Tan0013463 (gene) Snake gourd v1

Overview


Name	Tan0013463
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	rRNA 2'-O-methyltransferase fibrillarin
Location	LG01: 1897788 .. 1901247 (-)
RNA-Seq Expression	Tan0013463
Synteny	Tan0013463

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTAAAACCCCAAACAAGAGCTCTTCACTTCGTCTTTGTGCTCTGCAGTTCTAAAACCCTAGCCGCAACTATCCTCCGGCGCTCGCTCTTTCGGTGACTGAAATGAGACCTCCTCGAGGTACAATCGTGAAACAAGCAGAGCTTGTACTCCTTTTGTTTTCGATTTCCTTGTTTTTGGATTTTGAAAATGCTCTGTTGAGTACGATGGAGACTAATGTTTGTAACGTAATGTATTGTTCGTCTGTTTGTTTCCGTTCTTACTACTTACTGAATCCACATCTATAAAATCTCGTTGATCGGTTGTTTGATTGTTGGCTCCAGCTATTCTACTTGCGTGTTTTATCACTTTGTATGGGTCATTAAATTGGAGTAAGTTGGATATGTGCAGGCCGCGGTGGTGGTGGTGGATTTAGGGGAAGGGGTGATGGAGGAAGGGGTGGTGGTAGAGGCCGAGGTGGTGGTGGTGGTAGAGGCGGCGGCGGAGGCAGAGGTATGCAAAGCCGCGGTGGTGGTCGCGGAGGTGGAAGAGGTCGCGGTGGAGGAAGAGGAGGTGGTATGAAAGGTGGAAGCAAAGTTGTCGTTGAACCCCACAGACACGAAGGTATTTTCATTGCCAAGGGTAAAGAAGATGCTCTTGTCACTAAGAACATGGTCTCTGGTGAATCTGTCTACAACGAGAAGAGAATATCCGTCCAGGTGATTCGCTTCTAGCAGTAATCCTGCCTTTTAATGCTTATGCCTAGATGTTTGTTAATTTTCAAGGTACACTTATTGTGGTTGAGGGAAACCATGCTGTTTTTGGAGAAGTTTGGTATGAGTTTTTTTTTTATTATTTAAATTATCCATGAGAAATTCTAGTTGACATTAGTATCTCCAAATAGTTTTGGCTGGTTCTGGCACGGTAGTTAGTGCTTGTAAAATATTTATCCTTAGTTAAGTGAATCGTCTATGCATGTTCTATTGTTATACCTTCAAAGCATTCCATTTTGCAAGTATTTGTGTTCGTAAACTGTCTGCATGGCTAATTGTTTGATGTACTACTGTCCTTCCAGAATGAAGATGGAACAAAAATAGAATACAGAGTTTGGAACCCATTCAGGTCTAAGTTGGCTGCTGCTGTTCTTGGTGGTGTTGATGACATATGGATCGTTAGTACTTTTCACCTCCAATTTGACGTCCTAATGTTTTATCTACTTAACTCTTTAGTTTGTCTTTTCTTTTAGTTATTTTTAACGTGTTAATGTATGTATTGTAGAAACCTGGTGCTCGAGTGTTGTATCTCGGTGCTGCTTCAGGAACAACTGTATCTCATGTCTCAGATGTTGTTGGCCCTGTAAGTAGTTATTTTGAGAGCATCTCTATTAAGTTTCATGAAGTAAAAAAGGTTTCTTAACATTTGTTGCTGCTTTGATTTGCAGACTGGTATAGTGTATGCCGTTGAATTCTCTCATAGGAGTGGTAGAGATTTAGTCAACATGGCAAAGAAGCGCACAAATGTTATACCAATCATTGAAGATGCTAGACACCCAGCCAAGTACCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCTCAGCCAGATCAGGTTCACACTTCTTTCTTTTTCTGATTTGTCTGTATTATTCTGGTATGTGAACACCACCATCTTAGCTGAAATTTAAAGGCACAGTTCTTTGATTTATAAATAGAATCTAACTGCTGTTGTATCTTATTTCCCTGCATTAACCCGTTCTTATTTCCCTGTTTCGGATGTAATATCACTCTTTCATCGTTTATTCTTAAAGCCATTTTCCCCTTAAATTGCTTAGCATATGATGAGTTGCTCGGATTCCCCTTCAAGACTTCTTGAATGATGCAAAACCCGAGTTTCTGATGCTTGAAAATACTTAATTTTGAATTGGTATTATCTTTTGTTTTTTTTAATTATACTGCTCGTCTGATACTATCAACTTCTTTTTTTCCAACGTCTTTCTTGGATTTGTTTTCCTTTTTCCATTGTTGGTCATTTTTTATATTTCAAATGAATGGTATCAAATCCATGAAAGTTTTTTTTAATATTCTGTTTTAAAAATATTTTTCATTTTCTATTACTCATGAAATATTTTTGTTATCATATTTAACCATTCATTGTCATTTTATTAGTTCTTTGATTTAAACCACATTGTTTTCTTAGCGTGCGTAGCGGTAATCTGAATTTGAATTTATGATTCCCGTGCAAGAAATAGTAATCACAATCACCTCTACATTTTGACATTTACACCACCCATCCCACCTCTTTTAGCTCTATTTATATTTGGATTCTGTCGGTAGTTTAGTTGCAAGCTATTCTGCTCAATCAATATATGGGATCTCTCTATGCATAATCTTTCTAATTTCCCCCCAATAATCTCTTACCAAAAAATATTTCTCCCCAATAATCGTTTTATTACTTGCAGTTCTTTTTTTTTAATGATATGCTCTAACTATGGATTAGTTTGGTTTTGGAGGTTTAGATTCTAGGCTCTTCTGTAGAGTTTAAAGAACTAAAGAAGAAAATAACGAGAATCTACTATATCTTATTTAGATCATCTTTGTTTGGATAATGAGATATAATGGGGACTGTGCCACAAATCTTTAGCCCTCTCATCCATTTCAATACAGATTTATCTTCACTTAATAATTTGATTCTTACGTCCGGTTATCCTGCAGGTATATTTGCTATTGAACATAGTGCTATGCATCTTATCACATTTTTATCTTTTAGGCTCTTCCTCTTTGCTAAGCATGTGATGAATTACTCGGATTCCCCTTCAAGACATCTTGAATGATGCACAACCCGAGTTTCTGATGCGTCCAAGAATATCCCATTTTTATTAAACCTTCCATCAGTTAGCCATTTTTGCATTCTTGCTCTGCCAATTTTTTAAACCTATGAACTTGTCTGCATCTTACATCGACCTCTCTTAACTTCCTTTTTCAACGCAGGCAAGAATTTTGGCACTTAATGCATCATATTTTCTCAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGTGAGTGTATGGTTTCCATTTTGTTAAAGATGAAAGACCGTGCATAATCCATGAATAGAATTTGATATATTTCATATTGAACTTTGTAGGCCAACTGTATCGACTCGACTGTCCCAGCAGAGGCAGTGTTTGCAAGTGAAGTGAATAAGCTAAAGGCAGACCAATTCAAACCCACCGAGCAAGTGACTCTCGAACCATTCGAGCGAGACCATGCTTGTGTTGTTGGTATCTATCGTGCGCTGAAGAAACAGAAGCCCGCTGCTTAGACAGTTGAACGAACAGCAGGATTTGGATTCTTATGGATGATTTATAGATAGTTCACAGCTGTAGCTTATCCATGTTTCTTATTTTGCTAGCTTGTAGCCGAGATCATCTTGAAAACCAATATGCGAGTGAACCTTTTTTTTTTTTTTT

mRNA sequence

AAATTTAAAACCCCAAACAAGAGCTCTTCACTTCGTCTTTGTGCTCTGCAGTTCTAAAACCCTAGCCGCAACTATCCTCCGGCGCTCGCTCTTTCGGTGACTGAAATGAGACCTCCTCGAGGCCGCGGTGGTGGTGGTGGATTTAGGGGAAGGGGTGATGGAGGAAGGGGTGGTGGTAGAGGCCGAGGTGGTGGTGGTGGTAGAGGCGGCGGCGGAGGCAGAGGTATGCAAAGCCGCGGTGGTGGTCGCGGAGGTGGAAGAGGTCGCGGTGGAGGAAGAGGAGGTGGTATGAAAGGTGGAAGCAAAGTTGTCGTTGAACCCCACAGACACGAAGGTATTTTCATTGCCAAGGGTAAAGAAGATGCTCTTGTCACTAAGAACATGGTCTCTGGTGAATCTGTCTACAACGAGAAGAGAATATCCGTCCAGAATGAAGATGGAACAAAAATAGAATACAGAGTTTGGAACCCATTCAGGTCTAAGTTGGCTGCTGCTGTTCTTGGTGGTGTTGATGACATATGGATCAAACCTGGTGCTCGAGTGTTGTATCTCGGTGCTGCTTCAGGAACAACTGTATCTCATGTCTCAGATGTTGTTGGCCCTACTGGTATAGTGTATGCCGTTGAATTCTCTCATAGGAGTGGTAGAGATTTAGTCAACATGGCAAAGAAGCGCACAAATGTTATACCAATCATTGAAGATGCTAGACACCCAGCCAAGTACCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCTCAGCCAGATCAGGCAAGAATTTTGGCACTTAATGCATCATATTTTCTCAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGTATCGACTCGACTGTCCCAGCAGAGGCAGTGTTTGCAAGTGAAGTGAATAAGCTAAAGGCAGACCAATTCAAACCCACCGAGCAAGTGACTCTCGAACCATTCGAGCGAGACCATGCTTGTGTTGTTGGTATCTATCGTGCGCTGAAGAAACAGAAGCCCGCTGCTTAGACAGTTGAACGAACAGCAGGATTTGGATTCTTATGGATGATTTATAGATAGTTCACAGCTGTAGCTTATCCATGTTTCTTATTTTGCTAGCTTGTAGCCGAGATCATCTTGAAAACCAATATGCGAGTGAACCTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGAGACCTCCTCGAGGCCGCGGTGGTGGTGGTGGATTTAGGGGAAGGGGTGATGGAGGAAGGGGTGGTGGTAGAGGCCGAGGTGGTGGTGGTGGTAGAGGCGGCGGCGGAGGCAGAGGTATGCAAAGCCGCGGTGGTGGTCGCGGAGGTGGAAGAGGTCGCGGTGGAGGAAGAGGAGGTGGTATGAAAGGTGGAAGCAAAGTTGTCGTTGAACCCCACAGACACGAAGGTATTTTCATTGCCAAGGGTAAAGAAGATGCTCTTGTCACTAAGAACATGGTCTCTGGTGAATCTGTCTACAACGAGAAGAGAATATCCGTCCAGAATGAAGATGGAACAAAAATAGAATACAGAGTTTGGAACCCATTCAGGTCTAAGTTGGCTGCTGCTGTTCTTGGTGGTGTTGATGACATATGGATCAAACCTGGTGCTCGAGTGTTGTATCTCGGTGCTGCTTCAGGAACAACTGTATCTCATGTCTCAGATGTTGTTGGCCCTACTGGTATAGTGTATGCCGTTGAATTCTCTCATAGGAGTGGTAGAGATTTAGTCAACATGGCAAAGAAGCGCACAAATGTTATACCAATCATTGAAGATGCTAGACACCCAGCCAAGTACCGAATGTTGGTTGGTATGGTGGATGTGATATTTTCAGATGTTGCTCAGCCAGATCAGGCAAGAATTTTGGCACTTAATGCATCATATTTTCTCAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGTATCGACTCGACTGTCCCAGCAGAGGCAGTGTTTGCAAGTGAAGTGAATAAGCTAAAGGCAGACCAATTCAAACCCACCGAGCAAGTGACTCTCGAACCATTCGAGCGAGACCATGCTTGTGTTGTTGGTATCTATCGTGCGCTGAAGAAACAGAAGCCCGCTGCTTAG

Protein sequence

MRPPRGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALKKQKPAA

Homology

[Close]

BLAST of Tan0013463 vs. ExPASy Swiss-Prot
Match: Q94AH9 (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB2 PE=1 SV=2)

