis thaliana OX=3702 GN=RALFL15 PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.4e-05 Identity = 25/64 (39.06%), Postives = 36/64 (56.25%), Query Frame = 0
BLAST of Tan0014304 vs. ExPASy Swiss-Prot
Match: A8MQM2 (Protein RALF-like 6 OS=Arabidopsis thaliana OX=3702 GN=RALFL6 PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.7e-04 Identity = 25/75 (33.33%), Postives = 41/75 (54.67%), Query Frame = 0
BLAST of Tan0014304 vs. ExPASy Swiss-Prot
Match: A8MRM1 (Protein RALF-like 16 OS=Arabidopsis thaliana OX=3702 GN=RALFL16 PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 6.3e-04 Identity = 30/87 (34.48%), Postives = 44/87 (50.57%), Query Frame = 0
BLAST of Tan0014304 vs. NCBI nr
Match: XP_022159360.1 (uncharacterized protein LOC111025777 [Momordica charantia]) HSP 1 Score: 121.7 bits (304), Expect = 5.3e-24 Identity = 70/136 (51.47%), Postives = 92/136 (67.65%), Query Frame = 0
BLAST of Tan0014304 vs. NCBI nr
Match: XP_022136918.1 (uncharacterized protein LOC111008495 [Momordica charantia]) HSP 1 Score: 101.7 bits (252), Expect = 5.7e-18 Identity = 74/153 (48.37%), Postives = 90/153 (58.82%), Query Frame = 0
BLAST of Tan0014304 vs. NCBI nr
Match: XP_022942029.1 (auxin-induced in root cultures protein 12-like [Cucurbita moschata]) HSP 1 Score: 91.3 bits (225), Expect = 7.7e-15 Identity = 61/149 (40.94%), Postives = 80/149 (53.69%), Query Frame = 0
BLAST of Tan0014304 vs. NCBI nr
Match: KAE8650705.1 (hypothetical protein Csa_010421 [Cucumis sativus]) HSP 1 Score: 89.4 bits (220), Expect = 2.9e-14 Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Tan0014304 vs. NCBI nr
Match: XP_022961577.1 (protein RALF-like 9 [Cucurbita moschata]) HSP 1 Score: 86.3 bits (212), Expect = 2.5e-13 Identity = 52/109 (47.71%), Postives = 66/109 (60.55%), Query Frame = 0
BLAST of Tan0014304 vs. ExPASy TrEMBL
Match: A0A6J1DYH7 (uncharacterized protein LOC111025777 OS=Momordica charantia OX=3673 GN=LOC111025777 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 2.6e-24 Identity = 70/136 (51.47%), Postives = 92/136 (67.65%), Query Frame = 0
BLAST of Tan0014304 vs. ExPASy TrEMBL
Match: A0A6J1C8U5 (uncharacterized protein LOC111008495 OS=Momordica charantia OX=3673 GN=LOC111008495 PE=3 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.7e-18 Identity = 74/153 (48.37%), Postives = 90/153 (58.82%), Query Frame = 0
BLAST of Tan0014304 vs. ExPASy TrEMBL
Match: A0A6J1FQ53 (auxin-induced in root cultures protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111447217 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.7e-15 Identity = 61/149 (40.94%), Postives = 80/149 (53.69%), Query Frame = 0
BLAST of Tan0014304 vs. ExPASy TrEMBL
Match: A0A0A0L8B1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426350 PE=3 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.4e-14 Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Tan0014304 vs. ExPASy TrEMBL
Match: A0A6J1HAJ8 (protein RALF-like 9 OS=Cucurbita moschata OX=3662 GN=LOC111462118 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.2e-13 Identity = 52/109 (47.71%), Postives = 66/109 (60.55%), Query Frame = 0
BLAST of Tan0014304 vs. TAIR 10
Match: AT1G61566.1 (ralf-like 9 ) HSP 1 Score: 55.1 bits (131), Expect = 5.7e-08 Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of Tan0014304 vs. TAIR 10
Match: AT2G22055.1 (RALF-like 15 ) HSP 1 Score: 49.7 bits (117), Expect = 2.4e-06 Identity = 25/64 (39.06%), Postives = 36/64 (56.25%), Query Frame = 0
BLAST of Tan0014304 vs. TAIR 10
Match: AT1G60625.1 (RALF-like 6 ) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05 Identity = 25/75 (33.33%), Postives = 41/75 (54.67%), Query Frame = 0
BLAST of Tan0014304 vs. TAIR 10
Match: AT2G32835.1 (RALF-like 16 ) HSP 1 Score: 45.4 bits (106), Expect = 4.5e-05 Identity = 30/87 (34.48%), Postives = 44/87 (50.57%), Query Frame = 0
BLAST of Tan0014304 vs. TAIR 10
Match: AT1G61563.1 (ralf-like 8 ) HSP 1 Score: 43.5 bits (101), Expect = 1.7e-04 Identity = 21/64 (32.81%), Postives = 37/64 (57.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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