Tan0013534 (gene) Snake gourd v1

Overview


Name	Tan0013534
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	rRNA-processing protein UTP23 homolog
Location	LG11: 14149545 .. 14160025 (+)
RNA-Seq Expression	Tan0013534
Synteny	Tan0013534

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTGCATAAACGGCTTTTTCAGGTATAAGGTTTTAGGTTTCACAGTCTCACTCTCCTTTCTCAGTTTTTATTTCTCTCCGCCGTCGACGGTCGCCGGTGACTCCCCACCACCAATTTGCTCTTCTTCTTTATCTGCTGCAACCGAAGTCTGCTCTGACCGGTCACGCAGTCGGAAAATACCCCCCACCGAAACACGGGAACAAGGTATTTTTCCATTAAATCTCTCCCTTCCTAATCTACGAATTTTGATTTCAAGCATGATTTTGAGTTAAAAGAGTTAAATCACAGATAGTTACAATCAATTTCTTATACCATGAGTTTTCTTGGTCTTAGTGATAAATGATTCAGTACCCTTCGCGTCTTCTTTCAAATTGGAACTTATTTTACTTTTTTTTGGTTATCTGTTTAGATGGGATTGAAAAAACAAAAGCGTCAACGGAAAACTGTGGGATTTTACACTACATGTTTTGGATTCAGGGAGCCGTTTAAAGTCTTTTGTGATGGAACTTTCGTTTATCATCTTCTCTCCAATCAGCTATTGCCGGCCGATGATGCCATTGCTAAAGTTCTTGGTGGCCGAGTCAAGCTTTTCACCACCAGGTTTGTTCTTTTTATTGAGTAATCATACCCCGCCCATTTAGCCTGTTATTTTTCATTATCTCATTGGTTTGCAGATGTATACTCTTAGAGTTGAAGGCCCGTGGCCGACCCCTCTCTAACGTTTTAGAGGCATCCAGTAAGCTGTTTATTGCAAGGTCAGCCACGGATTCATCTTATTTACATTCTTCATTTGAATTTTTGGTGACTGATTCTTGATTTTGTCATGTTCTTGTGGTATTATCGAGCTATTTGAATTGTTCAATTCCATCTTTTCTGAGTTCAAATTACATTTTGGTGTTAGATGTAACCATGAGAGAAGAGTGCATGGTGTGACATGCATCATGGATGTGATTGGTAAATCGAACGCTGAACATTTTTTTGTTGGCACTCAAGATGCTGATCTTAAGAAGCAGCTTCGAGAGGTTAGTTTATTTTATGAATTGCCCCAAAATTATTAATTTTCCAGTACATCTATACTCTTTCTGTTTGCTTCAAATCTGATTATTTACTAGCCTTTTCAAACTTTCTAATTTATGAATTGTTTCTAATTTCTGCTTTTTAAAAATATCCACTGGATTGGAAGCTCTCTTGAAATTCTACTTATGTATATTTGAATTGGAAGGTTATCTCTTTGGTTGACAAGGACAATTTAGACTCTCCCTTTACTCTAGAAGGGATTAGGAAAGAGGTGTTCGAGTGCGACGAGAATGAGGTGCCCGGTCCTGATGAGTTCTCTTTAGCCTTTTTCCAATCTAACTGGGATGGGATTAAGGAAGACTTGTGGAAAGTTTTTCTGGAGTTTTATGAGAGAGGCATCTTGACAAATTGTTGGGTGAAACCTTCGTCTGTCTTGTTCCTAAGAAGGATAAGGTTACAAGAGTAAAGGACCTCAAACCTATTAATCTAGTGACTAGTGTTTATAAGATCATTGCTAAGGTTCTAGCTAGGTTGAGAAAGATTCTCCCCCCTTGACGATCTCTGAATTGCAAGGGGCCTTTGTTGAAAATCGCCAGATTTTGGACCAGACCCTGATAGCTAATGAGGTTATAGAGGAATATAGGTTGTCGAAGGAGGGGTTCTTTTTAAGATTAATTTTGAGAAGGCCTATGACCATGTGGATTAGGACTCCTTGGACAAGGTTCTAGCCAAAAAGGGTTTTGGATACAAATGGAGGTCTTGGATGTGGAGTTGTGTTCGGACTATTCAGTTTTCCATCTTGGTCAATGGCAAGCCTAGGGGGAAGATTCAAGCTTCTAGGGGTCTAAGGTAGGGCGACCCCTTATCCCCTTTTCTCTTCTTGGTGGTGGTGGACACCTTGAACAAATTAGTGTCTGAAGGGGTGGAGGCCAATATTATCCAAGGTTTTCAGGTCGGGAGAGATCGGGGTTTCCTTTCTCATCTTCAGTTTGCGATGACACTCTGTTCTTTTGTTATGCTAGGGAGGATTCCTTTTTGAATCTGAATTAGTTTCTTTGGTTCTTTGAGGCTATGTCGGGGCTTTGTATTAATAAGGGGAAGTGTTAGATTTTGGGAATCAATAGTTATTCGGAGAAGTTGGCTAAATGGGCTTCGATAGCCGGGTGTGAGGTTGGGAGCTTTCCTTCATCCTACCTAGGTCTTCCTCTAGGCGATAACCCTAAAACCCTCTCCTTTTGGGATCTAGTCTTGGACAAGGTTCGTAAGAGATTGACTAATTGGAGGAAGAGTTATTTTTCAAAAGAGAGGAGACTCACTCTCATTCAGTCAGTCCTTAGTGGGATCCATGTGGTTTTTACGCCCCTCTTTAGGATGTCGGGTAAGGTTAATAAGGTTTTGGAAAAGCTAATGAGGGATTGTGGGAGGGGGTGGATGAACGGAAAGGGCCTCACCTTGTGAGTTGGGAGTTGTCTCTAGACCGGTTGACCTTGGAGGTTTAGGCATTGGTAATGTTAGGGCTAGGAACAAGGCCCTTTTGGTTAAATGGCTTTGGCGATTCTATCATGAAGCTGATACCTTTTGGCATAAAGTGACTGTAAATAAGTATGGTCCTCATCCTTTTGAGTGGATTGTTGGTAGGGCTTGCGACACCGGTAGAAACCCTTGGAAAAAAATCTCCTATGAGTTCCCTTTGTTCTCTCAGTTTGTGTGTTGTTGAGTGGGAGATGAGAGAGGAACTCTTTTTTGGGAGGAGGATGAGTGGCTGGGGGATCGCCCTCCCTACTCCGTGTTTCACCAGTTGTATCACTTATCCTGTTTTAAAAACCAGTCAGCGACATCCATCCTTCAGATAGATGATCATTCTTCCACCTCTGGAGTCTCTTTCTCTCCCTCTTTTGGGTTTTGTCGTGCTTTGATCTTTAGGGATACGACAAAGGTTACTGAGTTGTTGTCTCTCCTCTCCGAGGTCAACCTGAGGCCCAATAGGGGCGATGTTCGTATTTGGCGTCCTTGCCCTTCGAAAGGTTTTTCCTGTACGTCCTTCAAGTCTATTGATAATCCCAATCTCAGGGGTCTCTGTGTTCTCTTCGTTGTGGAAGGTGAAGATCCTCAAGAAGGTTAAGTTCTTGTTGTGGCAGGTTTCGCATGGTAAGGTTAACACTCTCGATCGAATCCTGGCAGAGGTTCTACCTTGGTGGGTCCTTTTTGTTGTGAGGGCTGCTGAGGACTTGAGCCATATCCTCTGGGATTGCTACTTCGCGTGTGGAGTGTAGAGCTGTTTATTGTCGGAGTTTGGTCTTAACTTTGTCCGTCGTTCCCACAATTGCACAGAGCTATTGGTGGGGCTTCTTTTGTTCTCGTCTTTTCGTGGACGAGAGTTGTTTTTATGGCAGGCGGGGGTTTATGCTACTGTCTGGTGTTTGTGGACTGAGAGGAACTATATAACTTTCAGGGGGTGTGAGAGATCGAGTAGTGATATTTGATCCCTTGTTAGATTTTATAGTTCCCTTTGGGCTTTGGTGTTGGAGCTTTTTTGTAACTATTCGCTTAGTTTTATTTTGCTAGATTGGAGCTCTTTTCTCTAAGTGGGTCTCATTTTTTGTGGGCTTTGTATTTGTATGCCCTTGTATTATTTCATTTCTTCTCAATGAAAGCTTGGTTTTTTCATTAAAAAAAAAAAAATTAAATTGGTATTTTGGTTATTGTTGGCCATTAGTTTTTATTATGTTTAGATTGAATTCTCCATGCCTTTTTATATGGATGGATTTGTGAAGGGTTGAAATTATCAATTTGTTGCCATGTCTAAATTCTTCCGGTATATGTTGGCAGATACCTGGGGTCCCACTCATATTTGGTTTGAGAAATACACTTTTCCTGGAGCAACCATCTGCCTTGGACCATCAATTTGTTAAATCTTTGGAAGAAAAAAGATCCCACATTTCTGAGGTTGAACATAATTTTTTACAGAAAATAACAAAGAAAATATTAACACAGTATGAAGTGGAAGCTGAGAAAACTAATGAAAATGGAGATGTGGGAGGTGATCAAAATTCAGAGATACAGGATTTGCAAAAGAAAAAGAAAAGAAATCTAAATGATTTGAAGGATAGACCACAATTTAAGAGAAAGAAAGCAAAGGTATTTTTCCATGATGACATTTTCTCTCTTCATTGTAGATTTGATTTTGTGCTTCATTTTGCATTATTGATTGATTAACTTCTTTACTAACTTGTGATTTTGATGTTTTGGTCATACTTGGAGCTTTCTATATTAAAATACCATGGAAGGAAGAGTCTGTAGTTTTTATATTGTTTTTTAGGGGAGTGCTTTGGACCCTAGTTTGTTTGCTAAAGGAATTGCACTAATAATTTGTATTTGACTATGAATGCATGTTTTGAAGATATATTTACTGATTTTTCATTCTTTTTATGGGATTTTTCAGCTTTGGTAGGTTCATACTTCTAGCCAATTCTTTTGTAATTACCCAATTGCATTGATATACAACAATTATTATTATTATTATTATTATTATTATTATTTTGTAATTGGGTTCTTGGGACGGGGTAGAAAGAAATTTAATGATACAAAACCAAGTTCTTTTTCATTACATTAATGAAAACTGATGTTTTTCTTCTTGACATGTACATTTTTCATTTACTGCTTCCTGTTTTCGATTGCATGCATGGTCTTGGCTTTTATATAGTGTCTTGATTAGAGTCACCAGATATGAGATTGGACTGGTTTCATGTGAAATTCCTTTTCGCTATTTTAGTTGCAATGTTCAAAGGCATTTATTTTAAACAGTGGTGTTACTTTAATAAATGTGCAATGAGGCACTGTTATTATATTTATTATTCATGGTGCCATTCTATTCTATTGCTGTTTTTAGTTATTATATGATATATGATATATGATATGATTACATCTATCACTCAGACCATTTTTCTTGATTGCTTTCATTTTCTAATCTCTCCACAAAACTCTGCAGGGTCCAAATCCTCTTTCATGTTTGAAGAAGAAGAAAAAGGTTAATCCAAACCAACATCCAGTTTCAGAGAAGGTACTTTTGCATCTTATATAATTTTCAAATTATTGTTAAACGATTGCATCACATGTTTTAATTTCTGTATTATTATTATTATTTTTTTGAGTACATCAACAAATTGGAGGGGGGGATTCGAACTCATGACTTCTTGGTCATGAGTCATACTTGATGGCAGTTGAGCTACGCTCTTGTTGGCTTATTATTATTATTATTTGATAGGATTCAAAAATTCATTGAATGAAATGAAAACCAATAGAGATAAGAGACTAATCCTGTTAGATTTCAGTCATAAGTCGTAACTGAAATATGTTTGAGTTTTATTCTTTTATTATTTGCATCTGTTCTTAAACTTGTCTAACGTGAATAATACCATTGAAGTCCTCAAGCTTTAAAAAAAACTATTTTGGTCATTTATATTATTTTGCCATTTGATACCCACCCAATAGTATACTGACCTCAAAAAACCTATGTCACTCAAAGTTACAATATTCATTTGTTAGAAGCAAAATAAACTTAAGAGCCAAAGTTATTAATTTTTAAAGTTTAGGGACTATAACTTATATTTTGAAGTTCAAAGACAAAAATAGAATAACTTTGAGAGTTCAAAGGCCAAAATGATGGATTTGAAAGCTTACAGACTAAAATAGAATAATTTCGAAAGTTTCGATATCAAAATGGGATTTTAGTCTGAAATATTCTTGAAAATTGATGTCTCAATCCAAGGAAATTTGAATATAGCCATGACTCATTGTTATTTAGTTTTATCGGTAGCTATTTTTGAATGTGGAAAGTGGATAGTTCTAAATGTGTATTTGTATTTATTTATTTCTAGAACTGTTTCTGTAAAAATGTAAGAATGGGTAAGGGAGACCAGGGATTCAACTTTTTGATACTCTCCAGTCTCCATGGTTCATAATTTATATTATCTTAAAAGCCAAATATTCCAATAATTTTCTCTGAGACTGGTATTTGAAGGTGACATATTATGTCTAGCATCCTAGAAAACTCTTAAAATAGGTTCCTTTTTCATTGTGAGATAGTCATTGGAATAAACCTCATTACTTTATTTCAATGTTTGTATTAATACATATTTGTGCTCTTGGGTTGTGATTGGATTATCCATCTTATGCTGCAGGAGGAGGATGGCGATAATGCTACTAAAAAAAGGACTCGTAAACGAAAGCGGTCACGAAAGACCAAAACGCCAGTAGAGACGAGCACGCCATAGTTGGTTCCTCATCTGATGTGGCTTTGGCAATTTTGATGCTTTGTGGTAAATGGTAGAATGCTTTTGTTTTAACTTTTAAAATGCATCCCTAGCTCTAGAGGGTTAGAAGATGGTACTTAGATGGGAGGTTTTCGTCTTCCCTTAAAAAGTTGTAGCTTCCATAGATAAAGGAAATTGGATTATAATAATACTTAGGTCAATATTATGCCAACATAAGCTATCTTCAATCCAAGAGGTCAGAGATACGAATCGTTACTTCCACATGTTGATACTGGTCAATATTGTTTTTGTGAGCAAAGGAAATTGATTCTTTGACTCTCTACGAGCCTAGCTGCAAACGAAAATAGATCGTTTCATTTTGTAAGGCAGTTTATATGTTTTTGCTATTTTAAGGTAGACAGGTTTTGTTTTTGGGGGCTTTTGCTCCTTTGGGAGAACTTAGATTTAAATGTGGTCATCGAACTTTTGATATTTAATTATTTTGGTCTTTAAATATTTTTGGTAGTTCACTTTATACTTGAGTTTTAACTTGAAAGTTGCAATTTCATCAAAATTGAAGTTGAACTTAAATAAAGGGTGAAACTAATATGTGGTTAGTTTTGGGCAGACTACTTTTTTGTACTAGGTTTTCCAGTTGGGGCTGGATTTTTTTTTTTTGAGTTTAAATCTCAGTTTATCTCCTAAGTGTTTGGATTATTTTAGACCTTTTAGTTTCTTAGGTCTCGTTTGTTAACCATTTAGATTTTAAAAAATGTTCTTGTTTTCTCACTATTTCTCTTCAATGGGTTTCTTTCTTTAAAAATTATTTGTGGAGCGTTTGGATCACCGTTTCAGAATCAAAATCTTTAGAATTGAAATCTTGGGGGGTTTGTTCTAAGGAGTTTAAAACCTTGAAAATCAGAAAACGGTATTTGGTATGTAGTGTTTGATGTCTGAGAATTAGCGAAATTATGTTGGAATTAACAAAACAAAACTATGGAATTCTGTTTCAAACCCATTGAGTTTTGAACACAATAATCCAAACAATGTTTTGGATTTGGATTCCAAAATCATTCAAACTCAAGACGATGCTCCAAACGCCTCCTTGAATTCTTGGTCAAATTTCAAAAGTAAAAACAAGTTCTTAATTTAATTATTATTATTATTATTTAAAATTTAGTTTGGTTTTTGGAAACAATAAATAAAAGTGAATAACAAAGCAAAAACTCATGGGAAGTAGTGTTCATAAGCTTAATATACCTTACTAATTTTTAGTTTTTTTAATTAAAAATTTATTCATTCATTTATTTTATTTTTTATTTTTTCCTTATCCTTTCTTCTTCTTCCTTCCTCATCCTCCTGCTTCTTCTTAAACCTAATTGTCCGTCGTTGTTCGCTTGCCTGCCCATGCCCAAACGCCATCACCACCACTATTCGCCTGTCGTTGTAGTCGCTCGCCCCCCACTGCGCCCCTACTCAAATGTCGTCGCCTTCTTTCTCTTCTTATTCTTTCTCCCTCTTCTTTCCATTAACAAAAAACTCACACTCGAATGCTGCCACCCATGCCCAAACACTATTACTGTCGCTGGATCACCCGCCGCTCGTCGTCACACGCGTCGGCGTTGCATTGCAGTCGCATGCTTCTGCAGATCCACATGCCACCATCAATGCTCGATCTTGTTGTTCGTGTTGCCCATCGTGCAGATCTATACTGTCGTTCTTGAAAAAGGCTATCATGGCAAGCGAGCGATGACAACAACAGTCGATCCGACGACGACAACAATATTTGGGCGTGGGCAGATGGCAGTGGGGGGCTGGGTTTAAAGACGAAGGAGGAGGATGAAGAAGGAAAAAGAAGAAAGAAGAAGGGGAAAAAAAAATTAATTAAAAAATTTAAATAACTAAATAATAATAAAATGATACTTTTAATAAAAAATAGGTGCTACATAACCTTTCGACTTACAGAAAATTAGATGAAAGGACTAACAATATAACTGTACACAAAACTTGAGGGTACATTTATTGGGCTTGAAAACTCAGGGACCAGAAGGGAACCAAATGTAAAATTGAGAGACCAAAAATGTATTTTGCTCTAAATTATTTGTTGAGATCGTCACAATGTAGCTAGTGAGTGATTTTTCTCTGTTAGATGTAGAGAGATAAGTATCTCAAACTTATATAACCCATTATAGCATGACCATGTGCACAAAATACCCACAATAGCAGTATGAGGTCGTCTCGTTTGTTCACGCTCTCAAACATAATAATACTCTCGTTGACTGTTCTCGCTCTCGCTAGTCACGCAACATATATTTTTGGATCTTACAAGATTTTTGCTCACAGAGACGAGATTTCACACACGTTGCCTCGTTATTGCTCTCACCGGACACGCCACTCGATCATTTTTACGAATGTTGTACTCGTTCTTGCTCGCTCGTTCTCTCATGCTCTCACTCTCGCCTGTGGTATGTACAAACATTATGTGAGATGTTGTAGTCTATTAACTGAAAACATAATGTGAGATGTTGTAGTCTATTAACTGAAAATACTGACAAAGAAAAGATCTCAATCCATATTTCCCAATAAATCTTTTAAATTAATAACTTATATAAAATTATTATGGCTTATATCAAACAAAAACCAATTCTTTGAGGGCCCCTAGTGAGTGAAGATTGGGACAATACTGATCGAATTCTACATGCAAGTACACGTAATTGAAGCAATAGAACTGGAAGTACTCTAGAGTATCGTACCCACAAAGAACAAATTTTAGCAATTTTAAGTGAAAAATAGGATAAGTTAACAATAATGCAAGTGTGATAACCAAGTTTGTAAAAATGTTTTTGAAGAGTATCTATTGCTACTCATAATTAAGGGAAATTCAATGATTTAAAAGAAGAGAATTCAAATTGTTTTGCCCCTTTGAAGAAAATGCTACTAAAAATGCAATTGTATGACTAATCTAGCTTAAATTTATTGGCACACAATCCTAGTGGCTTTGGAGTCTCACCTTATGTCTAGGGCCAAAGTTTCAGATCTTATTTCTAAGTCATTTCCTCCATTTCTTTTACGAAATCTGCTATTCCTTAACCCTTTTTGGTATTAAGTTCTAGCTTTGATGAGCAAGCACTAGCCGGTCGGCTAGATTTACCCACGTTAAGTTCAATAAAAACAAACTAGGTTTTACGTGTCGACTCGATCGATTTTGCTACTTTAAGCTTAGCATCTCTCCTCTAGGGCATTCATAACTTGAATCCCTAGAGAGGATTTAGCCCATGATGGAAATTAAGAAAAACAAAAATCTATTTGTTGAAATCTTCATGGAATTCGAGAAAACTAGAAAAGTGACCTAAAAGAATATAACTAACACCTACTTGATTCATTACTCTACAAACCCTACCTCAAATCGTGACTTTTATTCAAGATGATAAAAGAAAAACAATAAGCAAAAATGTTTGAATCACTTGATGAAAAATATTTAGGCTCTTGGTCTTGGCCTTTTTACTAATAATGGAAGAAAAATACAAGAACTACAACTTGACTTCACTAGATGACTAGTTAACCGAACATGAATAATTACAAACTAAAGATGAAAAACTTATAACAAGAAAGCAACACGGTGTTCAAACTTGAGCATAAAACAAAAACTCAAAGAAAGTCTTAAGAACTCTCTTATTGGTCGACTCCAAGAACTCGTTTAAAGGTTGTCGATCTTCACCTTCTATATTTTCTTAAATTTTTTTTGAGATATGACATATTGAGGAGTTTAGGTTCTTCAACGTTAATGACACATGGATATTTATGTGAAATTTTTATTTTTACACACTCGTTTTTAGTTCTTAGGTATTTATTGTTGATTTTATTTTTTTTTAAGGGTTGACTTCTTTACTATGTGAAATTTGACTTTAGACTTTGTTGAACGCCATTTATCATATGTATTTTTTACTTTAATATGTTGGACAATGTACGTATATATTTAATGTTTAACTTTAATATATTTGGATGTGAACTTTATGATAGAAACTGAGATTACCTTGAATTTGGAGACATGTCTGTTATGATTATTATTTTGGTATGTGTATAATGCATGTTTGGTTATTATTTTCATTAGAGAAATTTTTAATTGCAGAAAATATTAAAACAAGGGGTGAGTTGAGAGTCTGGAAGTAGAGCAAGTCACTCAATCAACAAAGCAAGGGAGGAAATCTGT