HSP 1 Score: 443.7 bits (1140), Expect = 1.6e-123
Identity = 260/317 (82.02%), Postives = 272/317 (85.80%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGG-GGGRGG---GGGRGMQSRGG-GRGGGRGRG 60
           MRPP    GGG   GRG GG  GGRG GG  GGRGG   GGGRG   RGG GRG G  RG
Sbjct: 1   MRPPLTGSGGGFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDRGGRGRGRGPPRG 60

Query: 61  GGRG-------GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQ 120
           G RG       GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQ
Sbjct: 61  GARGGRGPAGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQ 120

Query: 121 NEDGTKIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTG 180
           NEDGTK EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G
Sbjct: 121 NEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEG 180

Query: 181 IVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240
            VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI
Sbjct: 181 CVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240

Query: 241 LALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERD 300
           LALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFERD
Sbjct: 241 LALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERD 300

Query: 301 HACVVGIYRALKKQKPA 306
           HACVVG YR  KK K A
Sbjct: 301 HACVVGGYRMPKKPKAA 317

[Close]

BLAST of Tan0013463 vs. ExPASy Swiss-Prot
Match: Q9FEF8 (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 1.8e-122
Identity = 256/308 (83.12%), Postives = 268/308 (87.01%), Query Frame = 0


Query: 1   MRPP--RGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGR 60
           MRPP   GRGGGG   GR  GGRG G GR  GGGR G  GR    RG GRG  RGRGG  
Sbjct: 1   MRPPVTGGRGGGGFRGGRDGGGRGFGGGRSFGGGRSGDRGRS-GPRGRGRGAPRGRGGPP 60

Query: 61  GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYR 120
            GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTK+EYR
Sbjct: 61  RGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYR 120

Query: 121 VWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHR 180
           VWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEFSHR
Sbjct: 121 VWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHR 180

Query: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLK 240
           SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+FLK
Sbjct: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASFFLK 240

Query: 241 AGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA 300
            GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG YR 
Sbjct: 241 TGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGGYRM 300

Query: 301 LKKQKPAA 307
            KKQK  A
Sbjct: 301 PKKQKTPA 307

[Close]

BLAST of Tan0013463 vs. ExPASy Swiss-Prot
Match: Q8I1F4 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 6.7e-109
Identity = 227/297 (76.43%), Postives = 251/297 (84.51%), Query Frame = 0


Query: 6   GRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGG 65
           GRGG GG RG G  G GGG GRGG GGRGGGGGRG   RGGG  GG GRGGG  GG KGG
Sbjct: 51  GRGGFGGGRGGGGRGGGGGGGRGGFGGRGGGGGRGGGGRGGGGRGGGGRGGG-AGGFKGG 110

Query: 66  SKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVWNPFRS 125
             V +EPHRHEG+FIA+GKEDALVT+N V G  VY EKRISV+N +G KIEYRVWNPFRS
Sbjct: 111 KTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVEN-NGEKIEYRVWNPFRS 170

Query: 126 KLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVN 185
           KLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSDVVGP G+VYAVEFSHRSGRDL+N
Sbjct: 171 KLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLIN 230

Query: 186 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 245
           +AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +FLK GGHFVI
Sbjct: 231 VAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVI 290

Query: 246 SIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALKKQ 303
           SIKA+CIDST   EAVFASEV K++AD+ KP EQ+TLEP+ERDHA VVG+YR   KQ
Sbjct: 291 SIKASCIDSTAQPEAVFASEVKKMQADKLKPQEQLTLEPYERDHAVVVGVYRPPPKQ 345

[Close]

BLAST of Tan0013463 vs. ExPASy Swiss-Prot
Match: Q9W1V3 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fib PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.7e-107
Identity = 224/297 (75.42%), Postives = 249/297 (83.84%), Query Frame = 0


Query: 6   GRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGGGMKGG 65
           GRGG GG RG G  G GGG GRG  GGRGGGGGRG   RGGG  GG GRGGG  GG KGG
Sbjct: 50  GRGGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRGGG-AGGFKGG 109

Query: 66  SKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVWNPFRS 125
             V +EPHRHEG+FIA+GKEDALVT+N V G  VY EKRISV+  +G KIEYRVWNPFRS
Sbjct: 110 KTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVET-NGEKIEYRVWNPFRS 169

Query: 126 KLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVN 185
           KLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSDVVGP G+VYAVEFSHRSGRDL+N
Sbjct: 170 KLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLIN 229

Query: 186 MAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVI 245
           +AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +FLK GGHFVI
Sbjct: 230 VAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVI 289

Query: 246 SIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALKKQ 303
           SIKA+CIDST   EAVFA+EV K++AD+ KP EQ+TLEP+ERDHA VVG+YR   KQ
Sbjct: 290 SIKASCIDSTAQPEAVFAAEVKKMQADKLKPQEQLTLEPYERDHAVVVGVYRPPPKQ 344

[Close]

BLAST of Tan0013463 vs. ExPASy Swiss-Prot
Match: P22509 (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2)

HSP 1 Score: 384.0 bits (985), Expect = 1.6e-105
Identity = 225/304 (74.01%), Postives = 251/304 (82.57%), Query Frame = 0


Query: 6   GRGGGGGFRGRGDGGRGGGRGRGGGG----GRGGGGGRGMQSRGGGRGGGRGRGGGRGG- 65
           GRGG GGF G   G  GGGRGRGGGG    GRGGGGGRG    G   GGGRGRGGGRGG 
Sbjct: 27  GRGGRGGFGGGRGGFGGGGRGRGGGGGGFRGRGGGGGRG---GGFQSGGGRGRGGGRGGK 86

Query: 66  -GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRV 125
            G + G  V+VEPHRHEG+FI +GKEDALVTKN+V GESVY EKR+S+ +E   KIEYR 
Sbjct: 87  RGNQSGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSI-SEGDDKIEYRA 146

Query: 126 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 185
           WNPFRSKLAAA+LGGVD I IKPGA+VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRS
Sbjct: 147 WNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRS 206

Query: 186 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 245
           GRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+DVAQPDQ RI+ALNA  FL+ 
Sbjct: 207 GRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRN 266

Query: 246 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAL 304
           GGHFVISIKANCIDST  AEAVFASEV K++ +  KP EQ+TLEP+ERDHA VVG+YR  
Sbjct: 267 GGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVYRPP 326

[Close]

BLAST of Tan0013463 vs. NCBI nr
Match: XP_022141240.1 (mediator of RNA polymerase II transcription subunit 36a-like [Momordica charantia])

HSP 1 Score: 550.1 bits (1416), Expect = 1.2e-152
Identity = 301/306 (98.37%), Postives = 303/306 (99.02%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60
           MRPPRGRGGGGGFRGRGDGGR GGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGR-GGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120
           GMKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVW
Sbjct: 61  GMKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA K
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKPAA 307
           KQKPAA
Sbjct: 301 KQKPAA 305

[Close]

BLAST of Tan0013463 vs. NCBI nr
Match: XP_008439295.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis melo])

HSP 1 Score: 548.9 bits (1413), Expect = 2.8e-152
Identity = 302/306 (98.69%), Postives = 303/306 (99.02%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60
           MRPPRGRGGGGGFRGRGDGGR GGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGR-GGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTKIEYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA K
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKPAA 307
           KQK AA
Sbjct: 301 KQKAAA 305

[Close]

BLAST of Tan0013463 vs. NCBI nr
Match: XP_023552409.1 (mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 547.4 bits (1409), Expect = 8.1e-152
Identity = 301/306 (98.37%), Postives = 302/306 (98.69%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60
           MRPPRGRGGGGGFRGRGDGGR GGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGR-GGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA K
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKPAA 307
           KQK AA
Sbjct: 301 KQKAAA 305

[Close]

BLAST of Tan0013463 vs. NCBI nr
Match: XP_022945875.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita moschata] >XP_022968445.1 probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxima] >KAG6574193.1 rRNA 2'-O-methyltransferase fibrillarin 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 545.8 bits (1405), Expect = 2.4e-151
Identity = 301/306 (98.37%), Postives = 302/306 (98.69%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60
           MRPPRGRGGGGGFRGRGDGGR GGRGRGGGGGRG GGGRGM SRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGR-GGRGRGGGGGRGFGGGRGMASRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP+GIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA K
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKPAA 307
           KQKPAA
Sbjct: 301 KQKPAA 305

[Close]

BLAST of Tan0013463 vs. NCBI nr
Match: XP_022984980.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxima] >KAG7014755.1 Mediator of RNA polymerase II transcription subunit 36a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 542.7 bits (1397), Expect = 2.0e-150
Identity = 301/306 (98.37%), Postives = 302/306 (98.69%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60
           MRPPRGRGGGGGFRGRGDGGR GGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGR-GGRGRGGGGGRGGGGGRGM-SRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA K
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKPAA 307
           KQK AA
Sbjct: 301 KQKAAA 304

[Close]

BLAST of Tan0013463 vs. ExPASy TrEMBL
Match: A0A6J1CHH3 (mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charantia OX=3673 GN=LOC111011688 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 6.0e-153
Identity = 301/306 (98.37%), Postives = 303/306 (99.02%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60
           MRPPRGRGGGGGFRGRGDGGR GGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGR-GGRGRGGGGGRGGGGGRGMASRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120
           GMKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVW
Sbjct: 61  GMKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA K
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKPAA 307
           KQKPAA
Sbjct: 301 KQKPAA 305

[Close]

BLAST of Tan0013463 vs. ExPASy TrEMBL
Match: A0A1S3AY25 (mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=3656 GN=LOC103484122 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.3e-152
Identity = 302/306 (98.69%), Postives = 303/306 (99.02%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60
           MRPPRGRGGGGGFRGRGDGGR GGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGR-GGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV+GESVYNEKRISVQNEDGTKIEYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA K
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKPAA 307
           KQK AA
Sbjct: 301 KQKAAA 305

[Close]

BLAST of Tan0013463 vs. ExPASy TrEMBL
Match: A0A6J1HX74 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111467690 PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.1e-151
Identity = 301/306 (98.37%), Postives = 302/306 (98.69%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60
           MRPPRGRGGGGGFRGRGDGGR GGRGRGGGGGRG GGGRGM SRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGR-GGRGRGGGGGRGFGGGRGMASRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP+GIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA K
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKPAA 307
           KQKPAA
Sbjct: 301 KQKPAA 305

[Close]

BLAST of Tan0013463 vs. ExPASy TrEMBL
Match: A0A6J1G280 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita moschata OX=3662 GN=LOC111449984 PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 1.1e-151
Identity = 301/306 (98.37%), Postives = 302/306 (98.69%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60
           MRPPRGRGGGGGFRGRGDGGR GGRGRGGGGGRG GGGRGM SRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGR-GGRGRGGGGGRGFGGGRGMASRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGP+GIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA K
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKPAA 307
           KQKPAA
Sbjct: 301 KQKPAA 305

[Close]

BLAST of Tan0013463 vs. ExPASy TrEMBL
Match: A0A6J1JA27 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111483086 PE=3 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 9.6e-151
Identity = 301/306 (98.37%), Postives = 302/306 (98.69%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRGG 60
           MRPPRGRGGGGGFRGRGDGGR GGRGRGGGGGRGGGGGRGM SRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGRGGGGGFRGRGDGGR-GGRGRGGGGGRGGGGGRGM-SRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTK+EYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA K
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKPAA 307
           KQK AA
Sbjct: 301 KQKAAA 304

[Close]

BLAST of Tan0013463 vs. TAIR 10
Match: AT4G25630.1 (fibrillarin 2 )

HSP 1 Score: 443.7 bits (1140), Expect = 1.2e-124
Identity = 260/317 (82.02%), Postives = 272/317 (85.80%), Query Frame = 0


Query: 1   MRPPRGRGGGGGFRGRGDGGRGGGRGRGG-GGGRGG---GGGRGMQSRGG-GRGGGRGRG 60
           MRPP    GGG   GRG GG  GGRG GG  GGRGG   GGGRG   RGG GRG G  RG
Sbjct: 1   MRPPLTGSGGGFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDRGGRGRGRGPPRG 60

Query: 61  GGRG-------GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQ 120
           G RG       GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQ
Sbjct: 61  GARGGRGPAGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQ 120

