Tan0014151 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTATTCTATTCCCACTCTTTTCTCTAAACAATTTAAGCATTATTATTCACAATCTCTCTTCTTCCAATTGAACCAAACCCCCTCGCCGGAATCCTCCGATTATCATGAGTTACTACGACCACCAACAGCCGCCGGTTGGGGCTCCACCGCCGCAAGGTTAGCCCGAGACGCCGCCGCCTGTTTGTTTAATAATGTATATATAATTAATTGGTTCTCATTTATGGTTGTTGTTGATTGATAAATTACTGTTGCCAGGATTCCCTCCGAAGGACGCTTACCCTCCGCCAGGGTACCCCGTTCAGGGATACCCTGCGGCTCAAGGGTACCCCCCTCCTCCGCCGCCGGGGTATGCCCCACAGTACGCTCCAGCGCAGCAGCCTCCTCCCAAGCACGAAACTGGTTGCCTTCAAGGATGGTCCGTCTCTTCTTAATTCCTCTTTCCTCTTCATCTAATCTCATGGAATTTCTTCAACTGCTCAATATAAGTTGTAATTTTTTCTCTTAAAAAAAAAAGACTATATTTCTCTCGTTAAACGTTAAGGCTATAATTCAATTATACCCTTAGACTTTAAAATTATTTTTAAGAAAATCTTTACAATTATTTTATTTATTTATTTTGTATTTTTTTTACAAAATTTGACATAGCAACGGGTGTCTAAAAATTAATAAGCAATGTGTCACATTATTTATTATCAGAAATTGAGTAGAAGTTTCAGACTCCATTTGAATCGTGATCTAACAACAAAACTTTTAAAATAATAAATTCAATGAAAAATAGTCATTTTTCATGTTTTCTTACATGTGTTTGCTACTCGCATGTTTAAAAAAATTGCATTTCAATTTAAACCTTTGTCCAAAATGTGATTCCAATATTTATAAACTATGAAATTAGTTGTAGTTGTCAATTAAATATTTGGTTGAATATAAATTAGAATTAATTTTTGTTATAAATGTTTTATAATTATTATTCTACAATATCACATAATTTATAGTATATTGCATTATATATTTTTAATTTAACAAAAAAAAATAAATTGAATTTATAACCTAAAATACTATCGTTATTAAAGTTTTTATCTTCTTCAATATCATTTTACATTTAAAAATTTCAAATTCAAAATCTAAAGAGAATGAAAATATAAAAATGTTGTTTCCAAAATTTTTACTATTTTAATAAAAGAATCCAAAAACAGTTTTAAAAAATACAATCTAACAAACACATATGTATTGAACTTAGTGGATCTGAAAACATAAGACAACATCTAGTTTAACAACTAAATAAACCTTAAGATATATATTTGTACTCAAAAGATATCAAAAACATTATTTGCAACGCTATTCACATAATGACATTATTTGTTATGTTAATTTAAACGTGAATTAATGTCATGTTTGCCTTCAAACTTTTACAATTTAACTAACACATCAACTTTTATTTATCAATTTAGTGGAAAGATATATTCTCCAAAAGTTTTGTTTTAGAACAATTTTAAAATTAAAGTTTAGAGATATAACTAAAACTCATTTAAAAATTTAGAAATATTTTTGGATAATTTATTTATTGAGTCTGGGATGGGAACGAATATATGTCTTTTAGGACAGGCTTAGCAAGTTGTATTTATATATCAATTAACATAATATAATGTTTTGAGTTTTTTTTCTTAAAAAAATATAAATATAAAAAATCATTAATATGAGAAACTAAATATAAAATAATAACCTTGAATATTTTGTTTCAGAACATTATTTTTCCAGCAGTTTTTTTATTCTTAATTTTTTAAATTAAAAAACAAGAAACAAAATATTTTTACCAAATGTATTTATACCTTTTCTTTGGATTCAATGAAGAGAAAATAAGAAAAAATTTTAATTCTTTTTTTTTTCGAAAAGAGAGACACAGAAATAAAAAAGAACGAGAATGTAAACATGTCGTTATTTAAATCTTACTTTCATTCTTAACCTTTTTCTTAGGGGCATTCTTCAGCTTTTATATTTATCTATATTTTGGTTTCTGAATTTTATTTTCAATTATCAATTTGGTTGGTTTGAACTTAATGTTCATCTAAACTTTATGATTTTTAAAATTTTAATTTAACATATTTTTTTTAGTACATCAACATTTGGGGATGGCGAATTCGAACTCATGACCTCTGGGTCGTAAATCTTACTTGATACCAGTTGAGTTATATTGTTATTAGCAATTTCAATTTAGCATTTATGATTTAGGATTTTAAAATTTCAATTCAGCACTTATGTCCTTAAATGATTTTTTACCCCACAAAAACCGACTCATTTCTTCTATTTTATTTAAACTTTAATACAGTCAACTAGATTGAAAATACCAATTTATTGTTATGTAAATTGAAAATATGTGTCACGTATAAAAAATGGTAATGGCGTGCAATGTTTGTTAGATGACGTGTGAGACTTAATTTTTTTTTGATCAAATTAAAAATTTTTAAATTATAAAGATTCAAATTGAAACTCAACTCAAATTATATAGAGACCAAATCGATAAATTGTTGTAAAATAAGCATGAAAGTTTTAAATTTAGACCCTATTATAGAGATGGCAACGGCGGGGCGGAATTGGGGATGCATTCTTCATCCTGTCCTCGTTGGAATTTTTCATCCCGTCTCTACCCCATTCACCATTTTGGAGAGTCGGGGTCGGGGTTGGGGATTTCTTGATCGGGGAACGGGTCCCCGCGAAAAAAAATCCCCACTTTTGTTTCTTTTTTAAAATTTTAATTATTTTTTATTAAAAATAAAGAATATATTAAAATCATATAGATAAGTATTATTATTTTTTTATTTATTTAAATCATTAAATTTTTAATATAAAACCTATCAAATTTAGTAACATGTTACTGTATTAATATATATATATATATATATATATATATATATATATATATATAAATTTAAAAAACAGTAATAGTATTAAGATTTATTAGTTATATAAAATTACATGTTATTAACCATATTTTTACACATGATGATTATATATATCATAGATATTTTTTTTAAAAAAATATAAAATAATTATTCAAGGTGGGTTTGGGGATGGGGCGGGATACCGTTTCCGTCTCCGCCCGGTTCCCGTTCAGAGACCTGAAAAAATCTCCAGTTTGACCCCATATCCGATCAAACCGGGGATTCCTCGCCCCGTTTGGGGCGGGGATCCGAACCCGAACCAGAACCTACAAGTTATTGTCATCCCTATCCTATTTAATAACTGTTTGGTTTTTTGTTTTTAGTTTTTGAAAATTAAACTTATAACATCATCTCTACCGTTTTCTTTCTCTCTCTTTCTTTCTATGTGTTTTGTTTTGTTATTTACTATTTTTTTTATGTTTAAAAAATTCATGTTAAAGTGTTGAAACTAAAAAAAAAGTAATTTTTAAAATTTATTTTTATTTTTGAAATTGGACTAAAGATTTAAATGTAAAGTGAAAATCAGTAAAACCAAATGAGGAGGAACTTATACATTTAAAAAATAGAAAACTAAAGAAAAAATGTTATTAGACGGGTACTTAATTATTCAGACAGCTGAGATTGACAAATGAATGTATTGTATGCTTGTTTGTTTTGCAGTTTAGCAGCACTTTGCTGTTGTTGCCTTTTGGATGCTTGCTTCTGATAAGGATGGTCCATGATTCTAATTTCATTGTAGTATGACAATCATCAAATCTTGTTATATTAATAATGCTTTTAGATAACATTCAAAATTATAGTGTGTTTGAATAATTTGTGAAAAAATGCCTTTGGAACAAAAATCAACTTTTCTACAAGTTTCTTTAAAAACTGATCATTTACATTA CTTTATTCTATTCCCACTCTTTTCTCTAAACAATTTAAGCATTATTATTCACAATCTCTCTTCTTCCAATTGAACCAAACCCCCTCGCCGGAATCCTCCGATTATCATGAGTTACTACGACCACCAACAGCCGCCGGTTGGGGCTCCACCGCCGCAAGGATTCCCTCCGAAGGACGCTTACCCTCCGCCAGGGTACCCCGTTCAGGGATACCCTGCGGCTCAAGGGTACCCCCCTCCTCCGCCGCCGGGGTATGCCCCACAGTACGCTCCAGCGCAGCAGCCTCCTCCCAAGCACGAAACTGGTTGCCTTCAAGGATGTTTAGCAGCACTTTGCTGTTGTTGCCTTTTGGATGCTTGCTTCTGATAAGGATGGTCCATGATTCTAATTTCATTGTAGTATGACAATCATCAAATCTTGTTATATTAATAATGCTTTTAGATAACATTCAAAATTATAGTGTGTTTGAATAATTTGTGAAAAAATGCCTTTGGAACAAAAATCAACTTTTCTACAAGTTTCTTTAAAAACTGATCATTTACATTA ATGAGTTACTACGACCACCAACAGCCGCCGGTTGGGGCTCCACCGCCGCAAGGATTCCCTCCGAAGGACGCTTACCCTCCGCCAGGGTACCCCGTTCAGGGATACCCTGCGGCTCAAGGGTACCCCCCTCCTCCGCCGCCGGGGTATGCCCCACAGTACGCTCCAGCGCAGCAGCCTCCTCCCAAGCACGAAACTGGTTGCCTTCAAGGATGTTTAGCAGCACTTTGCTGTTGTTGCCTTTTGGATGCTTGCTTCTGA MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPGYAPQYAPAQQPPPKHETGCLQGCLAALCCCCLLDACF Homology
BLAST of Tan0014151 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 8.1e-20 Identity = 62/101 (61.39%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Tan0014151 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.2e-17 Identity = 54/87 (62.07%), Postives = 58/87 (66.67%), Query Frame = 0
BLAST of Tan0014151 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 5.1e-14 Identity = 55/99 (55.56%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of Tan0014151 vs. ExPASy Swiss-Prot
Match: O16005 (Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 8.6e-06 Identity = 37/62 (59.68%), Postives = 39/62 (62.90%), Query Frame = 0
BLAST of Tan0014151 vs. ExPASy Swiss-Prot
Match: P31356 (Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 5.6e-05 Identity = 35/53 (66.04%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of Tan0014151 vs. NCBI nr
Match: XP_022947085.1 (cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X2 [Cucurbita moschata] >XP_023533985.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34 Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 0
BLAST of Tan0014151 vs. NCBI nr
Match: KAG6605218.1 (hypothetical protein SDJN03_02535, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 154.1 bits (388), Expect = 5.5e-34 Identity = 78/87 (89.66%), Postives = 80/87 (91.95%), Query Frame = 0
BLAST of Tan0014151 vs. NCBI nr
Match: XP_011649307.1 (cysteine-rich and transmembrane domain-containing protein WIH1 [Cucumis sativus] >KGN61955.1 hypothetical protein Csa_005974 [Cucumis sativus]) HSP 1 Score: 152.5 bits (384), Expect = 1.6e-33 Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of Tan0014151 vs. NCBI nr
Match: XP_008457737.2 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]) HSP 1 Score: 151.4 bits (381), Expect = 3.6e-33 Identity = 78/88 (88.64%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of Tan0014151 vs. NCBI nr
Match: XP_038901964.1 (cysteine-rich and transmembrane domain-containing protein WIH1-like [Benincasa hispida]) HSP 1 Score: 150.2 bits (378), Expect = 8.0e-33 Identity = 79/89 (88.76%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Tan0014151 vs. ExPASy TrEMBL
Match: A0A6J1G5U7 (cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451063 PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 5.4e-35 Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 0
BLAST of Tan0014151 vs. ExPASy TrEMBL
Match: A0A0A0LJA6 (CYSTM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G271480 PE=3 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 7.8e-34 Identity = 79/88 (89.77%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of Tan0014151 vs. ExPASy TrEMBL
Match: A0A1S3C5S7 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103497359 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.7e-33 Identity = 78/88 (88.64%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of Tan0014151 vs. ExPASy TrEMBL
Match: A0A6J1L666 (cysteine-rich and transmembrane domain-containing protein WIH1-like OS=Cucurbita maxima OX=3661 GN=LOC111499542 PE=3 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32 Identity = 76/87 (87.36%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of Tan0014151 vs. ExPASy TrEMBL
Match: A0A5N5HK71 (Rhodopsin OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_020209 PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.7e-26 Identity = 69/89 (77.53%), Postives = 73/89 (82.02%), Query Frame = 0
BLAST of Tan0014151 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein ) HSP 1 Score: 97.4 bits (241), Expect = 5.7e-21 Identity = 62/101 (61.39%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Tan0014151 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 89.4 bits (220), Expect = 1.6e-18 Identity = 54/87 (62.07%), Postives = 58/87 (66.67%), Query Frame = 0
BLAST of Tan0014151 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 6.8e-14 Identity = 58/127 (45.67%), Postives = 64/127 (50.39%), Query Frame = 0
BLAST of Tan0014151 vs. TAIR 10
Match: AT4G33660.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 4.7e-07 Identity = 36/71 (50.70%), Postives = 39/71 (54.93%), Query Frame = 0
BLAST of Tan0014151 vs. TAIR 10
Match: AT4G19200.1 (proline-rich family protein ) HSP 1 Score: 45.4 bits (106), Expect = 2.6e-05 Identity = 33/67 (49.25%), Postives = 36/67 (53.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|