mRNA sequence

CTTTTGCATAAACGGCTTTTTCAGGTATAAGGTTTTAGGTTTCACAGTCTCACTCTCCTTTCTCAGTTTTTATTTCTCTCCGCCGTCGACGGTCGCCGGTGACTCCCCACCACCAATTTGCTCTTCTTCTTTATCTGCTGCAACCGAAGTCTGCTCTGACCGGTCACGCAGTCGGAAAATACCCCCCACCGAAACACGGGAACAAGATGGGATTGAAAAAACAAAAGCGTCAACGGAAAACTGTGGGATTTTACACTACATGTTTTGGATTCAGGGAGCCGTTTAAAGTCTTTTGTGATGGAACTTTCGTTTATCATCTTCTCTCCAATCAGCTATTGCCGGCCGATGATGCCATTGCTAAAGTTCTTGGTGGCCGAGTCAAGCTTTTCACCACCAGATGTATACTCTTAGAGTTGAAGGCCCGTGGCCGACCCCTCTCTAACGTTTTAGAGGCATCCAGTAAGCTGTTTATTGCAAGATGTAACCATGAGAGAAGAGTGCATGGTGTGACATGCATCATGGATGTGATTGGTAAATCGAACGCTGAACATTTTTTTGTTGGCACTCAAGATGCTGATCTTAAGAAGCAGCTTCGAGAGATACCTGGGGTCCCACTCATATTTGGTTTGAGAAATACACTTTTCCTGGAGCAACCATCTGCCTTGGACCATCAATTTGTTAAATCTTTGGAAGAAAAAAGATCCCACATTTCTGAGGTTGAACATAATTTTTTACAGAAAATAACAAAGAAAATATTAACACAGTATGAAGTGGAAGCTGAGAAAACTAATGAAAATGGAGATGTGGGAGGTGATCAAAATTCAGAGATACAGGATTTGCAAAAGAAAAAGAAAAGAAATCTAAATGATTTGAAGGATAGACCACAATTTAAGAGAAAGAAAGCAAAGGGTCCAAATCCTCTTTCATGTTTGAAGAAGAAGAAAAAGGTTAATCCAAACCAACATCCAGTTTCAGAGAAGGAGGAGGATGGCGATAATGCTACTAAAAAAAGGACTCGTAAACGAAAGCGGTCACGAAAGACCAAAACGCCAGTAGAGACGAGCACGCCATAGTTGGTTCCTCATCTGATGTGGCTTTGGCAATTTTGATGCTTTGTGAAAATATTAAAACAAGGGGTGAGTTGAGAGTCTGGAAGTAGAGCAAGTCACTCAATCAACAAAGCAAGGGAGGAAATCTGT

Coding sequence (CDS)

ATGGGATTGAAAAAACAAAAGCGTCAACGGAAAACTGTGGGATTTTACACTACATGTTTTGGATTCAGGGAGCCGTTTAAAGTCTTTTGTGATGGAACTTTCGTTTATCATCTTCTCTCCAATCAGCTATTGCCGGCCGATGATGCCATTGCTAAAGTTCTTGGTGGCCGAGTCAAGCTTTTCACCACCAGATGTATACTCTTAGAGTTGAAGGCCCGTGGCCGACCCCTCTCTAACGTTTTAGAGGCATCCAGTAAGCTGTTTATTGCAAGATGTAACCATGAGAGAAGAGTGCATGGTGTGACATGCATCATGGATGTGATTGGTAAATCGAACGCTGAACATTTTTTTGTTGGCACTCAAGATGCTGATCTTAAGAAGCAGCTTCGAGAGATACCTGGGGTCCCACTCATATTTGGTTTGAGAAATACACTTTTCCTGGAGCAACCATCTGCCTTGGACCATCAATTTGTTAAATCTTTGGAAGAAAAAAGATCCCACATTTCTGAGGTTGAACATAATTTTTTACAGAAAATAACAAAGAAAATATTAACACAGTATGAAGTGGAAGCTGAGAAAACTAATGAAAATGGAGATGTGGGAGGTGATCAAAATTCAGAGATACAGGATTTGCAAAAGAAAAAGAAAAGAAATCTAAATGATTTGAAGGATAGACCACAATTTAAGAGAAAGAAAGCAAAGGGTCCAAATCCTCTTTCATGTTTGAAGAAGAAGAAAAAGGTTAATCCAAACCAACATCCAGTTTCAGAGAAGGAGGAGGATGGCGATAATGCTACTAAAAAAAGGACTCGTAAACGAAAGCGGTCACGAAAGACCAAAACGCCAGTAGAGACGAGCACGCCATAG

Protein sequence

MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKLFTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGTQDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKITKKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKRNLNDLKDRPQFKRKKAKGPNPLSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVETSTP

Homology

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BLAST of Tan0013534 vs. ExPASy Swiss-Prot
Match: Q9CX11 (rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.9e-30
Identity = 94/280 (33.57%), Postives = 145/280 (51.79%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M + +QK  +K +GF+   FG REP+++  DGTF    L  + +   D + + L G  +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGR-IQLRDQLPRYLMGETQL 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNH-ERRVHGVTCIMDVIGKSNAEHFFVG 120
            TTRC+L EL+  G+ L      + K  +  C H +  V G  C++ ++ + N  H+FV 
Sbjct: 61  CTTRCVLKELETLGKELYGAKLIAQKCQVRNCPHFKSPVSGSECLLSMVDEGNPHHYFVA 120

Query: 121 TQDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKI 180
           TQD +L  +++  PG+PL+F ++NT+ L++PS     FVK++E                 
Sbjct: 121 TQDQNLSVKVKRTPGIPLMFIIQNTIVLDKPSPRTVAFVKAVE----------------- 180

Query: 181 TKKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKRNLNDLKDRPQFKRKKAKGPNPL 240
             ++++ +E ++ K          Q  E Q L +       DL+ R + K+KK  GPNPL
Sbjct: 181 AGQLVSVHEKQSIK----------QLKEEQGLVRNP-----DLRRRRR-KKKKVGGPNPL 237

Query: 241 SCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKT 280
           SCLKKKKK    + P SE         KKR RKR R+R T
Sbjct: 241 SCLKKKKKAQDTKSPASE---------KKRKRKRIRNRST 237

[Close]

BLAST of Tan0013534 vs. ExPASy Swiss-Prot
Match: Q9BRU9 (rRNA-processing protein UTP23 homolog OS=Homo sapiens OX=9606 GN=UTP23 PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-28
Identity = 93/283 (32.86%), Postives = 146/283 (51.59%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M + +QK  +K +GF+   FG REP+++  DGTF    L  + +   + + + L G  +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGR-IQLREQLPRYLMGETQL 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNH-ERRVHGVTCIMDVIGKSNAEHFFVG 120
            TTRC+L EL+  G+ L      + K  +  C H +  V G  C++ ++ + N  H+FV 
Sbjct: 61  CTTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVA 120

Query: 121 TQDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKI 180
           TQD +L  ++++ PGVPL+F ++NT+ L++PS     FVK++E                 
Sbjct: 121 TQDQNLSVKVKKKPGVPLMFIIQNTMVLDKPSPKTIAFVKAVE----------------- 180

Query: 181 TKKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKRNLNDLKDRPQFKRKKAKGPNPL 240
           + ++++ +E E+ K +   + G  +N+E    Q ++K            KRKK  GPNPL
Sbjct: 181 SGQLVSVHEKESIK-HLKEEQGLVKNTE----QSRRK------------KRKKISGPNPL 237

Query: 241 SCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTP 283
           SCLKKKKK    Q   SEK+           RKRKR R    P
Sbjct: 241 SCLKKKKKAPDTQSSASEKK-----------RKRKRIRNRSNP 237

[Close]

BLAST of Tan0013534 vs. ExPASy Swiss-Prot
Match: Q08DU1 (rRNA-processing protein UTP23 homolog OS=Bos taurus OX=9913 GN=UTP23 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 90/280 (32.14%), Postives = 142/280 (50.71%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M + +QK  +K +GF+   FG REP+++  DGTF    L  + +   + + + L    +L
Sbjct: 1   MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGR-IQLREQLPRYLMAETQL 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNH-ERRVHGVTCIMDVIGKSNAEHFFVG 120
            TTRC+L EL+  G+ L      + K  +  C H +  V G  C++ ++   N  H+F+ 
Sbjct: 61  CTTRCVLKELETLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEDGNPHHYFLA 120

Query: 121 TQDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKI 180
           TQD +L  ++++ PG+PL+F ++NT+ L++PS     FVK++E                 
Sbjct: 121 TQDQNLSMKVKKKPGIPLMFIIQNTIVLDKPSPKTIAFVKAVE----------------- 180

Query: 181 TKKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKRNLNDLKDRPQFKRKKAKGPNPL 240
           + ++++ +E ++ +          Q  E Q L K       D + R + KRKK  GPNPL
Sbjct: 181 SGQLVSVHEKQSIR----------QLKEEQGLVK-------DPEQRRRKKRKKVSGPNPL 236

Query: 241 SCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKT 280
           SCLKKKKK        SE         KKR RKR R+R T
Sbjct: 241 SCLKKKKKTQDTNSSASE---------KKRKRKRIRNRST 236

[Close]

BLAST of Tan0013534 vs. ExPASy Swiss-Prot
Match: O74862 (rRNA-processing protein utp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp23 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-19
Identity = 78/278 (28.06%), Postives = 126/278 (45.32%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M  K+ K  RK +  Y   FGFREP++V  D  F+   LS Q +    A+A+ + G +K 
Sbjct: 1   MRQKRAKNYRKLMHTYQLLFGFREPYQVLVDADFLKD-LSQQKIDIQAALARTVQGAIKP 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNH-ERRVHGVTCIMDV--IGKSNAEHFF 120
             T+C + +L ++   L   +  +      RC H +  +    CI  V  I   N   + 
Sbjct: 61  MITQCCIRQLYSKSDELKQEIRIAKSFERRRCGHIDEALSPSECIQSVVNINGRNKHRYV 120

Query: 121 VGTQDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQ 180
           V TQD +L++ LR +PGVPLI+  R+ + LE P++      K  +E        E   L 
Sbjct: 121 VATQDPELRQALRSVPGVPLIYMKRSVVILE-PASRATLLEKHNKESVQMGMSKEEKLLL 180

Query: 181 KITKKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKRNLNDLKDRPQFKRKKAKGPN 240
              K+   +  ++ + T E+ D+ G ++S                  +   KRK  KGPN
Sbjct: 181 SGKKRSANELAIDDQDTKESTDLAGTEDS----------------APKANKKRKGPKGPN 240

Query: 241 PLSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKR 276
           PLS  K+  K +    P       GD   +K+ R++++
Sbjct: 241 PLSIKKRSSKNHTTDEPTLPVNIIGDVGERKKHRRKRK 260

[Close]

BLAST of Tan0013534 vs. ExPASy Swiss-Prot
Match: Q12339 (rRNA-processing protein UTP23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP23 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-15
Identity = 89/292 (30.48%), Postives = 128/292 (43.84%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M  K+ K  RK +  Y+  F FREP++V  D   V    +N        + + L   VK+
Sbjct: 1   MRQKRAKSYRKQLLVYSHTFKFREPYQVLVDNQLVLE-CNNSNFNLPSGLKRTLQADVKV 60

Query: 61  FTTRCILLEL-KARGRPLSNVLEASSKLFIARCNHERR--VHGVTCIMDVIGKS--NAEH 120
             T+C +  L + R     N+ +   +    RCNH  +       CI  V+  S  N   
Sbjct: 61  MITQCCIQALYETRNDGAINLAKQFER---RRCNHSFKDPKSPAECIESVVNISGANKHR 120

Query: 121 FFVGTQDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNF 180
           + V +QD DL+++LR +PGVPLI   R+ + +E  S    +  K  EE            
Sbjct: 121 YVVASQDIDLRRKLRTVPGVPLIHLTRSVMVMEPLSTASAKASKITEE------------ 180

Query: 181 LQKITKKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKRNLNDLKDRPQFKRKKAKG 240
            QK+ K +    +   EK  E+GD  G ++         KKR L              K 
Sbjct: 181 -QKLYKGL---NDPNIEKLQESGDGSGKESI-------TKKRKLG------------PKA 240

Query: 241 PNPLSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVETST 288
           PNPLS +KKKKKVN     V +KE+   +  KK+ R+RK    T  PV   T
Sbjct: 241 PNPLS-VKKKKKVNSPSDEVKDKED--TSKEKKKRRRRKHKSNTNVPVSNGT 250

[Close]

BLAST of Tan0013534 vs. NCBI nr
Match: KAG6601964.1 (Proline-rich receptor-like protein kinase PERK3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 401.7 bits (1031), Expect = 5.2e-108
Identity = 219/290 (75.52%), Postives = 242/290 (83.45%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M  KKQKR RK V FYTTCFGFREPFKV CDGTFV+HLLSNQ+LPAD A+AKVLGGRVK+
Sbjct: 398 MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 457

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGT 120
           FTTRC+LLELKA G   S   EA+S L  ARC+HE R H VTCIM+VIGKSNAEHFFV T
Sbjct: 458 FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 517

Query: 121 QDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKIT 180
           QD DLKKQL+EIPGVPLIFGLRN LF+EQP+AL+ QFVKSLEEKRSHISEVE N L+K+T
Sbjct: 518 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSLEEKRSHISEVELNLLRKVT 577

Query: 181 KKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKR--NLNDLKDRPQFKRKKAKGPNP 240
           K      E E EKTNE+GD+  D+NSE+Q L+KKKK+  NLNDLKDRPQFKRKK KGPNP
Sbjct: 578 K----DDEEETEKTNEDGDL-VDKNSEMQVLEKKKKKKGNLNDLKDRPQFKRKKTKGPNP 637

Query: 241 LSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVETSTP 289
           LSCLKKKKKV+PNQHPVSEK+ D DN T KRTRKRKR+RKTKT  ET  P
Sbjct: 638 LSCLKKKKKVDPNQHPVSEKKAD-DNTT-KRTRKRKRARKTKTTAETGAP 680

[Close]

BLAST of Tan0013534 vs. NCBI nr
Match: XP_022990879.1 (rRNA-processing protein UTP23 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 400.2 bits (1027), Expect = 1.5e-107
Identity = 219/290 (75.52%), Postives = 241/290 (83.10%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M  KKQKR RK V FYTTCFGFREPFKV CDGTFV+HLLSNQ+LPAD A+AKVLGGRVK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGT 120
           FTTRC+LLELKA G   S   EA+S L  ARC+HE R H VTCIM+VIGKSNAEHFFV T
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKIT 180
           QD DLKKQL+EIPGVPLIFGLRN LF+EQP+AL+ QFVKS EEKRSHISEVE N LQK+T
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 KKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKR--NLNDLKDRPQFKRKKAKGPNP 240
           K      E E E TNE+GD+ G +NSE+Q L+KKKK+  NLNDLKDRPQFKRKK KGPNP
Sbjct: 181 K----DDEEETEITNEDGDLVG-KNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNP 240

Query: 241 LSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVETSTP 289
           LSCLKKKKKV+PNQHPVSEK+ D DN T KRTRKRKR+RKTKT  ET TP
Sbjct: 241 LSCLKKKKKVDPNQHPVSEKKAD-DNTT-KRTRKRKRARKTKTTAETGTP 283

[Close]

BLAST of Tan0013534 vs. NCBI nr
Match: KAG7032659.1 (rRNA-processing protein UTP23-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 399.4 bits (1025), Expect = 2.6e-107
Identity = 218/290 (75.17%), Postives = 241/290 (83.10%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M  KKQKR RK V FYTTCFGFREPFKV CDGTFV+HLLSNQ+LPAD A+AKVLGGRVK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGT 120
           FTTRC+LLELKA G   S   EA+S L  ARC+HE R H VTCIM+VIGKSNAEHFFV T
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKIT 180
           QD DLKKQL+EIPGVPLIFGLRN LF+EQP+AL+ QFVKS EEKRSHISEVE N L+K+T
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLRKVT 180

Query: 181 KKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKR--NLNDLKDRPQFKRKKAKGPNP 240
           K      E E EKTNE+GD+  D+NSE+Q L+KKKK+  NLNDLKDRPQFKRKK KGPNP
Sbjct: 181 K----DDEEETEKTNEDGDL-VDKNSEMQVLEKKKKKKGNLNDLKDRPQFKRKKTKGPNP 240

Query: 241 LSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVETSTP 289
           LSCLKKKKKV+PNQHPVSEK+ D DN T KRTRKRKR+RKTKT  ET  P
Sbjct: 241 LSCLKKKKKVDPNQHPVSEKKAD-DNTT-KRTRKRKRARKTKTTAETGAP 283

[Close]

BLAST of Tan0013534 vs. NCBI nr
Match: XP_022990880.1 (rRNA-processing protein UTP23 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 399.4 bits (1025), Expect = 2.6e-107
Identity = 217/290 (74.83%), Postives = 239/290 (82.41%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M  KKQKR RK V FYTTCFGFREPFKV CDGTFV+HLLSNQ+LPAD A+AKVLGGRVK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGT 120
           FTTRC+LLELKA G   S   EA+S L  ARC+HE R H VTCIM+VIGKSNAEHFFV T
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKIT 180
           QD DLKKQL+EIPGVPLIFGLRN LF+EQP+AL+ QFVKS EEKRSHISEVE N LQK+T
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 KKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKR--NLNDLKDRPQFKRKKAKGPNP 240
           K      E E E TNE+GD+ G +NSE+Q L+KKKK+  NLNDLKDRPQFKRKK KGPNP
Sbjct: 181 K----DDEEETEITNEDGDLVG-KNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNP 240

Query: 241 LSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVETSTP 289
           LSCLKKKKKV+PNQHPVSEK +D    T KRTRKRKR+RKTKT  ET TP
Sbjct: 241 LSCLKKKKKVDPNQHPVSEKADDN---TTKRTRKRKRARKTKTTAETGTP 282

[Close]

BLAST of Tan0013534 vs. NCBI nr
Match: XP_022923049.1 (rRNA-processing protein UTP23 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 396.4 bits (1017), Expect = 2.2e-106
Identity = 217/287 (75.61%), Postives = 239/287 (83.28%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M  KKQKR RK V FYTTCFGFREPFKV CDGTFV+HLLSNQ+LPAD A+AKVLGGRVK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGT 120
           FTTRC+LLELKA G   S   EA+S L  ARC+HE R H VTCIM+VIGKSNAEHFFV T
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKIT 180
           QD DLKKQL+EIPGVPLIFGLRN LF+EQP+AL+ QFVKS EEKRSHISEVE N LQK+T
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 KKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKR--NLNDLKDRPQFKRKKAKGPNP 240
           K      E E E TNE+GD+ G +NSE+Q L+KKKK+  NLNDLKDRPQFKRKK KGPNP
Sbjct: 181 K----DDEEETEITNEDGDLVG-KNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNP 240

Query: 241 LSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVET 286
           LSCLKKKKKV+PNQHPVSEK+ D DN T KRTRKRKR+RKTKT  ET
Sbjct: 241 LSCLKKKKKVDPNQHPVSEKKAD-DNTT-KRTRKRKRARKTKTTAET 280

[Close]

BLAST of Tan0013534 vs. ExPASy TrEMBL
Match: A0A6J1JT87 (rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487635 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 7.3e-108
Identity = 219/290 (75.52%), Postives = 241/290 (83.10%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M  KKQKR RK V FYTTCFGFREPFKV CDGTFV+HLLSNQ+LPAD A+AKVLGGRVK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGT 120
           FTTRC+LLELKA G   S   EA+S L  ARC+HE R H VTCIM+VIGKSNAEHFFV T
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKIT 180
           QD DLKKQL+EIPGVPLIFGLRN LF+EQP+AL+ QFVKS EEKRSHISEVE N LQK+T
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 KKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKR--NLNDLKDRPQFKRKKAKGPNP 240
           K      E E E TNE+GD+ G +NSE+Q L+KKKK+  NLNDLKDRPQFKRKK KGPNP
Sbjct: 181 K----DDEEETEITNEDGDLVG-KNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNP 240

Query: 241 LSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVETSTP 289
           LSCLKKKKKV+PNQHPVSEK+ D DN T KRTRKRKR+RKTKT  ET TP
Sbjct: 241 LSCLKKKKKVDPNQHPVSEKKAD-DNTT-KRTRKRKRARKTKTTAETGTP 283

[Close]

BLAST of Tan0013534 vs. ExPASy TrEMBL
Match: A0A6J1JRB3 (rRNA-processing protein UTP23 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487635 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.2e-107
Identity = 217/290 (74.83%), Postives = 239/290 (82.41%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M  KKQKR RK V FYTTCFGFREPFKV CDGTFV+HLLSNQ+LPAD A+AKVLGGRVK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGT 120
           FTTRC+LLELKA G   S   EA+S L  ARC+HE R H VTCIM+VIGKSNAEHFFV T
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKIT 180
           QD DLKKQL+EIPGVPLIFGLRN LF+EQP+AL+ QFVKS EEKRSHISEVE N LQK+T
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 KKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKR--NLNDLKDRPQFKRKKAKGPNP 240
           K      E E E TNE+GD+ G +NSE+Q L+KKKK+  NLNDLKDRPQFKRKK KGPNP
Sbjct: 181 K----DDEEETEITNEDGDLVG-KNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNP 240

Query: 241 LSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVETSTP 289
           LSCLKKKKKV+PNQHPVSEK +D    T KRTRKRKR+RKTKT  ET TP
Sbjct: 241 LSCLKKKKKVDPNQHPVSEKADDN---TTKRTRKRKRARKTKTTAETGTP 282

[Close]

BLAST of Tan0013534 vs. ExPASy TrEMBL
Match: A0A6J1E579 (rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430840 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.0e-106
Identity = 217/287 (75.61%), Postives = 239/287 (83.28%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M  KKQKR RK V FYTTCFGFREPFKV CDGTFV+HLLSNQ+LPAD A+AKVLGGRVK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGT 120
           FTTRC+LLELKA G   S   EA+S L  ARC+HE R H VTCIM+VIGKSNAEHFFV T
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKIT 180
           QD DLKKQL+EIPGVPLIFGLRN LF+EQP+AL+ QFVKS EEKRSHISEVE N LQK+T
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 KKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKR--NLNDLKDRPQFKRKKAKGPNP 240
           K      E E E TNE+GD+ G +NSE+Q L+KKKK+  NLNDLKDRPQFKRKK KGPNP
Sbjct: 181 K----DDEEETEITNEDGDLVG-KNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNP 240

Query: 241 LSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVET 286
           LSCLKKKKKV+PNQHPVSEK+ D DN T KRTRKRKR+RKTKT  ET
Sbjct: 241 LSCLKKKKKVDPNQHPVSEKKAD-DNTT-KRTRKRKRARKTKTTAET 280

[Close]

BLAST of Tan0013534 vs. ExPASy TrEMBL
Match: A0A6J1E589 (rRNA-processing protein UTP23 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430840 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.8e-106
Identity = 215/287 (74.91%), Postives = 237/287 (82.58%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M  KKQKR RK V FYTTCFGFREPFKV CDGTFV+HLLSNQ+LPAD A+AKVLGGRVK+
Sbjct: 1   MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKV 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGT 120
           FTTRC+LLELKA G   S   EA+S L  ARC+HE R H VTCIM+VIGKSNAEHFFV T
Sbjct: 61  FTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIMEVIGKSNAEHFFVAT 120

Query: 121 QDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKIT 180
           QD DLKKQL+EIPGVPLIFGLRN LF+EQP+AL+ QFVKS EEKRSHISEVE N LQK+T
Sbjct: 121 QDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVT 180

Query: 181 KKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKR--NLNDLKDRPQFKRKKAKGPNP 240
           K      E E E TNE+GD+ G +NSE+Q L+KKKK+  NLNDLKDRPQFKRKK KGPNP
Sbjct: 181 K----DDEEETEITNEDGDLVG-KNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNP 240

Query: 241 LSCLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVET 286
           LSCLKKKKKV+PNQHPVSEK +D    T KRTRKRKR+RKTKT  ET
Sbjct: 241 LSCLKKKKKVDPNQHPVSEKADDN---TTKRTRKRKRARKTKTTAET 279

[Close]

BLAST of Tan0013534 vs. ExPASy TrEMBL
Match: A0A1S3CNY6 (rRNA-processing protein UTP23 homolog OS=Cucumis melo OX=3656 GN=LOC103503039 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 6.4e-96
Identity = 193/287 (67.25%), Postives = 229/287 (79.79%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M +KKQKRQR+ V FYTTC GFR PFK+FCDGTFV HLLSNQ++PAD+A+AK +G RVKL
Sbjct: 1   MRIKKQKRQRRAVRFYTTCCGFRPPFKIFCDGTFVNHLLSNQIMPADEAVAKTVGDRVKL 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGT 120
           FTTRC+LLELKA G+  +   EA+S+LF ARC+HE+R     CI+DVIG+SN EHFFV T
Sbjct: 61  FTTRCVLLELKALGQSYAGAFEAASQLFTARCDHEKRKSAEACILDVIGESNPEHFFVAT 120

Query: 121 QDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKIT 180
           QD +L+KQL++IPGVPLIFGLRNTLF+EQPS +  QFVKSLEEKR H+SE E + L+K  
Sbjct: 121 QDTNLRKQLQQIPGVPLIFGLRNTLFMEQPSDVQRQFVKSLEEKRMHMSEAERDLLKKKM 180

Query: 181 KKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKRNLNDLKDRPQFKRKKAKGPNPLS 240
           K     Y VEAEKTNE+ D+ GDQN + Q L KKKK  L++LKDRPQFKR KAKGPNPLS
Sbjct: 181 K-----YVVEAEKTNEDEDL-GDQNLDAQVL-KKKKNILSNLKDRPQFKRNKAKGPNPLS 240

Query: 241 CLKKKKKVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKTKTPVETST 288
           CL  KKKV P+ HPVSEK++D D+  +KRTRKRKRSRK K P ET T
Sbjct: 241 CL--KKKVKPSPHPVSEKKKDDDDLAQKRTRKRKRSRKAKAPTETVT 278

[Close]

BLAST of Tan0013534 vs. TAIR 10
Match: AT2G34570.1 (PIN domain-like family protein )

HSP 1 Score: 231.5 bits (589), Expect = 8.6e-61
Identity = 128/286 (44.76%), Postives = 181/286 (63.29%), Query Frame = 0


Query: 1   MGLKKQKRQRKTVGFYTTCFGFREPFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKL 60
           M +K+QK+ R+TV F+T C+GFR+P+KV CDGTFV+HL++N++ PAD A++++LGG VKL
Sbjct: 1   MRVKRQKKNRRTVRFFTVCYGFRQPYKVLCDGTFVHHLVTNEITPADTAVSELLGGPVKL 60

Query: 61  FTTRCILLELKARGRPLSNVLEASSKLFIARCNHERRVHGVTCIMDVIGKSNAEHFFVGT 120
           FTTRC++ EL+  G+  +  LEA+  L  A C HE       C+ +VIG  N EHFF+GT
Sbjct: 61  FTTRCVIAELEKLGKDFAESLEAAQTLNTATCEHEEAKTADECLSEVIGVQNTEHFFLGT 120

Query: 121 QDADLKKQLREIPGVPLIFGLRNTLFLEQPSALDHQFVKSLEEKRSHISEVEHNFLQKIT 180
           QDA+ +++L++   VPL+FGLRN L ++QPS    Q  K  E KR  +++ E   L K T
Sbjct: 121 QDAEFRRKLQQESIVPLVFGLRNILLIDQPSDFQRQSAKDSENKRLTMTDTEKKLLVKRT 180

Query: 181 KKILTQYEVEAEKTNENGDVGGDQNSEIQDLQKKKKRNLNDLKDRPQFKRKKAKGPNPLS 240
            KI+     EA   NE   +           +    +N   +KDRPQFKR +AKGPNPLS
Sbjct: 181 AKIIASNRKEATIANEEWGMP----------RVVSTKNGLGVKDRPQFKRNRAKGPNPLS 240

Query: 241 CLKKKK-------KVNPNQHPVSEKEEDGDNATKKRTRKRKRSRKT 280
           C+KKKK       K + N +   EK+E G + T+KR+RKR +  K+
Sbjct: 241 CMKKKKENPQSKSKADSNSNAQKEKKEGGSD-TQKRSRKRSKKGKS 275

[Close]

BLAST of Tan0013534 vs. TAIR 10
Match: AT2G46230.1 (PIN domain-like family protein )

HSP 1 Score: 49.3 bits (116), Expect = 6.1e-06
Identity = 30/117 (25.64%), Postives = 56/117 (47.86%), Query Frame = 0


Query: 25  PFKVFCDGTFVYHLLSNQLLPADDAIAKVLGGRVKLFTTRCILLELKARGRPLSNVLEAS 84
           P++V  D  F+   + N+ +  +  +   L        T C++ EL+  G+     L  +
Sbjct: 62  PYRVLVDTNFINFSIQNK-IDLEKGMRDCLYANCTPCITDCVMAELEKLGQKYRVALRIA 121

Query: 85  SKLFIAR--CNHERRVHGVTCIMDVIGKSNAEHFFVGTQDADLKKQLREIPGVPLIF 140
                 R  C H +  +   C++D + +     F V T D DLK+++R+IPGVP+++
Sbjct: 122 KDPHFERLPCIH-KGTYADDCLVDRVTQHKC--FIVATCDRDLKRRIRKIPGVPIMY 174

The following BLAST results are available for this feature:

BLAST of Tan0013534 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CX11	5.9e-30	33.57	rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=2 SV=...	[more]
Q9BRU9	1.1e-28	32.86	rRNA-processing protein UTP23 homolog OS=Homo sapiens OX=9606 GN=UTP23 PE=1 SV=2	[more]
Q08DU1	1.4e-28	32.14	rRNA-processing protein UTP23 homolog OS=Bos taurus OX=9913 GN=UTP23 PE=2 SV=1	[more]
O74862	1.6e-19	28.06	rRNA-processing protein utp23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
Q12339	1.1e-15	30.48	rRNA-processing protein UTP23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...	[more]

BLAST of Tan0013534 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601964.1	5.2e-108	75.52	Proline-rich receptor-like protein kinase PERK3, partial [Cucurbita argyrosperma...	[more]
XP_022990879.1	1.5e-107	75.52	rRNA-processing protein UTP23 homolog isoform X1 [Cucurbita maxima]	[more]
KAG7032659.1	2.6e-107	75.17	rRNA-processing protein UTP23-like protein [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022990880.1	2.6e-107	74.83	rRNA-processing protein UTP23 homolog isoform X2 [Cucurbita maxima]	[more]
XP_022923049.1	2.2e-106	75.61	rRNA-processing protein UTP23 homolog isoform X1 [Cucurbita moschata]	[more]

BLAST of Tan0013534 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JT87	7.3e-108	75.52	rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1JRB3	1.2e-107	74.83	rRNA-processing protein UTP23 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1E579	1.0e-106	75.61	rRNA-processing protein UTP23 homolog isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1E589	1.8e-106	74.91	rRNA-processing protein UTP23 homolog isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A1S3CNY6	6.4e-96	67.25	rRNA-processing protein UTP23 homolog OS=Cucumis melo OX=3656 GN=LOC103503039 PE...	[more]

BLAST of Tan0013534 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34570.1	8.6e-61	44.76	PIN domain-like family protein	[more]
AT2G46230.1	6.1e-06	25.64	PIN domain-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 205..225
None	No IPR available	GENE3D	3.40.50.1010		coord: 1..154 e-value: 9.1E-43 score: 147.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..228
None	No IPR available	PANTHER	PTHR12416	UNCHARACTERIZED	coord: 1..281
None	No IPR available	PANTHER	PTHR12416:SF3	RRNA-PROCESSING PROTEIN UTP23 HOMOLOG	coord: 1..281
None	No IPR available	CDD	cd08553	PIN_Fcf1-like	coord: 26..148 e-value: 1.72067E-47 score: 153.12
IPR006984	rRNA-processing protein Fcf1/Utp23	PFAM	PF04900	Fcf1	coord: 52..149 e-value: 5.6E-23 score: 81.1
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 25..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013534.1	Tan0013534.1	mRNA
Tan0013534.2	Tan0013534.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome