Tan0013805 (gene) Snake gourd v1

Overview


Name	Tan0013805
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RNase H domain-containing protein
Location	LG06: 23097085 .. 23097841 (+)
RNA-Seq Expression	Tan0013805
Synteny	Tan0013805

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTGTAAACCTATTGTTTTGAATGAAAATCTGAAGGGTAACTATGTTAGTTATCTTCTTAATGACCAAGGTAGTTGGAATGAAAACTTGGTCAAAGAAGTCTTTCTCCCTAGTGAGGCTGCTGAAATTCTTGAAATGTCTATGAAAGAACGGAGAGCCACGCGAGTCAAGATTCTTGGATTCCTCCACCAAACACCTTCTGGAAGCTTAATTCTGACGCTTCTTGGAAGGCTGATAAGAAAATTGGAGGCCTCGACTGGATAGTTCGTGACTCCAGAGGATCTCCGATCTGTGTCGGTCACAAATCAATTGACAAAAACGAAAACATTAAAATGTTAGAATCAACAGCTATCGTTGAAGGCATGCAAAATCTCATTAAACTGAACCAAGCTTGTGAGAATTTGGTCATTGAAACTGATTCAATTGAAGTTTACAACCTTCTGGTTAGGGATAGCGAGGACCTTACAGAGGTTAACCTCCTCATTGATGAAATTAAACAGTTGAGCAAGAATTTTAAGGAGATTACCTTCTCTAAGTGTCCCAGGAATGGCAACAAGGTAGCCCATCATCTTGCTCGTGCGAGAAGGCCTGGAGGGGAGTCTCCTTCTTCTTCATCGATGTGCTTCTGTTTTGGGGATTTTCGTTTTTTCGATTCTGCATGTTCGAATGTTTTGGAGGAACGTTTTGTTCCCTTTTGGATCTCCTCTGCTTTAAATGAGGAAGTGGGTGTAACTTCTTTGGTTAGTTTTTAA

mRNA sequence

ATGGCAACTGTAAACCTATTAACGGAGAGCCACGCGAGTCAAGATTCTTGGATTCCTCCACCAAACACCTTCTGGAAGCTTAATTCTGACGCTTCTTGGAAGGCTGATAAGAAAATTGGAGGCCTCGACTGGATAGTTCGTGACTCCAGAGGATCTCCGATCTGTGTCGGTCACAAATCAATTGACAAAAACGAAAACATTAAAATGTTAGAATCAACAGCTATCGTTGAAGGCATGCAAAATCTCATTAAACTGAACCAAGCTTGTGAGAATTTGGTCATTGAAACTGATTCAATTGAAGTTTACAACCTTCTGGTTAGGGATAGCGAGGACCTTACAGAGGTTAACCTCCTCATTGATGAAATTAAACAGTTGAGCAAGAATTTTAAGGAGATTACCTTCTCTAAGTGTCCCAGGAATGGCAACAAGGTAGCCCATCATCTTGCTCGTGCGAGAAGGCCTGGAGGGGAGTCTCCTTCTTCTTCATCGATGTGCTTCTGTTTTGGGGATTTTCGTTTTTTCGATTCTGCATGTTCGAATGTTTTGGAGGAACGTTTTGTTCCCTTTTGGATCTCCTCTGCTTTAAATGAGGAAGTGGGTGTAACTTCTTTGGTTAGTTTTTAA

Coding sequence (CDS)

ATGGCAACTGTAAACCTATTAACGGAGAGCCACGCGAGTCAAGATTCTTGGATTCCTCCACCAAACACCTTCTGGAAGCTTAATTCTGACGCTTCTTGGAAGGCTGATAAGAAAATTGGAGGCCTCGACTGGATAGTTCGTGACTCCAGAGGATCTCCGATCTGTGTCGGTCACAAATCAATTGACAAAAACGAAAACATTAAAATGTTAGAATCAACAGCTATCGTTGAAGGCATGCAAAATCTCATTAAACTGAACCAAGCTTGTGAGAATTTGGTCATTGAAACTGATTCAATTGAAGTTTACAACCTTCTGGTTAGGGATAGCGAGGACCTTACAGAGGTTAACCTCCTCATTGATGAAATTAAACAGTTGAGCAAGAATTTTAAGGAGATTACCTTCTCTAAGTGTCCCAGGAATGGCAACAAGGTAGCCCATCATCTTGCTCGTGCGAGAAGGCCTGGAGGGGAGTCTCCTTCTTCTTCATCGATGTGCTTCTGTTTTGGGGATTTTCGTTTTTTCGATTCTGCATGTTCGAATGTTTTGGAGGAACGTTTTGTTCCCTTTTGGATCTCCTCTGCTTTAAATGAGGAAGTGGGTGTAACTTCTTTGGTTAGTTTTTAA

Protein sequence

MATVNLLTESHASQDSWIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKMLESTAIVEGMQNLIKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNFKEITFSKCPRNGNKVAHHLARARRPGGESPSSSSMCFCFGDFRFFDSACSNVLEERFVPFWISSALNEEVGVTSLVSF

Homology

[Close]

BLAST of Tan0013805 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 105.5 bits (262), Expect = 5.5e-19
Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 0


Query: 3   TVNLLTESHASQDSWIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSID 62
           ++++L ++  ++  W PPP   W LN+DASW      GG+ WI+R   G  +  G++ ++
Sbjct: 57  SLSMLHKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVE 116

Query: 63  KNENIKMLESTAIVEGMQNLIKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEI 122
              N+K+LE++AI+EG++NL  L      L IETDS EV +LL R  EDLT+   +++EI
Sbjct: 117 ACNNVKLLEASAILEGLRNLTNLG-VLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEI 176

Query: 123 KQLSKNFKEITFSKCPRNGNKVAHHLAR 151
             L  + + + F+K  R  N  AH LA+
Sbjct: 177 LNLRDSCEILAFAKVGRETNGCAHSLAQ 203

[Close]

BLAST of Tan0013805 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-18
Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 0


Query: 17  WIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKMLESTAIV 76
           W PP +  WKLN++A+W+AD   GG+ WI+RD +G  I    + I    NI  LE  AI 
Sbjct: 79  WKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAIC 138

Query: 77  EGMQNLIKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNFKEITFSK 136
           EG++ +    + C  + +E+DS+E  +LL R  +D TE+  L++EI Q+ K+ + ++   
Sbjct: 139 EGLRAI--RQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRH 198

Query: 137 CPRNGNKVAHHLAR 151
             R  NKVAH LAR
Sbjct: 199 ISREANKVAHGLAR 210

[Close]

BLAST of Tan0013805 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-18
Identity = 54/140 (38.57%), Postives = 81/140 (57.86%), Query Frame = 0


Query: 17  WIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKMLESTAIV 76
           W PP +  WKLN+DA+W+AD   GG+ WI+RD +G  I    + I    NI  LE  AI 
Sbjct: 79  WKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYLEVMAIC 138

Query: 77  EGMQNLIK------LNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNFK 136
           EG++ + +        + C  + +E+DS+E  +LL R  +D TE+  L++EI Q+ ++ K
Sbjct: 139 EGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMEDMK 198

Query: 137 EITFSKCPRNGNKVAHHLAR 151
            ++     R  NKVAH LAR
Sbjct: 199 IVSMRHISREANKVAHDLAR 218

[Close]

BLAST of Tan0013805 vs. NCBI nr
Match: XP_015381032.1 (uncharacterized protein LOC107174551 [Citrus sinensis])

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-13
Identity = 50/137 (36.50%), Postives = 78/137 (56.93%), Query Frame = 0


Query: 14  QDSWIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKMLEST 73
           Q  W PPPN + K+N DA+   + ++ GL  +VRDS G+      KS+    ++ M E+T
Sbjct: 113 QKQWSPPPNGWQKVNVDAAVDVENQMAGLGVVVRDSDGNCRAAAIKSLRLPGSVAMAEAT 172

Query: 74  AIVEGMQNLIKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNFKEIT 133
           A+  G+Q   K N      + E+DS+EV +L+ + S  LTE+  LI +I++  +NF+   
Sbjct: 173 AMEWGLQVAEKANITFR--IFESDSLEVIDLINKKSSSLTEIGWLISDIQENLQNFQNFK 232

Query: 134 FSKCPRNGNKVAHHLAR 151
              CPR+ N  AH LA+
Sbjct: 233 AQHCPRDCNYAAHSLAK 247

[Close]

BLAST of Tan0013805 vs. NCBI nr
Match: XP_024041966.1 (uncharacterized protein LOC112099096 [Citrus clementina])

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-13
Identity = 50/137 (36.50%), Postives = 78/137 (56.93%), Query Frame = 0


Query: 14  QDSWIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKMLEST 73
           Q  W PPPN + K+N DA+   + ++ GL  +VRDS G+      KS+    ++ M E+T
Sbjct: 100 QKQWSPPPNGWQKVNVDAAVDVENQMAGLGVVVRDSDGNCRAAAIKSLRLPGSVAMAEAT 159

Query: 74  AIVEGMQNLIKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNFKEIT 133
           A+  G+Q   K N      + E+DS+EV +L+ + S  LTE+  LI +I++  +NF+   
Sbjct: 160 AMEWGLQVAEKANITFR--IFESDSLEVIDLINKKSSSLTEIGWLISDIQENLQNFQNFK 219

Query: 134 FSKCPRNGNKVAHHLAR 151
              CPR+ N  AH LA+
Sbjct: 220 AQHCPRDCNYAAHSLAK 234

[Close]

BLAST of Tan0013805 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.7e-19
Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 0


Query: 3   TVNLLTESHASQDSWIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSID 62
           ++++L ++  ++  W PPP   W LN+DASW      GG+ WI+R   G  +  G++ ++
Sbjct: 57  SLSMLHKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVE 116

Query: 63  KNENIKMLESTAIVEGMQNLIKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEI 122
              N+K+LE++AI+EG++NL  L      L IETDS EV +LL R  EDLT+   +++EI
Sbjct: 117 ACNNVKLLEASAILEGLRNLTNLG-VLRPLHIETDSAEVESLLNRKREDLTKTGWVVEEI 176

Query: 123 KQLSKNFKEITFSKCPRNGNKVAHHLAR 151
             L  + + + F+K  R  N  AH LA+
Sbjct: 177 LNLRDSCEILAFAKVGRETNGCAHSLAQ 203

[Close]

BLAST of Tan0013805 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-18
Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 0


Query: 17  WIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKMLESTAIV 76
           W PP +  WKLN++A+W+AD   GG+ WI+RD +G  I    + I    NI  LE  AI 
Sbjct: 79  WKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVMAIC 138

Query: 77  EGMQNLIKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNFKEITFSK 136
           EG++ +    + C  + +E+DS+E  +LL R  +D TE+  L++EI Q+ K+ + ++   
Sbjct: 139 EGLRAI--RQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEIVSMRH 198

Query: 137 CPRNGNKVAHHLAR 151
             R  NKVAH LAR
Sbjct: 199 ISREANKVAHGLAR 210

[Close]

BLAST of Tan0013805 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.3e-18
Identity = 54/140 (38.57%), Postives = 81/140 (57.86%), Query Frame = 0


Query: 17  WIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKMLESTAIV 76
           W PP +  WKLN+DA+W+AD   GG+ WI+RD +G  I    + I    NI  LE  AI 
Sbjct: 79  WKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYLEVMAIC 138

Query: 77  EGMQNLIK------LNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNFK 136
           EG++ + +        + C  + +E+DS+E  +LL R  +D TE+  L++EI Q+ ++ K
Sbjct: 139 EGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMEDMK 198

Query: 137 EITFSKCPRNGNKVAHHLAR 151
            ++     R  NKVAH LAR
Sbjct: 199 IVSMRHISREANKVAHDLAR 218

[Close]

BLAST of Tan0013805 vs. ExPASy TrEMBL
Match: A0A6J1CIF1 (uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011237 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-12
Identity = 45/134 (33.58%), Postives = 74/134 (55.22%), Query Frame = 0


Query: 17  WIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKMLESTAIV 76
           W+PP    +K+N+DAS+ A  +  GL  I+R+ RG  +    K ++  +++ M E+   V
Sbjct: 34  WLPPDKRIYKINTDASFLASDQHAGLGIIIRNDRGQVMASATKYLENIQSVDMAEAIVAV 93

Query: 77  EGMQNLIKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNFKEITFSK 136
           EG+Q   K+      +++ETDS  ++NL  + SEDL+E   ++ + K         +F+ 
Sbjct: 94  EGLQLASKI--GVNPVILETDSSRIFNLFSQPSEDLSETGEIVLKAKNFWTQSLHASFNF 153

Query: 137 CPRNGNKVAHHLAR 151
             R GNK AH LAR
Sbjct: 154 VKREGNKAAHMLAR 165

[Close]

BLAST of Tan0013805 vs. ExPASy TrEMBL
Match: A0A7N2MU32 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-12
Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 0


Query: 10  SHASQDSWIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKM 69
           +H +Q  W PPP    K+N D +  + +K  G+  +VRD  G  +    K I  ++++K 
Sbjct: 599 THTAQSHWRPPPREVVKVNFDGATCSQEKTSGVGVVVRDMNGLVLASCAKRI--HQSVKA 658

Query: 70  LESTAIVEGMQNLIKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNF 129
           +E  A+          +   + L++E DS+EV   L+  +E LT   LL+++++ LS+NF
Sbjct: 659 MEIEAMAAATALTFAKDLGFQRLILEGDSLEVIQALLERTETLTPTGLLLEDVRSLSQNF 718

Query: 130 KEITFSKCPRNGNKVAHHLAR 151
             + +S   R+GN VAH LA+
Sbjct: 719 DLLLYSHTKRDGNAVAHSLAK 737

[Close]

BLAST of Tan0013805 vs. TAIR 10
Match: AT2G13980.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07
Identity = 40/134 (29.85%), Postives = 60/134 (44.78%), Query Frame = 0


Query: 17  WIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKMLESTAIV 76
           W  PP+T  K N DA +          WI+R+  G     G   +D        E+ A++
Sbjct: 13  WKAPPDTHIKCNYDAGFNVQNLDSTARWIIRNHDGIAQHWGSLQLDNTSTPLEAETKALL 72

Query: 77  EGMQNLIKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNFKEITFSK 136
             +Q      +    +++E D   + NL+   S      NLL D+I+  +K F  + FS 
Sbjct: 73  AALQQ--TWIRGYLRVIMEGDCETLTNLVSGSSSHNHLANLL-DDIRIWAKKFSNVQFSF 132

Query: 137 CPRNGNKVAHHLAR 151
             R GNKVAH LA+
Sbjct: 133 VRRGGNKVAHELAK 143

[Close]

BLAST of Tan0013805 vs. TAIR 10
Match: AT3G23320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07
Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = 0


Query: 15  DSWIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKMLESTA 74
           D W  P   + K N D S  A ++  GL WI+R+S+G+ +  G       + IK  E TA
Sbjct: 28  DKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQGRQTIKEAECTA 87

Query: 75  IVEGMQNLIKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNFKEITF 134
           ++  +Q    L      +  E D+I V N L+R+ E    +   ++ I+Q SK F  + F
Sbjct: 88  LIWAIQCAWDLGY--RRVEFEGDNITV-NRLIRNKETNPRLRYYLEFIQQWSKAFTTVKF 147

Query: 135 SKCPRNGNKVAHHLAR 151
           +   R  N     LA+
Sbjct: 148 TFRHREQNVCVDVLAK 160

[Close]

BLAST of Tan0013805 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 8.8e-07
Identity = 38/141 (26.95%), Postives = 58/141 (41.13%), Query Frame = 0


Query: 17  WIPPPNTFWKLNSDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIKMLESTAIV 76
           W  PP T+ K N DA +   K      WI+R+  G+PI  G   +    N    E+ A++
Sbjct: 326 WRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALL 385

Query: 77  EGMQNL-------IKLNQACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNF 136
             +Q         + +   C+ L+   + I  ++ L    ED          I   +  F
Sbjct: 386 AALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSLANHLED----------ISFWANKF 445

Query: 137 KEITFSKCPRNGNKVAHHLAR 151
             I F    R GNK+AH LA+
Sbjct: 446 ASIQFGFIRRKGNKLAHVLAK 456

[Close]

BLAST of Tan0013805 vs. TAIR 10
Match: AT4G09490.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.8e-04
Identity = 34/124 (27.42%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 29  SDASWKADKKIGGLDWIVRDSRGSPICVGHKSIDKNENIK-MLESTAIVEGMQNLIKLNQ 88
           +DA+WK + K  G  W++R+       + ++S  +N  +  M E+ A+   +Q    +  
Sbjct: 35  TDAAWKHETKDVGFGWVIRNC-PELTALHYQSAARNVRLPLMAEAIALFLALQYAQSI-- 94

Query: 89  ACENLVIETDSIEVYNLLVRDSEDLTEVNLLIDEIKQLSKNFKEITFSKCPRNGNKVAHH 148
               L + +DS ++   +  +S   TE   +I +I  LS  F +++FS  PR+ N+VA  
Sbjct: 95  GITKLSMASDSQQLITAITSESPS-TEFYGIIFDILNLSLGFADVSFSFVPRSENRVADE 154

Query: 149 LARA 152
           LA++
Sbjct: 155 LAKS 154

The following BLAST results are available for this feature:

BLAST of Tan0013805 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0013805 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155262.1	5.5e-19	37.84	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
XP_022143535.1	2.7e-18	39.55	uncharacterized protein LOC111013412 [Momordica charantia]	[more]
XP_022156777.1	4.6e-18	38.57	uncharacterized protein LOC111023608 [Momordica charantia]	[more]
XP_015381032.1	1.2e-13	36.50	uncharacterized protein LOC107174551 [Citrus sinensis]	[more]
XP_024041966.1	1.2e-13	36.50	uncharacterized protein LOC112099096 [Citrus clementina]	[more]

BLAST of Tan0013805 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNV9	2.7e-19	37.84	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1CP26	1.3e-18	39.55	uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DSV1	2.3e-18	38.57	uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1CIF1	1.4e-12	33.58	uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A7N2MU32	2.4e-12	31.91	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Tan0013805 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G13980.1	1.8e-07	29.85	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G23320.1	3.0e-07	30.15	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G09510.1	8.8e-07	26.95	Ribonuclease H-like superfamily protein	[more]
AT4G09490.1	1.8e-04	27.42	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 28..150 e-value: 2.6E-23 score: 82.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 25..154 e-value: 3.7E-15 score: 58.0
None	No IPR available	PANTHER	PTHR33033	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 14..157
None	No IPR available	PANTHER	PTHR33033:SF67	SUBFAMILY NOT NAMED	coord: 14..157
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 27..150 e-value: 2.10885E-24 score: 91.2216
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 24..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013805.1	Tan0013805.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity