Tan0013459 (gene) Snake gourd v1

Overview


Name	Tan0013459
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	25.3 kDa vesicle transport protein
Location	LG01: 2199664 .. 2201722 (+)
RNA-Seq Expression	Tan0013459
Synteny	Tan0013459

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAATTAAGATTAGAGATTTTTATTGAGGAGAGAAATGGTGAAGCTGACAATGGTGGGAAGGGTTAGGGATGGGCTTCCACTTGCACAAGGAATTAGGTATGTAAATGAAGAGCTCAATGATGATGTTTTAGGCTACAAACAACAAGCTGAATTCATACTCAAAGAGATCTCTAGAGGAGCTTTGTCACCTTCAAAAATGGCCATTCAGATAATGCATCATCACTCTTTCATGTATAACACCCACCTTTCTCTTTTTCCTTCAATCAATTGGTTTTTCATATTTAGGTAAATATGATTCATGAATCTCACCCATACAAAAAAAATAATTGCAAAACTCGTTCTAAACTACTAGAGATTGTTTGAGGCACACTAAGTGGGTTATTATAGTCTGAAATCATATAATATTATTTATATTGTAGAGTTGTTTAGTATGAAGTTATACTAGTTTGTGTTTGTTTAGGGTATAGAGTACTCCACAAATTATTATAACAAGTTACACTAAATTAATTAGACTTATTAAAGTCAAACTTTTTTTTTTTGCATTAATAATTAGTTACTTGGTGGAGAATGGTGTCTGCTACATGACATTGTGCGATTCTTCATACCCAAGAAAGCTGGCTCTCCATTACTTACAACATCTGCAAAAGGAGTTTTCAAAGTTTGATGATGCCCTAATAAATAAGCTTATCAAACCCTATAGTTTTCGCATTTTTGGTAAACTTTCAAAACCCTCTTCATACATTTTTAGTTTCTTTCCAAATGTGTAGAACAAGAAACAAAAAAAAAAAAGAAAAAAGGTATATAATTTCCTTTTTCTTAAAAGGAAAAATTTGATCCATGCCTGCCCAATACCTAGTGAAAAGAAAAGAATATATCAACTTTGTAATATCTTAGAAAATTTGTTATAAATATGTTTCTCTTATATATTCTCATTTCTATCCTACTTTACCTCCTAACAAAGAAAAGTAAAAAGCTTGGTTGGTATTATAATTCGATTAATGAAGTTTAGTTAGTTTAAAGTATCTCTATTTATATTTTTCAAATTATGATCAATTTGGATATTGGAATTTTTATTGAGTTTGGTCTGTGTAGATAGTATTATTAGCAATATTAGGAAACAATACATTGATACAAGAACACAGGCCAATCTATATAAGCTTAATGCAAATCGTCGCCAAACTGATCCAGACATGGTCACTTGTTCGCTCTATGAGATTTTAGAGAGAAGGAGAATAATGGGTAAGTATTCCTAGTTTTCATTTTTGGTTTTTGTGAATCAAATGATTTATTTTGATCCCAAAGTTAAGTCATTCATAAACAACTTAGATTATTTTTTTATTACTAAGGTCCCGTTTCATAACCATTTTATTTTTAGTTTTTAGTTTTTGAATTTAAACCTAAAAATACTACATATATCAATGAGTTTATATGTCTTCTTATCTATCTTAACCTATGTTTTCAAAAACGAGCAAACTTTTGAAAACTAAAAAGTAGCTTTCAAAAACTTGATTTTGTTTTTAAAATTTGGTTAAGAGTTCAAATGTTTACTTAAGGGAGTTGATCTCTATTGTAGAGAAATTAGGTGAACATAAGCTTAACTTTCAAAAACTAAAAACAAAAAATAAAATGGTTATCAAACGGAGTCTAATTAATTTAATTAAGCTTCTCTTATACCAATTTCAGATCATAAGGTGGAAAGATCAATCTCTAATACAAATTCCCAACCTGTCTCTTCTTCCATTTGGGGCTCTCCCTTTCTCAAGGTAATTTCAGAATCTCCAGATAATTAATTGGATCATTCAGGTTGAAATTGTTTCATTTTCTTTTATTTTCTTTCACTTTCTTGCCAACCAAACAATGAATAATTAGCATTTATTTATTTGGTTTTGAATTTATTTTTCTGTTGTCAGGAAATTGCTCTTAAATGGATGCCAATGGTTGCAACTTTTGCTCTAGTGTTTGTGCTTCTATGGGCTTCCTTTGTTCTCTTCGACATCTCATTATCTCATCATAATGAATTTGTAATTCTATATAACAACAGAAAATTGTTTCAGTAA

mRNA sequence

AGTAATTAAGATTAGAGATTTTTATTGAGGAGAGAAATGGTGAAGCTGACAATGGTGGGAAGGGTTAGGGATGGGCTTCCACTTGCACAAGGAATTAGGTATGTAAATGAAGAGCTCAATGATGATGTTTTAGGCTACAAACAACAAGCTGAATTCATACTCAAAGAGATCTCTAGAGGAGCTTTGTCACCTTCAAAAATGGCCATTCAGATAATGCATCATCACTCTTTCATTTACTTGGTGGAGAATGGTGTCTGCTACATGACATTGTGCGATTCTTCATACCCAAGAAAGCTGGCTCTCCATTACTTACAACATCTGCAAAAGGAGTTTTCAAAGTTTGATGATGCCCTAATAAATAAGCTTATCAAACCCTATAGTTTTCGCATTTTTGATAGTATTATTAGCAATATTAGGAAACAATACATTGATACAAGAACACAGGCCAATCTATATAAGCTTAATGCAAATCGTCGCCAAACTGATCCAGACATGGTCACTTGTTCGCTCTATGAGATTTTAGAGAGAAGGAGAATAATGGATCATAAGGTGGAAAGATCAATCTCTAATACAAATTCCCAACCTGTCTCTTCTTCCATTTGGGGCTCTCCCTTTCTCAAGGAAATTGCTCTTAAATGGATGCCAATGGTTGCAACTTTTGCTCTAGTGTTTGTGCTTCTATGGGCTTCCTTTGTTCTCTTCGACATCTCATTATCTCATCATAATGAATTTGTAATTCTATATAACAACAGAAAATTGTTTCAGTAA

Coding sequence (CDS)

ATGGTGAAGCTGACAATGGTGGGAAGGGTTAGGGATGGGCTTCCACTTGCACAAGGAATTAGGTATGTAAATGAAGAGCTCAATGATGATGTTTTAGGCTACAAACAACAAGCTGAATTCATACTCAAAGAGATCTCTAGAGGAGCTTTGTCACCTTCAAAAATGGCCATTCAGATAATGCATCATCACTCTTTCATTTACTTGGTGGAGAATGGTGTCTGCTACATGACATTGTGCGATTCTTCATACCCAAGAAAGCTGGCTCTCCATTACTTACAACATCTGCAAAAGGAGTTTTCAAAGTTTGATGATGCCCTAATAAATAAGCTTATCAAACCCTATAGTTTTCGCATTTTTGATAGTATTATTAGCAATATTAGGAAACAATACATTGATACAAGAACACAGGCCAATCTATATAAGCTTAATGCAAATCGTCGCCAAACTGATCCAGACATGGTCACTTGTTCGCTCTATGAGATTTTAGAGAGAAGGAGAATAATGGATCATAAGGTGGAAAGATCAATCTCTAATACAAATTCCCAACCTGTCTCTTCTTCCATTTGGGGCTCTCCCTTTCTCAAGGAAATTGCTCTTAAATGGATGCCAATGGTTGCAACTTTTGCTCTAGTGTTTGTGCTTCTATGGGCTTCCTTTGTTCTCTTCGACATCTCATTATCTCATCATAATGAATTTGTAATTCTATATAACAACAGAAAATTGTTTCAGTAA

Protein sequence

MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIMHHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFDSIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSISNTNSQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLWASFVLFDISLSHHNEFVILYNNRKLFQ

Homology

[Close]

BLAST of Tan0013459 vs. ExPASy Swiss-Prot
Match: Q94AU2 (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.8e-30
Identity = 77/216 (35.65%), Postives = 122/216 (56.48%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVK+T++ RV DGLPLA+G+    +  + D+  YKQQ + + K +SRG    S+M+++  
Sbjct: 1   MVKMTLIARVTDGLPLAEGLDDGRDLPDSDM--YKQQVKALFKNLSRGQNDASRMSVE-T 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
             + F Y++E  VCY+T+CD SYP+KLA  YL+ L+ EF + +   I    +PY+F  FD
Sbjct: 61  GPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSISNTN 180
           + I   +K Y DTRTQ N+ KLN    +    ++T ++ E+L     +D   E S   T+
Sbjct: 121 TFIQKTKKLYQDTRTQRNIAKLNDELYEVH-QIMTRNVQEVLGVGEKLDQVSEMSSRLTS 180

Query: 181 SQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLW 217
              + +        + +  KW P+   F +VF+L W
Sbjct: 181 ESRIYADKAKDLNRQALIRKWAPVAIVFGVVFLLFW 212

[Close]

BLAST of Tan0013459 vs. ExPASy Swiss-Prot
Match: Q7SXP0 (Vesicle-trafficking protein SEC22b-B OS=Danio rerio OX=7955 GN=sec22bb PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.9e-22
Identity = 62/181 (34.25%), Postives = 107/181 (59.12%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MV LTM+ R+ DGLPLA  ++  +E++  D+  Y+ QA+ + ++++    SP++  ++  
Sbjct: 1   MVLLTMIARLADGLPLAASMQ-EDEQMGRDLQQYQSQAKQLFRKLNE--QSPNRCTLE-A 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
              SF Y++E GVCY+ LC++ +P+KLA  YL+ LQ EF +     +  + +PYSF  FD
Sbjct: 61  GSMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSISNTN 180
           + I   +K YID+R + NL  +N   +     MV  ++ E+L+R   +   ++   SN +
Sbjct: 121 TYIQKTKKSYIDSRARRNLSNINTELQDVQRIMV-ANIEEVLQRGEALS-ALDSKASNLS 175

Query: 181 S 182
           S
Sbjct: 181 S 175

[Close]

BLAST of Tan0013459 vs. ExPASy Swiss-Prot
Match: Q5ZJW4 (Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.5e-22
Identity = 59/164 (35.98%), Postives = 100/164 (60.98%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MV LTM+ RV DGLPLA  ++  +E+   D+  Y+ QA+ + ++++    SP++  ++  
Sbjct: 1   MVLLTMIARVADGLPLAASMQ-EDEQSGRDLQQYQSQAKQLFRKLNE--QSPTRCTLE-A 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
              +F Y++E GVCY+ LC++++P+KLA  YL+ LQ EF +     +  + +PYSF  FD
Sbjct: 61  GAMAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDLQSEFDEQHGKKVPTVSRPYSFIEFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILER 165
           + I   +K YID+R + NL  +N   +     MV  ++ E+L+R
Sbjct: 121 TYIQKTKKLYIDSRARRNLGSINTELQDVQRIMV-ANIEEVLQR 159

[Close]

BLAST of Tan0013459 vs. ExPASy Swiss-Prot
Match: O08595 (Vesicle-trafficking protein SEC22b OS=Cricetulus griseus OX=10029 GN=Sec22b PE=1 SV=3)

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-21
Identity = 57/164 (34.76%), Postives = 96/164 (58.54%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MV LTM+ RV DGLPLA  ++  +E+   D+  Y+ QA+ + ++++  + +   +    M
Sbjct: 1   MVLLTMIARVADGLPLAASMQ-EDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLGAGAM 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
             H   Y++E GVCY+ LC++++P+KLA  YL+ L  EF +     +  + +PYSF  FD
Sbjct: 61  TFH---YIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILER 165
           + I   +K YID+R + NL  +N   +     MV  ++ E+L+R
Sbjct: 121 TFIQKTKKLYIDSRARRNLGSINTELQDVQRIMV-ANIEEVLQR 159

[Close]

BLAST of Tan0013459 vs. ExPASy Swiss-Prot
Match: O08547 (Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3)

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-21
Identity = 58/164 (35.37%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MV LTM+ RV DGLPLA  ++  +E+   D+  Y+ QA+ + ++++    SP++  ++  
Sbjct: 1   MVLLTMIARVADGLPLAASMQ-EDEQSGRDLQQYQSQAKQLFRKLNE--QSPTRCTLE-A 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
              +F Y++E GVCY+ LC++++P+KLA  YL+ L  EF +     +  + +PYSF  FD
Sbjct: 61  GAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILER 165
           + I   +K YID+R + NL  +N   +     MV  ++ E+L+R
Sbjct: 121 TFIQKTKKLYIDSRARRNLGSINTELQDVQRIMV-ANIEEVLQR 159

[Close]

BLAST of Tan0013459 vs. NCBI nr
Match: XP_008439222.1 (PREDICTED: 25.3 kDa vesicle transport protein isoform X1 [Cucumis melo])

HSP 1 Score: 387.9 bits (995), Expect = 6.5e-104
Identity = 199/242 (82.23%), Postives = 215/242 (88.84%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVKLTMVGRVRDGLP+AQGIRYVNEE NDDV GYK+QAEFILKEISRG LSP KM I +M
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEE-NDDVFGYKKQAEFILKEISRGTLSPPKMVI-LM 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
           HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQ LQKEF KFDDALINKLIKPYSF  FD
Sbjct: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKPYSFLKFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSISNTN 180
           SIISN+RKQYIDTRTQ NL KLNANRRQ DPD+++CS  EILERRR +D + ERS  NTN
Sbjct: 121 SIISNVRKQYIDTRTQVNLCKLNANRRQPDPDILSCSFSEILERRRKLDIE-ERSRCNTN 180

Query: 181 SQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLWASFVLFDISLSHHNEFVILYNNRK 240
           SQ  SSSIWGSP+L+EI LKW PMV TF +V ++LWASF+LFDISLSHHN+FVILYNNRK
Sbjct: 181 SQGTSSSIWGSPYLEEIGLKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRK 239

Query: 241 LF 243
           LF
Sbjct: 241 LF 239

[Close]

BLAST of Tan0013459 vs. NCBI nr
Match: XP_011651150.1 (25.3 kDa vesicle transport protein isoform X1 [Cucumis sativus] >KGN57371.1 hypothetical protein Csa_011539 [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 1.6e-102
Identity = 200/244 (81.97%), Postives = 215/244 (88.11%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVKLTMVGRVRDGLP+AQGIRYVNEE NDDV GYK+QAEFILKEISRG LSP KM I +M
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEE-NDDVFGYKKQAEFILKEISRGTLSPPKMVI-LM 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
           HHHSFIYLVENGVCYMTLCDSSYPRKLA+HYLQ LQKEF KFDDALINKLIKPYSF  FD
Sbjct: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSIS--N 180
           SIISN+RKQYIDTRTQANL KLNANRRQ DPD+ TCSL EILERRR  D  VERS S  N
Sbjct: 121 SIISNVRKQYIDTRTQANLSKLNANRRQPDPDISTCSLSEILERRRKFD-MVERSRSNNN 180

Query: 181 TNSQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLWASFVLFDISLSHHNEFVILYNN 240
           TNS+  S SIWGSP+L+EI +KW PMV TF +V ++LWASF+LFDISLSHHN+FVILYNN
Sbjct: 181 TNSEGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNN 240

Query: 241 RKLF 243
           RKLF
Sbjct: 241 RKLF 241

[Close]

BLAST of Tan0013459 vs. NCBI nr
Match: XP_038875892.1 (25.3 kDa vesicle transport protein [Benincasa hispida])

HSP 1 Score: 377.9 bits (969), Expect = 6.7e-101
Identity = 199/243 (81.89%), Postives = 214/243 (88.07%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVKLTMVGRVRDGLP+AQGIRY+NEE NDDVLGYK+QAEFILKEISRG LS SKMAI +M
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYINEE-NDDVLGYKKQAEFILKEISRGTLSSSKMAI-LM 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
           HHH FIYLVENGVCYMTLCDSSYPRKLALHYLQ LQKE  +F+ ALINKLIKPYS   FD
Sbjct: 61  HHHCFIYLVENGVCYMTLCDSSYPRKLALHYLQDLQKEVGEFEYALINKLIKPYSLTQFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSI-SNT 180
            IISNIRKQYIDTRTQANL KLNANRRQ DPDM+TCSL EILERRR +D  VERS+ +NT
Sbjct: 121 GIISNIRKQYIDTRTQANLCKLNANRRQADPDMLTCSLSEILERRRKLD-MVERSMCNNT 180

Query: 181 NSQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLWASFVLFDISLSHHNEFVILYNNR 240
           NSQ  SSSIWGSP L+EI LKW PMV TF +V ++LWASF+LFDISLS HNEFVILYNNR
Sbjct: 181 NSQGASSSIWGSPCLQEIGLKWTPMVVTFGVVLIILWASFLLFDISLSQHNEFVILYNNR 240

Query: 241 KLF 243
           KLF
Sbjct: 241 KLF 240

[Close]

BLAST of Tan0013459 vs. NCBI nr
Match: XP_022968542.1 (25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 370.2 bits (949), Expect = 1.4e-98
Identity = 192/242 (79.34%), Postives = 209/242 (86.36%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVKLTMVGRVRDG+PLAQGIRYVNEE NDDVLGYKQQAEFILKEISRGALS  KMAIQ M
Sbjct: 1   MVKLTMVGRVRDGVPLAQGIRYVNEE-NDDVLGYKQQAEFILKEISRGALSSPKMAIQ-M 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
           HHHSFIYL+ENGVCYMTLCDS YPRKLA+HYLQ LQ+EFSKFDDAL+N L+KPYSF  FD
Sbjct: 61  HHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFPKFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSISNTN 180
           +IISNIRK+YIDTRTQ NLYKLN +R QTD D+VTCS+ EI ERRR +   VERSI N N
Sbjct: 121 NIISNIRKRYIDTRTQVNLYKLNDSRSQTDLDIVTCSISEIFERRRKITDMVERSICNAN 180

Query: 181 SQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLWASFVLFDISLSHHNEFVILYNNRK 240
               SSSIW   F+KEI LKW P+V TF +V VLLWASF+LFDISLSHHN+FVILYNNRK
Sbjct: 181 ----SSSIWSFSFVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRK 236

Query: 241 LF 243
           LF
Sbjct: 241 LF 236

[Close]

BLAST of Tan0013459 vs. NCBI nr
Match: XP_022944814.1 (25.3 kDa vesicle transport protein isoform X1 [Cucurbita moschata])

HSP 1 Score: 368.6 bits (945), Expect = 4.1e-98
Identity = 190/242 (78.51%), Postives = 206/242 (85.12%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVKLTMVGRVRDG+PLAQGIRYVNEE NDDVLGYKQQAEFILKEISRGALSP KM IQ M
Sbjct: 44  MVKLTMVGRVRDGVPLAQGIRYVNEE-NDDVLGYKQQAEFILKEISRGALSPPKMVIQ-M 103

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
           HHHSFIYL+ENGVCYMTLCDS YPRKLA+HYLQ LQ+EFSKFDDAL+N L+KPYSF  FD
Sbjct: 104 HHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFD 163

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSISNTN 180
           +II NIRK+YIDTRTQ NLYKLN  R QTD DMVTCS +EI ERRR +  + ERSI N N
Sbjct: 164 NIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNAN 223

Query: 181 SQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLWASFVLFDISLSHHNEFVILYNNRK 240
               SSSIW    +KEI LKW P+V TF +V VLLWASF+LFDISLSHHN+FVILYNNRK
Sbjct: 224 ----SSSIWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRK 279

Query: 241 LF 243
           LF
Sbjct: 284 LF 279

[Close]

BLAST of Tan0013459 vs. ExPASy TrEMBL
Match: A0A1S3AYX3 (25.3 kDa vesicle transport protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484073 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.1e-104
Identity = 199/242 (82.23%), Postives = 215/242 (88.84%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVKLTMVGRVRDGLP+AQGIRYVNEE NDDV GYK+QAEFILKEISRG LSP KM I +M
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEE-NDDVFGYKKQAEFILKEISRGTLSPPKMVI-LM 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
           HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQ LQKEF KFDDALINKLIKPYSF  FD
Sbjct: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKPYSFLKFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSISNTN 180
           SIISN+RKQYIDTRTQ NL KLNANRRQ DPD+++CS  EILERRR +D + ERS  NTN
Sbjct: 121 SIISNVRKQYIDTRTQVNLCKLNANRRQPDPDILSCSFSEILERRRKLDIE-ERSRCNTN 180

Query: 181 SQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLWASFVLFDISLSHHNEFVILYNNRK 240
           SQ  SSSIWGSP+L+EI LKW PMV TF +V ++LWASF+LFDISLSHHN+FVILYNNRK
Sbjct: 181 SQGTSSSIWGSPYLEEIGLKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRK 239

Query: 241 LF 243
           LF
Sbjct: 241 LF 239

[Close]

BLAST of Tan0013459 vs. ExPASy TrEMBL
Match: A0A0A0LBE2 (Longin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182070 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.8e-103
Identity = 200/244 (81.97%), Postives = 215/244 (88.11%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVKLTMVGRVRDGLP+AQGIRYVNEE NDDV GYK+QAEFILKEISRG LSP KM I +M
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEE-NDDVFGYKKQAEFILKEISRGTLSPPKMVI-LM 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
           HHHSFIYLVENGVCYMTLCDSSYPRKLA+HYLQ LQKEF KFDDALINKLIKPYSF  FD
Sbjct: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSIS--N 180
           SIISN+RKQYIDTRTQANL KLNANRRQ DPD+ TCSL EILERRR  D  VERS S  N
Sbjct: 121 SIISNVRKQYIDTRTQANLSKLNANRRQPDPDISTCSLSEILERRRKFD-MVERSRSNNN 180

Query: 181 TNSQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLWASFVLFDISLSHHNEFVILYNN 240
           TNS+  S SIWGSP+L+EI +KW PMV TF +V ++LWASF+LFDISLSHHN+FVILYNN
Sbjct: 181 TNSEGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNN 240

Query: 241 RKLF 243
           RKLF
Sbjct: 241 RKLF 241

[Close]

BLAST of Tan0013459 vs. ExPASy TrEMBL
Match: A0A6J1HTS6 (25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467744 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.8e-99
Identity = 192/242 (79.34%), Postives = 209/242 (86.36%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVKLTMVGRVRDG+PLAQGIRYVNEE NDDVLGYKQQAEFILKEISRGALS  KMAIQ M
Sbjct: 1   MVKLTMVGRVRDGVPLAQGIRYVNEE-NDDVLGYKQQAEFILKEISRGALSSPKMAIQ-M 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
           HHHSFIYL+ENGVCYMTLCDS YPRKLA+HYLQ LQ+EFSKFDDAL+N L+KPYSF  FD
Sbjct: 61  HHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFPKFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSISNTN 180
           +IISNIRK+YIDTRTQ NLYKLN +R QTD D+VTCS+ EI ERRR +   VERSI N N
Sbjct: 121 NIISNIRKRYIDTRTQVNLYKLNDSRSQTDLDIVTCSISEIFERRRKITDMVERSICNAN 180

Query: 181 SQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLWASFVLFDISLSHHNEFVILYNNRK 240
               SSSIW   F+KEI LKW P+V TF +V VLLWASF+LFDISLSHHN+FVILYNNRK
Sbjct: 181 ----SSSIWSFSFVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRK 236

Query: 241 LF 243
           LF
Sbjct: 241 LF 236

[Close]

BLAST of Tan0013459 vs. ExPASy TrEMBL
Match: A0A6J1FZ74 (25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449240 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.0e-98
Identity = 190/242 (78.51%), Postives = 206/242 (85.12%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVKLTMVGRVRDG+PLAQGIRYVNEE NDDVLGYKQQAEFILKEISRGALSP KM IQ M
Sbjct: 44  MVKLTMVGRVRDGVPLAQGIRYVNEE-NDDVLGYKQQAEFILKEISRGALSPPKMVIQ-M 103

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
           HHHSFIYL+ENGVCYMTLCDS YPRKLA+HYLQ LQ+EFSKFDDAL+N L+KPYSF  FD
Sbjct: 104 HHHSFIYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKPYSFLKFD 163

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSISNTN 180
           +II NIRK+YIDTRTQ NLYKLN  R QTD DMVTCS +EI ERRR +  + ERSI N N
Sbjct: 164 NIIINIRKRYIDTRTQVNLYKLNDGRGQTDLDMVTCSFFEIFERRRKITDRAERSICNAN 223

Query: 181 SQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLWASFVLFDISLSHHNEFVILYNNRK 240
               SSSIW    +KEI LKW P+V TF +V VLLWASF+LFDISLSHHN+FVILYNNRK
Sbjct: 224 ----SSSIWSFSIVKEIGLKWTPVVVTFGVVLVLLWASFLLFDISLSHHNQFVILYNNRK 279

Query: 241 LF 243
           LF
Sbjct: 284 LF 279

[Close]

BLAST of Tan0013459 vs. ExPASy TrEMBL
Match: A0A6J1CIZ8 (LOW QUALITY PROTEIN: 25.3 kDa vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111011599 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 5.8e-82
Identity = 167/241 (69.29%), Postives = 190/241 (78.84%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVKLT+VGR+RDGLPLAQGI Y NEE NDDVLGYKQQAEFILK ISRGA SPSKMAI ++
Sbjct: 1   MVKLTIVGRLRDGLPLAQGIGYFNEE-NDDVLGYKQQAEFILKHISRGAFSPSKMAI-LI 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
           HH  FIYLVENGVC +TLCDSSYPRKLALHYLQ LQKE +KFDDALIN L KP SF  FD
Sbjct: 61  HHQCFIYLVENGVCCITLCDSSYPRKLALHYLQDLQKELAKFDDALINXLTKPNSFAKFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSISNTN 180
            IISNIRK+YIDTRTQANL+KLNAN     PD+VTCSL+EILER+++   ++  ++    
Sbjct: 121 RIISNIRKRYIDTRTQANLHKLNANPXLRCPDIVTCSLFEILERKKLAKQRISLNVGCC- 180

Query: 181 SQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLWASFVLFDISLSHHNEFVILYNNRK 240
                         +  A+KW+PMV TF +V ++LWASFVLF ISLSHHNEFVILYNNRK
Sbjct: 181 -------------CQATAVKWVPMVVTFGVVLLILWASFVLFHISLSHHNEFVILYNNRK 225

Query: 241 L 242
           L
Sbjct: 241 L 225

[Close]

BLAST of Tan0013459 vs. TAIR 10
Match: AT5G52270.1 (SNARE-like superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 3.0e-46
Identity = 101/169 (59.76%), Postives = 126/169 (74.56%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVKLT+VGRV DGLPLAQ   YVN+E N   L YKQQAEF+LK++S+ +L   KM I ++
Sbjct: 1   MVKLTIVGRVEDGLPLAQDQTYVNQEDNTSFLLYKQQAEFLLKQVSKDSLLHPKMTI-LL 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDD-ALINKLIKPYSFRIF 120
            HHSF +LVE  +CY+ L DSSYPRKL  +YLQ+L KE  K D+ ALI K+ KPYSF  F
Sbjct: 61  DHHSFHFLVEKKICYIALSDSSYPRKLLFNYLQNLNKELDKLDEKALIQKISKPYSFIRF 120

Query: 121 DSIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIM 169
             II  IRKQYIDTRTQANL KLNA R+Q + D+VT  L +I++R++I+
Sbjct: 121 GKIIGRIRKQYIDTRTQANLSKLNALRKQ-ELDVVTEHLNDIIQRQQIL 167

[Close]

BLAST of Tan0013459 vs. TAIR 10
Match: AT1G11890.1 (Synaptobrevin family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-31
Identity = 77/216 (35.65%), Postives = 122/216 (56.48%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGLPLAQGIRYVNEELNDDVLGYKQQAEFILKEISRGALSPSKMAIQIM 60
           MVK+T++ RV DGLPLA+G+    +  + D+  YKQQ + + K +SRG    S+M+++  
Sbjct: 1   MVKMTLIARVTDGLPLAEGLDDGRDLPDSDM--YKQQVKALFKNLSRGQNDASRMSVE-T 60

Query: 61  HHHSFIYLVENGVCYMTLCDSSYPRKLALHYLQHLQKEFSKFDDALINKLIKPYSFRIFD 120
             + F Y++E  VCY+T+CD SYP+KLA  YL+ L+ EF + +   I    +PY+F  FD
Sbjct: 61  GPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFD 120

Query: 121 SIISNIRKQYIDTRTQANLYKLNANRRQTDPDMVTCSLYEILERRRIMDHKVERSISNTN 180
           + I   +K Y DTRTQ N+ KLN    +    ++T ++ E+L     +D   E S   T+
Sbjct: 121 TFIQKTKKLYQDTRTQRNIAKLNDELYEVH-QIMTRNVQEVLGVGEKLDQVSEMSSRLTS 180

Query: 181 SQPVSSSIWGSPFLKEIALKWMPMVATFALVFVLLW 217
              + +        + +  KW P+   F +VF+L W
Sbjct: 181 ESRIYADKAKDLNRQALIRKWAPVAIVFGVVFLLFW 212

The following BLAST results are available for this feature:

BLAST of Tan0013459 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AU2	3.8e-30	35.65	25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2...	[more]
Q7SXP0	2.9e-22	34.25	Vesicle-trafficking protein SEC22b-B OS=Danio rerio OX=7955 GN=sec22bb PE=2 SV=1	[more]
Q5ZJW4	8.5e-22	35.98	Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1	[more]
O08595	2.5e-21	34.76	Vesicle-trafficking protein SEC22b OS=Cricetulus griseus OX=10029 GN=Sec22b PE=1...	[more]
O08547	2.5e-21	35.37	Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3	[more]

BLAST of Tan0013459 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439222.1	6.5e-104	82.23	PREDICTED: 25.3 kDa vesicle transport protein isoform X1 [Cucumis melo]	[more]
XP_011651150.1	1.6e-102	81.97	25.3 kDa vesicle transport protein isoform X1 [Cucumis sativus] >KGN57371.1 hypo...	[more]
XP_038875892.1	6.7e-101	81.89	25.3 kDa vesicle transport protein [Benincasa hispida]	[more]
XP_022968542.1	1.4e-98	79.34	25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima]	[more]
XP_022944814.1	4.1e-98	78.51	25.3 kDa vesicle transport protein isoform X1 [Cucurbita moschata]	[more]

BLAST of Tan0013459 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AYX3	3.1e-104	82.23	25.3 kDa vesicle transport protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0LBE2	7.8e-103	81.97	Longin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182070 PE=3...	[more]
A0A6J1HTS6	6.8e-99	79.34	25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FZ74	2.0e-98	78.51	25.3 kDa vesicle transport protein isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1CIZ8	5.8e-82	69.29	LOW QUALITY PROTEIN: 25.3 kDa vesicle transport protein OS=Momordica charantia O...	[more]

BLAST of Tan0013459 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52270.1	3.0e-46	59.76	SNARE-like superfamily protein	[more]
AT1G11890.1	2.7e-31	35.65	Synaptobrevin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..44
None	No IPR available	GENE3D	3.30.450.50	Longin domain	coord: 1..131 e-value: 3.1E-34 score: 119.6
None	No IPR available	PANTHER	PTHR45837:SF7	SNARE-LIKE SUPERFAMILY PROTEIN	coord: 1..223
IPR010908	Longin domain	SMART	SM01270	Longin_2	coord: 37..122 e-value: 6.8E-15 score: 65.5
IPR010908	Longin domain	PFAM	PF13774	Longin	coord: 38..120 e-value: 1.0E-16 score: 60.7
IPR010908	Longin domain	PROSITE	PS50859	LONGIN	coord: 6..123 score: 19.878963
IPR010908	Longin domain	CDD	cd14824	Longin	coord: 5..130 e-value: 3.68531E-22 score: 86.1557
IPR044565	Vesicle-trafficking protein Sec22	PANTHER	PTHR45837	VESICLE-TRAFFICKING PROTEIN SEC22B	coord: 1..223
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013459.1	Tan0013459.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
biological_process	GO:0048280	vesicle fusion with Golgi apparatus
cellular_component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031201	SNARE complex
molecular_function	GO:0005484	SNAP receptor activity