Query: 121 NEDGTKIEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTG 180
           NEDGTK EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G
Sbjct: 121 NEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEG 180

Query: 181 IVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240
            VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI
Sbjct: 181 CVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240

Query: 241 LALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERD 300
           LALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFERD
Sbjct: 241 LALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERD 300

Query: 301 HACVVGIYRALKKQKPA 306
           HACVVG YR  KK K A
Sbjct: 301 HACVVGGYRMPKKPKAA 317

[Close]

BLAST of Tan0013463 vs. TAIR 10
Match: AT5G52470.1 (fibrillarin 1 )

HSP 1 Score: 440.3 bits (1131), Expect = 1.3e-123
Identity = 256/308 (83.12%), Postives = 268/308 (87.01%), Query Frame = 0


Query: 1   MRPP--RGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGR 60
           MRPP   GRGGGG   GR  GGRG G GR  GGGR G  GR    RG GRG  RGRGG  
Sbjct: 1   MRPPVTGGRGGGGFRGGRDGGGRGFGGGRSFGGGRSGDRGRS-GPRGRGRGAPRGRGGPP 60

Query: 61  GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYR 120
            GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTK+EYR
Sbjct: 61  RGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYR 120

Query: 121 VWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHR 180
           VWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEFSHR
Sbjct: 121 VWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHR 180

Query: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLK 240
           SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+FLK
Sbjct: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASFFLK 240

Query: 241 AGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA 300
            GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG YR 
Sbjct: 241 TGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGGYRM 300

Query: 301 LKKQKPAA 307
            KKQK  A
Sbjct: 301 PKKQKTPA 307

[Close]

BLAST of Tan0013463 vs. TAIR 10
Match: AT5G52490.1 (Fibrillarin family protein )

HSP 1 Score: 338.2 bits (866), Expect = 6.9e-93
Identity = 195/287 (67.94%), Postives = 225/287 (78.40%), Query Frame = 0


Query: 25  RGRGGG--GGRG-GGGGRGMQSRGGGRGG--GRGRGGGR-----GGGMKGGSKVVVEPHR 84
           RGRGGG  GGRG   GG G   RG GRGG  GRGRG GR      GG+KGGSKV+V PHR
Sbjct: 6   RGRGGGVRGGRGLARGGEGSAVRGSGRGGESGRGRGPGRVKSESDGGIKGGSKVLVTPHR 65

Query: 85  HEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYRVWNPFRSKLAAAVLGG 144
           H G+F+AK K DALVTKN+V GE +YNEKRI VQNED + +EYRVWNP RSKLA A+  G
Sbjct: 66  HAGVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRSTVEYRVWNPHRSKLADAITTG 125

Query: 145 VDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNMAKKRTNVI 204
           VD+IWIKPG +VLYLGA+SG TVSHVSD+VGP G VYAVE S   G+ L+NMA+KRTNVI
Sbjct: 126 VDNIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDICGKVLMNMAEKRTNVI 185

Query: 205 PIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDS 264
           PIIEDARHPAKYRMLVGMVD+IFSDV  P+QA IL+LNASYFLK+GGHF+ISIKAN IDS
Sbjct: 186 PIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNASYFLKSGGHFMISIKANSIDS 245

Query: 265 TVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRALKK 302
           T+ AE V+  EV KL+ ++ +PTE + L+  E  HACV G YR  +K
Sbjct: 246 TIAAETVYQMEVEKLQMEELRPTEILHLDSCEEKHACVFGGYRLPRK 292

[Close]

BLAST of Tan0013463 vs. TAIR 10
Match: AT5G52470.2 (fibrillarin 1 )

HSP 1 Score: 312.4 bits (799), Expect = 4.1e-85
Identity = 189/227 (83.26%), Postives = 198/227 (87.22%), Query Frame = 0


Query: 1   MRPP--RGRGGGGGFRGRGDGGRGGGRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGR 60
           MRPP   GRGGGG   GR  GGRG G GR  GGGR G  GR    RG GRG  RGRGG  
Sbjct: 1   MRPPVTGGRGGGGFRGGRDGGGRGFGGGRSFGGGRSGDRGRS-GPRGRGRGAPRGRGGPP 60

Query: 61  GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKIEYR 120
            GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRISVQNEDGTK+EYR
Sbjct: 61  RGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYR 120

Query: 121 VWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHR 180
           VWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEFSHR
Sbjct: 121 VWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHR 180

Query: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 226
           SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
Sbjct: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 226

The following BLAST results are available for this feature:

BLAST of Tan0013463 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AH9	1.6e-123	82.02	rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q9FEF8	1.8e-122	83.12	rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q8I1F4	6.7e-109	76.43	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3...	[more]
Q9W1V3	3.7e-107	75.42	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fi...	[more]
P22509	1.6e-105	74.01	rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=...	[more]

BLAST of Tan0013463 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141240.1	1.2e-152	98.37	mediator of RNA polymerase II transcription subunit 36a-like [Momordica charanti...	[more]
XP_008439295.1	2.8e-152	98.69	PREDICTED: mediator of RNA polymerase II transcription subunit 36a-like [Cucumis...	[more]
XP_023552409.1	8.1e-152	98.37	mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo sub...	[more]
XP_022945875.1	2.4e-151	98.37	probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita mosc...	[more]
XP_022984980.1	2.0e-150	98.37	probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxi...	[more]

BLAST of Tan0013463 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHH3	6.0e-153	98.37	mediator of RNA polymerase II transcription subunit 36a-like OS=Momordica charan...	[more]
A0A1S3AY25	1.3e-152	98.69	mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=...	[more]
A0A6J1HX74	1.1e-151	98.37	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]
A0A6J1G280	1.1e-151	98.37	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita mo...	[more]
A0A6J1JA27	9.6e-151	98.37	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]

BLAST of Tan0013463 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25630.1	1.2e-124	82.02	fibrillarin 2	[more]
AT5G52470.1	1.3e-123	83.12	fibrillarin 1	[more]
AT5G52490.1	6.9e-93	67.94	Fibrillarin family protein	[more]
AT5G52470.2	4.1e-85	83.26	fibrillarin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000692	Fibrillarin	PRINTS	PR00052	FIBRILLARIN	coord: 116..135 score: 75.71 coord: 168..185 score: 72.22 coord: 143..164 score: 79.22 coord: 193..222 score: 70.24 coord: 223..252 score: 67.62 coord: 275..296 score: 61.36 coord: 88..107 score: 64.29
IPR000692	Fibrillarin	SMART	SM01206	Fibrillarin_2	coord: 70..298 e-value: 6.6E-173 score: 590.4
IPR000692	Fibrillarin	PIRSF	PIRSF006540	Nop17p	coord: 19..300 e-value: 3.5E-121 score: 401.2
IPR000692	Fibrillarin	PFAM	PF01269	Fibrillarin	coord: 70..297 e-value: 9.7E-110 score: 365.0
IPR000692	Fibrillarin	HAMAP	MF_00351	RNA_methyltransf_FlpA	coord: 84..297 score: 36.932789
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 65..120 e-value: 1.9E-29 score: 103.3
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 121..298 e-value: 1.6E-88 score: 296.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	PANTHER	PTHR10335	RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN	coord: 4..305
None	No IPR available	PANTHER	PTHR10335:SF22	FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED	coord: 4..305
IPR020813	Fibrillarin, conserved site	PROSITE	PS00566	FIBRILLARIN	coord: 168..182
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 68..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013463.1	Tan0013463.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000494	box C/D RNA 3'-end processing
biological_process	GO:1990258	histone glutamine methylation
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0051225	spindle assembly
biological_process	GO:0006364	rRNA processing
biological_process	GO:0031122	cytoplasmic microtubule organization
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000922	spindle pole
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0000930	gamma-tubulin complex
cellular_component	GO:0005874	microtubule
cellular_component	GO:0000923	equatorial microtubule organizing center
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0031428	box C/D RNP complex
molecular_function	GO:0043015	gamma-tubulin binding
molecular_function	GO:1990259	histone-glutamine methyltransferase activity
molecular_function	GO:0051011	microtubule minus-end binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008649	rRNA methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity