Tan0013954 (gene) Snake gourd v1

Overview


Name	Tan0013954
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	nucleolar protein 12
Location	LG01: 26157000 .. 26160947 (+)
RNA-Seq Expression	Tan0013954
Synteny	Tan0013954

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTCCCAATCCAACACGGTGTAAGCCCTAGGGCTCAAAATTTCATCCTCTCCAATCTCCATCGTTCGCCTCAATTACTTTCAACCTGTACATTCGCAGAATCCGCAGAAAACCCAGGAGAATAGTAATGGGGAAGAAGAAAACTAACAACCCCATAAATCCCCCCGACGAAATCGAAACTGGTTCTGCTCCGTCCAGCGTTTTCGATACTCTGTTCGGCAACGTCGGAGTAGAAAACTCCGGCGTTTCTATCTTCTCCACGGACAACCCCTTTCGTAGGAAAGATTCAAATTCCATTCCTGCGGCTGCAGCTGCTGAAAAATCTTCCAATGGTGGCTCTGATGATCATAATATCGATGATGTAAAGAGTAGGAAGAAGGGCAAGGAGAAAAGGGTTGGAACTGATTTGGATTCTGCTGAGGAAGGTGTCAAAAGTTCGTCGGAGATCAAGAAATCGAAGAAGAAGGAGAAGTCTCGGGACCGGGAATTGAATAATGGTCCTGTCGAGAAGGATGATGGAGAAAGCGGTTTCGAATCGCGAAGCGTATTGAAGAAGAACAAAAAGAAAGGTGATGTTTCGGGCTCTGAAACTTTAGAAATGAGTTCTGAATTTAGCGGAAAATTGAAGATAGACGAGCAAAGGAGTGACAATAAACTCGGTGAGAATGTGAAATTGATGAAAGAGAGGAAGAAGAGGAAGAGAGATGAACTTGAGAGAGAGTACGAAGCGAAAAAGTATGGTGCATCAGAGGTAGCTGATGATGGAGAAGAAGGTTCATGGGGCATTGTTGTTGGGAAGAAGAGGAAAGCATTGGACGATCCTTCAGAGATGTTGGTAACGAAGGAAGGATTTGATGATGAAAGCAAGCTTCTGAGAACTGTGTTTGTTGGGAACTTGCCATTGAAAGTGAAGAAAAAAACTTTAGGCAAGGAGTTTAGCCAATTTGGAGAGATAGAATCTGTTAGGATCCGGTCTGTGCCACTTGCAAATGTAAGCATTGTTTTCCATTTGTTCATTATCTTGAATTTGTAGTTCGTGGGCTTTTCTCAATTTATCAATCTTCAACCTTAAGAATTCTGTACTCTTTATCTGATCAGAGCAAAAAACCGAGGAAAGGGGCAATTCTTTCAAAGAAAGTCAATGAAGATGCGGACAGGTAATGCTTTTATGTCATAATGTTGTTTAGCATTTTTGACTTTCTGTGATGTAATTGAATTTGATAAATGTTGTTTCATTGTTTCTATATTGAATCACTGTTCTTCTCTTAAAATCAAAATTAGAGAGAGAGGGATCTTGGTTTTAGGATGATCTTACTTTGTCAGGGTTATATTTATATGGCCTTTTGCTTCCTTGAGTTCTAAAGAGATCATGATTTTAGGAAATGTCTGTAGGAGATAATAGCTGGATATGTTTGCTTTATTCTTTGTCAAGACAACTTTATATACCGTTTTTACTGATGACAATGAATTATTTGCAGTTCTCATGCATATGTTGTTTTCAAAACGGTGGAATCAGCACAGGCTTCTCTGTCCCATAACATGGCTGTGGTATAGTTCTTACTCTTATTTTTCTTCTTGGCCTTTTGAAGTTGAAACTTTTATGCTTTGGCTATTTCCATTCGTGATGAGTAATGACTTTATATTTATGAATTTAGTTTGCAGGAAATCATATACGTGTTGATAGGGCATGCCCTCCGCGTAAAAAGTTGAAAGTAGGAAGTGCTCCAATCTATGATCCCAAGAGAACTGTTTTTGTGGGTAACCTTCCATTTGATGTAAAGGTAACCTTTTATCTCTCGCACAAGCTTCCCTCCCTCTTTCCTTCCCTGATGCCAGATTATATCCTGTAAAGTTGACTTATGGTTTAATACATCTGTACATTTTCAGGATGAAGAATTGTATCAATTATTTTGCGGAATCGAGAACGTGGGATCCAGTGTTGAAGCTGTTCGGGTCATCAGAGACCCTAATGTGAACATAGGGAAGGGCTTTGCATATGTCTTCTTTAAAACAAGGGTATGATCGGCTTTTTGTATATTAATGTTCCTTCATTTACATAAAGATTCCTCATCATCAGGTGGCCATGTCACTAGTTTTATAGTTTTGAACAGAGATCTTTAAGCTCATTGTTTTCTCTCATTTTCTTCTCTTTTTCCAAAATGGTGGGAAGAAAGATTTAAGTACAGTTTTTTATGCAGTTAGTGATGGCGATTAATCTAATAATGATATATGGTCTAAAATAGACATTTGCACACTTGCAAGTATGCGTGTATCGGTATTGTGTGTGTGTGTTTGTTTTTCTCTGTCTGTCTGGATCTAGTAGAGGAGGTCGGCAAGTCCATTCTTTTGGTTGAGAAACTTGATGGTCTTTTTAATTTTTATAACTGGGTTATTAGAGGCCTCGTCCCTTGCATCATGCTCATGGCCGATCCCCACTAACTATGGGGAGGCGTCATCCAATCTTAAGCCCCATTCTTTGCATCATGTTCACGAATCATAACCAATTCTCACTAGTATTAAGGATGCTTCATCTGCCCTAGTCCAGCTCCGGAAGACAACAAGGGCTTTGAGTTATTAAGTTTTTAACCTTCGGGATTTAGTTGGATTAAAACCTTGTGGGTATTTGCAAACATCTCGCGTCCTTGCTGCCGAAACACTTCGGTATTAGTTAGTAAACAAACATATAGGCGAGAACTTGTTGAGAATTTTCTGACCGTCTATGGAGGTACAATTTTTTATTCTTCGAGGAATAAGTCCCCGCCAGAAGCTATATATCCGTTAACTTATTTTTCTCTCTATTTTCCCTGATTGTTTTTGCCACCTCTAGTCTTAAAGTCATCTGCATGTTGCTATGAGAGTACTAGTACGAGATATGTGGGAGATTAGTAGTATATCAATAAGGGGCATAGTGTAAGTAGCTAGGGATGTCTTGGTTATAAATAGGAATGTCAAGGACCTTAGAAGGTGTGGATCATTTTAGTGGAGTGTCCATAGTGGGACTTGGGAGAGAGATAGTCCTCTCGAAAGGCTATTGATCTATTGCAGTTTCTCTTTGATATGTATGTATATATATATATATATATATATATTTTTTTTTTGATAAGACACAATTTCTCTTTTGATATTGCAATATGTTGGTATATTGTGGTTTTTTATTTGGATACCTAACAGTTTTACCATTGGTTTATTATCTTTCAATTTTATACTAAGAACAATACCTTGCTTATATGTCCTGGATGTGCAGGAAGCAGCAAATTCCGTAGTTAACAAACAAAAACTAGAGTTGCGTGATAGAACGCTGAGGCTCTTTCATGCCAAACCAAATCTGGCATCGACCCCACTCAAGAAACGGAATAAACCATCTACCGAAGCCGATCACTCCCCAGCAAAGAAAAGGGCAGTGGATTCAGGTTTGAGGACACCAGACAGCAGCAAGAGGGTAACGCCGAAAGCTCCTGTTGCATCCTATCAGGGCCTGCGTGCGAGCAAAACTGGCTCCCAGAAGAAGATCCATGCTAAAGGCAATAGCACGAAATGGCCGAAATCATATTCAAACAGTAAGGAGAAGCCAGTAGATCACAAGAGGAAAAGACCAGAGAAGACAAGTGAAAGGAAGGGGAAAAGACCAGCAGTTGCCAACAGAAAGGCTGTGGCAAAAGCGTCGAAAAATGGCGTTGCAGCAGCGCCAAAACAAGTCGGGGTGAAGCGCAAGTCCGATAGCCGAACTCCAGAGAGCTCTCACAGAAACAAGAGAATCAAAAGGTTAAGATAGGAAACACGGGAAGAAAGAAGTTGATGTTGTGGACTGAACTGAATTCTTTGAACTTTCTTTGTATTCTTTTATGTGGCTTATCAACTCCCTTCTGGATTAGGGGAAAGTTCATTTAATCAACTTTTCTATGTAGTGCTTTTGCCTCTTATTTTCTATGTAGTGCTTTTGCCTCTTAT

mRNA sequence

CGTTCCCAATCCAACACGGTGTAAGCCCTAGGGCTCAAAATTTCATCCTCTCCAATCTCCATCGTTCGCCTCAATTACTTTCAACCTGTACATTCGCAGAATCCGCAGAAAACCCAGGAGAATAGTAATGGGGAAGAAGAAAACTAACAACCCCATAAATCCCCCCGACGAAATCGAAACTGGTTCTGCTCCGTCCAGCGTTTTCGATACTCTGTTCGGCAACGTCGGAGTAGAAAACTCCGGCGTTTCTATCTTCTCCACGGACAACCCCTTTCGTAGGAAAGATTCAAATTCCATTCCTGCGGCTGCAGCTGCTGAAAAATCTTCCAATGGTGGCTCTGATGATCATAATATCGATGATGTAAAGAGTAGGAAGAAGGGCAAGGAGAAAAGGGTTGGAACTGATTTGGATTCTGCTGAGGAAGGTGTCAAAAGTTCGTCGGAGATCAAGAAATCGAAGAAGAAGGAGAAGTCTCGGGACCGGGAATTGAATAATGGTCCTGTCGAGAAGGATGATGGAGAAAGCGGTTTCGAATCGCGAAGCGTATTGAAGAAGAACAAAAAGAAAGGTGATGTTTCGGGCTCTGAAACTTTAGAAATGAGTTCTGAATTTAGCGGAAAATTGAAGATAGACGAGCAAAGGAGTGACAATAAACTCGGTGAGAATGTGAAATTGATGAAAGAGAGGAAGAAGAGGAAGAGAGATGAACTTGAGAGAGAGTACGAAGCGAAAAAGTATGGTGCATCAGAGGTAGCTGATGATGGAGAAGAAGGTTCATGGGGCATTGTTGTTGGGAAGAAGAGGAAAGCATTGGACGATCCTTCAGAGATGTTGGTAACGAAGGAAGGATTTGATGATGAAAGCAAGCTTCTGAGAACTGTGTTTGTTGGGAACTTGCCATTGAAAGTGAAGAAAAAAACTTTAGGCAAGGAGTTTAGCCAATTTGGAGAGATAGAATCTGTTAGGATCCGGTCTGTGCCACTTGCAAATAGCAAAAAACCGAGGAAAGGGGCAATTCTTTCAAAGAAAGTCAATGAAGATGCGGACAGTTCTCATGCATATGTTGTTTTCAAAACGGTGGAATCAGCACAGGCTTCTCTGTCCCATAACATGGCTGTGTTTGCAGGAAATCATATACGTGTTGATAGGGCATGCCCTCCGCGTAAAAAGTTGAAAGTAGGAAGTGCTCCAATCTATGATCCCAAGAGAACTGTTTTTGTGGGTAACCTTCCATTTGATGTAAAGGATGAAGAATTGTATCAATTATTTTGCGGAATCGAGAACGTGGGATCCAGTGTTGAAGCTGTTCGGGTCATCAGAGACCCTAATGTGAACATAGGGAAGGGCTTTGCATATGTCTTCTTTAAAACAAGGGAAGCAGCAAATTCCGTAGTTAACAAACAAAAACTAGAGTTGCGTGATAGAACGCTGAGGCTCTTTCATGCCAAACCAAATCTGGCATCGACCCCACTCAAGAAACGGAATAAACCATCTACCGAAGCCGATCACTCCCCAGCAAAGAAAAGGGCAGTGGATTCAGGTTTGAGGACACCAGACAGCAGCAAGAGGGTAACGCCGAAAGCTCCTGTTGCATCCTATCAGGGCCTGCGTGCGAGCAAAACTGGCTCCCAGAAGAAGATCCATGCTAAAGGCAATAGCACGAAATGGCCGAAATCATATTCAAACAGTAAGGAGAAGCCAGTAGATCACAAGAGGAAAAGACCAGAGAAGACAAGTGAAAGGAAGGGGAAAAGACCAGCAGTTGCCAACAGAAAGGCTGTGGCAAAAGCGTCGAAAAATGGCGTTGCAGCAGCGCCAAAACAAGTCGGGGTGAAGCGCAAGTCCGATAGCCGAACTCCAGAGAGCTCTCACAGAAACAAGAGAATCAAAAGGTTAAGATAGGAAACACGGGAAGAAAGAAGTTGATGTTGTGGACTGAACTGAATTCTTTGAACTTTCTTTGTATTCTTTTATGTGGCTTATCAACTCCCTTCTGGATTAGGGGAAAGTTCATTTAATCAACTTTTCTATGTAGTGCTTTTGCCTCTTATTTTCTATGTAGTGCTTTTGCCTCTTAT

Coding sequence (CDS)

ATGGGGAAGAAGAAAACTAACAACCCCATAAATCCCCCCGACGAAATCGAAACTGGTTCTGCTCCGTCCAGCGTTTTCGATACTCTGTTCGGCAACGTCGGAGTAGAAAACTCCGGCGTTTCTATCTTCTCCACGGACAACCCCTTTCGTAGGAAAGATTCAAATTCCATTCCTGCGGCTGCAGCTGCTGAAAAATCTTCCAATGGTGGCTCTGATGATCATAATATCGATGATGTAAAGAGTAGGAAGAAGGGCAAGGAGAAAAGGGTTGGAACTGATTTGGATTCTGCTGAGGAAGGTGTCAAAAGTTCGTCGGAGATCAAGAAATCGAAGAAGAAGGAGAAGTCTCGGGACCGGGAATTGAATAATGGTCCTGTCGAGAAGGATGATGGAGAAAGCGGTTTCGAATCGCGAAGCGTATTGAAGAAGAACAAAAAGAAAGGTGATGTTTCGGGCTCTGAAACTTTAGAAATGAGTTCTGAATTTAGCGGAAAATTGAAGATAGACGAGCAAAGGAGTGACAATAAACTCGGTGAGAATGTGAAATTGATGAAAGAGAGGAAGAAGAGGAAGAGAGATGAACTTGAGAGAGAGTACGAAGCGAAAAAGTATGGTGCATCAGAGGTAGCTGATGATGGAGAAGAAGGTTCATGGGGCATTGTTGTTGGGAAGAAGAGGAAAGCATTGGACGATCCTTCAGAGATGTTGGTAACGAAGGAAGGATTTGATGATGAAAGCAAGCTTCTGAGAACTGTGTTTGTTGGGAACTTGCCATTGAAAGTGAAGAAAAAAACTTTAGGCAAGGAGTTTAGCCAATTTGGAGAGATAGAATCTGTTAGGATCCGGTCTGTGCCACTTGCAAATAGCAAAAAACCGAGGAAAGGGGCAATTCTTTCAAAGAAAGTCAATGAAGATGCGGACAGTTCTCATGCATATGTTGTTTTCAAAACGGTGGAATCAGCACAGGCTTCTCTGTCCCATAACATGGCTGTGTTTGCAGGAAATCATATACGTGTTGATAGGGCATGCCCTCCGCGTAAAAAGTTGAAAGTAGGAAGTGCTCCAATCTATGATCCCAAGAGAACTGTTTTTGTGGGTAACCTTCCATTTGATGTAAAGGATGAAGAATTGTATCAATTATTTTGCGGAATCGAGAACGTGGGATCCAGTGTTGAAGCTGTTCGGGTCATCAGAGACCCTAATGTGAACATAGGGAAGGGCTTTGCATATGTCTTCTTTAAAACAAGGGAAGCAGCAAATTCCGTAGTTAACAAACAAAAACTAGAGTTGCGTGATAGAACGCTGAGGCTCTTTCATGCCAAACCAAATCTGGCATCGACCCCACTCAAGAAACGGAATAAACCATCTACCGAAGCCGATCACTCCCCAGCAAAGAAAAGGGCAGTGGATTCAGGTTTGAGGACACCAGACAGCAGCAAGAGGGTAACGCCGAAAGCTCCTGTTGCATCCTATCAGGGCCTGCGTGCGAGCAAAACTGGCTCCCAGAAGAAGATCCATGCTAAAGGCAATAGCACGAAATGGCCGAAATCATATTCAAACAGTAAGGAGAAGCCAGTAGATCACAAGAGGAAAAGACCAGAGAAGACAAGTGAAAGGAAGGGGAAAAGACCAGCAGTTGCCAACAGAAAGGCTGTGGCAAAAGCGTCGAAAAATGGCGTTGCAGCAGCGCCAAAACAAGTCGGGGTGAAGCGCAAGTCCGATAGCCGAACTCCAGAGAGCTCTCACAGAAACAAGAGAATCAAAAGGTTAAGATAG

Protein sequence

MGKKKTNNPINPPDEIETGSAPSSVFDTLFGNVGVENSGVSIFSTDNPFRRKDSNSIPAAAAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKSRDRELNNGPVEKDDGESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLGENVKLMKERKKRKRDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVTKEGFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSKKVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAPIYDPKRTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAANSVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTPDSSKRVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSNSKEKPVDHKRKRPEKTSERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDSRTPESSHRNKRIKRLR

Homology

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BLAST of Tan0013954 vs. ExPASy Swiss-Prot
Match: O13741 (Nucleolar protein 12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nop12 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.9e-28
Identity = 112/355 (31.55%), Postives = 178/355 (50.14%), Query Frame = 0


Query: 136 ESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLGENVKLMKERKKRK---- 195
           +S+ + K   K+  V   + +E+      +   +   SD K  +N+K   ++KK+K    
Sbjct: 35  QSKPIPKPVAKETTVLTKKDVEVEEANGVEEAAETIESDTKEVQNIKPKSKKKKKKLNDS 94

Query: 196 RDELEREY----------EAKKYGASEVADDGEEGSWGIVVGKKRKALDD-PSEMLVTKE 255
            D++E +Y          E  K  A  + D+ ++      V ++R + +D  SE  V ++
Sbjct: 95  SDDIEGKYFEELLAEEDEEKDKDSAGLINDEEDKSPAKQSVLEERTSQEDVKSEREVAEK 154

Query: 256 GFDDESKLLRTVFVGNLPLKV-----KKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKG 315
             ++  K  +TVFV NLP +V       K L K F QFG ++S+R RS+  + +  PRK 
Sbjct: 155 LANELEKSDKTVFVNNLPARVVTNKGDYKDLTKHFRQFGAVDSIRFRSLAFSEA-IPRKV 214

Query: 316 AILSKKVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAP 375
           A   KK + + D+ +AY+VF+   SA+++LS N  +F   H+RVD    P  +       
Sbjct: 215 AFFEKKFHSERDTVNAYIVFRDSSSARSALSLNGTMFMDRHLRVDSVSHPMPQ------- 274

Query: 376 IYDPKRTVFVGNLPFDVKDEELYQLF--CGIENVGSSVEAVRVIRDPNVNIGKGFAYVFF 435
             D KR VFVGNL F+ ++E L++ F  CG      S++ VR++RDP  N+GKGFAY+ F
Sbjct: 275 --DTKRCVFVGNLAFEAEEEPLWRYFGDCG------SIDYVRIVRDPKTNLGKGFAYIQF 334

Query: 436 K-TREAANSVVNKQKLELRDRTLRLFHAKPNL-ASTPLKKRNKPSTEADHSPAKK 467
           K T     +++  +K     RTLR+  AK     S    KR    T      A+K
Sbjct: 335 KDTMGVDKALLLNEKKMPEGRTLRIMRAKSTKPKSITRSKRGDEKTRTLQGRARK 373

[Close]

BLAST of Tan0013954 vs. ExPASy Swiss-Prot
Match: Q8C5L7 (RNA-binding protein 34 OS=Mus musculus OX=10090 GN=Rbm34 PE=1 SV=2)

HSP 1 Score: 121.7 bits (304), Expect = 2.8e-26
Identity = 85/229 (37.12%), Postives = 122/229 (53.28%), Query Frame = 0


Query: 243 DDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSKKV 302
           ++  K  RTVFVGNLP+   KK L   F ++G++ESVR RSV  A     +K A + +K 
Sbjct: 182 EERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKF 241

Query: 303 NEDADSSHAYVVFKTVESAQASLSHNMAVFA-GNHIRVDRACPPRKKLKVGSAPIYDPKR 362
           + D  S +AYVVFK   +A  +L  N A  A G  IRVD A     +           KR
Sbjct: 242 HPDQKSINAYVVFKDESAAAKALQRNGAQIAEGFRIRVDLASETASR----------DKR 301

Query: 363 TVFVGNLPFDVKDEELYQLF--CGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAA 422
           +VFVGNLP+ ++D  L + F  CG      S+ AVR++R+P   +G+GF YV F+  +A 
Sbjct: 302 SVFVGNLPYKIEDSALEEHFLDCG------SIVAVRIVRNPLTGVGRGFGYVLFENTDAV 361

Query: 423 NSVVNKQKLELRDRTLRLFHAKPNLASTPLKKRN-KPSTEADHSPAKKR 468
           +  +     EL  R LR+     ++    LK++N  PS + D    K+R
Sbjct: 362 HLALKLNNSELMGRKLRVMR---SVNKEKLKQQNSNPSLKKDVIKPKQR 391

[Close]

BLAST of Tan0013954 vs. ExPASy Swiss-Prot
Match: Q5M9F1 (RNA-binding protein 34 OS=Rattus norvegicus OX=10116 GN=Rbm34 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 3.6e-26
Identity = 95/270 (35.19%), Postives = 135/270 (50.00%), Query Frame = 0


Query: 243 DDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSKKV 302
           ++  K  RTVFVGNLP+   KK L   F ++G++ESVR RSV  A     +K A + +K 
Sbjct: 176 EERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLSKKLAAIKRKF 235

Query: 303 NEDADSSHAYVVFKTVESAQASLSHNMAVFA-GNHIRVDRACPPRKKLKVGSAPIYDPKR 362
           + D  S +AYVVFK   +A  +L  N A  A G  IRVD A     +           KR
Sbjct: 236 HPDQKSINAYVVFKEERAAAKALQRNGAQIAEGFRIRVDLASETASR----------DKR 295

Query: 363 TVFVGNLPFDVKDEELYQLF--CGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAA 422
           +VFVGNLP+ V +  L + F  CG      S+ AVR++R+P   +G+GF YV F+  +A 
Sbjct: 296 SVFVGNLPYRVDESALEEHFLDCG------SIVAVRIVRNPLTGVGRGFGYVLFENTDAV 355

Query: 423 NSVVNKQKLELRDRTLRLFHAKPNLASTPLKKRN-KPSTEADHSPAKKRAVDSGLRTPDS 482
           +  +     EL  R LR+     ++    LK++N  PS + D S +K+R       T   
Sbjct: 356 HLALKLNNSELMGRKLRVMR---SVNKEKLKQQNSNPSVKKDGSKSKQRL----NFTSKE 415

Query: 483 SKRVTPKAPVASYQGLRASKTGSQKKIHAK 509
            K  +  A +     L   K G +KK   K
Sbjct: 416 GKSHSKNAFIGEKAVLMKKKKGQKKKGQTK 422

[Close]

BLAST of Tan0013954 vs. ExPASy Swiss-Prot
Match: P42696 (RNA-binding protein 34 OS=Homo sapiens OX=9606 GN=RBM34 PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 7.6e-24
Identity = 106/335 (31.64%), Postives = 161/335 (48.06%), Query Frame = 0


Query: 138 RSVLKKNKKKGDVSGSETLE--MSSEFSGKLKIDEQRSDNKLGENVKLMKERKKRKRDEL 197
           +  +KK K+  +   +  +E  +S E + K+K  ++ ++       KL          +L
Sbjct: 76  KQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTN----AEKKLADRESALASADL 135

Query: 198 EREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVT---KEGFDDESKLL--- 257
           E E   K+    + +  G       V    RK LDD  + +V+   K   + E + L   
Sbjct: 136 EEEIHQKQGQKRKNSQPG-------VKVADRKILDDTEDTVVSQRKKIQINQEEERLKNE 195

Query: 258 RTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSKKVNEDADSS 317
           RTVFVGNLP+   KK L   F ++G+IESVR RS+  A     +K A + +K++ D  + 
Sbjct: 196 RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNI 255

Query: 318 HAYVVFKTVESAQASLSHNMAVFA-GNHIRVDRACPPRKKLKVGSAPIYDPKRTVFVGNL 377
           +AYVVFK   +A  +L  N A  A G  IRVD A     +           KR+VFVGNL
Sbjct: 256 NAYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR----------DKRSVFVGNL 315

Query: 378 PFDVKDE--ELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAANSVVNKQ 437
           P+ V++   E + L CG      S+ AVR++RD    IGKGF YV F+  ++ +  +   
Sbjct: 316 PYKVEESAIEKHFLDCG------SIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLN 375

Query: 438 KLELRDRTLRLFHA------KPNLASTPLKKRNKP 456
             EL  R LR+  +      K   ++  LK  +KP
Sbjct: 376 NSELMGRKLRVMRSVNKEKFKQQNSNPRLKNVSKP 383

[Close]

BLAST of Tan0013954 vs. ExPASy Swiss-Prot
Match: Q5AHI7 (Nucleolar protein 12 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=NOP12 PE=3 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 9.6e-19
Identity = 138/486 (28.40%), Postives = 215/486 (44.24%), Query Frame = 0


Query: 73  DHNIDDV-KSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKSRDRELNNGPVEKDDG 132
           D NI+ + K+ + G   +   +L   +  V    ++   K++    +  LN    E D+ 
Sbjct: 15  DENIEQLFKNTRDGPVSK--DELVKKQRTVIKIPKVTAPKQQTNENESTLNQSANESDEE 74

Query: 133 ESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLGENVKLMKERKKRK 192
           E  +   S      +  D   +E  E +S      K D++  + +     KL+ E+ + +
Sbjct: 75  EEEYNDES-----NEGDDSDDAEQTEPTS------KNDDENENLEAQYFDKLLSEQNE-E 134

Query: 193 RDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVTKEGFDDESKLLRT 252
           +DE +   EAK   +S+VA++  +      V  K K L+                K  RT
Sbjct: 135 QDESKESSEAK---SSKVAEERTKAKVATTVDLKEKELE----------------KADRT 194

Query: 253 VFVGNLPL-----KVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSKKVNEDA 312
           VFVGN+P      K+  K     F  +G+I+S+R RS+   +   PRK A   K +++  
Sbjct: 195 VFVGNVPADVITSKIIAKNFKNLFKHYGKIDSIRYRSISF-DEHLPRKVAFAKKNLHKSR 254

Query: 313 DSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAPIYDPKRTVFVG 372
           DS +AY+V+K   ++ A+   N  VF  +H+RVD    P  K         D KRT+FVG
Sbjct: 255 DSVNAYIVYKEKPASIAAKELNATVFEDHHLRVDHVSHPAPK---------DNKRTIFVG 314

Query: 373 NLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAANS--VVN 432
           NL F+ K+E L++ F     +   VE+VR+IRD   N+GKGFA V FK   + N   ++N
Sbjct: 315 NLDFEEKEETLWKYF--NSKLDQDVESVRIIRDSKTNLGKGFALVQFKDTLSVNKALLLN 374

Query: 433 KQKLEL----RDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTPDSSK 492
            + LE     + R LR+  AK N A   L   N      D+   K  A  S  +  D+ K
Sbjct: 375 DKPLETGTQKKGRKLRISRAKSN-AKPSLMSPN----HFDNQKKKFAAGKSQQKLNDNQK 434

Query: 493 RVTPKAPVASYQGLRASKTGSQKKI------HAKGNSTKWPKSYSNSKEKPVDHKRKRPE 541
               +A     +  R S  G  K+I        KG + K  K     K+      R+R  
Sbjct: 435 TKIGRAQSTLGKADR-STVGKAKRIILEGQRATKGEAIKGIKGSKKGKKVKKPRIRERST 449

[Close]

BLAST of Tan0013954 vs. NCBI nr
Match: XP_022922379.1 (nucleolar protein 12 [Cucurbita moschata])

HSP 1 Score: 898.7 bits (2321), Expect = 2.8e-257
Identity = 500/606 (82.51%), Postives = 531/606 (87.62%), Query Frame = 0


Query: 1   MGKKKTNNPINPPDEIETGSAPSSVFDTLFGNVGVENSGVSIFSTDNPFRRKDSNSIPAA 60
           MGKKKTN P +  +E+  GSAPSSVF+TLFGNVG E+ GVSIFSTDNPFRRKD++  P A
Sbjct: 1   MGKKKTNGPKSSSEEVAIGSAPSSVFETLFGNVGAESDGVSIFSTDNPFRRKDTSLTPVA 60

Query: 61  AAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKSRDRE 120
           A AEKS +GG+DDH IDDVKSRKK KEKRVG DLDSAE GVKSSSE+KKSK+KEKSRDRE
Sbjct: 61  AVAEKSPSGGADDHTIDDVKSRKKSKEKRVGMDLDSAENGVKSSSEVKKSKRKEKSRDRE 120

Query: 121 LNNGPVEKDDGESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLGEN 180
           L+N  +EKDD E GF+SR V+KKNK+ G        E+ SEFSG+LKIDEQRSD+KLG +
Sbjct: 121 LDNEVIEKDDEERGFQSRGVVKKNKRNG-------AEIGSEFSGELKIDEQRSDSKLGVD 180

Query: 181 VKLMKERKKRKRDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVTKE 240
           VKL KE+KKRKRDELEREYEAKKYGASEVA+D  EGS G VVGKKRKA+DD SEMLVTKE
Sbjct: 181 VKLTKEKKKRKRDELEREYEAKKYGASEVAEDEVEGSGGTVVGKKRKAMDDFSEMLVTKE 240

Query: 241 GFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300
           GFDDESKLLRTVFVGNLPLKVKKK LGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK
Sbjct: 241 GFDDESKLLRTVFVGNLPLKVKKKALGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300

Query: 301 KVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAPIYDPK 360
           KVNEDADSSHAYVVFKT ESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGS+PIYDPK
Sbjct: 301 KVNEDADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSSPIYDPK 360

Query: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAAN 420
           RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKT+EAAN
Sbjct: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTKEAAN 420

Query: 421 SVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTPDSSK 480
           SV+N QKL+LRDR LRLFHAKPNL STPLKKRN PSTE D S AKKRAVDSGLRTPDSSK
Sbjct: 421 SVINNQKLQLRDRALRLFHAKPNLTSTPLKKRNNPSTEVDRS-AKKRAVDSGLRTPDSSK 480

Query: 481 RVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSNSKEKPVDHKR---------- 540
           RVTPKA VASYQGLRASK GSQKK  AKG+ TKW KS+SNSKEK V HKR          
Sbjct: 481 RVTPKATVASYQGLRASKPGSQKKNQAKGSGTKWTKSHSNSKEKRVAHKRRRPEDFPERT 540

Query: 541 -----KRPEKTSERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDSRTPESSHRNK 592
                KRPEK SERKGKRPAVANRKAVA AS+NGV AAPKQ GVKRKSDSRTPESSHRNK
Sbjct: 541 SERKGKRPEKMSERKGKRPAVANRKAVANASRNGV-AAPKQGGVKRKSDSRTPESSHRNK 597

[Close]

BLAST of Tan0013954 vs. NCBI nr
Match: KAG7028265.1 (nop12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 892.5 bits (2305), Expect = 2.0e-255
Identity = 493/606 (81.35%), Postives = 530/606 (87.46%), Query Frame = 0


Query: 1   MGKKKTNNPINPPDEIETGSAPSSVFDTLFGNVGVENSGVSIFSTDNPFRRKDSNSIPAA 60
           MGKKKTN P +  +E+  GSAPSSVF+TLFGNVG E+ GVSIFST+NPFRRKD++S P A
Sbjct: 1   MGKKKTNGPKSSSEEVAIGSAPSSVFETLFGNVGAESDGVSIFSTENPFRRKDTSSTPVA 60

Query: 61  AAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKSRDRE 120
           A AEK  +GG+DDH IDDV+SRKK KEKRVG DLDSAE GVKSSSE+KKSK+KEKSRDRE
Sbjct: 61  AVAEKFPSGGADDHTIDDVRSRKKNKEKRVGMDLDSAENGVKSSSEVKKSKRKEKSRDRE 120

Query: 121 LNNGPVEKDDGESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLGEN 180
           L+N  +E DD E GF+SR V+KKNK+ G        E+ SEFSG+LKIDEQRSD+KLG +
Sbjct: 121 LDNEVIENDDEERGFQSRGVVKKNKRNG-------AEIGSEFSGELKIDEQRSDSKLGVD 180

Query: 181 VKLMKERKKRKRDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVTKE 240
           VKL KE+KKRKRDELEREYEAKKYGASEVA+D  EGS G VVGKKRKA+DD SEML+TKE
Sbjct: 181 VKLTKEKKKRKRDELEREYEAKKYGASEVAEDEVEGSGGTVVGKKRKAMDDFSEMLITKE 240

Query: 241 GFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300
           GFDDESKLLRTVFVGNLPLKVKKK LGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK
Sbjct: 241 GFDDESKLLRTVFVGNLPLKVKKKALGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300

Query: 301 KVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAPIYDPK 360
           KVNEDADSSHAYVVFKT ESAQASL+HNMAVFAGNHIRVDRACPPRKKLKVGS+PIYDPK
Sbjct: 301 KVNEDADSSHAYVVFKTEESAQASLTHNMAVFAGNHIRVDRACPPRKKLKVGSSPIYDPK 360

Query: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAAN 420
           RTVFVGNLPFDVKDEELYQLFCG+ENVGSSVEAVRVIRDPNVNIGKGFAYVFFKT+EAAN
Sbjct: 361 RTVFVGNLPFDVKDEELYQLFCGMENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTKEAAN 420

Query: 421 SVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTPDSSK 480
           SV+N QKL+LRDR LRLFHAKPNL STPLKKRN PSTE D S AKKRAVDSGLRTPDSSK
Sbjct: 421 SVINNQKLQLRDRALRLFHAKPNLTSTPLKKRNNPSTEVDRS-AKKRAVDSGLRTPDSSK 480

Query: 481 RVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSNSKEKPVDHKR---------- 540
           RVTPKA VASYQGLRASK GSQKK  AKG+ TKW KS+SNSKEK VDHKR          
Sbjct: 481 RVTPKATVASYQGLRASKPGSQKKNQAKGSGTKWTKSHSNSKEKRVDHKRRRPEDFPERT 540

Query: 541 -----KRPEKTSERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDSRTPESSHRNK 592
                KRPEK SERKGKRPAVANRKAVA AS+NG+ AAPKQ GVKRKSDSRTPESSHRNK
Sbjct: 541 SERKGKRPEKMSERKGKRPAVANRKAVANASRNGI-AAPKQGGVKRKSDSRTPESSHRNK 597

[Close]

BLAST of Tan0013954 vs. NCBI nr
Match: XP_023005336.1 (nucleolar protein 12 [Cucurbita maxima])

HSP 1 Score: 888.3 bits (2294), Expect = 3.7e-254
Identity = 494/606 (81.52%), Postives = 529/606 (87.29%), Query Frame = 0


Query: 1   MGKKKTNNPINPPDEIETGSAPSSVFDTLFGNVGVENSGVSIFSTDNPFRRKDSNSIPAA 60
           MGKKKTN+P +  +E+  GSAPSSVF+TLFGNVG E+ GVSIFST+NPFRRKD++S P A
Sbjct: 1   MGKKKTNDPKSSSEEVAIGSAPSSVFETLFGNVGAESDGVSIFSTENPFRRKDTSSTPLA 60

Query: 61  AAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKSRDRE 120
           A AEKS +GG+DDH IDDVKSRKK KEKRVG DLDSAE GVKSSS++KKSK+K+KSRDRE
Sbjct: 61  AVAEKSPSGGADDHTIDDVKSRKKSKEKRVGMDLDSAENGVKSSSQVKKSKRKDKSRDRE 120

Query: 121 LNNGPVEKDDGESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLGEN 180
           L+N  +EKDD E GF+SR V+KKNK+ G        E+ SEFSG+LKIDEQRSD+KLG +
Sbjct: 121 LDNEVIEKDDEERGFQSRGVVKKNKRNG-------AEIGSEFSGELKIDEQRSDSKLGVD 180

Query: 181 VKLMKERKKRKRDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVTKE 240
           VKL KE+KKRKRDELEREYEAKKYGASEVA+D  EGS G VVGKKRKA+DD SEMLVTKE
Sbjct: 181 VKLTKEKKKRKRDELEREYEAKKYGASEVAEDEVEGSGGTVVGKKRKAMDDFSEMLVTKE 240

Query: 241 GFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300
           GFDDESKLLRTVFVGNLPLKVKKK LGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK
Sbjct: 241 GFDDESKLLRTVFVGNLPLKVKKKALGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300

Query: 301 KVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAPIYDPK 360
           KVNEDADSSHAYVVFKT ESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGS+PIYDPK
Sbjct: 301 KVNEDADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSSPIYDPK 360

Query: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAAN 420
           RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKT+EAAN
Sbjct: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTKEAAN 420

Query: 421 SVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTPDSSK 480
           SV+N QKL+LRDR LRLFHAKPNL STPLKKRN PSTE D S AKKRAVDSGLRTPDSSK
Sbjct: 421 SVINNQKLQLRDRALRLFHAKPNLTSTPLKKRNNPSTEVDRSSAKKRAVDSGLRTPDSSK 480

Query: 481 RVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSNSKEKPVDHKR---------- 540
           R   KA VASYQGLRASK  SQKK  AKG+ TKW KS+SNSKEK VDHKR          
Sbjct: 481 RA--KATVASYQGLRASKPVSQKKNQAKGSGTKWTKSHSNSKEKRVDHKRRRPEDFPEST 540

Query: 541 -----KRPEKTSERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDSRTPESSHRNK 592
                KRPEK SERKGKRPAVANRKAVA AS+NGV AAPKQ GVKRKSDSRTPESSHRNK
Sbjct: 541 SERKGKRPEKMSERKGKRPAVANRKAVANASRNGV-AAPKQGGVKRKSDSRTPESSHRNK 596

[Close]

BLAST of Tan0013954 vs. NCBI nr
Match: KAG6596731.1 (Inositol-tetrakisphosphate 1-kinase 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 885.6 bits (2287), Expect = 2.4e-253
Identity = 491/603 (81.43%), Postives = 526/603 (87.23%), Query Frame = 0


Query: 1   MGKKKTNNPINPPDEIETGSAPSSVFDTLFGNVGVENSGVSIFSTDNPFRRKDSNSIPAA 60
           MGKKKTN P +  +E+  GSAPSSVF+TLFGNVG E+ GVSIFST+NPFRRKD++S P A
Sbjct: 1   MGKKKTNGPKSSSEEVAIGSAPSSVFETLFGNVGAESDGVSIFSTENPFRRKDTSSTPVA 60

Query: 61  AAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKSRDRE 120
           A AEK  +GG+DDH IDDV+SRKK KEKRVG DLDSAE GVKSSSE+KKSK+KEKSRDRE
Sbjct: 61  AVAEKFPSGGADDHTIDDVRSRKKNKEKRVGMDLDSAENGVKSSSEVKKSKRKEKSRDRE 120

Query: 121 LNNGPVEKDDGESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLGEN 180
           L+N  +E DD E GF+SR V+KKNK+ G        E+ SEFSG+LKIDEQRSD+KLG +
Sbjct: 121 LDNEVIENDDEERGFQSRGVVKKNKRNG-------AEIGSEFSGELKIDEQRSDSKLGVD 180

Query: 181 VKLMKERKKRKRDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVTKE 240
           VKL KE+KKRKRDELEREYEAKKYGASEVA+D  EGS G VVGKKRKA+DD SEMLVTKE
Sbjct: 181 VKLTKEKKKRKRDELEREYEAKKYGASEVAEDEVEGSGGTVVGKKRKAMDDFSEMLVTKE 240

Query: 241 GFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300
           GFDDESKLLRTVFVGNLPLKVKKK LGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK
Sbjct: 241 GFDDESKLLRTVFVGNLPLKVKKKALGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300

Query: 301 KVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAPIYDPK 360
           KVNEDADSSHAYVVFKT ESAQASL+HNMAVFAGNHIRVDRACPPRKKLKVGS+PIYDPK
Sbjct: 301 KVNEDADSSHAYVVFKTEESAQASLTHNMAVFAGNHIRVDRACPPRKKLKVGSSPIYDPK 360

Query: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAAN 420
           RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKT+EAAN
Sbjct: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTKEAAN 420

Query: 421 SVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTPDSSK 480
           SV+N QKL+LRDR LRLFHAKPNL S PLKKRN PSTE D S AKKRAVDSGLRTPDSSK
Sbjct: 421 SVINNQKLQLRDRALRLFHAKPNLTSIPLKKRNNPSTEVDRS-AKKRAVDSGLRTPDSSK 480

Query: 481 RVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSNSKEKPVDHKR---------- 540
           RVTPKA VASYQGLRASK GSQKK  AKG+ TKW KS+SNSKEK V HKR          
Sbjct: 481 RVTPKATVASYQGLRASKPGSQKKNQAKGSGTKWTKSHSNSKEKRVAHKRRRPEDFPERT 540

Query: 541 -----KRPEKTSERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDSRTPESSHRNK 589
                KRPEK SERKGKRPAVANRKAVA AS+NG+ AAPKQ GVKRKSDSRTPESSHRNK
Sbjct: 541 SERKGKRPEKMSERKGKRPAVANRKAVANASRNGI-AAPKQGGVKRKSDSRTPESSHRNK 594

[Close]

BLAST of Tan0013954 vs. NCBI nr
Match: XP_023540437.1 (nucleolar protein 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 885.6 bits (2287), Expect = 2.4e-253
Identity = 492/606 (81.19%), Postives = 528/606 (87.13%), Query Frame = 0


Query: 1   MGKKKTNNPINPPDEIETGSAPSSVFDTLFGNVGVENSGVSIFSTDNPFRRKDSNSIPAA 60
           MGKKKTN P +  +E+  GSA SSVF+TLFGNVG E+ GVSIFST+NPFRRKD++S P A
Sbjct: 1   MGKKKTNGPKSSSEEVAIGSASSSVFETLFGNVGAESDGVSIFSTENPFRRKDTSSTPVA 60

Query: 61  AAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKSRDRE 120
           A AEKS +GG+D H IDDVKSR+K KEKRVG DLDSAE GVKSSSE+KKSK+KEKSRDRE
Sbjct: 61  AVAEKSPSGGADGHTIDDVKSREKSKEKRVGMDLDSAENGVKSSSEVKKSKRKEKSRDRE 120

Query: 121 LNNGPVEKDDGESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLGEN 180
           L+N  +EKDD E GF+SR V+KKNK+ G        E+ SEFSG+LKIDEQRSD+KLG +
Sbjct: 121 LDNEVIEKDDEERGFQSRGVVKKNKRNG-------AEIGSEFSGELKIDEQRSDSKLGVD 180

Query: 181 VKLMKERKKRKRDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVTKE 240
           VKL KE+KKRKRDELEREYEAKKYGASEVA+D  EGS G VVGKKRKA+DD SEMLVTKE
Sbjct: 181 VKLTKEKKKRKRDELEREYEAKKYGASEVAEDEVEGSGGTVVGKKRKAMDDFSEMLVTKE 240

Query: 241 GFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300
           GFDDESKLLRTVFVGNLPLKVKKK LGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK
Sbjct: 241 GFDDESKLLRTVFVGNLPLKVKKKALGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300

Query: 301 KVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAPIYDPK 360
           KVNEDADSSHAYVVFKT ESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGS+PIY+PK
Sbjct: 301 KVNEDADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSSPIYEPK 360

Query: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAAN 420
           RTVFVGNLPFDVKDEELYQLFCGIENVGS+VEAVRVIRDPNVNIGKGFAYVFFKT+EAAN
Sbjct: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSNVEAVRVIRDPNVNIGKGFAYVFFKTKEAAN 420

Query: 421 SVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTPDSSK 480
           SV+N QKL+LRDR LRLFHAKPNL STPLKKRN PSTE D S AKKRAVDSGLRTPDSSK
Sbjct: 421 SVINNQKLQLRDRALRLFHAKPNLTSTPLKKRNNPSTEVDRS-AKKRAVDSGLRTPDSSK 480

Query: 481 RVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSNSKEKPVDHKR---------- 540
           R TPKA VASYQGLRASK GSQKK  AKG+ TKW KS+SNSKEK VD+KR          
Sbjct: 481 RATPKATVASYQGLRASKPGSQKKNQAKGSGTKWTKSHSNSKEKRVDYKRRRPEDFPERT 540

Query: 541 -----KRPEKTSERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDSRTPESSHRNK 592
                KRPEK SERKGKRPAVANRKAVA AS+NGV AAPKQ G KRKSDSRTPESSHRNK
Sbjct: 541 SERKGKRPEKMSERKGKRPAVANRKAVANASRNGV-AAPKQGGAKRKSDSRTPESSHRNK 597

[Close]

BLAST of Tan0013954 vs. ExPASy TrEMBL
Match: A0A6J1E378 (nucleolar protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111430358 PE=4 SV=1)

HSP 1 Score: 898.7 bits (2321), Expect = 1.3e-257
Identity = 500/606 (82.51%), Postives = 531/606 (87.62%), Query Frame = 0


Query: 1   MGKKKTNNPINPPDEIETGSAPSSVFDTLFGNVGVENSGVSIFSTDNPFRRKDSNSIPAA 60
           MGKKKTN P +  +E+  GSAPSSVF+TLFGNVG E+ GVSIFSTDNPFRRKD++  P A
Sbjct: 1   MGKKKTNGPKSSSEEVAIGSAPSSVFETLFGNVGAESDGVSIFSTDNPFRRKDTSLTPVA 60

Query: 61  AAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKSRDRE 120
           A AEKS +GG+DDH IDDVKSRKK KEKRVG DLDSAE GVKSSSE+KKSK+KEKSRDRE
Sbjct: 61  AVAEKSPSGGADDHTIDDVKSRKKSKEKRVGMDLDSAENGVKSSSEVKKSKRKEKSRDRE 120

Query: 121 LNNGPVEKDDGESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLGEN 180
           L+N  +EKDD E GF+SR V+KKNK+ G        E+ SEFSG+LKIDEQRSD+KLG +
Sbjct: 121 LDNEVIEKDDEERGFQSRGVVKKNKRNG-------AEIGSEFSGELKIDEQRSDSKLGVD 180

Query: 181 VKLMKERKKRKRDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVTKE 240
           VKL KE+KKRKRDELEREYEAKKYGASEVA+D  EGS G VVGKKRKA+DD SEMLVTKE
Sbjct: 181 VKLTKEKKKRKRDELEREYEAKKYGASEVAEDEVEGSGGTVVGKKRKAMDDFSEMLVTKE 240

Query: 241 GFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300
           GFDDESKLLRTVFVGNLPLKVKKK LGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK
Sbjct: 241 GFDDESKLLRTVFVGNLPLKVKKKALGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300

Query: 301 KVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAPIYDPK 360
           KVNEDADSSHAYVVFKT ESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGS+PIYDPK
Sbjct: 301 KVNEDADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSSPIYDPK 360

Query: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAAN 420
           RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKT+EAAN
Sbjct: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTKEAAN 420

Query: 421 SVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTPDSSK 480
           SV+N QKL+LRDR LRLFHAKPNL STPLKKRN PSTE D S AKKRAVDSGLRTPDSSK
Sbjct: 421 SVINNQKLQLRDRALRLFHAKPNLTSTPLKKRNNPSTEVDRS-AKKRAVDSGLRTPDSSK 480

Query: 481 RVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSNSKEKPVDHKR---------- 540
           RVTPKA VASYQGLRASK GSQKK  AKG+ TKW KS+SNSKEK V HKR          
Sbjct: 481 RVTPKATVASYQGLRASKPGSQKKNQAKGSGTKWTKSHSNSKEKRVAHKRRRPEDFPERT 540

Query: 541 -----KRPEKTSERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDSRTPESSHRNK 592
                KRPEK SERKGKRPAVANRKAVA AS+NGV AAPKQ GVKRKSDSRTPESSHRNK
Sbjct: 541 SERKGKRPEKMSERKGKRPAVANRKAVANASRNGV-AAPKQGGVKRKSDSRTPESSHRNK 597

[Close]

BLAST of Tan0013954 vs. ExPASy TrEMBL
Match: A0A6J1KUP0 (nucleolar protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111498364 PE=4 SV=1)

HSP 1 Score: 888.3 bits (2294), Expect = 1.8e-254
Identity = 494/606 (81.52%), Postives = 529/606 (87.29%), Query Frame = 0


Query: 1   MGKKKTNNPINPPDEIETGSAPSSVFDTLFGNVGVENSGVSIFSTDNPFRRKDSNSIPAA 60
           MGKKKTN+P +  +E+  GSAPSSVF+TLFGNVG E+ GVSIFST+NPFRRKD++S P A
Sbjct: 1   MGKKKTNDPKSSSEEVAIGSAPSSVFETLFGNVGAESDGVSIFSTENPFRRKDTSSTPLA 60

Query: 61  AAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKSRDRE 120
           A AEKS +GG+DDH IDDVKSRKK KEKRVG DLDSAE GVKSSS++KKSK+K+KSRDRE
Sbjct: 61  AVAEKSPSGGADDHTIDDVKSRKKSKEKRVGMDLDSAENGVKSSSQVKKSKRKDKSRDRE 120

Query: 121 LNNGPVEKDDGESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLGEN 180
           L+N  +EKDD E GF+SR V+KKNK+ G        E+ SEFSG+LKIDEQRSD+KLG +
Sbjct: 121 LDNEVIEKDDEERGFQSRGVVKKNKRNG-------AEIGSEFSGELKIDEQRSDSKLGVD 180

Query: 181 VKLMKERKKRKRDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVTKE 240
           VKL KE+KKRKRDELEREYEAKKYGASEVA+D  EGS G VVGKKRKA+DD SEMLVTKE
Sbjct: 181 VKLTKEKKKRKRDELEREYEAKKYGASEVAEDEVEGSGGTVVGKKRKAMDDFSEMLVTKE 240

Query: 241 GFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300
           GFDDESKLLRTVFVGNLPLKVKKK LGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK
Sbjct: 241 GFDDESKLLRTVFVGNLPLKVKKKALGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSK 300

Query: 301 KVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAPIYDPK 360
           KVNEDADSSHAYVVFKT ESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGS+PIYDPK
Sbjct: 301 KVNEDADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSSPIYDPK 360

Query: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAAN 420
           RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKT+EAAN
Sbjct: 361 RTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTKEAAN 420

Query: 421 SVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTPDSSK 480
           SV+N QKL+LRDR LRLFHAKPNL STPLKKRN PSTE D S AKKRAVDSGLRTPDSSK
Sbjct: 421 SVINNQKLQLRDRALRLFHAKPNLTSTPLKKRNNPSTEVDRSSAKKRAVDSGLRTPDSSK 480

Query: 481 RVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSNSKEKPVDHKR---------- 540
           R   KA VASYQGLRASK  SQKK  AKG+ TKW KS+SNSKEK VDHKR          
Sbjct: 481 RA--KATVASYQGLRASKPVSQKKNQAKGSGTKWTKSHSNSKEKRVDHKRRRPEDFPEST 540

Query: 541 -----KRPEKTSERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDSRTPESSHRNK 592
                KRPEK SERKGKRPAVANRKAVA AS+NGV AAPKQ GVKRKSDSRTPESSHRNK
Sbjct: 541 SERKGKRPEKMSERKGKRPAVANRKAVANASRNGV-AAPKQGGVKRKSDSRTPESSHRNK 596

[Close]

BLAST of Tan0013954 vs. ExPASy TrEMBL
Match: A0A6J1CWE3 (nucleolar protein 12 OS=Momordica charantia OX=3673 GN=LOC111014841 PE=4 SV=1)

HSP 1 Score: 840.1 bits (2169), Expect = 5.6e-240
Identity = 477/616 (77.44%), Postives = 524/616 (85.06%), Query Frame = 0


Query: 1   MGKKKTNNPINPPDEIETGSAPSSVFDTLFGNVGVENSGVSIFSTDNPFRRK----DSNS 60
           MGKKKT++P NP + + + SA SSVF+TLFGNVGV++ GVSIFS+DNPFRR+    DS+S
Sbjct: 1   MGKKKTSDPKNPREAMASLSASSSVFETLFGNVGVQSGGVSIFSSDNPFRRRHQAADSDS 60

Query: 61  IPAAAAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKS 120
           IP AAAAE++   GS+DH +DDVKS K GKEKR G DL SAEE  KSSSEIKKSK+KEK+
Sbjct: 61  IP-AAAAEETPGAGSNDHIVDDVKSLKNGKEKRAGNDLGSAEEASKSSSEIKKSKRKEKN 120

Query: 121 RD-RELNNGPVEKDDGES---GFESRSVLKKNKKKGDVSGSE---TLEMSSEFSGKLKID 180
           RD R+L NG +E++ GE+   G +S  VLKKNK+KG  SGSE   T E S EFSG LK++
Sbjct: 121 RDHRDLGNGAIEEEGGENGGLGSQSLGVLKKNKRKGSASGSEINDTKETSPEFSGALKVE 180

Query: 181 EQ-------------RSDNKLGENVKLMKERKKRKRDELEREYEAKKYGASEVADDGEEG 240
           EQ             R+D+KLGE  KLMKE+KKRKRDELEREYEA+KYGASEVA+DGEEG
Sbjct: 181 EQSNRKLNPRSKTGERTDSKLGEVGKLMKEKKKRKRDELEREYEARKYGASEVAEDGEEG 240

Query: 241 SWGIVVGKKRKALDDPSEMLVTKEGFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEI 300
           S G V GKKRKALDDPSEMLV+KEGFDDESKLLRTVFVGNLPLKVKKK LGKEFS+FGEI
Sbjct: 241 SGGNVAGKKRKALDDPSEMLVSKEGFDDESKLLRTVFVGNLPLKVKKKALGKEFSRFGEI 300

Query: 301 ESVRIRSVPLANSKKPRKGAILSKKVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNH 360
           ESVRIRSVPLANSKKPRKGAILSKKVNE A+SSHAY+VFK VESAQASLSHNMAVFAGNH
Sbjct: 301 ESVRIRSVPLANSKKPRKGAILSKKVNESAESSHAYIVFKMVESAQASLSHNMAVFAGNH 360

Query: 361 IRVDRACPPRKKLKVGSAPIYDPKRTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRV 420
           IRVDRACPPRKKLKVGSAPIYDPKRTVFVGNLPFDVKDEELYQLFCGI+N+G+SVEAVRV
Sbjct: 361 IRVDRACPPRKKLKVGSAPIYDPKRTVFVGNLPFDVKDEELYQLFCGIDNLGASVEAVRV 420

Query: 421 IRDPNVNIGKGFAYVFFKTREAANSVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPS 480
           IRDPNVNIGKGFAYVFFKTREAANSVVNKQKLELRDR+LRLFHA PNL STPLKKR++P 
Sbjct: 421 IRDPNVNIGKGFAYVFFKTREAANSVVNKQKLELRDRSLRLFHANPNLVSTPLKKRSRPP 480

Query: 481 TEADHSPAKKRAVDSGLRTPDSSKRVTPKAPVASYQGLRASKTGS-QKKIHAKGNSTKWP 540
           TEAD +PAKK AV  G  TPDSSKR TPK+  ASYQGLR+SKTGS QKK   K    KWP
Sbjct: 481 TEADRTPAKKMAVGPGSWTPDSSKRATPKSTPASYQGLRSSKTGSAQKKTGTKRTGLKWP 540

Query: 541 KSYSNSKEKPVDHKRKRPEKTSERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDS 592
           KS SNSKEKPVDHKRK+PEKT ERKGKRPAVANRKA A+ASKNG  AAPKQ G KRKS S
Sbjct: 541 KSNSNSKEKPVDHKRKKPEKTPERKGKRPAVANRKAEARASKNG-GAAPKQAGAKRKSGS 600

[Close]

BLAST of Tan0013954 vs. ExPASy TrEMBL
Match: A0A5A7UHL8 (Nucleolar protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001480 PE=4 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 2.6e-229
Identity = 461/596 (77.35%), Postives = 493/596 (82.72%), Query Frame = 0


Query: 1   MGKKKTNNPINPPDEIETGSAPSSVFDTLFGNVGVENSGVSIFSTDNPFRRKDSNSIPAA 60
           MGK K  +  NPPDEI T + P SVFDTLFG+ GVEN  VSIFS+DNPFRRKDS+SI   
Sbjct: 1   MGKNKITDLKNPPDEIPTVATPFSVFDTLFGSAGVENPTVSIFSSDNPFRRKDSDSISPP 60

Query: 61  AAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKK--KEKSRD 120
            A                  SR KGKEKRVG DLDS  EGVK+SSEIKKSKK  KEKSRD
Sbjct: 61  LAE----------------NSRTKGKEKRVGIDLDST-EGVKTSSEIKKSKKKEKEKSRD 120

Query: 121 RELNNGPVEKDDGESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLG 180
           REL+N     DDGE GFES+  LK N+KKG   GSET E S  F            +KLG
Sbjct: 121 RELDN---VDDDGERGFESQGGLKDNRKKGTALGSETSEKSRGF----------DRSKLG 180

Query: 181 ENVKLMKERKKRKRDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVT 240
           ENVKLMKERKKRKRDELEREYEAKKYG S+VA+D  EGS G VVGKKRKALDDPSEMLVT
Sbjct: 181 ENVKLMKERKKRKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVT 240

Query: 241 KEGFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVP--LANSKKPRKGA 300
           KEGFDDESKLLRTVFVGNLPLKVKKK L KEFSQFGEI+SVRIRSVP  +ANSKKPRKGA
Sbjct: 241 KEGFDDESKLLRTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGA 300

Query: 301 ILSKKVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAPI 360
           I+SKK+NE ADSSHAYVVFKT ESAQASLSHNMAVFAGNHIRVDRACPP KKLKVG+ PI
Sbjct: 301 IISKKLNEAADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPI 360

Query: 361 YDPKRTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTR 420
           YDPKRTVFVGNLPFDVKDEELYQLFCGI+ +GSSVEAVRVIRDP VN+GKGFAYVFFKTR
Sbjct: 361 YDPKRTVFVGNLPFDVKDEELYQLFCGIDTMGSSVEAVRVIRDPKVNVGKGFAYVFFKTR 420

Query: 421 EAANSVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTP 480
           EAANSVVN QKLELR RTLRLFHAK N  STP KKRN+P TEADH+PAKK AVDSGL TP
Sbjct: 421 EAANSVVNNQKLELRGRTLRLFHAKTNPTSTPFKKRNRPPTEADHTPAKKNAVDSGLGTP 480

Query: 481 DSSKRVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSNSKEKPVDH-KRKRPEK 540
           DSSKRVTPKA  ASYQGLRASK+GSQKKIH KG+STKWPKS+SNSKEKP+DH KRK PEK
Sbjct: 481 DSSKRVTPKATNASYQGLRASKSGSQKKIHTKGSSTKWPKSHSNSKEKPIDHKKRKGPEK 540

Query: 541 TSERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDSRTPESSHRNKRIKRLR 592
           TSERKGKRPAVANRKAVA A+KNG+ A PKQ G+KRKSDSR+P SSHRNKR+K+ R
Sbjct: 541 TSERKGKRPAVANRKAVANATKNGI-ATPKQAGLKRKSDSRSPGSSHRNKRVKKFR 565

[Close]

BLAST of Tan0013954 vs. ExPASy TrEMBL
Match: A0A1S3BK91 (nucleolar protein 12 OS=Cucumis melo OX=3656 GN=LOC103490769 PE=4 SV=1)

HSP 1 Score: 803.9 bits (2075), Expect = 4.5e-229
Identity = 460/596 (77.18%), Postives = 492/596 (82.55%), Query Frame = 0


Query: 1   MGKKKTNNPINPPDEIETGSAPSSVFDTLFGNVGVENSGVSIFSTDNPFRRKDSNSIPAA 60
           MGK K  +  NPPDEI T + P SVFDTLFG+ GVEN  VSIFS+DNPFRRKDS+SI   
Sbjct: 1   MGKNKITDLKNPPDEIPTVATPFSVFDTLFGSAGVENPSVSIFSSDNPFRRKDSDSISPP 60

Query: 61  AAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKK--KEKSRD 120
            A                  SR KGKEKRVG DLDS  EGVK+SSEIKKSKK  KEKSRD
Sbjct: 61  LAE----------------NSRTKGKEKRVGIDLDST-EGVKTSSEIKKSKKKEKEKSRD 120

Query: 121 RELNNGPVEKDDGESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKLG 180
           REL+N     DDGE GFES+  LK N+KKG   GSET E S  F            +KLG
Sbjct: 121 RELDN---VDDDGERGFESQGGLKDNRKKGTALGSETSEKSRGF----------DRSKLG 180

Query: 181 ENVKLMKERKKRKRDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLVT 240
           ENVKLMKERKKRKRDELEREYEAKKYG S+VA+D  EGS G VVGKKRKALDDPSEMLVT
Sbjct: 181 ENVKLMKERKKRKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVT 240

Query: 241 KEGFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVP--LANSKKPRKGA 300
           KEGFDDESKLLRTVFVGNLPLKVKKK L KEFSQFGEI+SVRIRSVP  +ANSKKPRKGA
Sbjct: 241 KEGFDDESKLLRTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGA 300

Query: 301 ILSKKVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLKVGSAPI 360
           I+SKK+NE ADSSHAYVVFKT ESAQASLSHNMAVFAGNHIRVDRACPP KKLKVG+ PI
Sbjct: 301 IISKKLNEAADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPI 360

Query: 361 YDPKRTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTR 420
           YDPKRTVFVGNLPFDVKDEELYQLFCGI+ +GSSVEAVRVIRDP VN+GKGFAYVFFKTR
Sbjct: 361 YDPKRTVFVGNLPFDVKDEELYQLFCGIDTMGSSVEAVRVIRDPKVNVGKGFAYVFFKTR 420

Query: 421 EAANSVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTP 480
           EA NSVVN QKLELR RTLRLFHAK N  STP KKRN+P TEADH+PAKK AVDSGL TP
Sbjct: 421 EAVNSVVNNQKLELRGRTLRLFHAKTNPTSTPFKKRNRPPTEADHTPAKKNAVDSGLGTP 480

Query: 481 DSSKRVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSNSKEKPVDH-KRKRPEK 540
           DSSKRVTPKA  ASYQGLRASK+GSQKKIH KG+STKWPKS+SNSKEKP+DH KRK PEK
Sbjct: 481 DSSKRVTPKATNASYQGLRASKSGSQKKIHTKGSSTKWPKSHSNSKEKPIDHKKRKGPEK 540

Query: 541 TSERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDSRTPESSHRNKRIKRLR 592
           TSERKGKRPAVANRKAVA A+KNG+ A PKQ G+KRKSDSR+P SSHRNKR+K+ R
Sbjct: 541 TSERKGKRPAVANRKAVANATKNGI-ATPKQAGLKRKSDSRSPGSSHRNKRVKKFR 565

[Close]

BLAST of Tan0013954 vs. TAIR 10
Match: AT5G46840.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 383.6 bits (984), Expect = 2.8e-106
Identity = 276/599 (46.08%), Postives = 357/599 (59.60%), Query Frame = 0


Query: 1   MGKKKT--NNPINPPDEIETGSAPSSVFDTLFGNVGVENSG-VSIFSTDNPFRRKDSNSI 60
           MGKKK+    P +  DE +T      +F TLF    VE+SG  S+FS DNPFRRK    I
Sbjct: 1   MGKKKSKVTEPESQNDESQT------IFSTLFSG-EVESSGFASLFSADNPFRRKQPQEI 60

Query: 61  PAAAAAEKSSNGGSDDHNIDDVKSRKKGKEKRVGTDLDSAEEGVKSSSEIKKSKKKEKSR 120
             ++                 +   KKG ++    + +  EE      + KKSKK++K  
Sbjct: 61  KESS-----------------IPDEKKGDKR--NAENEEEEEETDLPVKTKKSKKEKKLT 120

Query: 121 DRELNNGPVEKDDGESGFESRSVLKKNKKKGDVSGSETLEMSSEFSGKLKIDEQRSDNKL 180
           D              SG E                 ET+  + E SG             
Sbjct: 121 D--------------SGDE----------------KETISEAVEESG------------- 180

Query: 181 GENVKLMKERKKRKRDELEREYEAKKYGASEVADDGEEGSWGIVVGKKRKALDDPSEMLV 240
                L+ +RKKRKRDE+E EYE KKYG+ E+ +          VG+KRK  D+ ++ +V
Sbjct: 181 -----LVSKRKKRKRDEIENEYETKKYGSVEMKEK--------KVGEKRKKADEVADTMV 240

Query: 241 TKEGFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAI 300
           +KEGFDDESKLLRTVFVGNLPLKVKKK + KEFS+FGE+ESVRIRSVP+ +SK+ RKGAI
Sbjct: 241 SKEGFDDESKLLRTVFVGNLPLKVKKKVILKEFSKFGEVESVRIRSVPIVDSKRTRKGAI 300

Query: 301 LSKKVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDRACPPRKKLK-VGSAPI 360
           + K++NE A S HAYVVF+T +SA ASL+HNM++  GNH+RVDRACPPRKK K      +
Sbjct: 301 MLKQINEKASSVHAYVVFETEQSAAASLAHNMSLIDGNHVRVDRACPPRKKQKGHDDTHL 360

Query: 361 YDPKRTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTR 420
           YDPKRTVF+GNLPFDVKDEE+YQLF G  N+ +S+EAVRVIRDP++NIGKG AYV FKTR
Sbjct: 361 YDPKRTVFMGNLPFDVKDEEVYQLFTGKSNLENSIEAVRVIRDPHLNIGKGIAYVLFKTR 420

Query: 421 EAANSVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEADHSPAKKRAVDSGLRTP 480
           EAAN V+ K  L+LR+R LR+   KP+   TP K+++ PS EA +SPA+KR     + TP
Sbjct: 421 EAANLVLKKGYLKLRERELRISRVKPD---TPSKRKSNPS-EA-YSPAQKRLQKDKVVTP 480

Query: 481 DSSKRVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSNSKEKP-----VDHKRK 540
             + +        SYQG+RASK+G  KK       T + KS + +K +P      D+K+ 
Sbjct: 481 TPTGKAN-----LSYQGVRASKSGDDKK-------TPYQKSSAQTKMRPRGSSSNDNKKS 500

Query: 541 RPEKTS-ERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSDSRTPESSHRNKRIKR 590
                S ER  KRPAVA RKA A A  +  +   +  G KRK ++RTPES  + K+ KR
Sbjct: 541 GNNSASKERSQKRPAVAARKAKANAKGSKESGGKRFAGTKRKQENRTPESFSKKKKTKR 500

[Close]

BLAST of Tan0013954 vs. TAIR 10
Match: AT5G46840.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 350.5 bits (898), Expect = 2.6e-96
Identity = 210/375 (56.00%), Postives = 267/375 (71.20%), Query Frame = 0


Query: 222 VGKKRKALDDPSEMLVTKEGFDDESKLLRTVFVGNLPLKVKKKTLGKEFSQFGEIESVRI 281
           VG+KRK  D+ ++ +V+KEGFDDESKLLRTVFVGNLPLKVKKK + KEFS+FGE+ESVRI
Sbjct: 6   VGEKRKKADEVADTMVSKEGFDDESKLLRTVFVGNLPLKVKKKVILKEFSKFGEVESVRI 65

Query: 282 RSVPLANSKKPRKGAILSKKVNEDADSSHAYVVFKTVESAQASLSHNMAVFAGNHIRVDR 341
           RSVP+ +SK+ RKGAI+ K++NE A S HAYVVF+T +SA ASL+HNM++  GNH+RVDR
Sbjct: 66  RSVPIVDSKRTRKGAIMLKQINEKASSVHAYVVFETEQSAAASLAHNMSLIDGNHVRVDR 125

Query: 342 ACPPRKKLK-VGSAPIYDPKRTVFVGNLPFDVKDEELYQLFCGIENVGSSVEAVRVIRDP 401
           ACPPRKK K      +YDPKRTVF+GNLPFDVKDEE+YQLF G  N+ +S+EAVRVIRDP
Sbjct: 126 ACPPRKKQKGHDDTHLYDPKRTVFMGNLPFDVKDEEVYQLFTGKSNLENSIEAVRVIRDP 185

Query: 402 NVNIGKGFAYVFFKTREAANSVVNKQKLELRDRTLRLFHAKPNLASTPLKKRNKPSTEAD 461
           ++NIGKG AYV FKTREAAN V+ K  L+LR+R LR+   KP+   TP K+++ PS EA 
Sbjct: 186 HLNIGKGIAYVLFKTREAANLVLKKGYLKLRERELRISRVKPD---TPSKRKSNPS-EA- 245

Query: 462 HSPAKKRAVDSGLRTPDSSKRVTPKAPVASYQGLRASKTGSQKKIHAKGNSTKWPKSYSN 521
           +SPA+KR     + TP  + +        SYQG+RASK+G  KK       T + KS + 
Sbjct: 246 YSPAQKRLQKDKVVTPTPTGKAN-----LSYQGVRASKSGDDKK-------TPYQKSSAQ 305

Query: 522 SKEKP-----VDHKRKRPEKTS-ERKGKRPAVANRKAVAKASKNGVAAAPKQVGVKRKSD 581
           +K +P      D+K+      S ER  KRPAVA RKA A A  +  +   +  G KRK +
Sbjct: 306 TKMRPRGSSSNDNKKSGNNSASKERSQKRPAVAARKAKANAKGSKESGGKRFAGTKRKQE 363

Query: 582 SRTPESSHRNKRIKR 590
           +RTPES  + K+ KR
Sbjct: 366 NRTPESFSKKKKTKR 363

[Close]

BLAST of Tan0013954 vs. TAIR 10
Match: AT2G18510.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 58.2 bits (139), Expect = 2.7e-08
Identity = 55/251 (21.91%), Postives = 108/251 (43.03%), Query Frame = 0


Query: 251 TVFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSKKVNEDADSSH 310
           TV+VG L  ++ ++ L + F Q G + +V +    + N                    ++
Sbjct: 26  TVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTN-----------------LHQNY 85

Query: 311 AYVVFKTVESAQASLS-HNMAVFAGNHIRVDRACPPRKKLKVGSAPIYDPKRTVFVGNLP 370
            ++ +++ E A  ++   NM    G  IRV++A   +K L VG+         +F+GNL 
Sbjct: 86  GFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGA--------NLFIGNLD 145

Query: 371 FDVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAANSVVNK---Q 430
            DV ++ LY  F     + S+    +++RDP+    +GF ++ + + EA+++ +     Q
Sbjct: 146 PDVDEKLLYDTFSAFGVIASN---PKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQ 205

Query: 431 KLELRDRTLRLFHAKPN-------------LASTPLKKRNKPSTEADHSPAKKRAVDSGL 485
            L  R  T+   + K                A+ P  ++++P T     P       +GL
Sbjct: 206 YLSNRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPSSAPQVNGL 248

[Close]

BLAST of Tan0013954 vs. TAIR 10
Match: AT4G24770.1 (31-kDa RNA binding protein )

HSP 1 Score: 57.8 bits (138), Expect = 3.5e-08
Identity = 65/255 (25.49%), Postives = 107/255 (41.96%), Query Frame = 0


Query: 193 DELEREYEAKKYGASEVAD-DGEEGSWGIVVGKKRKALDDPSEMLVTKEGFDDESKLLRT 252
           +E E   E++     + ++ D  EG     V +  ++  D SE  V++     E      
Sbjct: 96  EETENSLESQDVSEGDESEGDASEGD----VSEGDESEGDVSEGAVSERAEFPEPSEEAK 155

Query: 253 VFVGNLPLKVKKKTLGKEFSQFGEIESVRIRSVPLANSKKPRKGAILSKKVNEDADSSHA 312
           +FVGNL   V  + L   F Q G +E   +               I +++   D      
Sbjct: 156 LFVGNLAYDVNSQALAMLFEQAGTVEIAEV---------------IYNRET--DQSRGFG 215

Query: 313 YVVFKTVESAQASL-SHNMAVFAGNHIRVDRACPPRKKLKVGSAPIYDPKRTVFVGNLPF 372
           +V   +V+ A+ ++   N     G  + V++A  PR      +  +Y+P   V+VGNLP+
Sbjct: 216 FVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAA-PRGSRPERAPRVYEPAFRVYVGNLPW 275

Query: 373 DVKDEELYQLFCGIENVGSSVEAVRVIRDPNVNIGKGFAYVFFKTREAAN---SVVNKQK 432
           DV +  L QLF      G  VEA RV+ D      +GF +V     +  N   S ++ Q 
Sbjct: 276 DVDNGRLEQLF---SEHGKVVEA-RVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQN 324

Query: 433 LELRDRTLRLFHAKP 443
           LE R   + +   +P
Sbjct: 336 LEGRAIRVNVAEERP 324

[Close]

BLAST of Tan0013954 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 45.8 bits (107), Expect = 1.4e-04
Identity = 32/113 (28.32%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 331 VFAGNHIRVDRACPPRKKLKVGSAPIYDPKRTVFVGNLPFDVKDEELYQLFCGIENVGSS 390
           V  G  + + R  P   K   G+       + +FVG +P  V ++EL   F    NV   
Sbjct: 82  VINGKQVEIKRTIP---KGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYGNV--- 141

Query: 391 VEAVRVIRDPNVNIGKGFAYVFFKTREAANSVVNK-QKLELRDRTLRLFHAKP 443
           VE  +VIRD   N  +GF +V F + E  + +++K   +++ D  + +  A+P
Sbjct: 142 VEH-QVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEP 187

The following BLAST results are available for this feature:

BLAST of Tan0013954 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13741	3.9e-28	31.55	Nucleolar protein 12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2...	[more]
Q8C5L7	2.8e-26	37.12	RNA-binding protein 34 OS=Mus musculus OX=10090 GN=Rbm34 PE=1 SV=2	[more]
Q5M9F1	3.6e-26	35.19	RNA-binding protein 34 OS=Rattus norvegicus OX=10116 GN=Rbm34 PE=1 SV=1	[more]
P42696	7.6e-24	31.64	RNA-binding protein 34 OS=Homo sapiens OX=9606 GN=RBM34 PE=1 SV=2	[more]
Q5AHI7	9.6e-19	28.40	Nucleolar protein 12 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=2375...	[more]

BLAST of Tan0013954 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922379.1	2.8e-257	82.51	nucleolar protein 12 [Cucurbita moschata]	[more]
KAG7028265.1	2.0e-255	81.35	nop12, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023005336.1	3.7e-254	81.52	nucleolar protein 12 [Cucurbita maxima]	[more]
KAG6596731.1	2.4e-253	81.43	Inositol-tetrakisphosphate 1-kinase 5, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_023540437.1	2.4e-253	81.19	nucleolar protein 12 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0013954 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E378	1.3e-257	82.51	nucleolar protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111430358 PE=4 SV=1	[more]
A0A6J1KUP0	1.8e-254	81.52	nucleolar protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111498364 PE=4 SV=1	[more]
A0A6J1CWE3	5.6e-240	77.44	nucleolar protein 12 OS=Momordica charantia OX=3673 GN=LOC111014841 PE=4 SV=1	[more]
A0A5A7UHL8	2.6e-229	77.35	Nucleolar protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139...	[more]
A0A1S3BK91	4.5e-229	77.18	nucleolar protein 12 OS=Cucumis melo OX=3656 GN=LOC103490769 PE=4 SV=1	[more]

BLAST of Tan0013954 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46840.1	2.8e-106	46.08	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46840.2	2.6e-96	56.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G18510.1	2.7e-08	21.91	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G24770.1	3.5e-08	25.49	31-kDa RNA binding protein	[more]
AT3G13224.2	1.4e-04	28.32	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 178..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 453..474
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 494..519
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 439..591
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 520..545
None	No IPR available	PANTHER	PTHR23236:SF25	RNA-BINDING PROTEIN 34	coord: 184..588
None	No IPR available	PANTHER	PTHR23236	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H	coord: 184..588
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 362..438 e-value: 3.7E-16 score: 69.7 coord: 251..340 e-value: 5.0E-10 score: 49.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 252..292 e-value: 1.4E-5 score: 24.8 coord: 363..436 e-value: 5.2E-11 score: 42.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 361..442 score: 15.920249
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 250..344 score: 12.850277
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 247..349 e-value: 3.5E-17 score: 64.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 356..447 e-value: 1.7E-19 score: 71.8
IPR034220	RBM34, RNA recognition motif 1	CDD	cd12394	RRM1_RBM34	coord: 250..340 e-value: 1.12339E-37 score: 132.384
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 245..351
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 355..451

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013954.1	Tan0013954.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding