
Tan0013653 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGATAGATTACAGAGCATTTAATGTAAACATCACCTGCGCCGAAGGAATCGAAGGAGTTTTAAGTTTCGTCAATTTTTTCCATAGATTAAAGGTCTATGCGGTGGTTTCCGTCGCCGGAGCCTCGTCGGCCGACCAAGAAACACCGCTGGCAAAGTACTTCGGTAAAAATCCGGCATGGAATTTCCCAATGAAGTTTTATTTTCAGGAATCAAAACTGCAAGAAAATGTCCTAATTCTGAGAATTCTATTGAGGCGAAAGCAAATTTTTAGAAGAGATGAAGACATTGCGGAAGCTTTAATTCCATTGAAGAATCTTTTTGATGGCAATGAAAATGTGATGGATGAAAATTACAGATCATCGTGGTTGCTTTCACCGTCCGGCGGCCGCCGTGGGTTTGTGTATTTTTCTTACTACTTTAGCCTGACTTACCATCCCACCGCCGGAGCCAACGGTGGCGTTGTTGCTCCGCCGTCAGCTTGGGAATGTTGA ATGTCGATAGATTACAGAGCATTTAATGTAAACATCACCTGCGCCGAAGGAATCGAAGGAGTTTTAAGTTTCGTCAATTTTTTCCATAGATTAAAGGTCTATGCGGTGGTTTCCGTCGCCGGAGCCTCGTCGGCCGACCAAGAAACACCGCTGGCAAAGTACTTCGGTAAAAATCCGGCATGGAATTTCCCAATGAAGTTTTATTTTCAGGAATCAAAACTGCAAGAAAATGTCCTAATTCTGAGAATTCTATTGAGGCGAAAGCAAATTTTTAGAAGAGATGAAGACATTGCGGAAGCTTTAATTCCATTGAAGAATCTTTTTGATGGCAATGAAAATGTGATGGATGAAAATTACAGATCATCGTGGTTGCTTTCACCGTCCGGCGGCCGCCGTGGGTTTGTGTATTTTTCTTACTACTTTAGCCTGACTTACCATCCCACCGCCGGAGCCAACGGTGGCGTTGTTGCTCCGCCGTCAGCTTGGGAATGTTGA ATGTCGATAGATTACAGAGCATTTAATGTAAACATCACCTGCGCCGAAGGAATCGAAGGAGTTTTAAGTTTCGTCAATTTTTTCCATAGATTAAAGGTCTATGCGGTGGTTTCCGTCGCCGGAGCCTCGTCGGCCGACCAAGAAACACCGCTGGCAAAGTACTTCGGTAAAAATCCGGCATGGAATTTCCCAATGAAGTTTTATTTTCAGGAATCAAAACTGCAAGAAAATGTCCTAATTCTGAGAATTCTATTGAGGCGAAAGCAAATTTTTAGAAGAGATGAAGACATTGCGGAAGCTTTAATTCCATTGAAGAATCTTTTTGATGGCAATGAAAATGTGATGGATGAAAATTACAGATCATCGTGGTTGCTTTCACCGTCCGGCGGCCGCCGTGGGTTTGTGTATTTTTCTTACTACTTTAGCCTGACTTACCATCCCACCGCCGGAGCCAACGGTGGCGTTGTTGCTCCGCCGTCAGCTTGGGAATGTTGA MSIDYRAFNVNITCAEGIEGVLSFVNFFHRLKVYAVVSVAGASSADQETPLAKYFGKNPAWNFPMKFYFQESKLQENVLILRILLRRKQIFRRDEDIAEALIPLKNLFDGNENVMDENYRSSWLLSPSGGRRGFVYFSYYFSLTYHPTAGANGGVVAPPSAWEC Homology
BLAST of Tan0013653 vs. ExPASy Swiss-Prot
Match: O04133 (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.9e-10 Identity = 48/143 (33.57%), Postives = 70/143 (48.95%), Query Frame = 0
BLAST of Tan0013653 vs. NCBI nr
Match: XP_022938307.1 (protein SRC2 [Cucurbita moschata] >KAG7021095.1 Protein SRC2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 255.4 bits (651), Expect = 3.4e-64 Identity = 124/163 (76.07%), Postives = 139/163 (85.28%), Query Frame = 0
BLAST of Tan0013653 vs. NCBI nr
Match: KAG6586252.1 (Protein SRC2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 254.6 bits (649), Expect = 5.8e-64 Identity = 124/163 (76.07%), Postives = 138/163 (84.66%), Query Frame = 0
BLAST of Tan0013653 vs. NCBI nr
Match: XP_031736682.1 (protein SRC2 homolog [Cucumis sativus] >KGN60949.1 hypothetical protein Csa_021167 [Cucumis sativus]) HSP 1 Score: 204.5 bits (519), Expect = 6.9e-49 Identity = 107/165 (64.85%), Postives = 127/165 (76.97%), Query Frame = 0
BLAST of Tan0013653 vs. NCBI nr
Match: XP_022150754.1 (protein SRC2 [Momordica charantia]) HSP 1 Score: 189.1 bits (479), Expect = 3.0e-44 Identity = 100/163 (61.35%), Postives = 116/163 (71.17%), Query Frame = 0
BLAST of Tan0013653 vs. NCBI nr
Match: XP_015875009.1 (protein SRC2 homolog [Ziziphus jujuba]) HSP 1 Score: 109.4 bits (272), Expect = 3.0e-20 Identity = 57/140 (40.71%), Postives = 89/140 (63.57%), Query Frame = 0
BLAST of Tan0013653 vs. ExPASy TrEMBL
Match: A0A6J1FDP3 (protein SRC2 OS=Cucurbita moschata OX=3662 GN=LOC111444443 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64 Identity = 124/163 (76.07%), Postives = 139/163 (85.28%), Query Frame = 0
BLAST of Tan0013653 vs. ExPASy TrEMBL
Match: A0A0A0LIU2 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G030590 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 3.3e-49 Identity = 107/165 (64.85%), Postives = 127/165 (76.97%), Query Frame = 0
BLAST of Tan0013653 vs. ExPASy TrEMBL
Match: A0A6J1DB07 (protein SRC2 OS=Momordica charantia OX=3673 GN=LOC111018814 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.4e-44 Identity = 100/163 (61.35%), Postives = 116/163 (71.17%), Query Frame = 0
BLAST of Tan0013653 vs. ExPASy TrEMBL
Match: A0A6P3ZA45 (protein SRC2 homolog OS=Ziziphus jujuba OX=326968 GN=LOC107411858 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.5e-20 Identity = 57/140 (40.71%), Postives = 89/140 (63.57%), Query Frame = 0
BLAST of Tan0013653 vs. ExPASy TrEMBL
Match: A0A5N6QV91 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_006616 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 2.5e-20 Identity = 62/160 (38.75%), Postives = 93/160 (58.13%), Query Frame = 0
BLAST of Tan0013653 vs. TAIR 10
Match: AT3G05440.1 (C2 domain-containing protein ) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07 Identity = 30/99 (30.30%), Postives = 49/99 (49.49%), Query Frame = 0
BLAST of Tan0013653 vs. TAIR 10
Match: AT4G15740.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 45.8 bits (107), Expect = 3.8e-05 Identity = 37/126 (29.37%), Postives = 58/126 (46.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|