Tan0013884 (gene) Snake gourd v1

Overview


Name	Tan0013884
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Pectin lyase-like superfamily protein
Location	LG01: 19182054 .. 19182913 (+)
RNA-Seq Expression	Tan0013884
Synteny	Tan0013884

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAGTTTCAGGTTTAATGCAATCACGAATGCAACAATCAAGAATATCAAATCAATCAATAGCAAGTCCTTCCATTTCTCAGTATTTAAAAGTCAAGACGTCACATTTGATAACATCACAATAATAGCTCCAGAAGATAGTCCCAACACAGATGGAATTCACATCTCCATGTCGTCTAAAATTAGCATCATGAATTCAATGATTGCCACTGGAGACGATTGCATATCCTTAGGTCCTGGAAGCAAAGCCATTAACATAACCAAAATTCAATGCGGTCCTGGCCATGGAATTAGCATTGGCAGCTTGGGGCAATACCCAAACGAAGAAGATGTTGTTGGAATCACAGTAAAAGACTCAATATTCTCTAACACCACGAATGGCGTCAGAATCAAATCTTGGTCGACTTCATTCTCGAGCATGGTTAACAAGATTACATTTGTCAATCTCCAAATGAACAATGTCAAAAATTCTATCATCATCGATCAGAACTACTGCCCTCATAACTCTTGTCCTCATGTCTCTTCTGATGAAGTTCAAATGGTATGAAGCTTGAAAATTCGTTGAAATTGTGCAACAATTATATCATAATAAATTATTATAAAACAAAATGAAATTCGTGATTATTGCAGATCAGTAGGTCAAAAGTGCAGATTCGAGACGTTAGATATGAAGGCATAAATGGGACTTCAAATACTAAAGTTGCAGTAGATTTTGATTGTAGTCAAGTGGCTCCATGCCAAGACATAGCACTACGAGACATTAACTTGGTATTCGGTGGCAATGATCAAGCGACTTCAAGTTGTTTTAATGTTAGGGGTTCTGCTTTTGGCTTACAATTGCCTCCTTCTTGCATTTAA

mRNA sequence

ATGCAGAGTTTCAGGTTTAATGCAATCACGAATGCAACAATCAAGAATATCAAATCAATCAATAGCAAGTCCTTCCATTTCTCAGTATTTAAAAGTCAAGACGTCACATTTGATAACATCACAATAATAGCTCCAGAAGATAGTCCCAACACAGATGGAATTCACATCTCCATGTCGTCTAAAATTAGCATCATGAATTCAATGATTGCCACTGGAGACGATTGCATATCCTTAGGTCCTGGAAGCAAAGCCATTAACATAACCAAAATTCAATGCGGTCCTGGCCATGGAATTAGCATTGGCAGCTTGGGGCAATACCCAAACGAAGAAGATGTTGTTGGAATCACAGTAAAAGACTCAATATTCTCTAACACCACGAATGGCGTCAGAATCAAATCTTGGTCGACTTCATTCTCGAGCATGGTTAACAAGATTACATTTGTCAATCTCCAAATGAACAATGTCAAAAATTCTATCATCATCGATCAGAACTACTGCCCTCATAACTCTTGTCCTCATGTCTCTTCTGATGAAGTTCAAATGATCAGTAGGTCAAAAGTGCAGATTCGAGACGTTAGATATGAAGGCATAAATGGGACTTCAAATACTAAAGTTGCAGTAGATTTTGATTGTAGTCAAGTGGCTCCATGCCAAGACATAGCACTACGAGACATTAACTTGGTATTCGGTGGCAATGATCAAGCGACTTCAAGTTGTTTTAATGTTAGGGGTTCTGCTTTTGGCTTACAATTGCCTCCTTCTTGCATTTAA

Coding sequence (CDS)

ATGCAGAGTTTCAGGTTTAATGCAATCACGAATGCAACAATCAAGAATATCAAATCAATCAATAGCAAGTCCTTCCATTTCTCAGTATTTAAAAGTCAAGACGTCACATTTGATAACATCACAATAATAGCTCCAGAAGATAGTCCCAACACAGATGGAATTCACATCTCCATGTCGTCTAAAATTAGCATCATGAATTCAATGATTGCCACTGGAGACGATTGCATATCCTTAGGTCCTGGAAGCAAAGCCATTAACATAACCAAAATTCAATGCGGTCCTGGCCATGGAATTAGCATTGGCAGCTTGGGGCAATACCCAAACGAAGAAGATGTTGTTGGAATCACAGTAAAAGACTCAATATTCTCTAACACCACGAATGGCGTCAGAATCAAATCTTGGTCGACTTCATTCTCGAGCATGGTTAACAAGATTACATTTGTCAATCTCCAAATGAACAATGTCAAAAATTCTATCATCATCGATCAGAACTACTGCCCTCATAACTCTTGTCCTCATGTCTCTTCTGATGAAGTTCAAATGATCAGTAGGTCAAAAGTGCAGATTCGAGACGTTAGATATGAAGGCATAAATGGGACTTCAAATACTAAAGTTGCAGTAGATTTTGATTGTAGTCAAGTGGCTCCATGCCAAGACATAGCACTACGAGACATTAACTTGGTATTCGGTGGCAATGATCAAGCGACTTCAAGTTGTTTTAATGTTAGGGGTTCTGCTTTTGGCTTACAATTGCCTCCTTCTTGCATTTAA

Protein sequence

MQSFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKISIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIFSNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMISRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFNVRGSAFGLQLPPSCI

Homology

[Close]

BLAST of Tan0013884 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.4e-61
Identity = 115/251 (45.82%), Postives = 168/251 (66.93%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           + RF+ + +A +++I S+NSK FH +V + +D+TF ++T+ AP  S NTDGIH+ +S  +
Sbjct: 130 NLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGV 189

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
           +I N+ IATGDDCIS+GPGS+ + IT++ CGPGHGISIGSLG+Y NE++V GITVK   F
Sbjct: 190 TITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTF 249

Query: 123 SNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMI 182
           S T NGVR+K+W  S       +TF +L MNNV+N +I+DQ YCP+  C   +       
Sbjct: 250 SGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAP------ 309

Query: 183 SRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVF-GGNDQATSSCFN 242
             S++++ ++ +  I GTS  KVAV   CS   PC ++ + +INL + G    ATS+C N
Sbjct: 310 --SRIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSN 369

Query: 243 VRGSAFGLQLP 253
           V+ +  G Q+P
Sbjct: 370 VKPTFSGKQVP 372

[Close]

BLAST of Tan0013884 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-56
Identity = 113/251 (45.02%), Postives = 167/251 (66.53%), Query Frame = 0


Query: 6   FNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKISIM 65
           FN++TN+TIK+I +++SKSFH +V + +++TF    + AP +SPNTDGIH+S SS ++I 
Sbjct: 146 FNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVNIT 205

Query: 66  NSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIFSNT 125
           +S  +TGDDCIS+G  ++ + IT++ CGPGHGIS+GSLG  P+E+ VVG+ V++  F+NT
Sbjct: 206 DSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFTNT 265

Query: 126 TNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMISRS 185
            NGVRIK+W  S   +VN + F ++ + NV N ++IDQ YCP N C             S
Sbjct: 266 DNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKC--------NKDLPS 325

Query: 186 KVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGND-QATSSCFNVRG 245
           +V+I  V ++ I GTS T+ AV    S+  PC+ I + DI++ + G +  A SSC N++ 
Sbjct: 326 QVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKP 385

Query: 246 SAFGLQLPPSC 256
           S  G Q PP C
Sbjct: 386 SLKGKQNPPVC 388

[Close]

BLAST of Tan0013884 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.5e-56
Identity = 112/253 (44.27%), Postives = 162/253 (64.03%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           + RF+ +TNA I++I S +SK FH +VF  +++T + + I AP++SPNTDGIH+  S  +
Sbjct: 151 NIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 210

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
           +I+ S I TGDDCIS+G G+K + I +I CGPGHGISIGSLG++ NEE V GI + +   
Sbjct: 211 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 270

Query: 123 SNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMI 182
           +NT+NG RIK+W       V++I F ++ MNNV + I+IDQ YCP N C        +  
Sbjct: 271 TNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKC--------KKN 330

Query: 183 SRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFNV 242
             SKV++ ++ ++ I GTS    A+ F CS  +PCQ++ L DI++   G + ATS C NV
Sbjct: 331 EESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAEPATSQCLNV 390

Query: 243 RGSAFGLQLPPSC 256
           +    G   P  C
Sbjct: 391 KPITIGKLNPIPC 395

[Close]

BLAST of Tan0013884 vs. ExPASy Swiss-Prot
Match: P35337 (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-56
Identity = 113/256 (44.14%), Postives = 162/256 (63.28%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           S RF+ + NA IK++ S+++K+FHF+V   +++TFDNI IIAP +SPNTDGIH+     +
Sbjct: 140 SVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGV 199

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
            I+N+ IATGDDCIS+G G K + I K+ CGPGHGIS+GSLG+Y  E+DV  ITVK+   
Sbjct: 200 KILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKNCTL 259

Query: 123 SNTTNGVRIKSW-STSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQM 182
             T+NG+RIK+W S + ++    I F ++ +N V N I+IDQ YCP N C       +++
Sbjct: 260 EGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIKL 319

Query: 183 ISRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGND-QATSSCF 242
           +        D+ +  I GTS  K AV   CS+  PC+++ + DIN+ + G D   T  C 
Sbjct: 320 V--------DITFRNIRGTSENKDAVKLLCSKGHPCENVEIGDINIEYTGPDGPPTFECT 379

Query: 243 NVRGSAFGLQLPPSCI 257
           NV     G Q P +C+
Sbjct: 380 NVTPKLVGAQNPKACV 387

[Close]

BLAST of Tan0013884 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.2e-56
Identity = 112/253 (44.27%), Postives = 162/253 (64.03%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           + RF+ +TNA I++I S +SK FH +VF  +++T + + I AP++SPNTDGIH+  S  +
Sbjct: 151 NIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 210

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
           +I+ S I TGDDCIS+G G+K + I +I CGPGHGISIGSLG++ NEE V GI + +   
Sbjct: 211 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 270

Query: 123 SNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMI 182
           +NT+NG RIK+W       V++I F ++ MNNV + I+IDQ YCP N C        +  
Sbjct: 271 TNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKC--------KKN 330

Query: 183 SRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFNV 242
             SKV++ ++ ++ I GTS    A+ F CS  +PCQ++ L DI++   G + ATS C NV
Sbjct: 331 EESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAEPATSQCLNV 390

Query: 243 RGSAFGLQLPPSC 256
           +    G   P  C
Sbjct: 391 KPITSGKLNPIPC 395

[Close]

BLAST of Tan0013884 vs. NCBI nr
Match: XP_031738767.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 1.4e-93
Identity = 177/254 (69.69%), Postives = 208/254 (81.89%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           S R N I NA I NIKS NSK FHF++   +DVTFD++T+IAP +SPNTDGIHIS SS I
Sbjct: 113 SMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGI 172

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
           +IM+S I TGDDCISLGPGSK INIT IQCGPGHGISIGSLG+YPNEEDV  +TV+DS F
Sbjct: 173 NIMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF 232

Query: 123 SNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMI 182
             T+NGVRIK+WS+S+SSMV+K+TF+NLQMNNVKN IIIDQNYCP  SC        +M+
Sbjct: 233 IGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCP-GSC-----GSQKMM 292

Query: 183 SRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFNV 242
           S+S VQI+DVRYEGI G+SNT+VAVDF+CS+V PCQ I L+DINL F G  + TS+C NV
Sbjct: 293 SKSMVQIKDVRYEGIRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCHNV 352

Query: 243 RGSAFGLQLPPSCI 257
           RGSAFG QLPPSC+
Sbjct: 353 RGSAFGHQLPPSCL 360

[Close]

BLAST of Tan0013884 vs. NCBI nr
Match: KAA0065794.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYJ96533.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 352.1 bits (902), Expect = 4.2e-93
Identity = 174/256 (67.97%), Postives = 208/256 (81.25%), Query Frame = 0


Query: 1   MQSFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSS 60
           + S + N I  A+IKNI S +SK FHF+V  S+DVTFD++T++AP DSPNTDGIHIS SS
Sbjct: 103 LSSMKLNNINTASIKNISSYDSKLFHFAVHGSRDVTFDHVTVVAPGDSPNTDGIHISSSS 162

Query: 61  KISIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDS 120
            I+IM+S I TGDDCISLGPGSK+INIT + CGPGHGISIGSLG+YPNEE+V  +TV+DS
Sbjct: 163 GINIMHSTIGTGDDCISLGPGSKSINITNVYCGPGHGISIGSLGKYPNEENVFEVTVRDS 222

Query: 121 IFSNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQ 180
            F  TTNG RIKSWS+S+SSMV+K+TFVNLQMNNVKN IIIDQ+YCP +  P+       
Sbjct: 223 TFVGTTNGARIKSWSSSYSSMVSKVTFVNLQMNNVKNPIIIDQSYCPDSCGPN------- 282

Query: 181 MISRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCF 240
            +S+SKVQI DVRYEGI G+SNT+VAVDF+CSQV PCQ I L+DINL F G  Q+TS C 
Sbjct: 283 EMSKSKVQIEDVRYEGIRGSSNTQVAVDFECSQVLPCQGIVLQDINLTFNGGGQSTSICH 342

Query: 241 NVRGSAFGLQLPPSCI 257
           NV+GSAFG QLPPSC+
Sbjct: 343 NVKGSAFGQQLPPSCL 351

[Close]

BLAST of Tan0013884 vs. NCBI nr
Match: KAA0065793.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYJ96532.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 352.1 bits (902), Expect = 4.2e-93
Identity = 173/254 (68.11%), Postives = 208/254 (81.89%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           S +   I NA I NIKS NSK FHF+V   +DVTFD++T+IAP +SPNTDGIH+S+SS I
Sbjct: 111 SMKLTGINNARISNIKSYNSKLFHFAVHGCRDVTFDHVTVIAPANSPNTDGIHVSLSSGI 170

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
           +IM+S I TGDDCISLGPGSK INIT +QCGPGHGISIGSLG+YPNEEDV  +TV+DS F
Sbjct: 171 NIMHSTIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF 230

Query: 123 SNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMI 182
             TTNG RIK+WS+S+S+MV+KITF+NLQMNNVKN IIIDQ+YCPH+  P+        +
Sbjct: 231 LGTTNGARIKTWSSSYSNMVSKITFLNLQMNNVKNPIIIDQSYCPHSCGPN-------EM 290

Query: 183 SRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFNV 242
           S+SKVQI+DVRYEGI G+SNT+VAVDF+CSQV PCQ I L+DINL F G  + T++C NV
Sbjct: 291 SQSKVQIKDVRYEGIRGSSNTQVAVDFECSQVFPCQGIVLQDINLPFNGGGRTTANCHNV 350

Query: 243 RGSAFGLQLPPSCI 257
           RGSAFG QLPPSC+
Sbjct: 351 RGSAFGHQLPPSCL 357

[Close]

BLAST of Tan0013884 vs. NCBI nr
Match: XP_016900599.1 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 351.7 bits (901), Expect = 5.4e-93
Identity = 172/254 (67.72%), Postives = 208/254 (81.89%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           S +   I NA I NIKS NSK FHF+V   +DVTFD++T+IAP +SPNTDGIH+S+SS I
Sbjct: 111 SMKLTGINNARISNIKSYNSKLFHFAVHGCRDVTFDHVTVIAPANSPNTDGIHVSLSSGI 170

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
           +IM+S I TGDDCISLGPGSK INIT +QCGPGHGISIGSLG+YPNEEDV  +TV+DS F
Sbjct: 171 NIMHSTIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF 230

Query: 123 SNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMI 182
             TTNG RIK+WS+S+S+MV+K+TF+NLQMNNVKN IIIDQ+YCPH+  P+        +
Sbjct: 231 LGTTNGARIKTWSSSYSNMVSKVTFLNLQMNNVKNPIIIDQSYCPHSCGPN-------EM 290

Query: 183 SRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFNV 242
           S+SKVQI+DVRYEGI G+SNT+VAVDF+CSQV PCQ I L+DINL F G  + T++C NV
Sbjct: 291 SQSKVQIKDVRYEGIRGSSNTQVAVDFECSQVFPCQGIVLQDINLPFNGGGRTTANCHNV 350

Query: 243 RGSAFGLQLPPSCI 257
           RGSAFG QLPPSC+
Sbjct: 351 RGSAFGHQLPPSCL 357

[Close]

BLAST of Tan0013884 vs. NCBI nr
Match: XP_038904215.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 347.8 bits (891), Expect = 7.9e-92
Identity = 174/254 (68.50%), Postives = 206/254 (81.10%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           S + N I   +IKNI S NSK FHF+V   +DVTFD++T++AP DSPNTDGIHIS SS I
Sbjct: 107 SMKLNNINTMSIKNISSYNSKLFHFAVHGCRDVTFDHVTVVAPADSPNTDGIHISSSSGI 166

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
           +IM+S+I TGDDCISLGPGSK INIT +QCGPGHGISIGSLG+YPNEEDV  +T++DS F
Sbjct: 167 NIMHSVIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTIRDSTF 226

Query: 123 SNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMI 182
             T+NGVRIKSWS+S+SSMV+ +TF+NLQMNNVKN IIIDQ YCP    PH   DE   +
Sbjct: 227 IGTSNGVRIKSWSSSYSSMVSNVTFLNLQMNNVKNPIIIDQMYCPGTCGPH---DE---M 286

Query: 183 SRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFNV 242
           S+SKVQI+DVRYEGI GTS T+VAV+F+C+QV PCQDI L+DINL F G  Q TS C NV
Sbjct: 287 SKSKVQIKDVRYEGIRGTSITQVAVNFECNQVFPCQDIMLQDINLPFNGGGQPTSICHNV 346

Query: 243 RGSAFGLQLPPSCI 257
           +GSAFG QLPPSC+
Sbjct: 347 KGSAFGQQLPPSCL 354

[Close]

BLAST of Tan0013884 vs. ExPASy TrEMBL
Match: A0A0A0L7H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063610 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.9e-94
Identity = 177/254 (69.69%), Postives = 208/254 (81.89%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           S R N I NA I NIKS NSK FHF++   +DVTFD++T+IAP +SPNTDGIHIS SS I
Sbjct: 113 SMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGI 172

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
           +IM+S I TGDDCISLGPGSK INIT IQCGPGHGISIGSLG+YPNEEDV  +TV+DS F
Sbjct: 173 NIMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF 232

Query: 123 SNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMI 182
             T+NGVRIK+WS+S+SSMV+K+TF+NLQMNNVKN IIIDQNYCP  SC        +M+
Sbjct: 233 IGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCP-GSC-----GSQKMM 292

Query: 183 SRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFNV 242
           S+S VQI+DVRYEGI G+SNT+VAVDF+CS+V PCQ I L+DINL F G  + TS+C NV
Sbjct: 293 SKSMVQIKDVRYEGIRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCHNV 352

Query: 243 RGSAFGLQLPPSCI 257
           RGSAFG QLPPSC+
Sbjct: 353 RGSAFGHQLPPSCL 360

[Close]

BLAST of Tan0013884 vs. ExPASy TrEMBL
Match: A0A5D3BB58 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001870 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 2.0e-93
Identity = 174/256 (67.97%), Postives = 208/256 (81.25%), Query Frame = 0


Query: 1   MQSFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSS 60
           + S + N I  A+IKNI S +SK FHF+V  S+DVTFD++T++AP DSPNTDGIHIS SS
Sbjct: 103 LSSMKLNNINTASIKNISSYDSKLFHFAVHGSRDVTFDHVTVVAPGDSPNTDGIHISSSS 162

Query: 61  KISIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDS 120
            I+IM+S I TGDDCISLGPGSK+INIT + CGPGHGISIGSLG+YPNEE+V  +TV+DS
Sbjct: 163 GINIMHSTIGTGDDCISLGPGSKSINITNVYCGPGHGISIGSLGKYPNEENVFEVTVRDS 222

Query: 121 IFSNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQ 180
            F  TTNG RIKSWS+S+SSMV+K+TFVNLQMNNVKN IIIDQ+YCP +  P+       
Sbjct: 223 TFVGTTNGARIKSWSSSYSSMVSKVTFVNLQMNNVKNPIIIDQSYCPDSCGPN------- 282

Query: 181 MISRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCF 240
            +S+SKVQI DVRYEGI G+SNT+VAVDF+CSQV PCQ I L+DINL F G  Q+TS C 
Sbjct: 283 EMSKSKVQIEDVRYEGIRGSSNTQVAVDFECSQVLPCQGIVLQDINLTFNGGGQSTSICH 342

Query: 241 NVRGSAFGLQLPPSCI 257
           NV+GSAFG QLPPSC+
Sbjct: 343 NVKGSAFGQQLPPSCL 351

[Close]

BLAST of Tan0013884 vs. ExPASy TrEMBL
Match: A0A5D3B9J1 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001860 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 2.0e-93
Identity = 173/254 (68.11%), Postives = 208/254 (81.89%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           S +   I NA I NIKS NSK FHF+V   +DVTFD++T+IAP +SPNTDGIH+S+SS I
Sbjct: 111 SMKLTGINNARISNIKSYNSKLFHFAVHGCRDVTFDHVTVIAPANSPNTDGIHVSLSSGI 170

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
           +IM+S I TGDDCISLGPGSK INIT +QCGPGHGISIGSLG+YPNEEDV  +TV+DS F
Sbjct: 171 NIMHSTIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF 230

Query: 123 SNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMI 182
             TTNG RIK+WS+S+S+MV+KITF+NLQMNNVKN IIIDQ+YCPH+  P+        +
Sbjct: 231 LGTTNGARIKTWSSSYSNMVSKITFLNLQMNNVKNPIIIDQSYCPHSCGPN-------EM 290

Query: 183 SRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFNV 242
           S+SKVQI+DVRYEGI G+SNT+VAVDF+CSQV PCQ I L+DINL F G  + T++C NV
Sbjct: 291 SQSKVQIKDVRYEGIRGSSNTQVAVDFECSQVFPCQGIVLQDINLPFNGGGRTTANCHNV 350

Query: 243 RGSAFGLQLPPSCI 257
           RGSAFG QLPPSC+
Sbjct: 351 RGSAFGHQLPPSCL 357

[Close]

BLAST of Tan0013884 vs. ExPASy TrEMBL
Match: A0A1S4DX91 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491147 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.6e-93
Identity = 172/254 (67.72%), Postives = 208/254 (81.89%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           S +   I NA I NIKS NSK FHF+V   +DVTFD++T+IAP +SPNTDGIH+S+SS I
Sbjct: 111 SMKLTGINNARISNIKSYNSKLFHFAVHGCRDVTFDHVTVIAPANSPNTDGIHVSLSSGI 170

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
           +IM+S I TGDDCISLGPGSK INIT +QCGPGHGISIGSLG+YPNEEDV  +TV+DS F
Sbjct: 171 NIMHSTIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTF 230

Query: 123 SNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMI 182
             TTNG RIK+WS+S+S+MV+K+TF+NLQMNNVKN IIIDQ+YCPH+  P+        +
Sbjct: 231 LGTTNGARIKTWSSSYSNMVSKVTFLNLQMNNVKNPIIIDQSYCPHSCGPN-------EM 290

Query: 183 SRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFNV 242
           S+SKVQI+DVRYEGI G+SNT+VAVDF+CSQV PCQ I L+DINL F G  + T++C NV
Sbjct: 291 SQSKVQIKDVRYEGIRGSSNTQVAVDFECSQVFPCQGIVLQDINLPFNGGGRTTANCHNV 350

Query: 243 RGSAFGLQLPPSCI 257
           RGSAFG QLPPSC+
Sbjct: 351 RGSAFGHQLPPSCL 357

[Close]

BLAST of Tan0013884 vs. ExPASy TrEMBL
Match: A0A0A0L660 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063620 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 6.7e-89
Identity = 164/252 (65.08%), Postives = 201/252 (79.76%), Query Frame = 0


Query: 5   RFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKISI 64
           +FN +  A+IKNI S +SK FHF+V  S+DVTFDN+T++AP +SPNTDGIHIS SS I+I
Sbjct: 2   KFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGINI 61

Query: 65  MNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIFSN 124
           M+S I TGDDCISLGPGSK INI+ + CGPGHGISIGSLG+ PNEEDV  +TV+DS F  
Sbjct: 62  MHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFIG 121

Query: 125 TTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMISR 184
           T+NG RIKSWS+ +SSMV+K+TF+NLQMNNVKN IIIDQ+YCP +  P+        +++
Sbjct: 122 TSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPN-------KMNK 181

Query: 185 SKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFNVRG 244
           S VQI+DVRY+GI G+SNT VAVDF+CSQV PCQ I L+DINL F G  + TS C NV+G
Sbjct: 182 SMVQIKDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKG 241

Query: 245 SAFGLQLPPSCI 257
           SA G QLPPSC+
Sbjct: 242 SASGQQLPPSCL 246

[Close]

BLAST of Tan0013884 vs. TAIR 10
Match: AT4G18180.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 231.1 bits (588), Expect = 1.0e-60
Identity = 121/266 (45.49%), Postives = 167/266 (62.78%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           S +F  +    ++ I S+NSK FH ++ + +D     + I AP DSPNTDGIHI  SS +
Sbjct: 156 SLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNV 215

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
               S IATGDDC+S+G G+  I IT I+CGPGHGIS+GSLG+YPNE+DV G+ VKD   
Sbjct: 216 YFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKI 275

Query: 123 SNTTNGVRIKSWSTSFS-SMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQM 182
           S TTNG+RIK+W+ S   S    +TF N+ MNNV N IIIDQ+YCP +SC  +S+     
Sbjct: 276 SGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSC--ISN----- 335

Query: 183 ISRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFG----------- 242
              SKV++ ++ ++ I GTS++ VAV   CS+  PC+ + L +++L              
Sbjct: 336 -VPSKVELSEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSSN 395

Query: 243 -GNDQATSSCFNVRGSAFGLQLPPSC 256
            GN+  +SSC NVR +  G Q+PP C
Sbjct: 396 RGNEAVSSSCRNVRANYIGTQIPPPC 413

[Close]

BLAST of Tan0013884 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 225.3 bits (573), Expect = 5.5e-59
Identity = 113/255 (44.31%), Postives = 164/255 (64.31%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           S RF+ + NA I++I SI++K+FH +V  ++++TFDN+ +IAP +SPNTDGIH+  S  +
Sbjct: 141 SIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGV 200

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
            I+NS IATGDDCIS+G G K +++  + CGPGHGIS+GSLG+Y +E+DV GITV +   
Sbjct: 201 KILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTL 260

Query: 123 SNTTNGVRIKSW-STSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQM 182
             T NG+RIK+W S + ++  + I F N+ +NNV N I+IDQ YCP N C       +++
Sbjct: 261 QGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKL 320

Query: 183 ISRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGND-QATSSCF 242
           +        D+ ++ I GTS  K AV   CS+  PC ++ + +INL + G D   T  C 
Sbjct: 321 V--------DISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCS 380

Query: 243 NVRGSAFGLQLPPSC 256
           NV     G Q P +C
Sbjct: 381 NVSPKLVGTQNPKAC 387

[Close]

BLAST of Tan0013884 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 222.2 bits (565), Expect = 4.6e-58
Identity = 114/255 (44.71%), Postives = 165/255 (64.71%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           S RF+ +TNA I++I SI++K+FH +V  ++++TFDN+ I+AP +SPNTDGIH+  S  +
Sbjct: 141 SIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGV 200

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
           SI+NS I+TGDDC+S+G G   + +  + CGPGHGIS+GSLG+Y +E+DV GI V +   
Sbjct: 201 SIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTL 260

Query: 123 SNTTNGVRIKSW-STSFSSMVNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQM 182
             T NG+RIK+W S + S+  + I F N+ + NV N I+IDQ YCP N C    S     
Sbjct: 261 QETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKS----- 320

Query: 183 ISRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGND-QATSSCF 242
              S +++ ++ +  I GTS  K AV   CS+  PC+++ + DIN+ + G D  AT  C 
Sbjct: 321 ---SSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCS 380

Query: 243 NVRGSAFGLQLPPSC 256
           NVR    G Q P +C
Sbjct: 381 NVRPKLVGTQFPKAC 387

[Close]

BLAST of Tan0013884 vs. TAIR 10
Match: AT1G65570.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 219.9 bits (559), Expect = 2.3e-57
Identity = 113/255 (44.31%), Postives = 160/255 (62.75%), Query Frame = 0


Query: 3   SFRFNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKI 62
           + RF    N  IK + S+NS+ FH ++ + +++  +++ IIAP++SPNTDGIHI +S+ I
Sbjct: 153 TLRFMDSNNVKIKGVLSLNSQLFHIAINRCRNIKIEDVRIIAPDESPNTDGIHIQLSTDI 212

Query: 63  SIMNSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIF 122
            + N+ I TGDDCIS+GPG+K + +  I CGPGHGISIGSL +   E+ V  +TVK+++F
Sbjct: 213 EVRNASIKTGDDCISIGPGTKNLMVDGITCGPGHGISIGSLAKSIEEQGVENVTVKNAVF 272

Query: 123 SNTTNGVRIKSWSTSFSSMVNKITFVNLQMNNVKNSIIIDQNYCP-HNSCPHVSSDEVQM 182
             T NG+RIKSW    +  V ++ F+   M NV   I+IDQNYCP  +SCP         
Sbjct: 273 VRTDNGLRIKSWPRHSNGFVERVRFLGAIMVNVSYPILIDQNYCPGDSSCPS-------- 332

Query: 183 ISRSKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGNDQATSSCFN 242
              S ++I DV Y GI GTS T++A+  DCS+  PC  I ++ INL   G + A +SC N
Sbjct: 333 -QESGIKINDVIYSGIMGTSATEIAIKMDCSEKVPCTGIRMQAINLTSYG-EAAKTSCTN 392

Query: 243 VRGSAFGLQLPPSCI 257
           V G   GL  P  C+
Sbjct: 393 VSGKQLGLVTPSGCL 397

[Close]

BLAST of Tan0013884 vs. TAIR 10
Match: AT1G17150.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 219.9 bits (559), Expect = 2.3e-57
Identity = 115/253 (45.45%), Postives = 168/253 (66.40%), Query Frame = 0


Query: 6   FNAITNATIKNIKSINSKSFHFSVFKSQDVTFDNITIIAPEDSPNTDGIHISMSSKISIM 65
           F+ + N+++  I S+NSK+ HF+       +   + IIAP +SPNTDGI I++SS + I 
Sbjct: 157 FDFVKNSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIALSSNMQIS 216

Query: 66  NSMIATGDDCISLGPGSKAINITKIQCGPGHGISIGSLGQYPNEEDVVGITVKDSIFSNT 125
           N+ I+TGDDCI++  G+   +I  ++CGPGHGISIGSLG+  +E++V G+ V++S+F+ T
Sbjct: 217 NTHISTGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMVRNSVFTGT 276

Query: 126 TNGVRIKSWSTSFSSM-VNKITFVNLQMNNVKNSIIIDQNYCPHNSCPHVSSDEVQMISR 185
           TNG+RIK+W +S S++ +  + + NLQM NV+N I IDQ YCP+  C ++          
Sbjct: 277 TNGIRIKTWESSASTIRIINLVYENLQMINVENPIGIDQKYCPYPPCSNMGD-------- 336

Query: 186 SKVQIRDVRYEGINGTSNTKVAVDFDCSQVAPCQDIALRDINLVFGGND-QATSSCFNVR 245
           S +QIR+V  + I GTS  KVAV F CS+  PC+D+ L DINL   G D  A++ C NV 
Sbjct: 337 SHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHGVDGPASALCENVD 396

Query: 246 GSAFGLQLPPSCI 257
           GSA G  +PP C+
Sbjct: 397 GSATGKMVPPHCL 401

The following BLAST results are available for this feature:

BLAST of Tan0013884 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6H9K0	4.4e-61	45.82	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
Q05967	1.1e-56	45.02	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
Q39766	1.5e-56	44.27	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
P35337	1.9e-56	44.14	Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1	[more]
Q39786	3.2e-56	44.27	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]

BLAST of Tan0013884 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031738767.1	1.4e-93	69.69	exopolygalacturonase [Cucumis sativus]	[more]
KAA0065794.1	4.2e-93	67.97	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYJ96533.1 exopolygalactur...	[more]
KAA0065793.1	4.2e-93	68.11	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYJ96532.1 exopolygalactur...	[more]
XP_016900599.1	5.4e-93	67.72	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
XP_038904215.1	7.9e-92	68.50	exopolygalacturonase-like [Benincasa hispida]	[more]

BLAST of Tan0013884 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7H9	6.9e-94	69.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063610 PE=3 SV=1	[more]
A0A5D3BB58	2.0e-93	67.97	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3B9J1	2.0e-93	68.11	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S4DX91	2.6e-93	67.72	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491147 PE=3 SV=1	[more]
A0A0A0L660	6.7e-89	65.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063620 PE=3 SV=1	[more]

BLAST of Tan0013884 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18180.1	1.0e-60	45.49	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	5.5e-59	44.31	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	4.6e-58	44.71	Pectin lyase-like superfamily protein	[more]
AT1G65570.1	2.3e-57	44.31	Pectin lyase-like superfamily protein	[more]
AT1G17150.1	2.3e-57	45.45	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 32..58 e-value: 110.0 score: 11.6 coord: 59..80 e-value: 7900.0 score: 0.8 coord: 112..133 e-value: 7.1 score: 15.6 coord: 217..244 e-value: 7700.0 score: 0.9 coord: 142..163 e-value: 8900.0 score: 0.4
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 3..243 e-value: 8.7E-73 score: 245.2
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 89..102
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..253 e-value: 1.1E-75 score: 257.2
None	No IPR available	PANTHER	PTHR31375:SF246	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 4..255
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 4..255
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 4..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013884.1	Tan0013884.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity